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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010035 ID=TCONS_00010035|Name=TCONS_00010035|organism=Clytia hemisphaerica|type=transcript|length=390bp
TGTATTTTGTTAGTGAACATAAAGAAATACAAAGatgtaataaatataat
ataataataacaataaagaCTAATCACAAACGAGAGGAGagaaggtttca
aaaaaaattataatgtcAGCATATATGGAATCTTCGCCACTGCCTTCTGA
TTGATTCAACCGCAGGGAATGCTTATCCACCAGCAAGCTTTTGGATCGTT
TGAATTTTTCTCTAAGAATAGACGATATCATCAGCTTCTTTCTCTTCAAA
CATGTCTTCACCACCAGATTCTTTAGTTTTGGTTTTTCCTTGTTGCTCAC
AAACTTCTTTANactctggatcaaaaaaagattttaagatcgcgatttta
ccaaaatgaaatccagtaacttttcttccactttgactga Run BLAST on NCBI transcript from alignment at sc0000101:557565..561081- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010035 ID=TCONS_00010035|Name=TCONS_00010035|organism=Clytia hemisphaerica|type=transcript|length=3517bp|location=Sequence derived from alignment at sc0000101:557565..561081- (Clytia hemisphaerica)
TGTATTTTGTTAGTGAACATAAAGAAATACAAAGATGTAATAAATATAAT
ATAATAATAACAATAAAGACTAATCACAAACGAGAGGAGAGAAGGTTTCA
AAAAAAATTATAATGTCAGCATATATGGAATCTTCGCCACTGCCTTCTGA
TTGATTCAACCGCAGGGAATGCTTATCCACCAGCAAGCTTTTGGATCGTT
TGAATTTTTCTCTAAGAATAGACGATATCATCAGCTTCTTTCTCTTCAAA
CATGTCTTCACCACCAGAGTCTAGGAATACACAAATCATAATATGCTTTT
ATTACTGTCTAGCATGTTAGGTCAGAGTAGTGAGTGAGGTATAGATAACC
TGAGAGCAGATCGTTATTGTTTTCCGCATACCACGTTAAAGCTCTAAAGA
TTCAAGATTCAAGCTTCGCTTCACCATAATCCATATAAAAAACCCGGTCT
GGAAGCCTTTTGTTTCTTTCCATTGTTTCTTACTTGAGCTTGCGTTTCGG
ATATTAGTTTGTTTTGCTCGCTTTTTGATCATGTGATTAAATCTTAAACC
AATCCCAAGAGGAATACTTGGTAACGATCAAAAACTGAGCAATTCGACTT
TGATCTTTTGATATTAACAAAGGAAAAAGCCGAGGGGTAAATCACTTGAA
AAAAGGTGTACGATACTTTTTGACTTTTTGAATTTCCATTTGACTTTTTG
ACTTTTTTTTGACTTTTAGTTGACTTTTTGACTTTTTTTTGACTTTTTTC
AAACTTTCATTTTGACTTTTGCCGACAAAAACGCCAACCGCCTTCGGGCG
CCCAACATTTTCCGCCCAAATCTGTCCAAAAACGCCAACCGCCCATAAAT
TTTGCTTCACCCATCTGCCCATTCAAGAAACTTTTTGACTTTTTTAAGAC
TTTTTTTTGACTTTTTGACTTTTTTTCTAAGAATTTTTGACTTTTTCTTT
GACTTTTTGACTTTATTTTTGACTTTTTGACTTTTTCTTTGACTTTTTGA
CTTTTTTTTTGACTTTTTTAACTTTTTTTTTGACTTTTTCTAGAGGTGTA
CGATAATTTTTCGAGTGATTTACCCCTCGGAAAAAGCTATCAAAAAGTTA
AAACAATAAGCTTCCAGACCAGTGTTTTTTATAAGGACTAGGGCTTCACG
TAGTCAGTTAAGTCATTTTGATGATATCTAAAGATATATAAAAAGCTGCT
TGCTGATCTAGCGAAAGCAATACAATAGACCTTTTCATAAATTACGTCAC
AAACATCACTTGCCTCATATTCAAACAATTACCATGGTGATTATGTCCCT
TGAGACAATAAGTGATTTTTTTATGAATAGAAAGTAGTTTTGATAAAATC
CGCTGGGAGTTAATCACCATTGCAATAATTTTGAAACAAGGCAACTGTTG
TTCGTAACATAATTTATGAAAAGATTTATTATCAACTTACAGTATGTGGC
CCCCAAAACGGCGATAAGATTTAAAAATTTTTCTTGCCTGCAAAACTTTA
ACATCTCTACTTTATTTCCCGACAGTTCTTTTTCAAAATTTTCAATTTCA
ACAATATTTTTCAATTGCTTAAAGATAGGTAGCTTTTTTTTGATGGCCTC
CAAAACGGAGGTTTGCAATTTTAGCGATTTCTCGAGATATCTTTAAGATA
ATAATACAAAATTTTGACCATAGTTTTGAAATGTGATTTAGAGGGTTTTG
GGCATAAATTTGTTTGATAAACTTTTTACAGTATACCCCTGGTTGTCAAA
ATGCAGGTTTGGGGCCCCCAATNCTTTTTTTCTAAGAATTTTTGACTTTT
TCTTTGACTTTTTGACTTTATTTTTGACTTTTTGACTTTTTCTTTGACTT
TTTGACTTTTTTTTTGACTTTTTTAACTTTTTTTTTGACTTTTTCTAGAG
GTGTACGATAATTTTTCGAGTGATTTACCCCTCGGAAAAAGCTATCAAAA
AGTTAAAACAATAAGCTTCCAGACCAGTGTTTTTTATAAGGACTAGGGCT
TCACGTAGTCAGTTAAGTCATTTTGATGATATCTAAAGATATATAAAAAG
CTGCTTGCTGATCTAGCGAAAGCAATACAATAGACCTTTTCATAAATTAC
GTCACAAACATCACTTGCCTCATATTCAAACAATTACCATGGTGATTATG
TCCCTTGAGACAATAAGTGATTTTTTTATGAATAGAAAGTAGTTTTGATA
AAATCCGCTGGGAGTTAATCACCATTGCAATAATTTTGAAACAAGGCAAC
TGTTGTTCGTAACATAATTTATGAAAAGATTTATTATCAACTTACAGTAT
GTGGCCCCCAAAACGGCGATAANNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGT
AAAAGTTTCAGCTGAATTTAAAAAACTGGGCAGGATATAATTAAAATCTT
AAGAATTTTAACCTTACCTACTTCAAAGAAGTTAAAGTCACCCATAGCTT
TTAAATTTTGAAAAAATAATTTCGATACTATGTTCCCAATAATTGAACTA
AAAAAGTGTCTTGGGATTTTTTTTGGAATTGACATTAACTCTTTAAATCC
TAAATTCTGTAAAAATATCGATAAAAAAGTAAATTTAAATGTGTGTTTTT
CAGTTATCTGTAAATTGAGGAAAAACAACTCAGTTAGAAATAAAATCCTA
AGACACTTTTTAAGTTTGATCTTTTGGGAATCTCACNAAATAAACAAAAA
TCGTTTAATTCTGATAAATCTACAAGTCGCAATCCTCATTTTAATGACAA
CCTCCGTTTTGGGGGCCGTCTCCGTTTTGGGGGCCATATACTGTACATGA
TATGATTGTTCCAACCTTATCTTCACATTTGAGATACTTAAAGACATCCT
CTTAGCGGATATAAATCATTGACCATTGTAAGACAAGTATCTTCCGGTTT
TGATATGATATATGGTATGAATCAGATTCCATACTGATTTTTTTTTTATT
CTTGTTCAAATCAATTTCGATGTACAAGTTATTTTCTCTTCAATCTTATA
ATCTATTCATAAGTATTATTAGTTCTAAAGGAGATTGACTATATCAAAGA
GGTAAGGTTTTAAATAGAATAGAACTCAGATTCACATACCTTTAGTTCTT
TAGTTTTGGTTTTTCCTTGTTGCTCACAAACTTCTTTANACTCTGGATCA
AAAAAAGATTTTAAGATCGCGATTTTACCAAAATGAAATCCAGTAACTTT
TCTTCCACTTTGACTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010035-exon-sc0000101-1575043694:560814..561081 | TCONS_00010035-exon-sc0000101-1575043694:560814..561081 | Clytia hemisphaerica | exon |
| TCONS_00010035-exon-sc0000101-1575043694:557565..557686 | TCONS_00010035-exon-sc0000101-1575043694:557565..557686 | Clytia hemisphaerica | exon |
| TCONS_00010035-exon-sc0000101-1510915933:560814..561081 | TCONS_00010035-exon-sc0000101-1510915933:560814..561081 | Clytia hemisphaerica | exon |
| TCONS_00010035-exon-sc0000101-1510915933:557565..557686 | TCONS_00010035-exon-sc0000101-1510915933:557565..557686 | Clytia hemisphaerica | exon |
| TCONS_00010035-exon-sc0000101-1491911889:560814..561081 | TCONS_00010035-exon-sc0000101-1491911889:560814..561081 | Clytia hemisphaerica | exon |
| TCONS_00010035-exon-sc0000101-1491911889:557565..557686 | TCONS_00010035-exon-sc0000101-1491911889:557565..557686 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000101 | supercontig | sc0000101:557565..561081 - |
Blast
The following BLAST results are available for this feature:
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