XLOC_005552 (gene) - C. hemisphaerica

Overview
NameXLOC_005552
Unique NameXLOC_005552
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000100:159522..164039+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005552 ID=XLOC_005552|Name=XLOC_005552|organism=Clytia hemisphaerica|type=gene|length=4518bp|location=Sequence derived from alignment at sc0000100:159522..164039+ (Clytia hemisphaerica)
GCTCATTACTTAATGTTGTAGTTTTACGGGGGTATAAAAAGGACCAACAT GCAGCCATTAGAATCACATTCAAACGTGAAGAATCAGAATCTTCAGTCAG CAAGTGGAAACAAACTTTAAAGATTGTTTTAAATATACACATTCATGATG GGTAGAATTTCTATAATTGTATTCTTCTGCATTATTGCAGTGACAATCAT TGAAGCGAAGAAATCTTTGACATGTGATGAATATATTGCTGGAAATCCTA TGCAAGTGTGTGGTATGTAAATCAATTAACTCAANATATTGCTGGAAATC CTATGCAAGTGTGTGGTATGTAAATCATTTAACTAGGAGTAGTAGACGTA GAAAAATTAGGAAATAGGAAACAATTATTCTTGAAGAAAGCTTTACTTAA AACAACTTTTGTTCAGTAGCGTTCtggcttgtttttttttggggtGCCCA CTGCAAATTCGTTTCCATGTATGTTTTGAAGGAGTTCAGTCCTTTAGTAC CTACTTCCTTCACAATATTACTTCAGAATAAATAATGTAGAATCATTACT TTCAATAATTACCAATTTTTGACGcttctttttatcttttagtTGATGGA TACATCTTTGAGCGAAATGATGAGGTAGGGGTGACATGGGTGGAAGCAGA ATTTgacgtttgccgaaaaaaaggAGGTCATTTAGCTTCCGTTACAAGTG ATGATCAAGTGGTAGCTATGGAGATGCTCCTTCCTACAGGGTAATTTTTG AGATGAACCCTTAAAAAGTTACATTCAAATCTACTTGTTATATTCTGAGA TAAcactctttcattgaatattttttatgcGTTTTCTCATTGCGATTTAG TTGGTTTAGTGAAAGCGGATAAAACATAACGTAATGACTCCAAAAAACAT TACATAATCCTATATAGCGACCAATAAAGATAACAAATATTTTGCAGATA ATTTTTTGAGTCGAAAAGGTGACTATCAAACATTTGCCCTtaatatttta tccaaaaaggCCTTTTGTTGTAGTAATAGATATACCCACACTTCAAATTA CCTTGAGGGAAATTAATTTTTACgggaaatcaaattttttcccgGTTTTA CGAATTAcaaatttggctgtttttctttaataaatttgaaaaattagggC TAAATTAAAggaaatttgtccaaaatagGGCCGAACTCTGAAAATATATG ACCGcgaaatgccattttttcaaactttctttcgCCCACGAAAATTAATT CCAGCCAGAATTAGTTAAGTTAAGGTAGGTTTCAATAAATTTCTGAAATG CACTTCTCCTTCCTTTAGTGAACAAGCATGGCTTGGTACAGAAGTAGTGA TGGGAACCGGTCCCTTCAATAATGATAAAACAGAAGTACCTATGGACGTA TCAGCACAAATAACGACGGCAGGAAACGCACTAGTTATTGGAGATGGAAA CGGGGCAATTACTGATTTAGGCGAACTTAATCCAATTTCTACAGATGTCA ATCATTTCTTTTGCAAATACAATTATTTCCATAacaggaaaatttatttt ggattTCCTGTCACAGGTATTTTATAAGGAAATTATAGGTTTTGCTGACt ctaaaaagaacaaaaacaattaaaaaatggcgaaaataagaatatattaa aaatatctttagacttaaaactaaAAACAGTTAATATAATAACATCTCGa ggctttaaagatttttaatgtTGTTGTAAAATAACGTGTATagttatata tttattttctttggcAGGCATGACCCAACCTGATACTGCTACAGAATGTG AAATGCTTGGTGAACCTAAGGATGGACGTATTATTCAAATCGATAGTGGA AAACTTCAAAACTTCGTGAATGCAGAAGTTGACCGATTGTAAGGAGAATT AACTCTCATCGCTAATCCAAGGCTNATGCAGAAGTTGACCGATTGTAAGT AGAATTAACTCTCATCGCTAATCCAAGGCTGGAAGCATTCAGTTTAAATC CCGAatggctagagtagaatctctaacctttctcaggaaAGATAAAGTAA AACCACTTATTTGACATCCAGAACCCACCTAGAACGCAGTGGAATCATAA CAACGGATTGTATCTaatggtttctttgtttttgaggactacattttttt ttatcaaaacttaagtggcttcatttctacacccctgtgtcacagacccg gtggaccccccatcccggtggaaaaataggccaaaaaatcgtttCCGGTT GAAAGAATATCCTacattttcaaccccactgcgaaattgttgatgatttt atccccattgaaaactgaatgtaaaaagctgcattccaaaaccatcccca ctgaaattttcgagctggaaagaatagattttctatccccattggcattt tgatagaaattttcatccccactgagggaaaaagttctaccgggcactga gacaggggtgtccactggaaacccttcccactggaaaaattggcaaaaat atcatCCCCAGTAGAAAATTATACACTaacttttgtccccactgaaaata atcagataagccattcctcactgcaaattattgtgctattttttccgtCT CCACTGATTTTTCTGgctaaaaaacaatagaattcaaatccccagccatg aaAAAAACATGGAAATGTCAATTtccatcgagttttggttcACTATTTTT ATTCCCAATGGCTGAAAAAACCCAACCAGGTCTGTGGGAAGGGGGTGTTT AAATTCTCCTTAAAAACTCTTCTcggaatcaattaccatagcaatagtTT GGAAACGAGGTTATCGTTGCTCaggacgtaatttatgaaaaggtctattc actCGATTACAATAATTTAAACTACATACTCATTTATTAAAACATAATTT GTTCATTGAATACCATAGAGTTGAGAAGGCAGATCCTGAGGAATATTTGT TTTGGATAAACATGAAATACAGCGAAACGACCATGAAATACAAGTGGGGT GTTGAAGGGACTTATTCACCTTTCCGTAAATGGTGTACCGGTAAGTCTaa tcaaatacacgtttttataagaacaaacttatTAAGAACATAAgattttc gtgacttttttttagcagattcatataaaaaagtcacgaaaaaacattgc gtgatTGGCTAAACATATATAAGCAAATTTTTTCAAGTGTCCAAAGTATG AGGCAATCTTTACATATCTGAGCAAATCAGAGCTTAACTGGCTTAACTCA AGGTTCTTTTGTGACTTTTTATATGAAGCTGCTAATGGGAAATACGTGTA ATGTAACGATTTGTAAATTCAGTAAAAAGAAaaaccctttctcacagacc tggtaggattttttcagccagtggggtaaaaataacggattaAGACTCAA TGgtgattgatgtttttttatggctactctcgggtacctaatagccgccc cctcCCGCTTATCAATTTTGGGGAAAACGTTTTGGAAAGTTCCCTTTTta gtcctaattctgctgtatttgcctccttttcaaaaactttccacccagga catttttattccaaccaccccccccccacatgcttattaagttttgagat tttttctaaCCCCGCACTCcacttattccaatcccccaaATATTAGATAA ACGAGAGTAAAGATTGGAATTCCATTATTTCCTAATCAGAAAATCCAAtg aggatggaaaaaatagcactcAGTATGTGAGAAGGGTTCCAAGTGGTTCT GAGAGAAGGGTGTTGTTAAGATTCATTTGCTTTAACTGTGCGGTCTCTTT ATTAAAACGGtgcaaattaaaagtgaattaacttcaatttatttctataa aaataaGGATCTGTTGAAATCAGATTTGGGTGATAAGCTAACCAAAAACA CCTTTGATTTGCTACCATTTTAAGTAAGGCTAGGGGTCTTCAGTTTGCTG GTAGCATTGCCTTTGGGTGTCCTTATAAGTCTTCTCCTCCCAAAacaatt ggaatctaaagtgtCTTTTTGGCTCAATAAAGATCGAGAGCTGTGAACAG GAGCACCTGGACATTATAACACATTATAGTGACTGGAAAAGTGCGACCAT AATTTAAGATTGAATCCGTCATCTCTACCGCGTGGTCAAAAGATGATGTT GATGCAGCAGACATTGGGAAAATAATATTACTAAACTTTAATACTTAATA aactaaaatatttgtttcaTCTTTTGTAGCACAACCAGACGATGAAGTGA TAGAGGCAGATGATCGTTGTGTAGCTTTGACTGGTTCTGGATGTTGGAAA GTTTATGCTTGTAGTATGGCATCCGATACTATAACCGCTACTGATACTAC AATCAATCCTTTTCTTACTATGTGCGAGTTCGATATCCGTGAGTCAAACC CAACCAACCATGAATTATTCACTTTGATTCAAGTTTTAAGATCAAATGTC AATGAAATCACTAAAGATTGTAAACGATGCAAAGGTGTTGAATAGAACTA TAAAACTTTTCTTTCCTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009904TCONS_00009904Clytia hemisphaericatranscript
TCONS_00009905TCONS_00009905Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009904-proteinTCONS_00009904-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000100supercontigsc0000100:159522..164039 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.18 0 0.07 0 0.33 0.18 1.37 1.68 3.95 4.44 1.84 1.99 1.42 2.7 0.3 0.38 0.14 0.25 0.25 0.25 0.32 0.1 0 0 0.44 0.93 0.28 0.46 0 0.2