TCONS_00009794 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009794
Unique NameTCONS_00009794
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2911

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009794 ID=TCONS_00009794|Name=TCONS_00009794|organism=Clytia hemisphaerica|type=transcript|length=2911bp
GTGATGATGCACATACACTTTTAGAGAGAAAAGAGATAAagtaaaaatca
taaacaattCACTCAAATCACCATCTTCAATTACAACCATGAATCTAACA
ATTGCTTGGTGGACTGGTAAACGCATAGGTGTATTGTTGGCTCGACCATC
AGTCCTGTCCATGAAGAATCAGTATGTCTGCAAGAGGAACCAGAGTACAA
TGTTAGCTGAAGTTGGCAGATTTGAAACTCCAAAAGTCCAAGGAAAATAT
GAAGCAGGCCAGTTGTTCCTACATCGTGTGTTTGGGTATAGAGGTGTCAT
CTTGTACCCATGGATCGCCAAATTCTATGATCTTGATTCCATTACCGATG
GCAAAGACAAACCGATTCTTGAAGAAACaccacaaaatgaaaaaaagaat
acTAAAGAAACTGCAATGAAGCCGTCATCTTCTACTTATTACCAAGTTCT
CATTGATGAACGAGATTATCCGCACATTAGGGCACAATCGGAGGCTGTTA
CATTTTTGGGCAACCCAGAGGATACCACACTGTATGCTGTACCCGGTTTG
GATTATGTGAATCACACGGATATTTTACCGTACATATCAAGTTCTGAGCA
ACCTATCGAACATGATCTGTTCAAGAAATTCCTTCTCCCTAACCAAGACC
AAGTACCGGCTTTCACTGCAAGCCCATCATTGCGCACATGGCATCAAAAG
AACCACAAGTGGCTTGAATTGTCCGAAGTGATCCGTGAAACTACGGACAA
CATCCGTGTCACTGCTATTCCTTTTTACATGGGCTCCAGGATGGTTCACG
GCGCCAAAAGCTACTGGtGGCGATATTCCATCCGCTTAGAGAACATGGGT
ATGGAGTCTGTACAATTGAAAGAAAGACATTGGCGAATCTTTTGTCTGTC
TGGCGTATTGGATTCAGTGAAGGGGCGTGGAGTGGTGGGACAAGAACCTG
TTCTCTCAACTCGGCAACCGGCATTTCAGTATAGTAGTCACGTGACGTTA
CCCTCACCAAGTGGACACATGTGGGGTACGTATCGTTTGGAGCGTCCTGA
CGGACGAGTGTTCGACGTCCGTATTCCGTCATTCCCGTTGGAAAGTAAAG
AAGACGATCCAATAACTACGTGATCGGAACGATTCCTTTCGTCAGCCTTA
GTGGTGGTTTAGAGGAGTAGATGCATTCGGGGAAAGAACGAAGTGTGTGT
AAAACCTCTACTCGTTGAGATAGTCCCGAGAAATTATCCTTTACGCGATT
CTAACCAAGCGTCGATGAAAGtagaatagaccttatcggagttttatatt
ttttcgaaaaaaagcgATGTAttatgggattgtttcgggggtattgcAAT
AGAAATgtcttttagaaaaaatcaatcatcttttttagaaaaatcaaaaa
ctccgataagatctattagaaagtttaaaacgcttagttttttcaaaaac
tatcggTAATATTATTTTGGTGGTGGAAGTGTGACAGTTAAACAATATGA
TTTATTGTCGAATAGCTTAGagttgctattgtttttgtaCGGTGGAAATG
GACGTGTTGAATAATGAACTAAGCTTACATAAACGGACACTTCAATCGAA
TTAATTTCGGCGATCTCGAGGTACCTAAGGCACTCcacataaaaaaaaca
tttacgttATCACGTTGCGACCGTGCAAGAGGTTCCGCCCCTTAACGTAa
acgttttttagtttttttttcaaagcattttgaTATAGACAATGGGATGG
GGCATGGTCAGATGCACTtactgaaaaatataaaaattttgagaaaaacc
taattttttagccaattttcatgattttgatgacgtcacagaaataagaa
tttgaataaCTTCTAGTAGGAGAAAGCTTTTgccctcaaaaaaaattcaa
gattttttgcttaCGTCAGCATATTTCAgcaaaaacggtttttttgaaag
ttttgctgacgtcagtaaatttttttttcgtagaTCGCTTCCTTTCGTCG
ATTTACACcgttggtgaaaatttgaagtcaaaagTCATACTTAAAGTTAT
TCAAGATTTTCTTTCTATGACATCATCGAAATGgagaaaaatgaagtttt
ctcgaaatttttcaattatggAGCAAGTGGGACCATCTGACCATGCCCCA
TCTCATTTTTTTTATCGAAACACTTCGAAAAACCTAAAAACATTTACGTT
AATGCGTGGTGCCTCATGCGGCCATTGGGGAGTGCCTTAAGTACCCCGAG
GAGATttaatttcgaatttttttgaatatatgccattttcgcgaaaataa
gctATGGCTGACTCGACTCGAGGAATCAGATTTTTGCGTAAAGTACActg
aaaattcaatattttgggCGTTTTCAAGGCCTTTTTtagcctggttaacc
aagccagtttttacaagGCTAAGATACGGCTAGGCCTTTTTAAACTAATG
CAAGTTTTTTGGTACCAATTCTGATATACAGTAGAGCTTTCGTAGTGCTT
ATTACACTCGTTCTAATTAAAGGTAAGTCATTTCTAGGTTATATGGTCtg
taccattgagtttaaagcccgaagggctagagtagaatctctaaactttc
ccaggcaagaaaagtgaagccacttatttcccatccagaacgcgccgcaa
tcatgacgacggattgtgaCGACGGTTCCTTTGTTCTTTGTTCCTTGATT
TTTTATCTAGCCATAGATTTTAGTtgcaatccggcgtttgtgtaaggGAA
ATaaatggtttcatttcccattaatttgtaaattttgcgtTGGTATATAA
CAAATTTTTCatgtacagtatgtggcccccaaaacggcgatcaaatttaa
aatttctctcaaatctagaggaaaaaaggttttacaaagatttttgctgc
atgaaaaactt
Run BLAST on NCBI

transcript from alignment at sc0000099:53397..63282+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009794 ID=TCONS_00009794|Name=TCONS_00009794|organism=Clytia hemisphaerica|type=transcript|length=9886bp|location=Sequence derived from alignment at sc0000099:53397..63282+ (Clytia hemisphaerica)
GTGATGATGCACATACACTTTTAGAGTAAGTAGGTTGGTCTATcagattt
gtttatttttaagaGACCTTTTGTCACATGACTCTTTGACTGATCCCCCA
CTTACGTTAGAAACCAACGTACCATCTTTTGTTTCTGAATGTCcttgtta
tttttgtttacttttccaTCTAACATCAATATACTTTTACCTCATGTCAA
ATGTactattttttaaatcaattggGTCCattgtgttgttgttgtttttt
gaattAGTATTCACGTTCTGAGGTCTATCAGCCAGTATAAGGAGTGGGCT
GGTAAGGGGTATGACAGTTTGAGATAAAGAataatctttttaatttatag
aTGTTCTTTTTTAAAGTTATATGGATTTTTTAGTTTCAAACCTCTCAAAG
GAATTCCTGGGTAAAGGCCAGAAATTTTTTCTTGGCCGAGACTGGCAACA
AAATAACTTTTGTTAGTGCACAGGATTATAACACAAAAGTTTCCAGCCCT
TTGCTTTGAgtgcaaattttgaaaaatagccCAGCTTAAGGTTTATTTTG
TTGATCCATTTTGCAAAAAGTGCAGATTCATTTCAAATGAGTGGGCAATT
AGTGACTAAATGACCCGAGACACACAGTTACATTTCTATTTATTGTATAT
TTTAGGAGAAAAGAGATAAagtaaaaatcataaacaattCACTCAAATCA
CCATCTTCAATTACAACCATGAATCTAACAATTGCTTGGTGGACTGGTAA
ACGCATAGGTGTATTGTTGGCTCGACCATCAGTCCTGTCCATGAAGAATC
AGTATGTCTGCAAGAGGAACCAGAGTACAATGTAAGCCATGTTCTTTTTC
AGAATATGTTTCAGGGTTCCCActggtcagggaaaacctggaaattgtac
tattttttgtaaaagtcagggcaaacctggaaaagtcagggaatATTTTA
TTANattaaattcccgccaaatttagttttttcgtccatccgccaaatta
aattccatctaaaaaactttttcggccatccgccaaattaaattctcgcc
aaaatttcttcctttaaggtatgtcTTTCCAAGTCagggaaaagtcaggg
aattCTGTTTTATAAATGCTTAAAATCAAAAGACTTCTATCAAATAGTCt
cttattttccaaaattttctgtGTCGGACCCTGCTTTCGTCAGGGAGAAA
TACCACTTTTTTTAgtaaaaagtcagggaaaataatgtttttcacattgg
attgacacagatgtggagcaaggttggtcaaaaagaggaaaaggaaaaaa
tatttttgcttattatatcagcataatataataataggcagacactgtcc
tgatgtgatatgaaatatgtgtctaatatgaaacgggaacacttatgtaa
agaTATAAACCTTTAAGTGTANcaaaaagaggaaaaggaaaaaatatttt
tgcttattatatcagcataatataataataggcagacactgtcctgatgt
gatatgaaatatgtgtctaatatgaaacgggaacacttatgtaaagaTAT
AAACCTTTAAGTGTAATAAGTTTGTAACAATTATTGTTTCAGGTTAGCTG
AAGTTGGCAGATTTGAAACTCCAAAAGTCCAAGGAAAATATGAAGCAGGC
CAGGTAATTATTCTNGTAACAATTATTGTTTCAGGTTAGCTGAAGTTGGC
AGATTTGAAACTCCAAAAGTCCAAGGAAAATATGAAGCAGGCCAGGTAAT
TATTCTAAATTGACAGACTTGGTTAGCACTGGTGAAGGAAGTCTAAAATC
CGAATCTGAGaaaattcaacaaaagaaatactGCAAAATACTATTTGAAA
CAGTTTGAAAATGTTCACATCCAAAAGATAGAATtgttatacatgttttt
tttataagcaagtgtctgccccttggtctggctcgtgtatgcttttaagt
tctcaaagcatccaggcatagtttatgcttattataagCAATGGAATGtc
gctagccgtggaatgtctattttttacttgacctctaccaaaccttttta
agcAGATAAAAAATggtaacttgaaaaatatttcaggctgacatatGTAT
GGGAAtcctgcaaatctgagccttcatatgcttataagcgttatgcttat
NAGGCTGACATATGTATGGGAAtcctgcaaatctgagccttcatatgctt
ataaaaaaacacgtatTTTGCATATctacaaaataatgaaaatggaaGGA
TTATGATTAACTAATGCACAATAAAGTGCTAATAGGGGTTCTTTATACAA
ACACAGTACAATTTTTCATTCTCCTATTTTTTCATTCCACCTACAGTTGT
TCCTACATCGTGTGTTTGGGTATAGAGGTGTCATCTTGTACCCATGGATC
GCCAAATTCTATGATCTTGATTCCATTACCGATGGCAAAGACAAACCGTA
AGTAGTTTCAAACTTATTGGATAGAAAAGCTATGGATCGATGTGTCTACG
TTCTGAAATCTTCAACTTATTTTGGCTTGGATCGCGAGTTTTACATCTGG
CTACATGTTGGAGAGATCATTTCACCTATACAATGGAGATATTATTTCAC
TTAATCAAACACAATGGAGAATATTTTCTTCATAATTTCTTCCGAGACCT
TTTTTTGATTCTGATCAACCATAATTATCAAACGTAAAATGTAGGAAAGT
TTCGGACAAGAAATTTGTTTCAGCCTCATTAAGATAAGTCACAAGGCAAA
TCTCCATAATGTTATTTTTGGTAGGATTCTTGAAGAAACaccacaaaatg
aaaaaaagaatacTAAAGAAACTGCAATGAAGCCGTCATCTTCTACTTAT
TACCAAGTTCTCATTGATGAACGAGATTATCCGCACATTGTAAGTTTCTC
TATTCATTTATTGTATATATTTGTATACCGGGTGCGTCTAAAAATCGCCC
CTATTTTACAATCTTTACATTTTTCTATTCAGTTGAGctgcttgaatttt
tttgtgagttgtacattttattttcaaacatttctcGAAGTATATCTGAA
TATTTGTTGTTGGTACATTTATATAGTGTACTCTCTAACTAACGAAAGAA
CATTGGGGTTCctttagattttcaaccttATCAGTTAAAGCCAGATTTTT
TGTAATAATTGCCagatttttcagattgtttGCTGTTTGGTTTTCCGGAC
TAAAAAATGTAGCCCCTGACTTTCTCcgatgtccgctaattagagagCTT
GTTTAAAATTTATCCCAATGATTTTTTAAGCTTCATTCACTCACTGCATG
ACAATATAAACATAAGTATGCACAAAGTAGACTACCTCTTTGGTGAGTAG
GAGGGTTCTACAAGCACGACaccaatttcatatttttgcaGTGGACGACC
TTCCCATCTTACAATTTCCGTTTTTATCATCCGCAGAGGGCACAATCGGA
GGCTGTTACATTTTTGGGCAACCCAGAGGATACCACACTGTATGCTGTAC
CCGGTAAAGGCTCGTTAATTTATTAAGGGTTTCTAAATTTGAtgaatttg
aattgaatttaaGATTTTTATGGATCCatcttttcaattaaaagattttc
tataaCAACCTTATCctttgttggacctacctggaggtcctataaattaa
cctttgtccgttcgtctgtccgTCTGTTCGTCTGTTACCAGCTTTTCTCG
AGATTGGCTCATTATTTTTTTCTGATTTTTGGAACAAAGCTGCAAAATAG
TAATGTCCAAAATGTGACGGAGCCACATTTTTTCCGGCCGAAAATACCAG
AAACATTTTTTTTGGCATTCTCTCGAGATTTTATCATTAGTTTTTCCGAT
TTTTTGCACAAAGATATGACCGAGTCCTAATTTTGAGAAAAATTATTTTC
CAAAAATGTTGGAAATATACTGGAAATTGCCGTTTTTGTAGATTTTCATT
GGACTTTTTCTAATAATCGTCAATACTGATTTTTGCAACCGGAACTTTCG
ATTTCTTTTTTCCCTACTCCCCTTCCCTCTCCCCCCATCAACAATCAATG
GTGAAATTTGATGCGTTATGCATTTTGGCTAAGCGCTATATTTTCTGACT
GATTGTTGAATTTTTCTCCTCATTGCTATCTAACTTTCATCGTCAGCTAG
GTCCAATCAGCATCTAGCCTGTTTTGAACAAAACAAAAAAAAGTAGCAGT
CGAGTAGTCGCTCGATGACAAAAGATTTACACAAAGATATAAATTGAATT
TATATTCAATTATATAGCCAGGTTTTTTATTCTTTAACGACTGGTGCTAT
TAATAAAAGAGTGAAATCCAATGATCTGGTGTTGTCTTTTTTTAGGTTTG
GATTATGTGAATCACACGGATATTTTACCGTACATATCAAGTTCTGAGCA
ACCTATCGAACATGATCTGTTCAAGAAATTCCTTCTCCCTAACCAAGACC
AAGGTAAAGTAACTCATATTAATATTATTCAGACATTCACCAAATGTTCA
TAATAACTCGGTGTCTGACAGTAGCTTGGTGGGTCGACCAAAATTGgggc
aaactggggaggcaattttaaaagattttgattttcgtgCCCCCTATTAA
AAGTAaacatctttgaaaaaataacgcgAGCGAAACGATCACGaaatttt
ttgggtatttctGTCCTTTTGATCGAAAACTACCAATTCTAAGAGGTAAA
AAAGCAAGGGGGTGCcaaaattagtaatcagaggcATATTTTTGCGCCCT
TTTTATTTCGTCGCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNccccccccccccccaaaaaaaaaaatcggccGATCGGGTGGCA
CTGCTTCCTgtcccctgccaccacgctactggtgTCTGCTTCGGTTACCT
CCATATCTTGAGCATCACCACATCTCTCGTAAACTTTTCTGGAATTATTT
ATCAATTATTCAATATTCTTCGTTCTACAGTACCGGCTTTCACTGCAAGC
CCATCATTGCGCACATGGCATCAAAAGAACCACAAGTGGCTTGAATTGTC
CGAAGTGATCCGTGAAACTACGGACAACATCCGTGTCACTGCTATTCCTT
TTTACATGGGCTCCAGGGTAGGTGCTTTTATACAACATATCATAAACGTC
AAAAGctgaagaaaaacagaaaatccaaaaaagccATTTCCTTGAGCATT
AACGTAATTTCGAAAATGCTTTTTACAATAGTAGGGTACTAAGGGTTCAG
TCAGTAAGGCCTTCTAACCGAGGGTTTTTTAATTACcttcagtattttcg
tttctttTTAGATGGTTCACGGCGCCAAAAGCTACTGGGTAAGAAGAATC
TAGTGAAATTTGTTCTATATAATCTCTTTTAACGGGATCCGTTGAATTGT
ATCCACCCGTCGGACGGGATGTCGGACGGATAAAATGCATTGAATTTTGT
ATCAGTGCATATAAGAATTCCGTAGGGAATTTCCCTTCTGTCCACTATTC
TCTAAGtttgaaccacaagtgattttgtgGTTTAGAGATGCTGAGGTATG
CAgagctgacgagtcctaataaggacgaaatgcatatgctgttctgccac
ccaaatctcctgaaagaaggtagttggacagaaattcttatttcttcaca
tatataatTGGTTTATAATTTATCGTTGTTTATGATTGGCATGATTAGCA
AGATCAGTTTTTTATTGCAACCAAAGAGGAAAAAAGGGTAAAATTCACCG
AGATACCAATAACATGTATCCATAAATGATTGATagctttttcctttctt
ttttcagtGGCGATATTCCATCCGCTTAGAGAACATGGGTATGGAGTCTG
TACAATTGAAAGAAAGACATTGGCGAATCTTTTGTCTGTCTGGCGTATTG
GATTCAGTGAAGGGGCGTGGAGTGGTGGGACAAGAACCTGTTCTCTCAAC
TCGGCAACCGGCATTTCAGTATAGTAGTCACGTGACGTTACCCTCACCAA
GTGGACACATGTGGTAAGATACTAATACCCTTTTTTATGAAGCCCCATAA
TAACATCGCATTGAATTTTTTCCAACGTTATTAAAGTTTAAAAGGtcaaa
agtaagaaaatatacaatttaggacttgcttttttgattttgataccTGG
ATTATTTTGATAACAGGGATGTTCAATGTCATCTTGATCTTCTCTAAGTA
TATTATATTCCgtataaaaaacactggtctagaagcttattgttttaact
ttttgttagcttttcccTTGGTTGTTTGGTTATTAgacaaaagatgaaaa
tcgatttgctcagtttttgatcacgttaccaagtactcctcttgggattg
ttTTAAGATtaaatcacatgatcaaaaagtgagcataacaaactaatttc
tcaacacaagttcaagtaagaaacaatggaaagaaaaaagGCTTTCGGAC
CGGGTGTTCTTATACGGACTACGGAGTATATAACAGCGTATCTTACTGTC
TACCCTAACCCCTTTCTTGTGCgatctactttaatgggataaactttcgc
ggggattaaatttcgcggttgggcctatccacgaaattcaaatattttgc
gNTTGTGCAAGTAACCATTtatatagtatttatttgacatatttttgttt
agaaatactTCGGGGacgaggcccttccaaattcccatggggacttaatt
tcgcggattttcgcggatgacacccaaatccgcgaaatccgcgaaattta
atccccgcgaaagtttatcccattaaagtataagAATGATTGTAACATAT
CCATGCTGTGGGGCCATGCTTATCGAATAATCCATTATTTATTCATAGGG
GTACGTATCGTTTGGAGCGTCCTGACGGACGAGTGTTCGACGTCCGTATT
CCGTCATTCCCGTTGGAAAGTAAAGAAGACGATCCAATAACTACGTGATC
GGAACGATTCCTTTCGTCAGCCTTAGTGGTGGTTTAGAGGAGTAGATGCA
TTCGGGGAAAGAACGAAGTGTGTGTAAAACCTCTACTCGTTGAGATAGTC
CCGAGAAATTATCCTTTACGCGATTCTAACCAAGCGTCGATGAAAGtaga
atagaccttatcggagttttatattttttcgaaaaaaagcgATGTAttat
gggattgtttcgggggtattgcAATAGAAATgtcttttagaaaaaatcaa
tcatcttttttagaaaaatcaaaaactccgataagatctattagaaagtt
taaaacgcttagttttttcaaaaactatcggTAATATTATTTTGGTGGTG
GAAGTGTGACAGTTAAACAATATGATTTATTGTCGAATAGCTTAGagttg
ctattgtttttgtaCGGTGGAAATGGACGTGTTGAATAATGAACTAAGCT
TACATAAACGGACACTTCAATCGAATTAATTTCGGCGATCTCGAGGTACC
TAAGGCACTCcacataaaaaaaacatttacgttATCACGTTGCGACCGTG
CAAGAGGTTCCGCCCCTTAACGTAaacgttttttagtttttttttcaaag
cattttgaTATAGACAATGGGATGGGGCATGGTCAGATGCACTtactgaa
aaatataaaaattttgagaaaaacctaattttttagccaattttcatgat
tttgatgacgtcacagaaataagaatttgaataaCTTCTAGTAGGAGAAA
GCTTTTgccctcaaaaaaaattcaagattttttgcttaCGTCAGCATATT
TCAgcaaaaacggtttttttgaaagttttgctgacgtcagtaaatttttt
tttcgtagaTCGCTTCCTTTCGTCGATTTACACcgttggtgaaaatttga
agtcaaaagTCATACTTAAAGTTATTCAAGATTTTCTTTCTATGACATCA
TCGAAATGgagaaaaatgaagttttctcgaaatttttcaattatggAGCA
AGTGGGACCATCTGACCATGCCCCATCTCATTTTTTTTATCGAAACACTT
CGAAAAACCTAAAAACATTTACGTTAATGCGTGGTGCCTCATGCGGCCAT
TGGGGAGTGCCTTAAGTACCCCGAGGAGATttaatttcgaatttttttga
atatatgccattttcgcgaaaataagctATGGCTGACTCGACTCGAGGAA
TCAGATTTTTGCGTAAAGTACActgaaaattcaatattttgggCGTTTTC
AAGGCCTTTTTtagcctggttaaccaagccagtttttacaagGCTAAGAT
ACGGCTAGGCCTTTTTAAACTAATGCAAGTTTTTTGGTACCAATTCTGAT
ATACAGTAGAGCTTTCGTAGTGCTTATTACACTCGTTCTAATTAAAGGTA
AGTCATTTCTAGGTTATATGGTCtgtaccattgagtttaaagcccgaagg
gctagagtagaatctctaaactttcccaggcaagaaaagtgaagccactt
atttcccatccagaacgcgccgcaatcatgacgacggattgtgaCGACGG
TTCCTTTGTTCTTTGTTCCTTGATTTTTTATCTAGCCATAGATTTTAGTt
gcaatccggcgtttgtgtaaggGAAATaaatggtttcatttcccattaat
ttgtaaattttgcgtTGGTATATAACAAATTTTTCatgtacagtatgtgg
cccccaaaacggcgatcaaatttaaaatttctctcaaatctagaggaaaa
aaggttttacaaagatttttgctgcatgaaaaactt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005482XLOC_005482Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009794-exon-sc0000099-1491911889:53397..53421TCONS_00009794-exon-sc0000099-1491911889:53397..53421Clytia hemisphaericaexon
TCONS_00009794-exon-sc0000099-1510915933:53397..53421TCONS_00009794-exon-sc0000099-1510915933:53397..53421Clytia hemisphaericaexon
TCONS_00009794-exon-sc0000099-1575043694:53397..53421TCONS_00009794-exon-sc0000099-1575043694:53397..53421Clytia hemisphaericaexon
TCONS_00009794-exon-sc0000099-1491911889:54052..54227TCONS_00009794-exon-sc0000099-1491911889:54052..54227Clytia hemisphaericaexon
TCONS_00009794-exon-sc0000099-1510915933:54052..54227TCONS_00009794-exon-sc0000099-1510915933:54052..54227Clytia hemisphaericaexon
TCONS_00009794-exon-sc0000099-1575043694:54052..54227TCONS_00009794-exon-sc0000099-1575043694:54052..54227Clytia hemisphaericaexon
TCONS_00009794-exon-sc0000099-1491911889:55081..55141TCONS_00009794-exon-sc0000099-1491911889:55081..55141Clytia hemisphaericaexon
TCONS_00009794-exon-sc0000099-1510915933:55081..55141TCONS_00009794-exon-sc0000099-1510915933:55081..55141Clytia hemisphaericaexon
TCONS_00009794-exon-sc0000099-1575043694:55081..55141TCONS_00009794-exon-sc0000099-1575043694:55081..55141Clytia hemisphaericaexon
TCONS_00009794-exon-sc0000099-1491911889:55743..55843TCONS_00009794-exon-sc0000099-1491911889:55743..55843Clytia hemisphaericaexon
TCONS_00009794-exon-sc0000099-1510915933:55743..55843TCONS_00009794-exon-sc0000099-1510915933:55743..55843Clytia hemisphaericaexon
TCONS_00009794-exon-sc0000099-1575043694:55743..55843TCONS_00009794-exon-sc0000099-1575043694:55743..55843Clytia hemisphaericaexon
TCONS_00009794-exon-sc0000099-1491911889:56171..56285TCONS_00009794-exon-sc0000099-1491911889:56171..56285Clytia hemisphaericaexon
TCONS_00009794-exon-sc0000099-1510915933:56171..56285TCONS_00009794-exon-sc0000099-1510915933:56171..56285Clytia hemisphaericaexon
TCONS_00009794-exon-sc0000099-1575043694:56171..56285TCONS_00009794-exon-sc0000099-1575043694:56171..56285Clytia hemisphaericaexon
TCONS_00009794-exon-sc0000099-1491911889:56833..56899TCONS_00009794-exon-sc0000099-1491911889:56833..56899Clytia hemisphaericaexon
TCONS_00009794-exon-sc0000099-1510915933:56833..56899TCONS_00009794-exon-sc0000099-1510915933:56833..56899Clytia hemisphaericaexon
TCONS_00009794-exon-sc0000099-1575043694:56833..56899TCONS_00009794-exon-sc0000099-1575043694:56833..56899Clytia hemisphaericaexon
TCONS_00009794-exon-sc0000099-1491911889:57742..57849TCONS_00009794-exon-sc0000099-1491911889:57742..57849Clytia hemisphaericaexon
TCONS_00009794-exon-sc0000099-1510915933:57742..57849TCONS_00009794-exon-sc0000099-1510915933:57742..57849Clytia hemisphaericaexon
TCONS_00009794-exon-sc0000099-1575043694:57742..57849TCONS_00009794-exon-sc0000099-1575043694:57742..57849Clytia hemisphaericaexon
TCONS_00009794-exon-sc0000099-1491911889:59527..59663TCONS_00009794-exon-sc0000099-1491911889:59527..59663Clytia hemisphaericaexon
TCONS_00009794-exon-sc0000099-1510915933:59527..59663TCONS_00009794-exon-sc0000099-1510915933:59527..59663Clytia hemisphaericaexon
TCONS_00009794-exon-sc0000099-1575043694:59527..59663TCONS_00009794-exon-sc0000099-1575043694:59527..59663Clytia hemisphaericaexon
TCONS_00009794-exon-sc0000099-1491911889:59858..59884TCONS_00009794-exon-sc0000099-1491911889:59858..59884Clytia hemisphaericaexon
TCONS_00009794-exon-sc0000099-1510915933:59858..59884TCONS_00009794-exon-sc0000099-1510915933:59858..59884Clytia hemisphaericaexon
TCONS_00009794-exon-sc0000099-1575043694:59858..59884TCONS_00009794-exon-sc0000099-1575043694:59858..59884Clytia hemisphaericaexon
TCONS_00009794-exon-sc0000099-1491911889:60354..60559TCONS_00009794-exon-sc0000099-1491911889:60354..60559Clytia hemisphaericaexon
TCONS_00009794-exon-sc0000099-1510915933:60354..60559TCONS_00009794-exon-sc0000099-1510915933:60354..60559Clytia hemisphaericaexon
TCONS_00009794-exon-sc0000099-1575043694:60354..60559TCONS_00009794-exon-sc0000099-1575043694:60354..60559Clytia hemisphaericaexon
TCONS_00009794-exon-sc0000099-1491911889:61395..63282TCONS_00009794-exon-sc0000099-1491911889:61395..63282Clytia hemisphaericaexon
TCONS_00009794-exon-sc0000099-1510915933:61395..63282TCONS_00009794-exon-sc0000099-1510915933:61395..63282Clytia hemisphaericaexon
TCONS_00009794-exon-sc0000099-1575043694:61395..63282TCONS_00009794-exon-sc0000099-1575043694:61395..63282Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000099supercontigsc0000099:53397..63282 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.73972	2.16872	1.30797	2.07625	9.03243	5.94779	7.55378	8.13417	5.2866	6.90899	5.26804	4.76885	5.05095	5.38575	4.29535	3.82516	4.31433	4.53687	3.15695	3.13297	5.02661	5.50922	4.21846	5.39733	7.35573	7.79636	2.72512	3.05032	2.05615	1.82381
Blast
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BLAST of TCONS_00009794 vs. Swiss-Prot (Human)
Match: PDIP2 (Polymerase delta-interacting protein 2 OS=Homo sapiens GN=POLDIP2 PE=1 SV=1)

HSP 1 Score: 384.415 bits (986), Expect = 9.717e-124
Identity = 189/326 (57.98%), Postives = 236/326 (72.39%), Query Frame = 2 
Query:  146 PSVLSMKNQYVCKRN--QSTMLAEVGRFETPKVQGKYEAGQLFLHRVFGYRGVILYPWIAKFYDLDSITDGKDKPILEETPQNEKKNTKETAMKPSSSTYYQVLIDERDYPHI--RAQSEAVTFLGNPEDT-TLYAVPGLDYVNHTDILPYISSSEQPIEHDLFKKFLLPNQDQVPAFTASPSLRTWHQKNHKWLELSEVIRETTDNIRVTAIPFYMGSRMVHGAKSYWWRYSIRLENMGMESVQLKERHWRIFCLSGVLDSVKGRGVVGQEPVLSTRQPAFQYSSHVTLPSPSGHMWGTYRLERPDGRVFDVRIPSFPLESKEDD 1108
            P+  +   +++  RN  +  +L  VG FE PK  GKYE GQLFLH +FGYRGV+L+PW A+ YD D  +   +K    E P      +KE  +K  + TYYQVLID RD PHI  R+Q+EAVTFL N +D+  LYA+PGLDYV+H DILPY S+ + PI+H+LF++FLL +Q + P F A  +LR W +KNH WLELS+V RETT+NIRVT IPFYMG R    +  YWWRY IRLEN+  + VQL+ERHWRIF LSG L++V+GRGVVG+EPVLS  QPAFQYSSHV+L + SGHMWGT+R ERPDG  FDVRIP F LES +D+
Sbjct:   41 PASTTTTRRHLSSRNRPEGKVLETVGVFEVPKQNGKYETGQLFLHSIFGYRGVVLFPWQARLYDRDVASAAPEK---AENPAGH--GSKE--VKGKTHTYYQVLIDARDCPHISQRSQTEAVTFLANHDDSRALYAIPGLDYVSHEDILPYTSTDQVPIQHELFERFLLYDQTKAPPFVARETLRAWQEKNHPWLELSDVHRETTENIRVTVIPFYMGMREAQNSHVYWWRYCIRLENLDSDVVQLRERHWRIFSLSGTLETVRGRGVVGREPVLSKEQPAFQYSSHVSLQASSGHMWGTFRFERPDGSHFDVRIPPFSLESNKDE 359
The following BLAST results are available for this feature:
BLAST of TCONS_00009794 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PDIP29.717e-12457.98Polymerase delta-interacting protein 2 OS=Homo sap... [more]
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