Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009773 ID=TCONS_00009773|Name=TCONS_00009773|organism=Clytia hemisphaerica|type=transcript|length=1873bp
GTGTCGTAGGATATCTATCAATCGAAACGAGGTTCGTCATGGTCCTAACT
ACATCGTCAAATCAAAATTCGATCGAATCAAAAAATCATTGTCTGATTCA
CTGCTAGCGCTAGGAGTTCCCCAGGCAGAGATAGACAGTCTTGGACAGCC
AATCAGGTATGGTTTTGTCAATCCTGTTTCTAGTTTCACAGGTAGAGAGA
AGTTGCTGCAAGAAATTTACAAGAAAGTGGACCAAAGCCGACAGACCGTT
TTGCAGTTAGTGATACATGCATTAGCTGGCAACGGAAAAACTGAGCTCGT
TCGACGTTTCGTTCATGAGAACTCAAAGGAGTTTGAGGAGAATGTTCTAT
GGATTAAAGCTGATTCTGAAGCTTCGTTATCGACTTCGTTCATTGAAATT
GCAGAACTCTTGAATCTTGACATCAAAGAACCAGATGGCACCAACAAATC
AATCAACTACATTCTCGCTAATGTTTATAATTATCTTCGTGATCAGAAAG
TTCTTTTTGTATTCGACGATGCATGGGACTTAGGGGTGGTCAAAAAGTTC
CTTCCAACATTCAAGGATACCACAGTTATAATAACATCGCAGAAAGCAGA
TTGGCCATCTCAAGACTTCGAAAGAATCCAAATGCTATCTTTTTCTGAAG
ATGAGTCAAAGAAACTACTTGCTTCACAATGCCAATCTATCCTTACTGAC
CAACAGATCCAGGAGATTATAAAACTGGCTGGAGGTCATCCTTTAACTCT
GCAGCAATTCATTACAGCTCTGAACCGCTCCTTATTAAATCCTGATGAGC
TGATTGCAACTTTCAAAGAGGAAAAAGCACACTTGTTGCAGAGGAATGTA
TCCAGTCTGCCTGAAGGACTTTCTGCTATCGCTGGAGTAAGGATAAACGT
AAGGAGATGCTCAAATGAGGTTGGAGATGGTGAATTGGCTATTGAGATTC
TCAAACGGCTGTGTCTTTTGGAGACTGAGCAAATACCAATGTCTGTGGTG
GAAATTCTCACTGCAGGAGAATCGAAGCTTGAGGTGGATTCAGCTCTTTG
CCAACTTGAAAGCATGTCTCTCATCACCAAACGCAAGTCAAATCAAGGAG
AATATAATATTACAATTCATTCACTCATTCAAGCTACCATTTTAGACATA
ATTAAAGATAGGAAAGCAGAATATTTAAACGagtgtttgaaacttttctT
CCAAGAAAtcgatcgagaaaaaaaatcattttctatccATCACACTGATT
ttggaaggaaatatttcaaccaTATTGTTAAGATCATATCATCGAAAGGT
GCTGATGGAAACCTTTATAGAATGATCGCTGAGAAAATCAGTGACATCGA
AAACATCATGTTGGCAAAAGCTGAGTATGAAAGAATCTCTCAAATCACAG
ACACACTTTTGACGAGCTGCACCTTTGACACAGAAACACAATTGACTATC
CAAAAACTCAGTGCTTCATCCTTATTCAAACAAGGAAAGTACGCAATTGC
GCGGCAAACATATGAAAGNTGTAAGAAAGTTACTAGACCGAAACAAGGCT
GGGAGAAAGATCCTGATGTTACTGATTTTACCAATGGGGCGCACTGTCGT
AGGATATCTATCAATCGAAACGAGGTTCGTCATGGTCCTAACTACATCGT
CAAATCAAAATTCGATCGAATCAAAAAATCATTGTCTGATTCGCTGCTAG
CGCTAGGAGTTCCCCAGGCAGAGATAGACAGTCTTGGACAGCCAATTAGG
TATGGTTTTGTTAATCCTGTTTCTAGTTTCACAGGTAGAGAGAAGTTGCT
GCAAGAAATTTACAAGAAAGTGGACCAAAGCCGACAGACCGTTTTGCAGT
TAGTGATACATGCATTAGCTGGC Run BLAST on NCBI protein sequence of TCONS_00009773-protein >TCONS_00009773-protein ID=TCONS_00009773-protein|Name=TCONS_00009773-protein|organism=Clytia hemisphaerica|type=polypeptide|length=624bp
CRRISINRNEVRHGPNYIVKSKFDRIKKSLSDSLLALGVPQAEIDSLGQP
IRYGFVNPVSSFTGREKLLQEIYKKVDQSRQTVLQLVIHALAGNGKTELV
RRFVHENSKEFEENVLWIKADSEASLSTSFIEIAELLNLDIKEPDGTNKS
INYILANVYNYLRDQKVLFVFDDAWDLGVVKKFLPTFKDTTVIITSQKAD
WPSQDFERIQMLSFSEDESKKLLASQCQSILTDQQIQEIIKLAGGHPLTL
QQFITALNRSLLNPDELIATFKEEKAHLLQRNVSSLPEGLSAIAGVRINV
RRCSNEVGDGELAIEILKRLCLLETEQIPMSVVEILTAGESKLEVDSALC
QLESMSLITKRKSNQGEYNITIHSLIQATILDIIKDRKAEYLNECLKLFF
QEIDREKKSFSIHHTDFGRKYFNHIVKIISSKGADGNLYRMIAEKISDIE
NIMLAKAEYERISQITDTLLTSCTFDTETQLTIQKLSASSLFKQGKYAIA
RQTYEXCKKVTRPKQGWEKDPDVTDFTNGAHCRRISINRNEVRHGPNYIV
KSKFDRIKKSLSDSLLALGVPQAEIDSLGQPIRYGFVNPVSSFTGREKLL
QEIYKKVDQSRQTVLQLVIHALAG Run BLAST on NCBI transcript from alignment at sc0000098:243314..245186 Legend: exonCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009773 ID=TCONS_00009773|Name=TCONS_00009773|organism=Clytia hemisphaerica|type=transcript|length=1873bp|location=Sequence derived from alignment at sc0000098:243314..245186 (Clytia hemisphaerica)
GCCAGCTAATGCATGTATCACTAACTGCAAAACGGTCTGTCGGCTTTGGT
CCACTTTCTTGTAAATTTCTTGCAGCAACTTCTCTCTACCTGTGAAACTA
GAAACAGGATTAACAAAACCATACCTAATTGGCTGTCCAAGACTGTCTAT
CTCTGCCTGGGGAACTCCTAGCGCTAGCAGCGAATCAGACAATGATTTTT
TGATTCGATCGAATTTTGATTTGACGATGTAGTTAGGACCATGACGAACC
TCGTTTCGATTGATAGATATCCTACGACAGTGCGCCCCATTGGTAAAATC
AGTAACATCAGGATCTTTCTCCCAGCCTTGTTTCGGTCTAGTAACTTTCT
TACANCTTTCATATGTTTGCCGCGCAATTGCGTACTTTCCTTGTTTGAAT
AAGGATGAAGCACTGAGTTTTTGGATAGTCAATTGTGTTTCTGTGTCAAA
GGTGCAGCTCGTCAAAAGTGTGTCTGTGATTTGAGAGATTCTTTCATACT
CAGCTTTTGCCAACATGATGTTTTCGATGTCACTGATTTTCTCAGCGATC
ATTCTATAAAGGTTTCCATCAGCACCTTTCGATGATATGATCTTAACAAT
AtggttgaaatatttccttccaaAATCAGTGTGATggatagaaaatgatt
ttttttctcgatcgaTTTCTTGGAagaaaagtttcaaacactCGTTTAAA
TATTCTGCTTTCCTATCTTTAATTATGTCTAAAATGGTAGCTTGAATGAG
TGAATGAATTGTAATATTATATTCTCCTTGATTTGACTTGCGTTTGGTGA
TGAGAGACATGCTTTCAAGTTGGCAAAGAGCTGAATCCACCTCAAGCTTC
GATTCTCCTGCAGTGAGAATTTCCACCACAGACATTGGTATTTGCTCAGT
CTCCAAAAGACACAGCCGTTTGAGAATCTCAATAGCCAATTCACCATCTC
CAACCTCATTTGAGCATCTCCTTACGTTTATCCTTACTCCAGCGATAGCA
GAAAGTCCTTCAGGCAGACTGGATACATTCCTCTGCAACAAGTGTGCTTT
TTCCTCTTTGAAAGTTGCAATCAGCTCATCAGGATTTAATAAGGAGCGGT
TCAGAGCTGTAATGAATTGCTGCAGAGTTAAAGGATGACCTCCAGCCAGT
TTTATAATCTCCTGGATCTGTTGGTCAGTAAGGATAGATTGGCATTGTGA
AGCAAGTAGTTTCTTTGACTCATCTTCAGAAAAAGATAGCATTTGGATTC
TTTCGAAGTCTTGAGATGGCCAATCTGCTTTCTGCGATGTTATTATAACT
GTGGTATCCTTGAATGTTGGAAGGAACTTTTTGACCACCCCTAAGTCCCA
TGCATCGTCGAATACAAAAAGAACTTTCTGATCACGAAGATAATTATAAA
CATTAGCGAGAATGTAGTTGATTGATTTGTTGGTGCCATCTGGTTCTTTG
ATGTCAAGATTCAAGAGTTCTGCAATTTCAATGAACGAAGTCGATAACGA
AGCTTCAGAATCAGCTTTAATCCATAGAACATTCTCCTCAAACTCCTTTG
AGTTCTCATGAACGAAACGTCGAACGAGCTCAGTTTTTCCGTTGCCAGCT
AATGCATGTATCACTAACTGCAAAACGGTCTGTCGGCTTTGGTCCACTTT
CTTGTAAATTTCTTGCAGCAACTTCTCTCTACCTGTGAAACTAGAAACAG
GATTGACAAAACCATACCTGATTGGCTGTCCAAGACTGTCTATCTCTGCC
TGGGGAACTCCTAGCGCTAGCAGTGAATCAGACAATGATTTTTTGATTCG
ATCGAATTTTGATTTGACGATGTAGTTAGGACCATGACGAACCTCGTTTC
GATTGATAGATATCCTACGACAC Coding sequence (CDS) from alignment at sc0000098:243314..245186 >TCONS_00009773 ID=TCONS_00009773|Name=TCONS_00009773|organism=Clytia hemisphaerica|type=CDS|length=1872bp|location=Sequence derived from alignment at sc0000098:243314..245186 (Clytia hemisphaerica)
GCCAGCTAATGCATGTATCACTAACTGCAAAACGGTCTGTCGGCTTTGGT
CCACTTTCTTGTAAATTTCTTGCAGCAACTTCTCTCTACCTGTGAAACTA
GAAACAGGATTAACAAAACCATACCTAATTGGCTGTCCAAGACTGTCTAT
CTCTGCCTGGGGAACTCCTAGCGCTAGCAGCGAATCAGACAATGATTTTT
TGATTCGATCGAATTTTGATTTGACGATGTAGTTAGGACCATGACGAACC
TCGTTTCGATTGATAGATATCCTACGACAGTGCGCCCCATTGGTAAAATC
AGTAACATCAGGATCTTTCTCCCAGCCTTGTTTCGGTCTAGTAACTTTCT
TACANCTTTCATATGTTTGCCGCGCAATTGCGTACTTTCCTTGTTTGAAT
AAGGATGAAGCACTGAGTTTTTGGATAGTCAATTGTGTTTCTGTGTCAAA
GGTGCAGCTCGTCAAAAGTGTGTCTGTGATTTGAGAGATTCTTTCATACT
CAGCTTTTGCCAACATGATGTTTTCGATGTCACTGATTTTCTCAGCGATC
ATTCTATAAAGGTTTCCATCAGCACCTTTCGATGATATGATCTTAACAAT
AtggttgaaatatttccttccaaAATCAGTGTGATggatagaaaatgatt
ttttttctcgatcgaTTTCTTGGAagaaaagtttcaaacactCGTTTAAA
TATTCTGCTTTCCTATCTTTAATTATGTCTAAAATGGTAGCTTGAATGAG
TGAATGAATTGTAATATTATATTCTCCTTGATTTGACTTGCGTTTGGTGA
TGAGAGACATGCTTTCAAGTTGGCAAAGAGCTGAATCCACCTCAAGCTTC
GATTCTCCTGCAGTGAGAATTTCCACCACAGACATTGGTATTTGCTCAGT
CTCCAAAAGACACAGCCGTTTGAGAATCTCAATAGCCAATTCACCATCTC
CAACCTCATTTGAGCATCTCCTTACGTTTATCCTTACTCCAGCGATAGCA
GAAAGTCCTTCAGGCAGACTGGATACATTCCTCTGCAACAAGTGTGCTTT
TTCCTCTTTGAAAGTTGCAATCAGCTCATCAGGATTTAATAAGGAGCGGT
TCAGAGCTGTAATGAATTGCTGCAGAGTTAAAGGATGACCTCCAGCCAGT
TTTATAATCTCCTGGATCTGTTGGTCAGTAAGGATAGATTGGCATTGTGA
AGCAAGTAGTTTCTTTGACTCATCTTCAGAAAAAGATAGCATTTGGATTC
TTTCGAAGTCTTGAGATGGCCAATCTGCTTTCTGCGATGTTATTATAACT
GTGGTATCCTTGAATGTTGGAAGGAACTTTTTGACCACCCCTAAGTCCCA
TGCATCGTCGAATACAAAAAGAACTTTCTGATCACGAAGATAATTATAAA
CATTAGCGAGAATGTAGTTGATTGATTTGTTGGTGCCATCTGGTTCTTTG
ATGTCAAGATTCAAGAGTTCTGCAATTTCAATGAACGAAGTCGATAACGA
AGCTTCAGAATCAGCTTTAATCCATAGAACATTCTCCTCAAACTCCTTTG
AGTTCTCATGAACGAAACGTCGAACGAGCTCAGTTTTTCCGTTGCCAGCT
AATGCATGTATCACTAACTGCAAAACGGTCTGTCGGCTTTGGTCCACTTT
CTTGTAAATTTCTTGCAGCAACTTCTCTCTACCTGTGAAACTAGAAACAG
GATTGACAAAACCATACCTGATTGGCTGTCCAAGACTGTCTATCTCTGCC
TGGGGAACTCCTAGCGCTAGCAGTGAATCAGACAATGATTTTTTGATTCG
ATCGAATTTTGATTTGACGATGTAGTTAGGACCATGACGAACCTCGTTTC
GATTGATAGATATCCTACGACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009773-exon-sc0000098-1491911889:243314..245186 | TCONS_00009773-exon-sc0000098-1491911889:243314..245186 | Clytia hemisphaerica | exon |
| TCONS_00009773-exon-sc0000098-1510915933:243314..245186 | TCONS_00009773-exon-sc0000098-1510915933:243314..245186 | Clytia hemisphaerica | exon |
| TCONS_00009773-exon-sc0000098-1575043694:243314..245186 | TCONS_00009773-exon-sc0000098-1575043694:243314..245186 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098 | supercontig | sc0000098:243314..245186 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0043531 | ADP binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0043531 |
ADP binding |
Blast
The following BLAST results are available for this feature:
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