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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009684 ID=TCONS_00009684|Name=TCONS_00009684|organism=Clytia hemisphaerica|type=transcript|length=2682bp
CAGTTTTATTGTTGTGTTTGGCTACTTATAGAAATCTCTTGTTATTTCTG
AATCGAGATCAAACCAGAAGAAAAAACGGCCTCAATGAACCGAAAGGATA
CCAGTATACCGTGCTTATGTTCCGGTTATTTATTCAAGCAAGGTGGAACG
GGAATTACACCAAAAAACTGGAGATTAAGATGGTTCGAATTGAAAAAGGA
TAACTGCTTATATTACTACAAGAACGAACAGGATCCTACACCGGCTGGAG
CTGTTATTTTAACGAAGTATCAAGTGACCAGAGCTGTGGAAGCGAACAAG
AGGTTTTCATTCAAGCTAACTAAAGGTGGAGCCAGAACATACTATTTTGC
TGCCAACTCAGAAGACGAAATGAAAAAATGGATGAAAAACCTCGGTGAAG
CAGTTACCATTGCAATGTCGGACCAGTCCTCGATCCCAGAATGTAGTTTA
AAGAACGTCAGCGTACCAGCAACCTCCATTATGGAACCCGATTGTCATGG
GTTTCTATGGAAACAAGGAAACTTTCACAAATCATGGCGTCGTCGTTACT
GTGTCTTGAAATACGGTTGTTTGTTTTATTATGAAGAAATCACTGACCAA
TCAGCTATCGGTGTCTTCAAACTACACAATTATACGATCGCCCATTTTGA
CATGAAGGATTCTAACAAACATGGCATCCAAGCTGTGCCGCCTGGTCGTA
AAATGCGAACATATTTCTTTTACGCTGAAAGTGAAATTGATTGGAAAAGA
TGGATGGAGGCTTTAAAACATTCGATTCAAGTCAAGAAACCTCCTGTTGG
TTCTTGAAAACTTACATTGTGGCGTTTGGGACGATGTTTCATTTGTGGTT
TTAGAAGAAAATGGTACGTTATTTCAAAATGTGGATTGCAGAAACTTTGC
CAATTCAATTCAAGATGCTGCTTGAATCGACTCGTCTAAGCAGAGCCTGA
GGGTGATACTAGGGTTGTTTTAATCTAGTACCCAGAGTCACTTGTACAAC
ACTTTGGTTTTTCTGTCTCGTgagcgttttagaaaaatcatgaGAAGGCA
CTGGATAAAAGATTATGGTTTGTTTGATGACAAAGTTTGTCTGAAAACCG
ACCCTAAAGGGAACTAAAGTTCATGTACAATGTGATTCCATTTGTGGAAA
GATTTGCTATCCTTAGAAAGGCGATGGGTGAACGACTAATACTTATCGTC
TGCTCAACGGCTATTTTTGCCTGagtactttttttgtttttaaattcgtt
ttaacaactgcaaacttttttcaagctcatcattttttttcatagcgaTT
AAGACCCCACTTCAAATGAGGTTGACTTTGaagattttctgtaaaataaT
TGGCCAATGAATTTGGAGGCTCTGATTATTTCTTTCGATGGCTTCagtat
ttgaaattttgttttacaAAAGACCACGTGCTTTGGTGGTACTAGGGTTA
GAGAATGCTGGGTATGTGGACTAGACCTCTGGGAACTGACCTTTAGAGAA
ACTAAATCTTTGCGAAAAGGTTATTCTGAGAGAATCAAAATCTTTGCGAA
AACGTTACTCTTAGAGAGACAAAATCGGCGAAAAGTGATCTTTAGAGAGA
TAATTCTTAAGAAAATTCCTAACCTCATAACCTCACAAAgagattttttt
gcttttcatGGTTTTTGCCGTCCGAACATACCAACGTATCACCTATTGCT
GTCCGTTTTTGAAAGGCTTATGTGATAGAACCGATAGAATTTAGACGATT
CTGAAAACCATCAAAAtcatagtctagcaagctagacgactaatttatac
atagtagaaataaagcaaaaagtaatgaatggaacaattttagtcgtcta
gaaacctttgtgcactaactccaaacaaaagaaaagtgtcaagattgcaa
ttataattttttcctgctcaaaatgaaagtttttcatttgagttgatttc
gttttgagagtttgttgatgcttgataaattgttttctcgctacgcaagt
ttctgcgtagctagccggggtatctataaggctggaacgccggattcttc
cagtcgtttatacataCTAAATCccatattattattagtattattagtat
tacacgcattataaacgactccagtctatcaaaatcataaaaacgtACGA
ATCAGACAATTTGTACGAGGTTGGGCCCATCCGTAAATGGAGCAATTCCC
ACTACTTTTTTCCTAGAAAATAGGAAATGCCCAGATTCTGTAAAAATTTG
TatatatttatataaaaagatGTATTTTTTCTTGTGTGCAAAATAGTGTT
TTTGTATTTTAGAGAGTCCTAAAGTGAATACTGGGTGGTTTTGATGTATT
GCTTTTATAACTATATactttataatatttttatttgagttttatttttc
tttcttgaatttttctttcagtgagCGCAAACTGAATTTGTACCAAAAAA
TAAgatatctttttcaaaatattattttctcaaTATGCTTTTAataatct
ttattttttagGGAGAAGAATGAtatagattttagttttatcCTTTTAAG
caaagttttatattttatgatttttacacTTATCTTAGTTTCTATAAATT
TGAGATcgttgatattttgaaattgttaaaattgatttatcctttgaaaa
agaaattacatAATACATAGTTAATTGTTAAT Run BLAST on NCBI transcript from alignment at sc0000098:19178..35116+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009684 ID=TCONS_00009684|Name=TCONS_00009684|organism=Clytia hemisphaerica|type=transcript|length=15939bp|location=Sequence derived from alignment at sc0000098:19178..35116+ (Clytia hemisphaerica)
CAGTTTTATTGTTGTGTTTGGCTACTTATAGAAATCTCTTGTTATTTCTG
GTATGTGATATTTTAACTTCTTAGTCGAGTGATTAGAAATTGATACTAGT
AGAATTTTCATCATCTACGTAAAACATTGAAATGACATCATCATATCGTA
GTTTCCAAGTAAAGCAtggaatttttctttaaaaattagcTGACGAAAAC
TATCTACAACGGGGCCACCCAGcgatttgcgtgaatgcgttaATACGTGA
ATTTGGACAAAACGAATTGTGCGATTGCATGAATTAAAGGCCTGCCTGGG
GGCGGGGGGGGCTTTGAAACAagcattgaaaaattttaaccaTTTTACTG
TTTATTTCTGGTATATATTTCTGAAATCTTGCTCTACACTGACCTCCATG
TcatcaaaacttaaaaaaaacaaacattgagaGACACATACTGACTTCAC
TATGGGGTAGTCTATTCCAGACAATTTcacttttgatattttgtgataGA
GGGGGTCAATGAAACATTATGCAAAATGCAACCAGTATTGGGTTTCTCGG
AAAATGAAATAAGGGGGGCGCTGATGAGCGATAAGGGGCGATGACcgagt
ggtcaaaggcgtcagcgtttCAAACCAGTGTTtcgtggttcgaatccccg
ctcttTCCAACGCACCGTTCTGTTCATAGATAGCCTAGCCGGCTGGctgt
ggaccccgtgaaaacaatcaaaagactgACTTAAAGTCCTAGATTTTTGG
CCTATTTACTTTATCTCTATCTCGGACTCTATCTATCCATCAGGAAGGTC
AAAATATACTTTGAAAATCCTTACTTTACTTTTTCTCTACAGAATCGAGA
TCAAACCAGAAGAAAAAACGGCCTCAATGAACCGAAAGGATACCAGTAAG
TATTTCACCCGATTTTTCACCCGATGTTTCATCCGATATTTCACCCGATA
TTTCACCCGATTTTTCACCGGATATTTCACCCGGCATTTCACCTAGCATT
TACTTTAAAATCCCGTTGCAAGTTCTTGTAATAATGACGTTATACATGTT
TTTGCGACTTCTGCGATAATTTTTCCTCTTTCGCCAAAATTATCTCCGAG
AATTTTAAACATGgcggcaattcgcgaaagtgtGTTTTCTATTCTTGAAA
TTCGATCTTTGTCAAATAAAGGATCGCTACTTGCCTTGTAATATTCAGAT
TTTATTGTCATGACAACAACAAATAACAAGAAACAAGACTCTTTCTGATA
TTATAAGCAACCACCTTTCGTTTTTCATTGATTTAAACATGCACAAACTA
TTACATTCCCAAAATAAATCCAAGTCCAACATCACATCTTTGATCATGTC
ATAATCTAATTTAAGATCACGGcataatacaccgtttaggagtctcgcta
tcttcacggtactccattaNgcgggaatttaatttcgcggttgcaggata
tttttgaccaaaaacgttagtaaataagcaaaaaacctgttttaaggctt
gaaatagtacgACTTTGGGAGAATGCGTGaaatagattaaatttcgcggg
aatttaatttcgcggtttgacgattttgtaaaatttcgcgggaacttaat
ttcgcggttttaggcaaaatccgcgaaaaccgcgaaattttgttcccgcg
aaaatttcttcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNacagatcagaaagcaaagtaataattctattgcagagcgagt
atgagaaataatcttaacgaataaataaaccagctggaagtttagctttt
ctaagtgattacacatgcactttcttgcctaaagaaccaaccccaccccc
gcccactcatcctcgactaaaaagttcaaaatttgatCTAAAGGAGAtga
acatttagaagtcaatatttccaagttcttgatttgattgtccagataaa
atttcggggagaaaaatagccttaaattagaggccacaggcttttagcta
agcattatttttttctgttgggataatacttgggtNaatggtaggtaaaa
atgcgcactttagtactgtgaaaggttagaggaatgtaaacattgtgaat
ttttttctctcctttaaagagaatgattcagatatttgaacatgatctca
atgataattttataagtctctcctgaaaatttcacaaaaattcatcaaga
ggaaaagaagttatgaNtgtgtatgtaataaatagtggtatatttggaaa
aaacctgtttcgggtttgaaaaatcttcaaaaggaacggtcgccccagcc
aatgaaattacgactaAGTctaaaaacgatcattttcagccataacactg
tgaaaattactcaaatcttgttcaaatttaacacaggaattgtttttttg
tatcctttactgaattctcatagtgatatgttgtaaaaaatctgtcgggt
ttgaaaaatcaNaaaataaaccagctgcgctggaagctccggcttaagag
attaaaatatgtgaaagatgagcttgttgagttagttgtgttagaacgtt
gcccacaaactgataccctaagggaagaaattttcgcgggaatttaattt
cgcggttggtcaaattattttttttcgcgggaatttaatttcgcggttca
tNATACTGTGAAAActtttccaatcttgttcaaatttacacaggaattgt
gttttagtatcctttattgaattctcatagtgatatgtttgtaaaatatc
tgtgttgagtttgaaaaatcaaaaggaacggtcgcccagtcaaaaaatga
tgaatacaAAAAAACAGGATCATTTTCAGCCATACACATaacaccacaaa
aactgctcagatcgttttcaaatttgcactgtaatgttgtaattttagta
ttctctttcgaattccaatggatgtgtgtttgaaagtttcattctattgt
caagttacagagttttatggttttggTTTTGTGCGTCTATTAGAACTAAA
actagagaagttagccatatgcaagatttaagcactcgagcagctgacga
ttcatggccaaaatttctccaaagtctttccacattgttagaccagtatg
catcaaacttctcatgaagaatcatgtccaaaacatcatgaataaggatg
aaaatgatcacatctttcactgagatttgcagctAAGCCCACTTTCGGCC
AGtcatctttttctaaaatactttcgcaatattatcgaaatccagatgat
ccgtttttattaaatcggaatagatcatcggattagataaacaaaaaaaa
aaatgtcttgaccttgACCGtcgttgtcggaagagagaattaaaggccct
aggccggagcaacaatggaaaattggattgacgcgtgcgcatTCGACACT
CTTAAACGGTGTATTATATCATTTCCAATTATGTATTGCCTACCATACTA
CCTACTTGAATATCTTGGCGTCCCCCTCTGTTGATCATTTATATCTGTAT
AGTGCAGATCGCATACCTTATcgtggaaaaaaatgtcgggggaaagtgac
aaaCATTTTGAGAGGGTGAtgaaattttcccccgacgattttttccccga
tattttatcacccgaccaaaacttttacccgattttttaaacccaaacca
aaattaaaatctaaattttttacacctttagtaagcgaaattagtgcttt
aaacgtcggattaaaagatcttttttcgagctagtgaaggaaactatttc
atttggacaatttagttgggtgaaagtgactgaatagtaaatttggtcgg
ggaaaagtgacgaatttgaaatttagatcgggggaaagtgacgaaaatgc
ctataggtgacgaaatttttccccgacgaaaaaaaaccccgactaaataa
aactctgacatttttttccctgataaggtatTATGCCTTGCCAATGTATC
TTCTATCAGagtagtgtggtcgtgttacaaaaatacaggctgtttgtagg
aaaaaaataagatctagctgaaactttctccagaccttctctataggatg
gttatacCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNatagtttttcgagagctttcgaatggtatacttgaaaat
gtctgaaaatgagtttgaaattttcaaaaaatttcgcccttagggttttg
cctgggaaaaaaagaaatatcccaaaaaagggatgttccaccagtgggat
tttaggggaatttttcctgaggtataaccatcctatagagaaggtctgga
gaaagtttcagctagatcatattgttttcccgtaaattatgctgAACGAC
CCAACTAGAGTGGTTTTTAATGTTCCAGATATTTCAGCGGGATAAGATTT
CAGAGGGTTCTTTGCGGTTGAACTTTTATGAGTATGACTTATTTATTTGG
TGGACAATTTCACtgcaataaagaaaaaaaattgcttcttttctaaaaaa
cttttcgaCTTAATAATGTGTTTCACGGGCGAGAAAATCTTCCATATGAC
TTGTATTATTGCAGTTCCCCGGAAGTGAGCtatttattatatatatttAA
TATTCCCATTATTTTGTTGTATAATTGCTTTTTCCGTACTTTAGGTATAC
CGTGCTTATGTTCCGGTTATTTATTCAAGCAAGGTGGAACGGGAATTACA
CCAAAAAACTGGAGATTAAGATGGtaagaatgaatgaatgaatgaatgaa
tgattgattgaatgattgaatgattgaatgaatgaatgataaGTAAAGAA
TAAGAGAATTAACGAATGATAAATAAAGATATTGGTGTTGGTCTATAGAT
TTCCATATCTGGATCGTTCATTGTTTTTGATTTACATAAGATTTTCTAGA
AGTAGAACAGTGCTTCATCCGAGATCGTATCGAAGCTTTCTGTTGTAGAA
ACCAAAGTTGGTTGCACAGCGTTCTAGAAAACTTCATGACACAGCAAGTA
GTGGCAGTGGACTCAAGCTAGTTGACCTGGGAATCGCCACACAGTTAGTA
GTGGCAGTGGACTCAAGCTAGTTGACCTGGGAATCGCCACACAGTTAGTA
GTGGCAGCGGACTCAAGATAGTTGACCTGGGAATCGCCACACAGTTAGTA
GTGGCAGTGGACTCAAGCTAGTTGACCTGGGAATCGCCACACAGTGAGTA
GTGGCAGTGGACTCAAGCTAGTTGACCTGGGAATCGCCACACAGCAAGTA
GTGGCAGCGGACTCGACAGACCTGGGGATCGCCATTAGAGACCGTGACAG
AATCCATTGCTTCGATTTGCGGTCGAGCAAggatgatgaaaatgaaaatc
tgatGCTaactttttccttctttttcttctagGTTCGAATTGAAAAAGGA
TAACTGCTTATATTACTACAAGAACGAACAGGTTTGCTACCTTAAAAATT
TCCATTGTTTTAATGAAGTGTCTCCTTCTTATAAAGATTTGGCCATAATT
ATCTCAGAAACTTCTCTATGTTTTCTGGTAAATTCGTATCTTTTAAAGCA
CAGCTGACGGTCTCTAATTGGATGTTTGACTGTTCGatatgctcccttat
tcgatgatatTGAAAGCCACCCTCAGCAAGAAACtatcataaacgacgct
ctatcGTTCGACACGCTCGACACGCTCCCTTATTTGAGAGAGCGCTAACT
GTACACTTCATTTTGCGCTTAAACTTTTGGGGATCTTAAATGATTTCCGC
AGACATAGAGTGGGGTACCCAGTTGGCGTGAGTTTAAAGATTCCCGTTTA
CTTATATCGGCAGTATATTTTGCTGGTACTTCTTTTCAGTTCTTCTGCGT
GGACTAATTTCTGGCGAGGAAATATTTCATGTTTTCTTAACATGAAATGC
CATaacgaaaaataggaaaaaataaaactattacgaaagttttcactttt
tcaatTACTGTTACAAAATTGTGCACCCTAACTGCTATGGTGCATTTTTA
TTCCTAAATTTTTCTCTATAAGCTGCTAAAAGATACTTCTTTCAGACTCC
GAACCTGATTTTCTCTGGAACGCCATAGATTTTgttaaattcatgatatt
catgacgtaatgttttctacggaaacaccccggttttagccattagtgtc
aaatttaaactagacaaaagttgtataaaatttgccactactgccAAAAa
acggggtctttccgtagaaaacattacatcatgaatatcataaatGAGTA
CCCAAGTCGAAATTCACACCAACTGGGTTATGACGCCAACTGGATACCAC
ACTCTAGTGTAGTATCAAAAAAAATAAGCTTTACATTTGACGTGGTTTGC
TTTCAGGATCCTACACCGGCTGGAGCTGTTATTTTAACGAAGTATCAAGT
GACCAGAGCTGTGGAAGCGAACAAGAGGTTTTCATTCAAGCTAACTAAAG
GTGGAGCCAGAACATACTATTTTGCTGCCAACTCAGAAGACGAAATGAAA
AAGTAAGACTTCCACTTAATACAGTTTTCGGTGTTAAAAGTTGTTCTTAG
ATGGTATTAATTTTTCATGCGGTACACATGTGCACTATGTATTTTTGACG
TCATCGtcatttgggccaaaaaacggctaaaaaacgggttttttggactt
tgtgaaaattggatcattaaatttttttgattttttgcatgaaagtaggg
taccatcataggtaaaagatagctcaagcagatttttgctaaaaaattta
tttgtcttaaaaaacacatgtttatctataagaatcactattaagaagca
tacatcaatgttcttagtcaaattactcaatttctttatgagatagaagt
tttttttgcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGTCTGGGTAAATATTTA
AGAATCTTGGCAGACagacaagaaaaaaattcaaaaatttactgTTTCTA
GTGGTTATATGGTTCTATAATTACCGTGTAATGACTGAAAATATCCTTTT
ATTTCACTTTCTATCTCTAGATGGATGAAAAACCTCGGTGAAGCAGTTAC
CATTGCAATGTCGGACCAGGTATGATTTGAATATCATTTCTTCTCGTTTT
CCATATACAGTGCAGCCTCTTTAACTGGgacttctataactcgaatcgAA
GTACAAGTGTCTATCACGTATGAGAAAATTAAGCATAAATCAGTGAAGTC
TCTTTAACCCAAACCTCGATAACTCGAATGTGTCCTTAACTCgtacaagt
tttatggtcccaaCAGTTAACAATAACTTATAAACCTTGCTCCATACAAT
CGAATGTCACTCGTACAGGTTATGGTCCCAACAGTTAACAATAACTTATA
AACCTTGCTCCATACAATCGAATGTCACTCGTACAGGTTATGGTCCCAAC
AGTTAACAATAACTTATAAACCTTGCTCCATACAATCGAATGTCACTCGT
ACAGGTTATGGTCCCAACAGTTAACAATAACTTATAAACCTTGCTCCATA
CAATCGAATGTCACTCGTACAGGTTATGGTCCCAACAGTTAACAATAACT
TATAAACCTTGCTCCATACAATCGAATGTCACTCGTACAGGTTATGGTCC
CAACAGTTAACAATAACTTATAAACCTTGCTCCATACAATCGAATGTCAC
TCGTACAGGTTATGGTCCCAACAGTTAACAATAACTTATAAACCTTGCTC
CATACAATCGAATGTCACTCGTACAGGTTATGGTCCCAACAGTTAACAAT
AACTTATAAACCTTGCTCCATACAATCGAATGTCACTCGTACAGGTTATG
GTCCCAACAGTTAACAATAACTTATAAACCTTGCTCCATACAATCGAATG
TCACTCGTACAGGTTATGGTCCCAACAGTTAACAATAACTTATAAACCTT
GCTCCATACAATCGAATGTCACTCGTACAGGTTATGGTCCCAACAGTTAA
CAATAACTTATAAACCTTGCTCCATACAATCGAATGTCACTCGTACAGGT
TATGGTCCCAACAGTTAACAATAACTTATAAACCTTGCTCCATACAATCG
AATGTcactttaactcgaatgtcacCTTAACTCGAATGGGTTTTATGGTC
CCAacagttaacaataccttaaaAGCCTTACTCCATACAATCGAATGTCA
CTCGTATAAGTTTTATGGTCCCAacagttaacaataccttaaaAGCCTTG
CTCCATACAATCGAATGTcactttaactcgaatgtcacCTTAACTCgtac
aagttttatggtcccaaCAGTTAACAATAACTTATAAACCTTGCTCCATA
CAATCGAATGTcactttaactcgaatgtcacCTTAACTCGAATGGGTTTT
ATGGTCCCAacagttaacaataccttaaaAGCCTTACTCCATACAATCGA
ATGTCACTCgtacaagttttatggtcccaacagttaacaataccttaaaA
GCCTTACTCCATACAATCGAATGTCACTCGTACAGGTTATGGTCCCAACA
GTTAACAATAACTTATAAGCCTTGCTCCATACAATCGAATGTcactttaa
ctcgaatgtctccttaactcggacaagttttatggtcccaacagttaaca
ataccttaaaAGCCTTACTCCATACAATCGAATGTCACTCGTACAGGTTA
TGGTCCCAACAGTTAACAATAACTTATAAGCCTTGCTCCATACAATCGAA
TGTcactttaactcgaatgtctccttaactcggacaagttttatggtccc
aacagttaacaataccttaaaAGCCTTACTCCATACAATCGAATGTCACT
CGTACAGGTTATGGTCCCAACAGTTAACAATAACTTATAAGCCTTGCTCC
ATACAATCGAATGTcactttaactcgaatgtctccttaactcggacaagt
tttatggtcccaacagttaacaataccttaaaAGCCTTACTCCATACAAT
CGAATGTCACTCGTACAGGTTATGGTCCCAACAGTTAACAATAACTTATA
AGCCTTGCTCCATACAATCGAATGTcactttaactcgaatgtctccttaa
ctcggacaagttttatggtcccaacagttaacaataccttaaaAGCCTTA
CTCCATACAATCGAATGTCACTCGTACAGGTTATGGTCCCAACAGTTAAC
AATAACTTATAAGCCTTGCTCCATACAATCGAATGTcactttaactcgaa
tgtctccttaactcggacaagttttatggtcccaacagttaacaatacct
taaaAGCCTTACTCCATACAATCGAATGTCACTCGTACAGGTTATGGTCC
CAACAGTTAACAATAACTTATAAGCCTTGCTCCATACAATCGAATGTcac
tttaactcgaatgtctccttaactcggacaagttttatggtcccaacagt
taacaataccttaaaAGCCTTACTCCATACAATCGAATGTCACTCGTACA
GGTTATGGTCCCAACAGTTAACAATAACTTATAAGCCTTGCTCCATACAA
TCGAATGTcactttaactcgaatgtctccttaactcggacaagttttatg
gtcccaacagttaacaataccttaaaAGCCTTACTCCATACAATCGAATG
TCACTCGTACAGGTTATGGTCCCAACAGTTAACAATAACTTATAAGCCTT
GCTCCATACAATCGAATGTcactttaactcgaatgtctccttaactcgga
caagttttatggtcccaacagttaacaataccttaaaAGCCTTACTCCAT
ACAATCGAATGTCACTCGTACAGGTTATGGTCCCAACAGTTAACAATAAC
TTATAAGCCTTGCTCCATACAATCGAATGTcactttaactcgaatgtcgC
CTTAACTCGAATGGGTTTTATGGTCCCAACAGTTAACAATAACTTATAAA
CCTTGCTCCATACAATCGAATGTcactttaactcgaatgtctccttaact
caaacaaatttgcgTTACCCGTGCGTTaccgagttatagagactccactg
tattctTGCCTAAGTCCATGTCTTGTTCAAAATGATTAAAACAAAGAGTT
TTtctatacagttgacgctctctaatttgacgttctatcattcgatacac
tccattattcgataatattgaagtCACCGTCTGCatacaagaaactctca
taaataaCACTCCCTTATTTAATGAAAATCCAacctcttgaaaatcgaat
tagagagcgtcaactgcagTGCGATTTCTTTCTACTTTTCCTCTTAATct
taggtgcctaataaacgcccctcccccCGGCTTGTTAATTGTTCGATTTT
TCTCCAACCCCATCAGGACCCCCATCCCGTTTATTAATTCTTGAAAACAa
tttcagctgtcaaaagaaAAACCTCTTATTCTGCTCTAAAAAGCTTGGTT
CTAGTCTAAAATTACCTTTTTTGGGGGATTTTTTGAGGTACTGTCAATCA
GCTCCCCTTATCGTTTATTAGACACCCGAGGGTAAGTTGTGAATGAATTT
CagaagattttcataccactaCTATTTCTATTTTCAGTCCTCGATCCCAG
AATGTAGTTTAAAGAACGTCAGCGTACCAGCAACCTCCATTATGGAACCC
GATTGTCATGGGTTTCTATGGAAACAAGGAAACTTTCACAAATCATGGCG
TCGTCGTTACTGTGTCTTGAAATACGGTTGTTTGTTTTATTATGAAGAAA
TCACTGACCAATCAGCTATCGGTGTCTTCAAACTACACAATTATACGATC
GCCCATTTTGACATGAAGGATTCTAACAAACATGGCATCCAAGCTGTGCC
GCCTGGTCGTAAAATGCGAACATATTTCTTTTACGCTGAAAGTGAAATTG
ATTGGAAAAGGTAGAAacttattgggcttttccagaaaataaattcaata
tTGGGGGTGGAGAATATGacactttttggaaatttacccccacccctgga
cattgtgacttttgaccccccggacagcaggtccaTGGAGAGCccatttt
aagaaaaatggCCTCTATTTTTTAAATAGGTCTCTAGTAAGACGGTAAGA
CCAGATATTCACCTTTGAGTTTTCTCGATCTTGGTATGAATCAGAGTTTG
CTTTAGGAGAATTTTGAAGTCATAAGTTAGCAGAGCAGAGCACAGaaagt
attttttaatatacGTGTTTTAATTTGGGCACGCCAAGCAAAAAAGGATT
TCACACGGGGGGTAAAATTCTACATTTGAATTAGCCACAGATATCATAGT
CCTTTACAAACTAAATAACTGTTCACAAATTTCCCAtggaagtgtgtcca
gtttGGAAGGCGACTAGTCCGCCATGTTCACTAATTCACTCTAAATTTTC
GAACGATTGAATGCCCTGACGACCAAATTGAAAACGAAGTTTGACCCAGT
CAATTAATTAAGGATCAGTGGAATTGATCGTTAATCTTTCATAATTTATT
GTTTAGATGGATGGAGGCTTTAAAACATTCGATTCAAGTCAAGAAACCTC
CTGTTGGTTCTTGAAAACTTACATTGTGGCGTTTGGGACGATGTTTCATT
TGTGGTTTTAGAAGAAAATGGTACGTTATTTCAAAATGTGGATTGCAGAA
ACTTTGCCAATTCAATTCAAGATGCTGCTTGAATCGACTCGTCTAAGCAG
AGCCTGAGGGTGATACTAGGGTTGTTTTAATCTAGTACCCAGAGTCACTT
GTACAACACTTTGGTTTTTCTGTCTCGTgagcgttttagaaaaatcatga
GAAGGCACTGGATAAAAGATTATGGTTTGTTTGATGACAAAGTTTGTCTG
AAAACCGACCCTAAAGGGAACTAAAGTTCATGTACAATGTGATTCCATTT
GTGGAAAGATTTGCTATCCTTAGAAAGGCGATGGGTGAACGACTAATACT
TATCGTCTGCTCAACGGCTATTTTTGCCTGagtactttttttgtttttaa
attcgttttaacaactgcaaacttttttcaagctcatcattttttttcat
agcgaTTAAGACCCCACTTCAAATGAGGTTGACTTTGaagattttctgta
aaataaTTGGCCAATGAATTTGGAGGCTCTGATTATTTCTTTCGATGGCT
TCagtatttgaaattttgttttacaAAAGACCACGTGCTTTGGTGGTACT
AGGGTTAGAGAATGCTGGGTATGTGGACTAGACCTCTGGGAACTGACCTT
TAGAGAAACTAAATCTTTGCGAAAAGGTTATTCTGAGAGAATCAAAATCT
TTGCGAAAACGTTACTCTTAGAGAGACAAAATCGGCGAAAAGTGATCTTT
AGAGAGATAATTCTTAAGAAAATTCCTAACCTCATAACCTCACAAAgaga
tttttttgcttttcatGGTTTTTGCCGTCCGAACATACCAACGTATCACC
TATTGCTGTCCGTTTTTGAAAGGCTTATGTGATAGAACCGATAGAATTTA
GACGATTCTGAAAACCATCAAAAtcatagtctagcaagctagacgactaa
tttatacatagtagaaataaagcaaaaagtaatgaatggaacaattttag
tcgtctagaaacctttgtgcactaactccaaacaaaagaaaagtgtcaag
attgcaattataattttttcctgctcaaaatgaaagtttttcatttgagt
tgatttcgttttgagagtttgttgatgcttgataaattgttttctcgcta
cgcaagtttctgcgtagctagccggggtatctataaggctggaacgccgg
attcttccagtcgtttatacataCTAAATCccatattattattagtatta
ttagtattacacgcattataaacgactccagtctatcaaaatcataaaaa
cgtACGAATCAGACAATTTGTACGAGGTTGGGCCCATCCGTAAATGGAGC
AATTCCCACTACTTTTTTCCTAGAAAATAGGAAATGCCCAGATTCTGTAA
AAATTTGTatatatttatataaaaagatGTATTTTTTCTTGTGTGCAAAA
TAGTGTTTTTGTATTTTAGAGAGTCCTAAAGTGAATACTGGGTGGTTTTG
ATGTATTGCTTTTATAACTATATactttataatatttttatttgagtttt
atttttctttcttgaatttttctttcagtgagCGCAAACTGAATTTGTAC
CAAAAAATAAgatatctttttcaaaatattattttctcaaTATGCTTTTA
ataatctttattttttagGGAGAAGAATGAtatagattttagttttatcC
TTTTAAGcaaagttttatattttatgatttttacacTTATCTTAGTTTCT
ATAAATTTGAGATcgttgatattttgaaattgttaaaattgatttatcct
ttgaaaaagaaattacatAATACATAGTTAATTGTTAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009684-exon-sc0000098-1491911889:19178..19227 | TCONS_00009684-exon-sc0000098-1491911889:19178..19227 | Clytia hemisphaerica | exon |
| TCONS_00009684-exon-sc0000098-1510915933:19178..19227 | TCONS_00009684-exon-sc0000098-1510915933:19178..19227 | Clytia hemisphaerica | exon |
| TCONS_00009684-exon-sc0000098-1575043694:19178..19227 | TCONS_00009684-exon-sc0000098-1575043694:19178..19227 | Clytia hemisphaerica | exon |
| TCONS_00009684-exon-sc0000098-1491911889:20020..20072 | TCONS_00009684-exon-sc0000098-1491911889:20020..20072 | Clytia hemisphaerica | exon |
| TCONS_00009684-exon-sc0000098-1510915933:20020..20072 | TCONS_00009684-exon-sc0000098-1510915933:20020..20072 | Clytia hemisphaerica | exon |
| TCONS_00009684-exon-sc0000098-1575043694:20020..20072 | TCONS_00009684-exon-sc0000098-1575043694:20020..20072 | Clytia hemisphaerica | exon |
| TCONS_00009684-exon-sc0000098-1491911889:24522..24600 | TCONS_00009684-exon-sc0000098-1491911889:24522..24600 | Clytia hemisphaerica | exon |
| TCONS_00009684-exon-sc0000098-1510915933:24522..24600 | TCONS_00009684-exon-sc0000098-1510915933:24522..24600 | Clytia hemisphaerica | exon |
| TCONS_00009684-exon-sc0000098-1575043694:24522..24600 | TCONS_00009684-exon-sc0000098-1575043694:24522..24600 | Clytia hemisphaerica | exon |
| TCONS_00009684-exon-sc0000098-1491911889:25260..25308 | TCONS_00009684-exon-sc0000098-1491911889:25260..25308 | Clytia hemisphaerica | exon |
| TCONS_00009684-exon-sc0000098-1510915933:25260..25308 | TCONS_00009684-exon-sc0000098-1510915933:25260..25308 | Clytia hemisphaerica | exon |
| TCONS_00009684-exon-sc0000098-1575043694:25260..25308 | TCONS_00009684-exon-sc0000098-1575043694:25260..25308 | Clytia hemisphaerica | exon |
| TCONS_00009684-exon-sc0000098-1491911889:26234..26379 | TCONS_00009684-exon-sc0000098-1491911889:26234..26379 | Clytia hemisphaerica | exon |
| TCONS_00009684-exon-sc0000098-1510915933:26234..26379 | TCONS_00009684-exon-sc0000098-1510915933:26234..26379 | Clytia hemisphaerica | exon |
| TCONS_00009684-exon-sc0000098-1575043694:26234..26379 | TCONS_00009684-exon-sc0000098-1575043694:26234..26379 | Clytia hemisphaerica | exon |
| TCONS_00009684-exon-sc0000098-1491911889:28748..28796 | TCONS_00009684-exon-sc0000098-1491911889:28748..28796 | Clytia hemisphaerica | exon |
| TCONS_00009684-exon-sc0000098-1510915933:28748..28796 | TCONS_00009684-exon-sc0000098-1510915933:28748..28796 | Clytia hemisphaerica | exon |
| TCONS_00009684-exon-sc0000098-1575043694:28748..28796 | TCONS_00009684-exon-sc0000098-1575043694:28748..28796 | Clytia hemisphaerica | exon |
| TCONS_00009684-exon-sc0000098-1491911889:32265..32587 | TCONS_00009684-exon-sc0000098-1491911889:32265..32587 | Clytia hemisphaerica | exon |
| TCONS_00009684-exon-sc0000098-1510915933:32265..32587 | TCONS_00009684-exon-sc0000098-1510915933:32265..32587 | Clytia hemisphaerica | exon |
| TCONS_00009684-exon-sc0000098-1575043694:32265..32587 | TCONS_00009684-exon-sc0000098-1575043694:32265..32587 | Clytia hemisphaerica | exon |
| TCONS_00009684-exon-sc0000098-1491911889:33184..35116 | TCONS_00009684-exon-sc0000098-1491911889:33184..35116 | Clytia hemisphaerica | exon |
| TCONS_00009684-exon-sc0000098-1510915933:33184..35116 | TCONS_00009684-exon-sc0000098-1510915933:33184..35116 | Clytia hemisphaerica | exon |
| TCONS_00009684-exon-sc0000098-1575043694:33184..35116 | TCONS_00009684-exon-sc0000098-1575043694:33184..35116 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098 | supercontig | sc0000098:19178..35116 + |
Blast
BLAST of TCONS_00009684 vs. Swiss-Prot (Human)
Match: PKHA6 (Pleckstrin homology domain-containing family A member 6 OS=Homo sapiens GN=PLEKHA6 PE=1 SV=4) HSP 1 Score: 85.1149 bits (209), Expect = 9.722e-17 Identity = 48/147 (32.65%), Postives = 84/147 (57.14%), Query Frame = 1
Query: 73 KTASMNRKDTSIPCLCSGYLFKQGGTGITPKNWRLRWFELKKDNCLYYYKNEQDPTPAGAVILTKYQVTRAVEAN----KRFSFKLTKGGARTYYFAANSEDEMKKWMKNLGEAVTIAMSD-QSSIPECSLKNVSVPATSIMEPDCH 498
++ SM R + + P +G+LFKQ +G+ K W RWF L D CL+YYK+E++ + G++ L ++V AV+ + ++ +FK G RTY+F+A S +E + W++ +GEA + + Q S+P+ + P + + P H
Sbjct: 48 RSHSMKR-NPNAPVTKAGWLFKQASSGV--KQWNKRWFVLV-DRCLFYYKDEKEESILGSIPLLSFRVA-AVQPSDNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAARVQIPPAQKSVPQAVRHSHEKPDSENVPPSKH 189
The following BLAST results are available for this feature:
|
