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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009540 ID=TCONS_00009540|Name=TCONS_00009540|organism=Clytia hemisphaerica|type=transcript|length=2549bp CtgcaatttctttatttttttgcacatttAGCCAAcccttaaaattttcc tttgagaaGATCTTGTCCTGCACTTTGTAAACatatttgttatattttat aCAATATTATATACACTTGAGCTTATTACACCTTCAACTAAAAATAACAA ATACATGATGAACCTGGGTGtgctttttttgttaattttgagcCAAAAGT GTTCTTATTGGTGTTCTTGAAGTTAATAATTGGGTTAAAAAAATTAGCGC TCTAGACTCTAATTTAAAGTTGAGAAGTAAAATAGTTACTGCAATTGCGA AAGTTTCTTGTGAACTCAGATAATTCTGAGCAAATTATGGCTCATCTATT CAATTCATATTCTGgccatgttcttacgatgttcttattttccctcaAAT TTCAGCCTCTAAATGTTCATATACAAcgtgtttcaaataaaaaaaagtga attcaaaacaaaagacaaattaaaataaataacTCTTTATAAACTTAATA ACCAACTCATTAGGCAACTTGTTACCGAGTGTCTTACAACTTTACAACCA TCAGCTCTCAATGTACATAGTCTCATGGTCCTTTTATACAGCAAATAACA TGCTAAATATTCATTTCTGGAATTAAAACAATTTTCCAATCTATAAGTAT CCTTTATTAACCCTTTCCTCTATGAAAGTCATAGACACTTTATTAAACGT TGGGAGGAGCAGGGTTTTGCCTCTTACCTTCATCAACCTCACTATTTGCA ACAGAAATAACAGCATAGATAAATGATTGACGatacaacaaaaataaaag ctGGAGCAGCTGATAAGATAGCTATAGACTTATCCAAATCGGTTAGGCAC TCTTTATGCCAAGGCGTTTGTATGAGTTTACCATCTTCCTTGGCAAAACA TTCGCGTACTAATTCGTTGCTGCTGTGTTGTTTGATGTTAGCGATGACTC GTAGTAAAGAAGCTAATGTGAAAAGGGCCAATGATAAATAGAGAAATCCT TTGTATACGGATAGGCAATGAGGCATTTTACATTTAGATTTATTGATTTG GGTAGGTGGGATTTCGGTGTTTTCTTGCGGCTCGGAACCTGTTGTGGCTG AAGTTGAGGGAGATTCAGTGGTTTGGGTAGGTGGGATTTCGGTTTTTTGT TGCGGCTCGGAACCTGTCGTGGCTGAAGTTGAAAGAGATTTAGTGGTTTG GGTAGGTGGGATTTCGGTGTTTCGCTGCGGTTTATCTTGGAGTAATTTCC CAGATTTCCCAGTTTCTTCTTGTAATTCGCCGGCTTCAgtgtcttcattt ttcttttcctgtGTTGATACATTGGTGTGGATATGGGAAATCACTTCTGC AAATCCGGAGATACAGACCAAGAATGCAAAGACACATTGAACGATGTCTT TACCAAACAACCACCATTTGTATTCAccaacaaaataattttccatgTAG AAGTATTGAAGAATCAATTCAGCACCATTATCAGAGAAAATAATAACAAG AGCtagaaaaagctgaaaattcgAGTACTCCTTGATCACTTCGTCTCGCT GCTTTCTCTTTACTTTTATGACTGGACTGTATACGATTGATGGATTTTCT TGACTTGGTCCAGGCATTGTGTCATCTTGTGGAGTTTCCCCTGTGTCGGT CAGTCGACTTGGTACTGGCTTTGCGTCATCTTGCGGAGTTTCCACGTTTT CAATGGTTCTGGCGTATCGTTCATCGCGACCAGTAAATTTCCAGGTGCGA TAGAAGGAACAAATGGCAATCATCTTGCAGATATATCCGACTATACCGAA TGCAAAAGCAGATTTTGTTACGTGACTGTTACGGTGAAGTGATTGATGTG ATCCTTCTAAATGAACAAGATCTCCAAATTCATATGTATAAAAGGCGTAA AAATCACCAATCATATCAATTAAAAACCACCAATAAGTAACAATCCCAAG AATGTAACCaacaaaatgtttcatttcaacACAATTATAGTTTCCACATT TAGTACTGCAACATAAAGAATTGTTTGAGCAACAGTCCTTGCACCAGTTA AGACAAGAATCGCAACGTTTATCACAATTAAGACAACAACCACAGCAACA ACAGCAACAGTCTCCATCATCACAACATTCACAACATCTTTCTTTATCAT CGTTACAGTTGTGAGTGGTATTCAGATAAACTTCAATAAGTTTTCGATTG TAGTTGAAGAAAAACACAACAAGGCTTATAATGAAAGCAATGAATGGAAT TGCGATGATAACACCAAGCCAAGCCTTTTTATTCATATCGGACTCCCATA GCTGGTCAACACCACACCAATATTTGCAACCCTTCGTTATAGGTAATTTG ATACAAGTTTTCGAACACGGGATGCTCAGCTCTCCTggtttcatttttga taccaaTTTTTTCTTCGTGTCTCCTCTACTGAGAGATGTTCACAACTACA CGAAGATCGCGTGCAAAGCCAAAGAAAAATATCATGAGATAAAATATCTT CCCGTCCTCTCTTCTtcataaaaagaagaaaagatcaAAGGCCCCACAT Run BLAST on NCBI transcript from alignment at sc0000095:637740..640288- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009540 ID=TCONS_00009540|Name=TCONS_00009540|organism=Clytia hemisphaerica|type=transcript|length=2549bp|location=Sequence derived from alignment at sc0000095:637740..640288- (Clytia hemisphaerica) CTGCAATTTCTTTATTTTTTTGCACATTTAGCCAACCCTTAAAATTTTCC
TTTGAGAAGATCTTGTCCTGCACTTTGTAAACATATTTGTTATATTTTAT
ACAATATTATATACACTTGAGCTTATTACACCTTCAACTAAAAATAACAA
ATACATGATGAACCTGGGTGTGCTTTTTTTGTTAATTTTGAGCCAAAAGT
GTTCTTATTGGTGTTCTTGAAGTTAATAATTGGGTTAAAAAAATTAGCGC
TCTAGACTCTAATTTAAAGTTGAGAAGTAAAATAGTTACTGCAATTGCGA
AAGTTTCTTGTGAACTCAGATAATTCTGAGCAAATTATGGCTCATCTATT
CAATTCATATTCTGGCCATGTTCTTACGATGTTCTTATTTTCCCTCAAAT
TTCAGCCTCTAAATGTTCATATACAACGTGTTTCAAATAAAAAAAAGTGA
ATTCAAAACAAAAGACAAATTAAAATAAATAACTCTTTATAAACTTAATA
ACCAACTCATTAGGCAACTTGTTACCGAGTGTCTTACAACTTTACAACCA
TCAGCTCTCAATGTACATAGTCTCATGGTCCTTTTATACAGCAAATAACA
TGCTAAATATTCATTTCTGGAATTAAAACAATTTTCCAATCTATAAGTAT
CCTTTATTAACCCTTTCCTCTATGAAAGTCATAGACACTTTATTAAACGT
TGGGAGGAGCAGGGTTTTGCCTCTTACCTTCATCAACCTCACTATTTGCA
ACAGAAATAACAGCATAGATAAATGATTGACGATACAACAAAAATAAAAG
CTGGAGCAGCTGATAAGATAGCTATAGACTTATCCAAATCGGTTAGGCAC
TCTTTATGCCAAGGCGTTTGTATGAGTTTACCATCTTCCTTGGCAAAACA
TTCGCGTACTAATTCGTTGCTGCTGTGTTGTTTGATGTTAGCGATGACTC
GTAGTAAAGAAGCTAATGTGAAAAGGGCCAATGATAAATAGAGAAATCCT
TTGTATACGGATAGGCAATGAGGCATTTTACATTTAGATTTATTGATTTG
GGTAGGTGGGATTTCGGTGTTTTCTTGCGGCTCGGAACCTGTTGTGGCTG
AAGTTGAGGGAGATTCAGTGGTTTGGGTAGGTGGGATTTCGGTTTTTTGT
TGCGGCTCGGAACCTGTCGTGGCTGAAGTTGAAAGAGATTTAGTGGTTTG
GGTAGGTGGGATTTCGGTGTTTCGCTGCGGTTTATCTTGGAGTAATTTCC
CAGATTTCCCAGTTTCTTCTTGTAATTCGCCGGCTTCAGTGTCTTCATTT
TTCTTTTCCTGTGTTGATACATTGGTGTGGATATGGGAAATCACTTCTGC
AAATCCGGAGATACAGACCAAGAATGCAAAGACACATTGAACGATGTCTT
TACCAAACAACCACCATTTGTATTCACCAACAAAATAATTTTCCATGTAG
AAGTATTGAAGAATCAATTCAGCACCATTATCAGAGAAAATAATAACAAG
AGCTAGAAAAAGCTGAAAATTCGAGTACTCCTTGATCACTTCGTCTCGCT
GCTTTCTCTTTACTTTTATGACTGGACTGTATACGATTGATGGATTTTCT
TGACTTGGTCCAGGCATTGTGTCATCTTGTGGAGTTTCCCCTGTGTCGGT
CAGTCGACTTGGTACTGGCTTTGCGTCATCTTGCGGAGTTTCCACGTTTT
CAATGGTTCTGGCGTATCGTTCATCGCGACCAGTAAATTTCCAGGTGCGA
TAGAAGGAACAAATGGCAATCATCTTGCAGATATATCCGACTATACCGAA
TGCAAAAGCAGATTTTGTTACGTGACTGTTACGGTGAAGTGATTGATGTG
ATCCTTCTAAATGAACAAGATCTCCAAATTCATATGTATAAAAGGCGTAA
AAATCACCAATCATATCAATTAAAAACCACCAATAAGTAACAATCCCAAG
AATGTAACCAACAAAATGTTTCATTTCAACACAATTATAGTTTCCACATT
TAGTACTGCAACATAAAGAATTGTTTGAGCAACAGTCCTTGCACCAGTTA
AGACAAGAATCGCAACGTTTATCACAATTAAGACAACAACCACAGCAACA
ACAGCAACAGTCTCCATCATCACAACATTCACAACATCTTTCTTTATCAT
CGTTACAGTTGTGAGTGGTATTCAGATAAACTTCAATAAGTTTTCGATTG
TAGTTGAAGAAAAACACAACAAGGCTTATAATGAAAGCAATGAATGGAAT
TGCGATGATAACACCAAGCCAAGCCTTTTTATTCATATCGGACTCCCATA
GCTGGTCAACACCACACCAATATTTGCAACCCTTCGTTATAGGTAATTTG
ATACAAGTTTTCGAACACGGGATGCTCAGCTCTCCTGGTTTCATTTTTGA
TACCAATTTTTTCTTCGTGTCTCCTCTACTGAGAGATGTTCACAACTACA
CGAAGATCGCGTGCAAAGCCAAAGAAAAATATCATGAGATAAAATATCTT
CCCGTCCTCTCTTCTTCATAAAAAGAAGAAAAGATCAAAGGCCCCACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00009540-exon-sc0000095-1575043694:637740..640288 | TCONS_00009540-exon-sc0000095-1575043694:637740..640288 | Clytia hemisphaerica | exon |
TCONS_00009540-exon-sc0000095-1510915933:637740..640288 | TCONS_00009540-exon-sc0000095-1510915933:637740..640288 | Clytia hemisphaerica | exon |
TCONS_00009540-exon-sc0000095-1491911889:637740..640288 | TCONS_00009540-exon-sc0000095-1491911889:637740..640288 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000095 | supercontig | sc0000095:637740..640288 - |
Blast
The following BLAST results are available for this feature:
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