TCONS_00009904 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009904
Unique NameTCONS_00009904
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1190

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009904 ID=TCONS_00009904|Name=TCONS_00009904|organism=Clytia hemisphaerica|type=transcript|length=1190bp
GCTCATTACTTAATGTTGTAGTTTTACGGGGGTATAAAAAGGACCAACAT
GCAGCCATTAGAATCACATTCAAACGTGAAGAATCAGAATCTTCAGTCAG
CAAGTGGAAACAAACTTTAAAGATTGTTTTAAATATACACATTCATGATG
GGTAGAATTTCTATAATTGTATTCTTCTGCATTATTGCAGTGACAATCAT
TGAAGCGAAGAAATCTTTGACATGTGATGAATATATTGCTGGAAATCCTA
TGCAAGTGTGTGtTGATGGATACATCTTTGAGCGAAATGATGAGGTAGGG
GTGACATGGGTGGAAGCAGAATTTgacgtttgccgaaaaaaaggAGGTCA
TTTAGCTTCCGTTACAAGTGATGATCAAGTGGTAGCTATGGAGATGCTCC
TTCCTACAGGTGAACAAGCATGGCTTGGTACAGAAGTAGTGATGGGAACC
GGTCCCTTCAATAATGATAAAACAGAAGTACCTATGGACGTATCAGCACA
AATAACGACGGCAGGAAACGCACTAGTTATTGGAGATGGAAACGGGGCAA
TTACTGATTTAGGCGAACTTAATCCAATTTCTACAGATGTCAATCATTTC
TTTTGCAAATACAATTATTTCCATAacaggaaaatttattttggattTCC
TGTCACAGGCATGACCCAACCTGATACTGCTACAGAATGTGAAATGCTTG
GTGAACCTAAGGATGGACGTATTATTCAAATCGATAGTGGAAAACTTCAA
AACTTCGTGAATGCAGAAGTTGACCGATTAGTTGAGAAGGCAGATCCTGA
GGAATATTTGTTTTGGATAAACATGAAATACAGCGAAACGACCATGAAAT
ACAAGTGGGGTGTTGAAGGGACTTATTCACCTTTCCGTAAATGGTGTACC
GCACAACCAGACGATGAAGTGATAGAGGCAGATGATCGTTGTGTAGCTTT
GACTGGTTCTGGATGTTGGAAAGTTTATGCTTGTAGTATGGCATCCGATA
CTATAACCGCTACTGATACTACAATCAATCCTTTTCTTACTATGTGCGAG
TTCGATATCCGTGAGTCAAACCCAACCAACCATGAATTATTCACTTTGAT
TCAAGTTTTAAGATCAAATGTCAATGAAATCACTAAAGATTGTAAACGAT
GCAAAGGTGTTGAATAGAACTATAAAACTTTTCTTTCCTG
Run BLAST on NCBI

protein sequence of TCONS_00009904-protein

>TCONS_00009904-protein ID=TCONS_00009904-protein|Name=TCONS_00009904-protein|organism=Clytia hemisphaerica|type=polypeptide|length=340bp
MMGRISIIVFFCIIAVTIIEAKKSLTCDEYIAGNPMQVCVDGYIFERNDE
VGVTWVEAEFDVCRKKGGHLASVTSDDQVVAMEMLLPTGEQAWLGTEVVM
GTGPFNNDKTEVPMDVSAQITTAGNALVIGDGNGAITDLGELNPISTDVN
HFFCKYNYFHNRKIYFGFPVTGMTQPDTATECEMLGEPKDGRIIQIDSGK
LQNFVNAEVDRLVEKADPEEYLFWINMKYSETTMKYKWGVEGTYSPFRKW
CTAQPDDEVIEADDRCVALTGSGCWKVYACSMASDTITATDTTINPFLTM
CEFDIRESNPTNHELFTLIQVLRSNVNEITKDCKRCKGVE
Run BLAST on NCBI

transcript from alignment at sc0000100:159522..164039+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009904 ID=TCONS_00009904|Name=TCONS_00009904|organism=Clytia hemisphaerica|type=transcript|length=4518bp|location=Sequence derived from alignment at sc0000100:159522..164039+ (Clytia hemisphaerica)
GCTCATTACTTAATGTTGTAGTTTTACGGGGGTATAAAAAGGACCAACAT GCAGCCATTAGAATCACATTCAAACGTGAAGAATCAGAATCTTCAGTCAG CAAGTGGAAACAAACTTTAAAGATTGTTTTAAATATACACATTCATGATG GGTAGAATTTCTATAATTGTATTCTTCTGCATTATTGCAGTGACAATCAT TGAAGCGAAGAAATCTTTGACATGTGATGAATATATTGCTGGAAATCCTA TGCAAGTGTGTGGTATGTAAATCAATTAACTCAANATATTGCTGGAAATC CTATGCAAGTGTGTGGTATGTAAATCATTTAACTAGGAGTAGTAGACGTA GAAAAATTAGGAAATAGGAAACAATTATTCTTGAAGAAAGCTTTACTTAA AACAACTTTTGTTCAGTAGCGTTCtggcttgtttttttttggggtGCCCA CTGCAAATTCGTTTCCATGTATGTTTTGAAGGAGTTCAGTCCTTTAGTAC CTACTTCCTTCACAATATTACTTCAGAATAAATAATGTAGAATCATTACT TTCAATAATTACCAATTTTTGACGcttctttttatcttttagtTGATGGA TACATCTTTGAGCGAAATGATGAGGTAGGGGTGACATGGGTGGAAGCAGA ATTTgacgtttgccgaaaaaaaggAGGTCATTTAGCTTCCGTTACAAGTG ATGATCAAGTGGTAGCTATGGAGATGCTCCTTCCTACAGGGTAATTTTTG AGATGAACCCTTAAAAAGTTACATTCAAATCTACTTGTTATATTCTGAGA TAAcactctttcattgaatattttttatgcGTTTTCTCATTGCGATTTAG TTGGTTTAGTGAAAGCGGATAAAACATAACGTAATGACTCCAAAAAACAT TACATAATCCTATATAGCGACCAATAAAGATAACAAATATTTTGCAGATA ATTTTTTGAGTCGAAAAGGTGACTATCAAACATTTGCCCTtaatatttta tccaaaaaggCCTTTTGTTGTAGTAATAGATATACCCACACTTCAAATTA CCTTGAGGGAAATTAATTTTTACgggaaatcaaattttttcccgGTTTTA CGAATTAcaaatttggctgtttttctttaataaatttgaaaaattagggC TAAATTAAAggaaatttgtccaaaatagGGCCGAACTCTGAAAATATATG ACCGcgaaatgccattttttcaaactttctttcgCCCACGAAAATTAATT CCAGCCAGAATTAGTTAAGTTAAGGTAGGTTTCAATAAATTTCTGAAATG CACTTCTCCTTCCTTTAGTGAACAAGCATGGCTTGGTACAGAAGTAGTGA TGGGAACCGGTCCCTTCAATAATGATAAAACAGAAGTACCTATGGACGTA TCAGCACAAATAACGACGGCAGGAAACGCACTAGTTATTGGAGATGGAAA CGGGGCAATTACTGATTTAGGCGAACTTAATCCAATTTCTACAGATGTCA ATCATTTCTTTTGCAAATACAATTATTTCCATAacaggaaaatttatttt ggattTCCTGTCACAGGTATTTTATAAGGAAATTATAGGTTTTGCTGACt ctaaaaagaacaaaaacaattaaaaaatggcgaaaataagaatatattaa aaatatctttagacttaaaactaaAAACAGTTAATATAATAACATCTCGa ggctttaaagatttttaatgtTGTTGTAAAATAACGTGTATagttatata tttattttctttggcAGGCATGACCCAACCTGATACTGCTACAGAATGTG AAATGCTTGGTGAACCTAAGGATGGACGTATTATTCAAATCGATAGTGGA AAACTTCAAAACTTCGTGAATGCAGAAGTTGACCGATTGTAAGGAGAATT AACTCTCATCGCTAATCCAAGGCTNATGCAGAAGTTGACCGATTGTAAGT AGAATTAACTCTCATCGCTAATCCAAGGCTGGAAGCATTCAGTTTAAATC CCGAatggctagagtagaatctctaacctttctcaggaaAGATAAAGTAA AACCACTTATTTGACATCCAGAACCCACCTAGAACGCAGTGGAATCATAA CAACGGATTGTATCTaatggtttctttgtttttgaggactacattttttt ttatcaaaacttaagtggcttcatttctacacccctgtgtcacagacccg gtggaccccccatcccggtggaaaaataggccaaaaaatcgtttCCGGTT GAAAGAATATCCTacattttcaaccccactgcgaaattgttgatgatttt atccccattgaaaactgaatgtaaaaagctgcattccaaaaccatcccca ctgaaattttcgagctggaaagaatagattttctatccccattggcattt tgatagaaattttcatccccactgagggaaaaagttctaccgggcactga gacaggggtgtccactggaaacccttcccactggaaaaattggcaaaaat atcatCCCCAGTAGAAAATTATACACTaacttttgtccccactgaaaata atcagataagccattcctcactgcaaattattgtgctattttttccgtCT CCACTGATTTTTCTGgctaaaaaacaatagaattcaaatccccagccatg aaAAAAACATGGAAATGTCAATTtccatcgagttttggttcACTATTTTT ATTCCCAATGGCTGAAAAAACCCAACCAGGTCTGTGGGAAGGGGGTGTTT AAATTCTCCTTAAAAACTCTTCTcggaatcaattaccatagcaatagtTT GGAAACGAGGTTATCGTTGCTCaggacgtaatttatgaaaaggtctattc actCGATTACAATAATTTAAACTACATACTCATTTATTAAAACATAATTT GTTCATTGAATACCATAGAGTTGAGAAGGCAGATCCTGAGGAATATTTGT TTTGGATAAACATGAAATACAGCGAAACGACCATGAAATACAAGTGGGGT GTTGAAGGGACTTATTCACCTTTCCGTAAATGGTGTACCGGTAAGTCTaa tcaaatacacgtttttataagaacaaacttatTAAGAACATAAgattttc gtgacttttttttagcagattcatataaaaaagtcacgaaaaaacattgc gtgatTGGCTAAACATATATAAGCAAATTTTTTCAAGTGTCCAAAGTATG AGGCAATCTTTACATATCTGAGCAAATCAGAGCTTAACTGGCTTAACTCA AGGTTCTTTTGTGACTTTTTATATGAAGCTGCTAATGGGAAATACGTGTA ATGTAACGATTTGTAAATTCAGTAAAAAGAAaaaccctttctcacagacc tggtaggattttttcagccagtggggtaaaaataacggattaAGACTCAA TGgtgattgatgtttttttatggctactctcgggtacctaatagccgccc cctcCCGCTTATCAATTTTGGGGAAAACGTTTTGGAAAGTTCCCTTTTta gtcctaattctgctgtatttgcctccttttcaaaaactttccacccagga catttttattccaaccaccccccccccacatgcttattaagttttgagat tttttctaaCCCCGCACTCcacttattccaatcccccaaATATTAGATAA ACGAGAGTAAAGATTGGAATTCCATTATTTCCTAATCAGAAAATCCAAtg aggatggaaaaaatagcactcAGTATGTGAGAAGGGTTCCAAGTGGTTCT GAGAGAAGGGTGTTGTTAAGATTCATTTGCTTTAACTGTGCGGTCTCTTT ATTAAAACGGtgcaaattaaaagtgaattaacttcaatttatttctataa aaataaGGATCTGTTGAAATCAGATTTGGGTGATAAGCTAACCAAAAACA CCTTTGATTTGCTACCATTTTAAGTAAGGCTAGGGGTCTTCAGTTTGCTG GTAGCATTGCCTTTGGGTGTCCTTATAAGTCTTCTCCTCCCAAAacaatt ggaatctaaagtgtCTTTTTGGCTCAATAAAGATCGAGAGCTGTGAACAG GAGCACCTGGACATTATAACACATTATAGTGACTGGAAAAGTGCGACCAT AATTTAAGATTGAATCCGTCATCTCTACCGCGTGGTCAAAAGATGATGTT GATGCAGCAGACATTGGGAAAATAATATTACTAAACTTTAATACTTAATA aactaaaatatttgtttcaTCTTTTGTAGCACAACCAGACGATGAAGTGA TAGAGGCAGATGATCGTTGTGTAGCTTTGACTGGTTCTGGATGTTGGAAA GTTTATGCTTGTAGTATGGCATCCGATACTATAACCGCTACTGATACTAC AATCAATCCTTTTCTTACTATGTGCGAGTTCGATATCCGTGAGTCAAACC CAACCAACCATGAATTATTCACTTTGATTCAAGTTTTAAGATCAAATGTC AATGAAATCACTAAAGATTGTAAACGATGCAAAGGTGTTGAATAGAACTA TAAAACTTTTCTTTCCTG

Coding sequence (CDS) from alignment at sc0000100:159522..164039+

>TCONS_00009904 ID=TCONS_00009904|Name=TCONS_00009904|organism=Clytia hemisphaerica|type=CDS|length=6138bp|location=Sequence derived from alignment at sc0000100:159522..164039+ (Clytia hemisphaerica)
ATGATGGGTAGAATTTCTATAATTGTATTCTTCTGCATTATTGCAGTGAC
AATCATTGAAGCGAAGAAATCTTTGACATGTGATGAATATATTGCTGGAA
ATCCTATGCAAGTGTGTGtTGATGGATACATCTTTGAGCGAAATGATGAG
GTAGGGGTGACATGGGTGGAAGCAGAATTTgacgtttgccgaaaaaaagg
AGGTCATTTAGCTTCCGTTACAAGTGATGATCAAGTGGTAGCTATGGAGA
TGCTCCTTCCTACAGGTGAACAAGCATGGCTTGGTACAGAAGTAGTGATG
GGAACCGGTCCCTTCAATAATGATAAAACAGAAGTACCTATGGACGTATC
AGCACAAATAACGACGGCAGGAAACGCACTAGTTATTGGAGATGGAAACG
GGGCAATTACTGATTTAGGCGAACTTAATCCAATTTCTACAGATGTCAAT
CATTTCTTTTGCAAATACAATTATTTCCATAacaggaaaatttattttgg
attTCCTGTCACAGGCATGACCCAACCTGATACTGCTACAGAATGTGAAA
TGCTTGGTGAACCTAAGGATGGACGTATTATTCAAATCGATAGTGGAAAA
CTTCAAAACTTCGTGAATGCAGAAGTTGACCGATTAGTTGAGAAGGCAGA
TCCTGAGGAATATTTGTTTTGGATAAACATGAAATACAGCGAAACGACCA
TGAAATACAAGTGGGGTGTTGAAGGGACTTATTCACCTTTCCGTAAATGG
TGTACCGCACAACCAGACGATGAAGTGATAGAGGCAGATGATCGTTGTGT
AGCTTTGACTGGTTCTGGATGTTGGAAAGTTTATGCTTGTAGTATGGCAT
CCGATACTATAACCGCTACTGATACTACAATCAATCCTTTTCTTACTATG
TGCGAGTTCGATATCCGTGAGTCAAACCCAACCAACCATGAATTATTCAC
TTTGATTCAAGTTTTAAGATCAAATGTCAATGAAATCACTAAAGATTGTA
AACGATGCAAAGGTGTTGAATAGATGATGGGTAGAATTTCTATAATTGTA
TTCTTCTGCATTATTGCAGTGACAATCATTGAAGCGAAGAAATCTTTGAC
ATGTGATGAATATATTGCTGGAAATCCTATGCAAGTGTGTGtTGATGGAT
ACATCTTTGAGCGAAATGATGAGGTAGGGGTGACATGGGTGGAAGCAGAA
TTTgacgtttgccgaaaaaaaggAGGTCATTTAGCTTCCGTTACAAGTGA
TGATCAAGTGGTAGCTATGGAGATGCTCCTTCCTACAGGTGAACAAGCAT
GGCTTGGTACAGAAGTAGTGATGGGAACCGGTCCCTTCAATAATGATAAA
ACAGAAGTACCTATGGACGTATCAGCACAAATAACGACGGCAGGAAACGC
ACTAGTTATTGGAGATGGAAACGGGGCAATTACTGATTTAGGCGAACTTA
ATCCAATTTCTACAGATGTCAATCATTTCTTTTGCAAATACAATTATTTC
CATAacaggaaaatttattttggattTCCTGTCACAGGCATGACCCAACC
TGATACTGCTACAGAATGTGAAATGCTTGGTGAACCTAAGGATGGACGTA
TTATTCAAATCGATAGTGGAAAACTTCAAAACTTCGTGAATGCAGAAGTT
GACCGATTAGTTGAGAAGGCAGATCCTGAGGAATATTTGTTTTGGATAAA
CATGAAATACAGCGAAACGACCATGAAATACAAGTGGGGTGTTGAAGGGA
CTTATTCACCTTTCCGTAAATGGTGTACCGCACAACCAGACGATGAAGTG
ATAGAGGCAGATGATCGTTGTGTAGCTTTGACTGGTTCTGGATGTTGGAA
AGTTTATGCTTGTAGTATGGCATCCGATACTATAACCGCTACTGATACTA
CAATCAATCCTTTTCTTACTATGTGCGAGTTCGATATCCGTGAGTCAAAC
CCAACCAACCATGAATTATTCACTTTGATTCAAGTTTTAAGATCAAATGT
CAATGAAATCACTAAAGATTGTAAACGATGCAAAGGTGTTGAATAGATGA
TGGGTAGAATTTCTATAATTGTATTCTTCTGCATTATTGCAGTGACAATC
ATTGAAGCGAAGAAATCTTTGACATGTGATGAATATATTGCTGGAAATCC
TATGCAAGTGTGTGtTGATGGATACATCTTTGAGCGAAATGATGAGGTAG
GGGTGACATGGGTGGAAGCAGAATTTgacgtttgccgaaaaaaaggAGGT
CATTTAGCTTCCGTTACAAGTGATGATCAAGTGGTAGCTATGGAGATGCT
CCTTCCTACAGGTGAACAAGCATGGCTTGGTACAGAAGTAGTGATGGGAA
CCGGTCCCTTCAATAATGATAAAACAGAAGTACCTATGGACGTATCAGCA
CAAATAACGACGGCAGGAAACGCACTAGTTATTGGAGATGGAAACGGGGC
AATTACTGATTTAGGCGAACTTAATCCAATTTCTACAGATGTCAATCATT
TCTTTTGCAAATACAATTATTTCCATAacaggaaaatttattttggattT
CCTGTCACAGGCATGACCCAACCTGATACTGCTACAGAATGTGAAATGCT
TGGTGAACCTAAGGATGGACGTATTATTCAAATCGATAGTGGAAAACTTC
AAAACTTCGTGAATGCAGAAGTTGACCGATTAGTTGAGAAGGCAGATCCT
GAGGAATATTTGTTTTGGATAAACATGAAATACAGCGAAACGACCATGAA
ATACAAGTGGGGTGTTGAAGGGACTTATTCACCTTTCCGTAAATGGTGTA
CCGCACAACCAGACGATGAAGTGATAGAGGCAGATGATCGTTGTGTAGCT
TTGACTGGTTCTGGATGTTGGAAAGTTTATGCTTGTAGTATGGCATCCGA
TACTATAACCGCTACTGATACTACAATCAATCCTTTTCTTACTATGTGCG
AGTTCGATATCCGTGAGTCAAACCCAACCAACCATGAATTATTCACTTTG
ATTCAAGTTTTAAGATCAAATGTCAATGAAATCACTAAAGATTGTAAACG
ATGCAAAGGTGTTGAATAGATGATGGGTAGAATTTCTATAATTGTATTCT
TCTGCATTATTGCAGTGACAATCATTGAAGCGAAGAAATCTTTGACATGT
GATGAATATATTGCTGGAAATCCTATGCAAGTGTGTGtTGATGGATACAT
CTTTGAGCGAAATGATGAGGTAGGGGTGACATGGGTGGAAGCAGAATTTg
acgtttgccgaaaaaaaggAGGTCATTTAGCTTCCGTTACAAGTGATGAT
CAAGTGGTAGCTATGGAGATGCTCCTTCCTACAGGTGAACAAGCATGGCT
TGGTACAGAAGTAGTGATGGGAACCGGTCCCTTCAATAATGATAAAACAG
AAGTACCTATGGACGTATCAGCACAAATAACGACGGCAGGAAACGCACTA
GTTATTGGAGATGGAAACGGGGCAATTACTGATTTAGGCGAACTTAATCC
AATTTCTACAGATGTCAATCATTTCTTTTGCAAATACAATTATTTCCATA
acaggaaaatttattttggattTCCTGTCACAGGCATGACCCAACCTGAT
ACTGCTACAGAATGTGAAATGCTTGGTGAACCTAAGGATGGACGTATTAT
TCAAATCGATAGTGGAAAACTTCAAAACTTCGTGAATGCAGAAGTTGACC
GATTAGTTGAGAAGGCAGATCCTGAGGAATATTTGTTTTGGATAAACATG
AAATACAGCGAAACGACCATGAAATACAAGTGGGGTGTTGAAGGGACTTA
TTCACCTTTCCGTAAATGGTGTACCGCACAACCAGACGATGAAGTGATAG
AGGCAGATGATCGTTGTGTAGCTTTGACTGGTTCTGGATGTTGGAAAGTT
TATGCTTGTAGTATGGCATCCGATACTATAACCGCTACTGATACTACAAT
CAATCCTTTTCTTACTATGTGCGAGTTCGATATCCGTGAGTCAAACCCAA
CCAACCATGAATTATTCACTTTGATTCAAGTTTTAAGATCAAATGTCAAT
GAAATCACTAAAGATTGTAAACGATGCAAAGGTGTTGAATAGATGATGGG
TAGAATTTCTATAATTGTATTCTTCTGCATTATTGCAGTGACAATCATTG
AAGCGAAGAAATCTTTGACATGTGATGAATATATTGCTGGAAATCCTATG
CAAGTGTGTGtTGATGGATACATCTTTGAGCGAAATGATGAGGTAGGGGT
GACATGGGTGGAAGCAGAATTTgacgtttgccgaaaaaaaggAGGTCATT
TAGCTTCCGTTACAAGTGATGATCAAGTGGTAGCTATGGAGATGCTCCTT
CCTACAGGTGAACAAGCATGGCTTGGTACAGAAGTAGTGATGGGAACCGG
TCCCTTCAATAATGATAAAACAGAAGTACCTATGGACGTATCAGCACAAA
TAACGACGGCAGGAAACGCACTAGTTATTGGAGATGGAAACGGGGCAATT
ACTGATTTAGGCGAACTTAATCCAATTTCTACAGATGTCAATCATTTCTT
TTGCAAATACAATTATTTCCATAacaggaaaatttattttggattTCCTG
TCACAGGCATGACCCAACCTGATACTGCTACAGAATGTGAAATGCTTGGT
GAACCTAAGGATGGACGTATTATTCAAATCGATAGTGGAAAACTTCAAAA
CTTCGTGAATGCAGAAGTTGACCGATTAGTTGAGAAGGCAGATCCTGAGG
AATATTTGTTTTGGATAAACATGAAATACAGCGAAACGACCATGAAATAC
AAGTGGGGTGTTGAAGGGACTTATTCACCTTTCCGTAAATGGTGTACCGC
ACAACCAGACGATGAAGTGATAGAGGCAGATGATCGTTGTGTAGCTTTGA
CTGGTTCTGGATGTTGGAAAGTTTATGCTTGTAGTATGGCATCCGATACT
ATAACCGCTACTGATACTACAATCAATCCTTTTCTTACTATGTGCGAGTT
CGATATCCGTGAGTCAAACCCAACCAACCATGAATTATTCACTTTGATTC
AAGTTTTAAGATCAAATGTCAATGAAATCACTAAAGATTGTAAACGATGC
AAAGGTGTTGAATAGATGATGGGTAGAATTTCTATAATTGTATTCTTCTG
CATTATTGCAGTGACAATCATTGAAGCGAAGAAATCTTTGACATGTGATG
AATATATTGCTGGAAATCCTATGCAAGTGTGTGtTGATGGATACATCTTT
GAGCGAAATGATGAGGTAGGGGTGACATGGGTGGAAGCAGAATTTgacgt
ttgccgaaaaaaaggAGGTCATTTAGCTTCCGTTACAAGTGATGATCAAG
TGGTAGCTATGGAGATGCTCCTTCCTACAGGTGAACAAGCATGGCTTGGT
ACAGAAGTAGTGATGGGAACCGGTCCCTTCAATAATGATAAAACAGAAGT
ACCTATGGACGTATCAGCACAAATAACGACGGCAGGAAACGCACTAGTTA
TTGGAGATGGAAACGGGGCAATTACTGATTTAGGCGAACTTAATCCAATT
TCTACAGATGTCAATCATTTCTTTTGCAAATACAATTATTTCCATAacag
gaaaatttattttggattTCCTGTCACAGGCATGACCCAACCTGATACTG
CTACAGAATGTGAAATGCTTGGTGAACCTAAGGATGGACGTATTATTCAA
ATCGATAGTGGAAAACTTCAAAACTTCGTGAATGCAGAAGTTGACCGATT
AGTTGAGAAGGCAGATCCTGAGGAATATTTGTTTTGGATAAACATGAAAT
ACAGCGAAACGACCATGAAATACAAGTGGGGTGTTGAAGGGACTTATTCA
CCTTTCCGTAAATGGTGTACCGCACAACCAGACGATGAAGTGATAGAGGC
AGATGATCGTTGTGTAGCTTTGACTGGTTCTGGATGTTGGAAAGTTTATG
CTTGTAGTATGGCATCCGATACTATAACCGCTACTGATACTACAATCAAT
CCTTTTCTTACTATGTGCGAGTTCGATATCCGTGAGTCAAACCCAACCAA
CCATGAATTATTCACTTTGATTCAAGTTTTAAGATCAAATGTCAATGAAA
TCACTAAAGATTGTAAACGATGCAAAGGTGTTGAATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005552XLOC_005552Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009904-proteinTCONS_00009904-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009904-exon-sc0000100-1491911889:159522..159783TCONS_00009904-exon-sc0000100-1491911889:159522..159783Clytia hemisphaericaexon
TCONS_00009904-exon-sc0000100-1510915933:159522..159783TCONS_00009904-exon-sc0000100-1510915933:159522..159783Clytia hemisphaericaexon
TCONS_00009904-exon-sc0000100-1575043694:159522..159783TCONS_00009904-exon-sc0000100-1575043694:159522..159783Clytia hemisphaericaexon
TCONS_00009904-exon-sc0000100-1491911889:160114..160261TCONS_00009904-exon-sc0000100-1491911889:160114..160261Clytia hemisphaericaexon
TCONS_00009904-exon-sc0000100-1510915933:160114..160261TCONS_00009904-exon-sc0000100-1510915933:160114..160261Clytia hemisphaericaexon
TCONS_00009904-exon-sc0000100-1575043694:160114..160261TCONS_00009904-exon-sc0000100-1575043694:160114..160261Clytia hemisphaericaexon
TCONS_00009904-exon-sc0000100-1491911889:160840..161087TCONS_00009904-exon-sc0000100-1491911889:160840..161087Clytia hemisphaericaexon
TCONS_00009904-exon-sc0000100-1510915933:160840..161087TCONS_00009904-exon-sc0000100-1510915933:160840..161087Clytia hemisphaericaexon
TCONS_00009904-exon-sc0000100-1575043694:160840..161087TCONS_00009904-exon-sc0000100-1575043694:160840..161087Clytia hemisphaericaexon
TCONS_00009904-exon-sc0000100-1491911889:161289..161409TCONS_00009904-exon-sc0000100-1491911889:161289..161409Clytia hemisphaericaexon
TCONS_00009904-exon-sc0000100-1510915933:161289..161409TCONS_00009904-exon-sc0000100-1510915933:161289..161409Clytia hemisphaericaexon
TCONS_00009904-exon-sc0000100-1575043694:161289..161409TCONS_00009904-exon-sc0000100-1575043694:161289..161409Clytia hemisphaericaexon
TCONS_00009904-exon-sc0000100-1491911889:162440..162561TCONS_00009904-exon-sc0000100-1491911889:162440..162561Clytia hemisphaericaexon
TCONS_00009904-exon-sc0000100-1510915933:162440..162561TCONS_00009904-exon-sc0000100-1510915933:162440..162561Clytia hemisphaericaexon
TCONS_00009904-exon-sc0000100-1575043694:162440..162561TCONS_00009904-exon-sc0000100-1575043694:162440..162561Clytia hemisphaericaexon
TCONS_00009904-exon-sc0000100-1491911889:163751..164039TCONS_00009904-exon-sc0000100-1491911889:163751..164039Clytia hemisphaericaexon
TCONS_00009904-exon-sc0000100-1510915933:163751..164039TCONS_00009904-exon-sc0000100-1510915933:163751..164039Clytia hemisphaericaexon
TCONS_00009904-exon-sc0000100-1575043694:163751..164039TCONS_00009904-exon-sc0000100-1575043694:163751..164039Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000100supercontigsc0000100:159522..164039 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.183262 0 0 0 0.327287 0 0.256122 1.32265 3.11046 2.7324 0 1.57974 0.121388 1.23316 0.118191 0.383487 0 0 0 0 0.250527 0 0 0 0 0.145279 0 0 0 0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR016186C-type_lectin-like/link
IPR001304C-type_lectin-like
IPR016187CTDL_fold
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009904 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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