Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009674 ID=TCONS_00009674|Name=TCONS_00009674|organism=Clytia hemisphaerica|type=transcript|length=1066bp
GAGAGACAAGCAgaacaaattttttgttcaGCATGATGTGTGGGTTAATA
AAAGTATTATTGCTGTTGGTTTGTGTATCTGTTGTGTTAACAGCACCAGT
GAAAGTTTCTCAATGTCCGAAGAAATGTACTTGCCAGCTTAGTGGAACTT
TTGTCCAATGTCCTGGCAAAGTCACAAGGAAAGATTGGGAAAGAATTGGT
GCAGAAATAAGTGAGAATGCAATTCAATTGGAAGTTGACTTTCTGGATTT
TGAATACGTGCAAGTacattgttttaaaaagttgaagTCTCTGACGAATT
TGAGGATACTTGGTGGACGAGTTGTTTTGTTTCCGACAGGTTTATCAGAC
AAGTTCCCAGCACTGAAGATTATTACATTTATCAATAACAAGATTAGACA
TTTAACACCCTCTATTTTTGAAGGACTGGAAGAAATTCTGAACTTAGATT
TAGCTGGAAATACCCTGAAAAGGATTTCAAAGAATGTCTTCAAAGGTTTA
TCCAAATTGAAACTATTGAATTTGGAGAGAAACCAAATTGAATGTCTTGA
CAATGACGCTTTTGATGGTTTATCAGGTTTAGGATTATTGTCATTGAACA
ATAACCGATTGACAATGCTACCAGATGGACTTTTCAAATCGTTCAAAGAA
GCACCTCTATTTCTATTGTTCGCAAATAATAGAATCACCAGATTACAGAA
AAACTTGTTTCAACCTTTCTTGAAAATCTCAGCATTCAATGTCAGTAATA
ACAATATATCTGAGATTGAAACTGGAGCTTTTGATAACTTGTTACCTTTC
CCTGGTTTTGGGATTGATTTATCACATAATCCCATATTATGCAATGCTCA
ATCCAATCCAACAGACTTCAGCATGGGAAGTATTCGGGTTACCGGAACTT
GTGGTTCAACACCGGTACTCCCGTTCCAGATCAGGCGTATTGTGGAATAA
GCTATCAAacaacaattttcttaaaaagtcttTCTGTCGCTTCTTTGCTA
TGGGCTTCAAATATCTTACCCTGAAGTTAAAGATTTTGCGTCGCTTCATT
GCTATGGACTTCAAAT Run BLAST on NCBI protein sequence of TCONS_00009674-protein >TCONS_00009674-protein ID=TCONS_00009674-protein|Name=TCONS_00009674-protein|organism=Clytia hemisphaerica|type=polypeptide|length=315bp
ETSRTNFLFSMMCGLIKVLLLLVCVSVVLTAPVKVSQCPKKCTCQLSGTF
VQCPGKVTRKDWERIGAEISENAIQLEVDFLDFEYVQVHCFKKLKSLTNL
RILGGRVVLFPTGLSDKFPALKIITFINNKIRHLTPSIFEGLEEILNLDL
AGNTLKRISKNVFKGLSKLKLLNLERNQIECLDNDAFDGLSGLGLLSLNN
NRLTMLPDGLFKSFKEAPLFLLFANNRITRLQKNLFQPFLKISAFNVSNN
NISEIETGAFDNLLPFPGFGIDLSHNPILCNAQSNPTDFSMGSIRVTGTC
GSTPVLPFQIRRIVE Run BLAST on NCBI transcript from alignment at sc0000097:544996..546061 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009674 ID=TCONS_00009674|Name=TCONS_00009674|organism=Clytia hemisphaerica|type=transcript|length=1066bp|location=Sequence derived from alignment at sc0000097:544996..546061 (Clytia hemisphaerica)
ATTTGAAGTCCATAGCAATGAAGCGACGCAAAATCTTTAACTTCAGGGTA
AGATATTTGAAGCCCATAGCAAAGAAGCGACAGAaagactttttaagaaa
attgttgtTTGATAGCTTATTCCACAATACGCCTGATCTGGAACGGGAGT
ACCGGTGTTGAACCACAAGTTCCGGTAACCCGAATACTTCCCATGCTGAA
GTCTGTTGGATTGGATTGAGCATTGCATAATATGGGATTATGTGATAAAT
CAATCCCAAAACCAGGGAAAGGTAACAAGTTATCAAAAGCTCCAGTTTCA
ATCTCAGATATATTGTTATTACTGACATTGAATGCTGAGATTTTCAAGAA
AGGTTGAAACAAGTTTTTCTGTAATCTGGTGATTCTATTATTTGCGAACA
ATAGAAATAGAGGTGCTTCTTTGAACGATTTGAAAAGTCCATCTGGTAGC
ATTGTCAATCGGTTATTGTTCAATGACAATAATCCTAAACCTGATAAACC
ATCAAAAGCGTCATTGTCAAGACATTCAATTTGGTTTCTCTCCAAATTCA
ATAGTTTCAATTTGGATAAACCTTTGAAGACATTCTTTGAAATCCTTTTC
AGGGTATTTCCAGCTAAATCTAAGTTCAGAATTTCTTCCAGTCCTTCAAA
AATAGAGGGTGTTAAATGTCTAATCTTGTTATTGATAAATGTAATAATCT
TCAGTGCTGGGAACTTGTCTGATAAACCTGTCGGAAACAAAACAACTCGT
CCACCAAGTATCCTCAAATTCGTCAGAGActtcaactttttaaaacaatg
tACTTGCACGTATTCAAAATCCAGAAAGTCAACTTCCAATTGAATTGCAT
TCTCACTTATTTCTGCACCAATTCTTTCCCAATCTTTCCTTGTGACTTTG
CCAGGACATTGGACAAAAGTTCCACTAAGCTGGCAAGTACATTTCTTCGG
ACATTGAGAAACTTTCACTGGTGCTGTTAACACAACAGATACACAAACCA
ACAGCAATAATACTTTTATTAACCCACACATCATGCtgaacaaaaaattt
gttcTGCTTGTCTCTC Coding sequence (CDS) from alignment at sc0000097:544996..546061 >TCONS_00009674 ID=TCONS_00009674|Name=TCONS_00009674|organism=Clytia hemisphaerica|type=CDS|length=948bp|location=Sequence derived from alignment at sc0000097:544996..546061 (Clytia hemisphaerica)
TTATTCCACAATACGCCTGATCTGGAACGGGAGTACCGGTGTTGAACCAC
AAGTTCCGGTAACCCGAATACTTCCCATGCTGAAGTCTGTTGGATTGGAT
TGAGCATTGCATAATATGGGATTATGTGATAAATCAATCCCAAAACCAGG
GAAAGGTAACAAGTTATCAAAAGCTCCAGTTTCAATCTCAGATATATTGT
TATTACTGACATTGAATGCTGAGATTTTCAAGAAAGGTTGAAACAAGTTT
TTCTGTAATCTGGTGATTCTATTATTTGCGAACAATAGAAATAGAGGTGC
TTCTTTGAACGATTTGAAAAGTCCATCTGGTAGCATTGTCAATCGGTTAT
TGTTCAATGACAATAATCCTAAACCTGATAAACCATCAAAAGCGTCATTG
TCAAGACATTCAATTTGGTTTCTCTCCAAATTCAATAGTTTCAATTTGGA
TAAACCTTTGAAGACATTCTTTGAAATCCTTTTCAGGGTATTTCCAGCTA
AATCTAAGTTCAGAATTTCTTCCAGTCCTTCAAAAATAGAGGGTGTTAAA
TGTCTAATCTTGTTATTGATAAATGTAATAATCTTCAGTGCTGGGAACTT
GTCTGATAAACCTGTCGGAAACAAAACAACTCGTCCACCAAGTATCCTCA
AATTCGTCAGAGActtcaactttttaaaacaatgtACTTGCACGTATTCA
AAATCCAGAAAGTCAACTTCCAATTGAATTGCATTCTCACTTATTTCTGC
ACCAATTCTTTCCCAATCTTTCCTTGTGACTTTGCCAGGACATTGGACAA
AAGTTCCACTAAGCTGGCAAGTACATTTCTTCGGACATTGAGAAACTTTC
ACTGGTGCTGTTAACACAACAGATACACAAACCAACAGCAATAATACTTT
TATTAACCCACACATCATGCtgaacaaaaaatttgttcTGCTTGTCTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009674-exon-sc0000097-1491911889:544996..546061 | TCONS_00009674-exon-sc0000097-1491911889:544996..546061 | Clytia hemisphaerica | exon |
| TCONS_00009674-exon-sc0000097-1510915933:544996..546061 | TCONS_00009674-exon-sc0000097-1510915933:544996..546061 | Clytia hemisphaerica | exon |
| TCONS_00009674-exon-sc0000097-1575043694:544996..546061 | TCONS_00009674-exon-sc0000097-1575043694:544996..546061 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000097 | supercontig | sc0000097:544996..546061 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
Blast
The following BLAST results are available for this feature:
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