TCONS_00010042 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010042
Unique NameTCONS_00010042
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length163

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010042 ID=TCONS_00010042|Name=TCONS_00010042|organism=Clytia hemisphaerica|type=transcript|length=163bp
GGGAAAATAACACTTCATCGTTTCTCAATAATAAACATTActttaaaaaa
cacaaaaaactttACAGTAATAAACAATAGAGAATGTCACATATTTAAAT
AGAAATTCAACCTAAAAAATTGTTAGAACAAAAATGTGGGATCAAGCTAC
GACAGTGTGATTG
Run BLAST on NCBI

transcript from alignment at sc0000101:156919..157081

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010042 ID=TCONS_00010042|Name=TCONS_00010042|organism=Clytia hemisphaerica|type=transcript|length=163bp|location=Sequence derived from alignment at sc0000101:156919..157081 (Clytia hemisphaerica)
CAATCACACTGTCGTAGCTTGATCCCACATTTTTGTTCTAACAATTTTTT
AGGTTGAATTTCTATTTAAATATGTGACATTCTCTATTGTTTATTACTGT
aaagttttttgtgttttttaaagTAATGTTTATTATTGAGAAACGATGAA
GTGTTATTTTCCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005630XLOC_005630Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010042-exon-sc0000101-1491911889:156919..157081TCONS_00010042-exon-sc0000101-1491911889:156919..157081Clytia hemisphaericaexon
TCONS_00010042-exon-sc0000101-1510915933:156919..157081TCONS_00010042-exon-sc0000101-1510915933:156919..157081Clytia hemisphaericaexon
TCONS_00010042-exon-sc0000101-1575043694:156919..157081TCONS_00010042-exon-sc0000101-1575043694:156919..157081Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000101supercontigsc0000101:156919..157081 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00010042 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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