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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009617 ID=TCONS_00009617|Name=TCONS_00009617|organism=Clytia hemisphaerica|type=transcript|length=577bp
TAGTTAAGTTTCGTATTTAGAAAATTATTGCTGTGTGGATGCGTTGTGAA
CAAAACTGGGTATAGCGTTGCGGTTCTGTTTTTATCGTTGCTGGTATTTG
AACGGCGTTTTGGATAATTTATTCTTGGTAGAAAAAAAACACAGCTTTGC
ATAAAAGCAAAATCCAAGATGCCAAAATTTGGGGAGGTTCACCGCAAGCT
AACAGACGATAGATCTACCAAAGGGATGGATGAAACCGATTTCTCGGACA
TCTCTAAAGCCGCTATGAAGCCGTACAATCAAAACAAGCGCTCTGTACAA
TGGGTCAAATCAACCATCAAAGCTTACGAGGAGCCTGGCAAAGCATTCAA
AACCAACAGCTTCGGAGAATGTCACTTCTTAGGTGCTACAAGAAAAGCCA
AAGGAAAGTTTATCCGTATTGCGCATGACACATCCATGGAGGATACTTTC
AGTTTGCTTACTGAACATTGGAAGATTGACGAGCCACAATTGTTAATATC
TGTCACAGGAGGCGCCAAAAGCTTCAATATGGACCCAAGATTGAAACAGC
AGTTTGCATCTGGTTTAGTTAAGGTAT Run BLAST on NCBI protein sequence of TCONS_00009617-protein >TCONS_00009617-protein ID=TCONS_00009617-protein|Name=TCONS_00009617-protein|organism=Clytia hemisphaerica|type=polypeptide|length=136bp
MPKFGEVHRKLTDDRSTKGMDETDFSDISKAAMKPYNQNKRSVQWVKSTI
KAYEEPGKAFKTNSFGECHFLGATRKAKGKFIRIAHDTSMEDTFSLLTEH
WKIDEPQLLISVTGGAKSFNMDPRLKQQFASGLVKV Run BLAST on NCBI transcript from alignment at sc0000097:100582..113447- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009617 ID=TCONS_00009617|Name=TCONS_00009617|organism=Clytia hemisphaerica|type=transcript|length=12866bp|location=Sequence derived from alignment at sc0000097:100582..113447- (Clytia hemisphaerica)
TAGTTAAGTTTCGTATTTAGAAAATTATTGCTGTGTGGATGCGTTGTGAA
CAAAACTGGGTATAGCGTTGCGGTTCTGTTTTTATCGTTGCTGGTATTTG
AACGGCGTTTTGGATAATTTATTCTTGGTAGAAAAAAAACACAGCTTTGC
ATAAAAGTAAGAATAGTTCATATTTGTTGGGCACCAAAATCTTTCATCCG
ACACGCTAAAGCTCTGAGGTCGGGAAAATTTTAAACATCTGGAAAAGGTT
TAGATTACGGAATTTTGCAAAACTGCGTCAAGGATTTTGCAGTGGGAGGC
ATTTCTTAGAAAATTGTACAAAATGATAAAATTAAGAACATTTTGGGAAC
ATTTTTAGCCTTGAACTCAAAAAGTTTAGGACATCCGAAGGCTTCAAAAA
TATTGTAAGTTCTTATGAAAAAAAGAGAAATCGTGCCACTCGGAACCAAT
TATGCACATCCATAATTTTATTGAAAAGAGCATTTCCAAACAAAAATCCT
AATTGAAATTAAATTTGAATACGAAACCAAACGATCAATTAACACATGAC
TAACTTCCAGCAATCAAATTCTCAGAAGAAATTAACAAGTAGCCGTCCAA
TGCAGTTTAATTATACAAATTAGTCAGCACAAAATGATTGATCAGAAAAA
ACAATTTCTCCTTCCAAATAATCCAAATTATATGAGGAACACGTTTATAA
GAAACTCGAGGCTGAAAATGGTCCGAAAAATAAGGGATTGTTAAGGAACT
GCTCAGGCTCAGAATAAGAAATCAAGTTATAGAACAGCAAGATATAAATT
TGAACTCAGAAACTTTAATTAAAAAGATGATACAGTACTGTGTTTTTTAT
GTTCATCTAAAAATGATAAGATATTGCTGAAACGGCAATCAGTGTCAACA
GAGAAAATATACAGGAGTTTTACTTATCCATAAGTTACATACCCAGCTGG
CACAACACGTTGTTTCAACGTTCCTGTAACGTTATATGGACGTTGTGAAC
ATTAGATGGACGTTAAAACAACGTTGTGTGCCAGCTGGGATACTTAACAA
ATCCAAAAATTTTGGCCATAGACGGAAGCCTTATGTCTTTTTATTAACTG
GTTGAAGTAAAAGCCGGTCAATACAAGAAAATGCGCTATTTTGATTGGTT
CTCTAGCGGTCAATATAATACGGTAAAGACCACTTCAGTGCTTTGGTCAC
ACTGACGATGATTTTGAAAAAGGAAATTTGTTTTATAGAAAAGTTTCGCC
AGTTTGAACATGATTTAAAAAACTGACGTTGCAATGACTTCTCATAAGAA
AGTGACGTCAGAATAAATCAAAGAAAATATTGGGTAAAAAAGAAACGAAA
AANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCTTATCCTGCGCACAGAC
CTCGCAAGCTCGGTCTGTACTTCGGCTGCGGTCAATATTTTACCGTATTG
ACCTCCAAACCAGTTATTATTGTATTAATATAGTTTGTTCTTATAAAAAA
TTGTACCTAACAATTTTTAATCAACCGTCGAATAAAGCACCAAATAATTT
GATCTTTTTTGTTCATAGGCAAAATCCAAGATGCCAAAATTTGGGGAGGT
TCACCGCAAGCTAACAGAGTAAGTGAATTGTTTTTTAAGGATAATTTCTT
TCATAACATTTCTATCCCAAACTAAGGATGTTGTTCTGAATGTTTTACCT
AGTTGTTCTTTGACTCTTTTTTACCATACAACAGGGGGTGGTTTCACGGT
TGGCGGAGGATTAGAATCGGTTCTTTTTTTAACGGAGTGGCGGAATTTCA
ATAAAATTTCGACGGAACTTCGGAAATTGGGTCCTCTGACGGAGACGGAA
AATTGTACAAATTTACTGCGGAAAAACGGAATATAGCAAAAAGTTTTGTG
AATTTTCGGAAATGTCAAAAAATATTTGAAAATCGCGGAATTTTTGACAA
AAGCCTTGAATTTCAAAGAAATTTTCGGTGGCGGAATTTCGGTCCTTTTT
AGACGGTCTGACGGAAATCGGGGGAATAATTGGCGGAATACGGAATCGGG
TATACCCCCTGAAACCCCCCTCCACAATAGTCACAAATAATTATAGAGGT
TAAATCTTTACTCATCAGTAAGTTCGTTTTAAATATGTTTAGGTTTTTTA
AGGCTAACCAAAGAAATATAAGACTGGGTGAGGGGGTACCGCTGAAGTTC
GGGAAATTGACATTGTAAGTTTCCAACTTTCAGCAAACTACGGACCTTTT
CAGAAATTTGAAATTTTGGGGAAATAGTCAAAAAAACGACAAAAATGTCG
GAAATTTCGAAATTCAGACCCTCTAAGGGTCGATTTTCGAGCTTTGGCTC
GGACATAACCGTCATTTCGCAAACCTAGTATCCCCCGGGTCAAATGCGAA
AAAAAACAAATTCTACCCTGAAAAGTGCATGTCGAGTATGGCTGAAAGTC
GACTCTAATATTTATACTATCTGATATTTACAGACCCTAAATAAGGGACC
CTGGTCAGTGGCACGTTTTTTTCGTTTTTTCATAAATTTTGTCAACTCCA
TATTTTTGCAAGTGAAGCACATTCTTTCATGAAACCACAAAAATGTCTAC
TTTCAGCTTTCAATTGACCACCGTCTAATCAACTTTTGAAACTATAATAA
GGACAAGTTAAGAACATTTTAAGACTTTGTGGACTCAAAAACACGCTTTT
TCTTAGGAAAATAGCCAAAAATACTCAAAAATGGTATAAGGATATGTTAA
AAACATTATTTGGTTTAGAACTAAAAAAGTTAAGAACTTTCCAAGACTTT
AAAAATTTTGGATGTTCTTATAAAAAGAAACGTGTACTCCATAATGCCGT
CACTGTAACTAAGGGGTGTGAAATTGTTGTTTTAAACCTGCATCAAGCTT
TGAGTCCTTCATCACTTTTGAACAAAATTAAAACTTTATCCTGTGTCCTG
CTGGTCCTAGGGCTCGCAAAAGTGCACTTTTCTTGATATTTTGAAACGGG
AAGCAGGCCTAGAGATTGAGGAACTGGGTACTGCAATGGCTGATCGAGAG
CTGTGGATGGAGGGTTATTGTTTGTTTCCGAACTAGGTCCGAAGGTCGAA
GGATGATGATGATGATAAAAACTTTATCATTCCTTGTCTATAGTAACAGC
GAACTACTATTAGCGAACAAAGTCGCTAATGTCATTCTTCCTAATCAATA
AAAATTCCTTTAAGTCGTCGAAATGTTCTTTATTTGAGCTTGCTAAATAT
CTATAACATATCAAGTTTTCTGAGAATTCGGTCATTTTTGTCAAATATAT
TTAGATTTTAGTGTATTTTAACCGCGTTTTTCAGAATTCGAGAGTTCGGG
AGAGAATTTCTATTTTTAGTACTTCCACTTTCTTTCATTGAATATTTCGA
TTCTGGAGGGGTTCGGTGGCCTCCCACCTATACATTCCAAGCCTTATTAG
AGCAAATTTAAGCTTTTAAATCCTGAAAATCTTTCTTCTTTTTTCCCAGT
TGGGTGAAGGTTCATTGCAGTTTTCACTAAGAAGGATTTTAAGCCGAATT
TTCAAACGATCTCTGAATTTGTAACATGGGATATGATTTTTTTTAATAAA
GGGACTATAAATCCATTTTATTCTACTAACAGGTCTTTTCATTGCTGTTG
AACAGACTAAGCAGCACGCCTTAATGAACGTCTTTTTCTTACTTTGTTTA
CTCTCTGGATAAAAAATAAACAAATTTAATTTTTGTTTTGACGTTTTTCT
TTCTTCCCATTTGACAGTTCAGATTACACAGTTTCCTTTATAAGCAACAA
TGTATCTACTCGATAGATGTAGCAAAATTCCACTAGTATATACGTAGCCT
GGAGATCCATGCTATAATTTCTTATTCTATATACTGACGAAATATATAGC
ATGGTATGGGCTGAGAGCTTGGATTTCCCAGATCCTAATAACGGTTGAAA
ACATAGCCGATCAATTTTCAAAGGGAAAAGGAAAGACGACTTAGCTGTGA
TGCTTTACACCTTACATAAAGAGCAACAGAAAGTTTTCCAAGTCCAAAAT
ACAAGAATTGTACTATTCGGGTCTTTAATTTAGTCAACTACTTCATAAAC
TAGCTAACACCAGTTAAGGTTCTTATATCAAAAAGCTATGATCTTATCCG
TCAAGGTACACTTTAAGTTAATAGAGATGCTATAAAAGATAATATTATGG
TTAGTGGCCTTCATTGAGTGAAGTTAGATGAATTTTCTATGTCATATGTC
TGTGTCACATGTTTTTAATGGATTTAGTTTGCTATGTGTAGTGTTGGTAA
CAAGATGTGGGTTTAAACTCATTAAGCAGATTTGTCATTAAATTATAGCA
TCTTTTTCGATGTCATTCGCACGATAACTGCTTAAATATACTTTGCAAAA
TCGTTTGGCTGATCGAATTCTTTTTCTTTTAACAAGATTACCATTCTGGG
TTTGTTCTTGGTTGATGGATTTGATTCTGTTGGTCTCTTTGATAGCCCAT
TGTAGATGATTCTGACATCTTTAAGTTTTGAGGGGATATGGAGTTTCATT
GATTTATTTGGTGTATATTGCTAGATGGTATAAGTAAAGAGGTGTGGCAG
CGAAATCAAAATTTTGTGCCAACGTCAGATTGTATTCAGCTATTGTAGAA
ACAATATAGTTTAGGTTACGGATTTGTTAGAAAAAACTTAAAATCTATTT
TTCGCGTGATTCTTGTTTAAAATAATGATACACGTTTAAAGATGTTCGTT
TTTTTTATGATAGAAAGGAGGCGGGTCTCTTATGCTGACAATGAAGAATT
ATCAAGAATCTTTCAAAATTTGTACTCGCTCTGTGCGTTATATCTTTGAG
ATGAGTCATTCTTCACTCGATACAACCCAGCTAGTATGACAGGCCAGGAT
CGCTCACTATCTACTTCAGACTTGCGTGTTTGATTTCTTTCAGAAGCTAT
AAATCCCATTCTGAGAAGGTTAGGTATGGTTACGAATTCGAAAGTAGATA
GAATTTTGAGATAATGCGCCTGCGAATTAGCGAGAACCTCACCAAAAACC
GGGATTTTTTAGTGAGTTCCACTTTGGCAATTTTTGAAAAATAGAAGCCT
TTCAAGTGTTTTGACGCAAATTCGACTTTTTTTGATACTACCGAGTTTAT
GTATGTGTGTTTTTCAGCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGCACT
TTTACCGTCCTCGATTTTGCGGGGCGGAATTGCGGGTTTTTCCAAATCGC
TTCAGTCACTCTACCGTCCTCAAAAGTGCAAATACATAAACTCGGTACTG
TAAGAGCTTCGAAAGTTTAAAGTGACGTCAAAAAATTGAACACCTGTCTC
AAAGTGGAATAGACGTTACAGCGTAGAAAAAAAGCCGTGGCGTCTAGTAT
AGGCTACCCGCGAATTACTTAGGTTTGGTAAAACTTTTTATGACTAAAAG
AGTGACGTTACAACAGGCAAAACCCTTAACCCCCTAAACTTGTAATAAAT
TGACAATTTCTCAAAGTCGGTTCCGAAGATAAGCGAAGATATAATGATGA
ATACCATCGAATAGACCATAAAATTCGGAGCAAAATAATAGGCTACAACA
TACAAGTCATGTGTTCACCCAGCTGGCACACAACGTTGTTTCAACCAACG
TTTATTTAACGTTCACGACGTCCATATAACGTTAGACAAACGTTGAAACA
ACGTTGTGTGTCAGCTGGACAAGCACATAAATAAACATGGTCATTTGAAG
TTCGAAATTCTCCTGGGGGGGGGCACTCATATAATCCGACCTACGGCATG
TGCCGCCCTTTTCCACATTGTGTCGACATCTCAGTCTCATTTTCAGGTGG
CTTCAGCGAAATAAGATATGAAATCAAACTACACTTTAAGGGTCAGGAAA
GTTAGGTAAAATGCACTGTAAGGGTATCGTTTCACTACTCAAAGGTTGCA
TTGTAAATGGTCCGATTTTGAAAGCTATTTTTTTGGTGGCACATGCTGTC
GTTTAGAAATTGAATGGCCCTCCCCCCGGGAAATCTTTCAGGTAGATTTT
GCTCATTTTGATAAAGGTATTATAAGGCCTTCGTACCCTTTTTGAAAACC
TAGAGAAAAGTGAAAAATATAGCGATAATTTAGGCACCCTACACGGTTCA
TAGCATTTATCTACAAGATCTTCATTTTTTTCTTCCTCATTTTCATCTTC
ATTTTTAGAATGTTTTTAAATATTTTTTTATTTCAAATTGTTCCACTCAC
TAATATCTTTCCGATGATACCAAATTTATAAAGATTGAAGAATTCCTTCA
AAAGTTATAGGTAAAAGAAAAAAGAGTGCACACTTATCGTGAATAGACTT
TAGTTTAATGCACTCCACCATATATTGGGCATCTACAATCAGTGCCGAAA
TATATTGGCAATTTTGGGTATTTCAACGTTTTTCAGAATTAGAATACACG
GGTTTCGAATTAAATCTGGCGCGAGAGAAAAAATCAAGTAAATAAAATAG
ATTTCCTTTCTTCTCTTTTGAAAGCCAGGTGTTCATTCAAAAGATGTTTT
TCTATTTTAAATTCAATAAAAGAAATATGATTAAACGATTGACTTTTTAN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNCACGGCCAATTTTCGTTCTGTTTACTTGATAT
TTTTCGTGCAAATTTACATGGGATCAAAGCTAAAGCTAAGCAAAAATTTA
ATTCGAAACCCGTGTATTGCTCGGGCAAGAATTGCAATTTCAGTACTTCC
GCTTTGTTTCAGATGATTTTTCGATTTGGGTGGGGGGTTAAGTGGCTTCC
GGGCTATATTCTCAGCCTTATTGAAACATTTTTGAGCTTTTAGATCCTGA
GATCCTAAGTCGTTAAAAGGCGTTAAAACTCTAAGCTAAGACTCTATTTT
TTAACCGTACTTTAAAGCACTAATAACGATAATAATCACTTGCGGTTTTA
AAGTTTTGAGGGGATTCCCCTTTTGTGCCAAATATTTCGGGGCCGATTGT
AGCACCTGCTAAATTTTTCAACAACTGGAAGTTTTGACAACGAGATTTCG
CCTAACCATGCCACGGATTTTACAACGGGAGGTGTCTGATCCCCTGATCC
CATGCCCTCGTTATGGGGCCCTAACCTTTTTCAGTACGCACAGTTTAAAA
GGCATTACACGTTTTTTATAAGAATAAACTATATAAGAAACACAAGGCTT
TGATGGAAAAAATGCTAGGACCAACTTAAGAACATTTTAAGGCTTTGCGG
ACTCAAAAACACCCGATTTTTAAGGACAATGGGTAAAAATGCTCACAAAA
AGTTGAAAATAAGAACACTTTAAGAACATTGTTAGGCTTGAAACGAAAAA
AGTTATGATCATCCGAAGTTTTCAAAAATTTTGGATGTTCTTTTTGCCTG
GTGAAGGATGAAGATTCCTGTTAACATTTCCACCACGCTGTTTTTTTATG
TTTTCACACTGTTCCACGCAACATTTTTTGACAAAATGGACATGTTCGGT
TATTTTGTCATAACTCAAAAACTAGAAATCTTTTGATAAAAAATTAGCTA
TCCCTGAAAAGCTAATTATATTCTGCAGCTTTTAGGTTGGGTAACAATCC
AAATAAAATACTCTAACTAAAATGGTAGCTCCACATTTACCAAAGTTTTC
TTCCTCATTTTTCGGTAATGTCACTTTTTGGTATTTTTCACTTCATATGC
AAAGAAAAGTGGGGGAAGTTTAATTATTAAATCTTTTTTAAGTATTTTCA
ACGGAAAGCTTAGACTCTCTACTTTCTCTTTCTTTTTTTCTGAACGATTA
CCAAGCAAGCCAATAAAAGATATGGCTTGAGAAAGACGTGTCTATCAAAT
TGCGTTAATGTACGGCATTCGGAACGTATCAAAGACGCATATATACGGCA
TTCGTGCCGTGGTGTAAAGGTTAAGCAACCGGCTATGTCTTTAAGTAAGA
GAGTTCACATGTTTCATGAACCTTTTTTTCTTAGAAGGAGGAGCTATACG
AATTTCGTTGAAAGGAAATATTTCACATTACTCGCTTGATGACGTCATTA
CTAATCACTTCTGATAATTGTCAAACTGTCAATTTTGTAAAAAAAAATGA
ATAGCGCTTCGTCGTGCAAACGTCATGATTATTACTTTTCTCATTTGACC
GAAATTCAATCCCACAATCCTTTTCGTCTTAATTCAAAAGTCTTGAAAGT
TATCACTTGTTCTTTATTGTTCGTAATTGAATGTAATTTGCGTGCAAGCG
TAATAAACGCAAAGGCTGATGGGATTGAATTTCAGTCAAACTTAAAAATC
AATGTCTTTTTTTAAATTCGCGACGGTATGCTATTGGAAAAATTAAATAG
CTCAGCGGTGATGCAATGTCAATGTTTTTTCTAAATGAATACTTCTTAAG
CTACTTAAAAAAGACTCTGTTAGCATATATGGTTGAATTAAGCTTCTTCC
GAACCCTTTACCTGGAGGGGGTACTGACCTTGATGGCCGCCGGGAACGTG
CCGCTGGAGTTTTATTAGTGAACCCAGTCAGATAAATTTGGCAACCTGTT
AGAGCAATATCCAATTTTCACCCTGAAAAGTGTCATGAATGACCAAAAGT
AGCCGAGAAATTGAATCAGATACACATTTTGAAAATTAGTAAATTTGAGA
GCCGGTCAGATATCTTCTGTGCCTAAAAAGAACGACCCCGACCCCTAAAA
AGGACCCTCGACCCTATAAAGTGCCTAGACTATGCTATCGGTAGTAAACA
CAAGAATAAAGAAACACGGAATATACAACCCAAATGACACAGTTAGGACA
CTAAAACACCCGATTTCTTAGGAAAAATGGAAAAATAATACTAACAAAAT
GGTGGATATACACGCTTTTTTATAAGAATATACTTTTTAAAAATATTTAT
GATAAAATTGGTATAGAAATTAAGAATATGGTAAGAATACCACCATCATG
GAGTTTGGCAACTGAACCTAAAGATGCCGTTTTTAGACCATTTTACCATT
AAACTGCCAATCATTCCCAGCAAAATGCCGAATTGTTCCACGAAAATGCC
AAATTTTACCTTGCGGGTATACATTATATTTTGACTGGCTTTGGATTCAA
AGCTAAGAATACCGTGAAAATATTTAAGGATAATTTTTGATGAATTGAAA
GAAAACACCATTTTTACAAAAAAAAAAACGTGTAAGAACATGCTAAAACT
ATTTTTAGGCTTAAAACTCAAAAAGTTAAGAACATGATCCAAAGGTTTCA
AAAAGTTTTGGATATTCTTTAAAAAAAAACGTGTATTTCATGTAAGCTTT
CTTATAAAACGCATCATTTAATCTATTCCTGCTAAGCTTCTCCTTTAAAT
TTTGTCTCAGCTAAACAGTTGTAATCCATCTTGTAATCTATCCGATTCCG
TAAAGTTTTTTATCATTTTGATATCAAAATTGCCTGAAAAGATTGGATTT
TTAGTTTTTAGTAGCTCCTCAAATTTCATTTCATTTTCACGTCTATCAAG
AGCAGAAGTTTTAATTATTTCTAGTTCCTCAGGACGGCTTCATTTAGCCT
TGTAATTGGATTCCTGTCAAAGTCAGCAAATTATTTTTGAGTGGTTGCAC
ATATTTATTTAATGAGAGTTTTTTAAGGGTTATTTGCAGATTTGTATATA
TTTCAAGTTTTTTTTTTGGATTACACTGTATTGATTGTGCATAAAGATGG
CGGGTAGAGACAAAGTATTGGCGAAAAAAGTACAAATGATTCGAGCAGAG
TAAGGTTTTTAAATCTTCAGACACCTTTTCTATAAGGATGACTATTCCGG
CGGCCAATTTTTCACCGGCCGGATAACATTACCGCCGGCCGGACGACTAT
TCCGCCGACCGAGGAACTATTTCGACGGCCGAATTTCCGGCGAATTCTGA
CCCGGATCCACACTGATACTTTTCGACCGTAGTCGCGCGACCAGGTGCGT
GCCACTTATTTATTTAAGTATCCCCCTAAACTCGATCCAATCCTTTTTTG
ACACATTTTATTATTGTCTGTAGGTTCGAAAAAAGGACTGCGACGGGTTT
AGTGGGATAAAGCGGTCAACAAAAATGACCGCGCGGAAATTGCCGGCTAC
GGTCGAAAAGGTGCATTGCGATAGGCCTTTTTGTAAATCATTTGGCTGCC
TCGTTTCGAAACCATTACCAAGGTGATTGAATCCTCAAGTGTTACTTTTA
AATAGAGTAAACTTCTTATAAACTCCTCTGGGAATCGATTACTATAGCCA
TATTTTGAAAACGAGGTAAGCGTTACTGGTACGTCACCTTCCTTTGAAAT
CATTTGAGATCCGTTACAACTTTGACGTAACTTATTCTCTACCTGACACA
ACTTTGACGTCACTTATTCTCTACCTGACACAACTTTGACGTCACTTATT
CTCTACCTGACACAACTTTGACACAGATACGCGATTAAATGTAAAAATTA
CCGCTAGGTTTTTAAAAATGAACCACTCAAAAGCAAAGAAATCGCTGAAT
AGATTCAACCTTTAATAAAAAATACGGCGCACATTTTTAAGGCTTCATTT
TTTTGGCTGAGAAAGGTTAAAGATTCACTTCTAGCCCTTCGGGCTTATAT
TTCCTTGGCTGTCAATTACTATTTTTGCTAAACTTTTGCTGATTCGTGAA
ATTTTTCAAAATGTCGAATCTCGAAAACAAATTCAAAAATGTTTCCGATA
CTGATTAATTGGATTAAAGTTACCTGACCTTACTAGTAGACGTGCAGTAA
TTATGAATTCCTGGTTATATATAACACGAAGACTTTTTATCATAGCTTTT
TACCATTTGCCTTAAAGTGACTGAATTAACCGAAGGAATCTTTAGAAAGA
GCAGGAAAATACTTTCTAATAATAAAGACATTCTAATAATAAAGACATCC
ATTCATTTTTAATTTCCCAGCGATAGATCTACCAAAGGGATGGATGAAAC
CGATTTCTCGGACATCTCTAAAGCCGCTATGAAGCCGTACAATCAAAACA
AGCGCTCTGTACAATGGGTCAAATCAACCATCAAAGCTTACGAGGAGCCT
GGCAAAGCATTCAAAACCAACAGCTTCGGAGAATGTCACTTCTTAGGTGC
TACAAGAAAAGCCAAAGGAAAGGTAACTGATATTACTGCAAGAATAAGTA
TACCAGGATAATCGCAACGACGGATGAAAATTATAATTAGCTAGTCAAAA
TACAAGCTTTGATTGGGTGAAGCTCACTAGCCTGTTGCCGTGATTGTACC
GATTTACTTAACCTAACTATTGTTATGATATCTTACCAACTTTTTCTTTT
CGAGTAGCAAAGCGATGGCATTTTATTACTGCCTTTTTTGTCTCAGCTAC
AGATTATATTGAGACAGACTTGAATACTATTACAGTTGATGCTCTCTAAT
TCGACGTTCTACTATTCGATACGCTCCCTTATTCGATGAAATTTAAAGTC
CCCGTCAACAAGAAACTCTCATTAACGACGCTCCCTTACTCGATAAGATC
TCTTTTTCGATGAAAATCCAATTCCCCTTGAAGATCGAATTAGAGAGCGT
CAACTGTAGTTACATGGTCTCTTCTTTTCTCGGCTAGCCTCGCCACCAAT
ACGGTTTTTACTGACCCTGTGTATATCCCCTATCCCACCTCGAGACGACC
GTGCAACGGATTTATCCCGTTGAAGTCCCTTTGCATGATTTCAAAAAGCA
CGAACAAAAAGCAGCTACTTACTACTTACTACAATAAAGAGCAAACTGTA
AAAGCGGGATATGCGAAAGTGACATTTTATAGCATCACAATTGAAAGTTT
TGCTTATAATCCATATCAACCCAAGAATAAACAAAATCAAAATATATCCC
AGCTCCACGTGATGTCTTTTGACCAATGGAATCGCGAGAATCTAGAAAGG
TCTTCAAAACACTTTACGATATTTGATGTTTTCTTTCCACCGTACAGTTT
ATCCGTATTGCGCATGACACATCCATGGAGGATACTTTCAGTTTGCTTAC
TGAACATTGGAAGATTGACGAGCCACAATTGTTAATATCTGTCACAGGAG
GCGCCAAAAGCTTCAATATGGACCCAAGATTGAAACAGCAGTTTGCATCT
GGTTTAGTTAAGGTAT Coding sequence (CDS) from alignment at sc0000097:100582..113447- >TCONS_00009617 ID=TCONS_00009617|Name=TCONS_00009617|organism=Clytia hemisphaerica|type=CDS|length=1224bp|location=Sequence derived from alignment at sc0000097:100582..113447- (Clytia hemisphaerica)
TTTATCCGTATTGCGCATGACACATCCATGGAGGATACTTTCAGTTTGCT
TACTGAACATTGGAAGATTGACGAGCCACAATTGTTAATATCTGTCACAG
GAGGCGCCAAAAGCTTCAATATGGACCCAAGATTGAAACAGCAGTTTGCA
TCTGGTTTAGTTAAGGTACGATAGATCTACCAAAGGGATGGATGAAACCG
ATTTCTCGGACATCTCTAAAGCCGCTATGAAGCCGTACAATCAAAACAAG
CGCTCTGTACAATGGGTCAAATCAACCATCAAAGCTTACGAGGAGCCTGG
CAAAGCATTCAAAACCAACAGCTTCGGAGAATGTCACTTCTTAGGTGCTA
CAAGAAAAGCCAAAGGAAAGATGCCAAAATTTGGGGAGGTTCACCGCAAG
CTAACAGATTTATCCGTATTGCGCATGACACATCCATGGAGGATACTTTC
AGTTTGCTTACTGAACATTGGAAGATTGACGAGCCACAATTGTTAATATC
TGTCACAGGAGGCGCCAAAAGCTTCAATATGGACCCAAGATTGAAACAGC
AGTTTGCATCTGGTTTAGTTAAGGTACGATAGATCTACCAAAGGGATGGA
TGAAACCGATTTCTCGGACATCTCTAAAGCCGCTATGAAGCCGTACAATC
AAAACAAGCGCTCTGTACAATGGGTCAAATCAACCATCAAAGCTTACGAG
GAGCCTGGCAAAGCATTCAAAACCAACAGCTTCGGAGAATGTCACTTCTT
AGGTGCTACAAGAAAAGCCAAAGGAAAGATGCCAAAATTTGGGGAGGTTC
ACCGCAAGCTAACAGATTTATCCGTATTGCGCATGACACATCCATGGAGG
ATACTTTCAGTTTGCTTACTGAACATTGGAAGATTGACGAGCCACAATTG
TTAATATCTGTCACAGGAGGCGCCAAAAGCTTCAATATGGACCCAAGATT
GAAACAGCAGTTTGCATCTGGTTTAGTTAAGGTACGATAGATCTACCAAA
GGGATGGATGAAACCGATTTCTCGGACATCTCTAAAGCCGCTATGAAGCC
GTACAATCAAAACAAGCGCTCTGTACAATGGGTCAAATCAACCATCAAAG
CTTACGAGGAGCCTGGCAAAGCATTCAAAACCAACAGCTTCGGAGAATGT
CACTTCTTAGGTGCTACAAGAAAAGCCAAAGGAAAGATGCCAAAATTTGG
GGAGGTTCACCGCAAGCTAACAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009617-exon-sc0000097-1575043694:113292..113447 | TCONS_00009617-exon-sc0000097-1575043694:113292..113447 | Clytia hemisphaerica | exon |
| TCONS_00009617-exon-sc0000097-1575043694:111630..111679 | TCONS_00009617-exon-sc0000097-1575043694:111630..111679 | Clytia hemisphaerica | exon |
| TCONS_00009617-exon-sc0000097-1575043694:101576..101777 | TCONS_00009617-exon-sc0000097-1575043694:101576..101777 | Clytia hemisphaerica | exon |
| TCONS_00009617-exon-sc0000097-1575043694:100582..100750 | TCONS_00009617-exon-sc0000097-1575043694:100582..100750 | Clytia hemisphaerica | exon |
| TCONS_00009617-exon-sc0000097-1510915933:113292..113447 | TCONS_00009617-exon-sc0000097-1510915933:113292..113447 | Clytia hemisphaerica | exon |
| TCONS_00009617-exon-sc0000097-1510915933:111630..111679 | TCONS_00009617-exon-sc0000097-1510915933:111630..111679 | Clytia hemisphaerica | exon |
| TCONS_00009617-exon-sc0000097-1510915933:101576..101777 | TCONS_00009617-exon-sc0000097-1510915933:101576..101777 | Clytia hemisphaerica | exon |
| TCONS_00009617-exon-sc0000097-1510915933:100582..100750 | TCONS_00009617-exon-sc0000097-1510915933:100582..100750 | Clytia hemisphaerica | exon |
| TCONS_00009617-exon-sc0000097-1491911889:113292..113447 | TCONS_00009617-exon-sc0000097-1491911889:113292..113447 | Clytia hemisphaerica | exon |
| TCONS_00009617-exon-sc0000097-1491911889:111630..111679 | TCONS_00009617-exon-sc0000097-1491911889:111630..111679 | Clytia hemisphaerica | exon |
| TCONS_00009617-exon-sc0000097-1491911889:101576..101777 | TCONS_00009617-exon-sc0000097-1491911889:101576..101777 | Clytia hemisphaerica | exon |
| TCONS_00009617-exon-sc0000097-1491911889:100582..100750 | TCONS_00009617-exon-sc0000097-1491911889:100582..100750 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000097 | supercontig | sc0000097:100582..113447 - |
Blast
BLAST of TCONS_00009617 vs. Swiss-Prot (Human)
Match: TRPM2 (Transient receptor potential cation channel subfamily M member 2 OS=Homo sapiens GN=TRPM2 PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 9.745e-19 Identity = 40/75 (53.33%), Postives = 54/75 (72.00%), Query Frame = 1
Query: 352 TNSFGECHFLGATRKAKGKFIRIAHDTSMEDTFSLLTEHWKIDEPQLLISVTGGAKSFNMDPRLKQQFASGLVKV 576
T++FG+ F G ++K K K++R++ DT + L+T+HW +D P LLISVTGGAK+FNM PRLK F GLVKV
Sbjct: 124 TDAFGDIVFTGLSQKVK-KYVRVSQDTPSSVIYHLMTQHWGLDVPNLLISVTGGAKNFNMKPRLKSIFRRGLVKV 197
The following BLAST results are available for this feature:
|
