TCONS_00009409 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009409
Unique NameTCONS_00009409
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2628

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009409 ID=TCONS_00009409|Name=TCONS_00009409|organism=Clytia hemisphaerica|type=transcript|length=2628bp
AAACAATCGTCAAACTTTGATGTAAGAAGCGTAAGGATGTAATGTAAGCT
TGATCTTTTTTCCTAAAAGCAGAACTCtctgacaattttttttggattca
aaTGTCAACTTCTATATTGGTTGGTAGAATATACCAAAGTATAGTTACTT
TTGATTGATTGGCTGAAATGCTATTACAGATTTATTGTTAATGATTGCGC
TTTACTTATTAAATTCGCAAAGAAGATcaattgaaaaatcaatatgtCGA
AACTACCATACGAAGAGTTTTACGACGAGGAGATGAACACAGAAATTCAT
ATTGACGGAGATGGTGTATCATCAGATAGACATGATCCAATACTGAAGAT
GAGAGATTATCTGGACAGCAAACCTGGATATGCCGTTCTAACTAGCATTt
ttttcctGACCGCTGGTTGGGTCATATTAGTCACGTGGTCACAGAACAAA
GAAAATCATTGGCAAGCAGAAAAAATAAGTGGTATCACATCTTTCTTTTT
ATTCGCAACCATTACACCTTGGGCTATGATgctgtttttgatgacgttAA
TGGCATTaagaaggaaaaagaaaatcaatgttTGGTTTTGTATTATTGGC
TATTTCAGTGTTTTCTGGTCAATCATCGTTATATGTGCTTCGTCCGTATT
ATATCATAATGCAACTTTGGTATTATGTCAACGATATAGATGTAATGTCC
TCAAATATGTGGCAgCAAGTCTTGGTATAATTGGTGGTCTATCACTTGCA
GTTCAGGCGTATCTTCACTTAAGAGTACTAAAGAAAAATCGCTGTTGTAA
AGAAAGCGCTCCATATAGCAAAATGACTAAAGGAAGAGGGATTTGAAGCT
GAAGAAATCTCCAAACCCCAAAGCAAAAAAGTATTGATGTTTCCATAGCT
GGTACCAAAACAGCAATACAACGTCCATTTATCGTTCATAACATCCATCT
CGCACCCGTTATAGctagtttatgtattcgagatgtatcgaaggagacgg
tataccttatcggggaaaacttcgtcggggaaaattttcgtcgggaaaaa
ttcgttacttgctggtagttggtaaacgcattaagggcGGGGGAAATTAT
CGttggggaaaatattcgtcacttgtccaaaatttcgtcacttttccccg
acaaagttttccccgataaggtattttccccgataaggtatggcATAGTT
GGCATGTTCCCAAAATAGCTGGacaaaggtaaaaaaaaaaagactacGTC
TggttaggtgagcaaaggcgatatgaGCCGTActtcaactatcgactttg
ttttatGTTAACTTCACTTACCGTTTCCCTCGATCTCCTCCAATACATAC
ACTTGCTAATATGGACATGGTGGTGTTAGAAATGTTGTCAACCGTAAAGT
AAAGAAACTGCACAACTATATAATTAAATGCATCCATAAACCCTTAACGA
CGCGATTTTCTTTTAAGGGGTCTTGTAaagtggcgtggtggcagggtGCA
GGTGGGcaaatgccccccccccagagACCGGCCCTAAAGGTTGATAGGTT
GTATAGGGCTATGGCCCGAACGTACCTGGTGAAAAAACATACATCTTTGT
TTGGACGTGACGTTAGAATATTTAGGTATTtataataaaattgaaaatat
ttagttTTTATACTTATAGTGGAAAACATTATTAGGTTTTCATCTTAGAA
AACCAAAGTCATTGTACATAAATATTACAATTGATGATCTGACTTACCTT
AAGAAGCACTTCCAggaaatgttcgtacatgggggtggaggatatatagt
ctggggggggggtagtgaaaaatctaaatttgcCTTGTCTAGGAGAAAAA
TCTGCTCTGATTAtgggtgattttgaatgtccgggggtcaattgatgctt
gtccagggggctGAGAATTATACTGCCCGttgggtcaaaagtcacaatct
TCGGCgtgtaaaattcaaaaaatgttatatcctcctgCTCCcaatattca
aatattttctagAAGAGTCCATTGTTCCATAACTTTATATTCAAAGTCTC
TTTCTCTAGAGCTTCTCCGATATTGTAATAGGTGTAATCCTTTGTTGTTA
TTATGAATCCATTACCAAAACCAAAGTTATCAAAATCCCATTACTTTAAT
CCTATCGTTTCGAAAATCTCTAGAAAGCTTCATATATAACACACTGGAGT
AAGTGATTCGTCGGAGAAAGAAATGATATTCAACTTCGATGTTtataaat
gtgaaaaaagaaaTACATGAATGCTTGGACAACCAAACCAATAGTACAAA
GGAAACCAAATGCCTAAAAGGTGGGAAAACATTTCTTATTAATGAACTAT
CGTGAAGTTGGGTaacatcagtggaggctaacatgcatagccctcaaatg
aatgacctggctggtccttaaaatacaaagttaaatcaaaacaaaaatgg
tagagtagagctgcgagcggagctgcgtagttcatttgttttgaaatttt
gctcctttgattggtcattcatttgagggctgtgcatgttagcctccact
gatgcaagttacccgatctcacggtatcaaaataaaaaacaaaattaggT
GTTAGAAAAAAGTCAGCATCACAATCCT
Run BLAST on NCBI

protein sequence of TCONS_00009409-protein

>TCONS_00009409-protein ID=TCONS_00009409-protein|Name=TCONS_00009409-protein|organism=Clytia hemisphaerica|type=polypeptide|length=200bp
MSKLPYEEFYDEEMNTEIHIDGDGVSSDRHDPILKMRDYLDSKPGYAVLT
SIFFLTAGWVILVTWSQNKENHWQAEKISGITSFFLFATITPWAMMLFLM
TLMALRRKKKINVWFCIIGYFSVFWSIIVICASSVLYHNATLVLCQRYRC
NVLKYVAASLGIIGGLSLAVQAYLHLRVLKKNRCCKESAPYSKMTKGRGI
Run BLAST on NCBI

transcript from alignment at sc0000093:431201..441299-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009409 ID=TCONS_00009409|Name=TCONS_00009409|organism=Clytia hemisphaerica|type=transcript|length=10099bp|location=Sequence derived from alignment at sc0000093:431201..441299- (Clytia hemisphaerica)
AAACAATCGTCAAACTTTGATGTAAGAAGCGTAAGGATGTAATGTAAGCT TGATCTTTTTTCCTAAAAGCAGAACTCTCTGACAATTTTTTTTGGATTCA AATGTCAACTTCTATATTGGTTGGTAGAATATACCAAAGTATAGTTACTT TTGATTGATTGGCTGAAATGCTATTACAGATTTATTGTTAATGATTGCGC TTTACTTATTAAATTCGCAAAGAAGATCAATTGAAAAATCAATATGTCGA AACTACCATACGAAGGTAAGGACAATTCCAATTTTACAAAACTTTACATA AAAAAATCTAGCGTTCGTAGCTTCCTTACAATCATCTTATCAGAAAAGAA CCCGGGTAGGTAGAGACGTGCCCGTTTTCTTTATAAGAACATCCAAAATT TTTGAACGCTTTGGAAGTTCTTAACTATTTTGAGATTCATGCCTAAAAAT GTTCTTAACATGTTCTTATTTTCATCATTTTGTGAGTATCTTTGTCCATT TTCCTAAGAAATTGAATGTTACAGAGCCCGCAAAGCCTTAAAACATTCTG ATTGTTCTGAACATTTTGGCCATCGAAGCATTATGTTTTGATATAGTCTG TTCTTATAAAACGTGTATATGCGTATGCTCCCGTGAGTATCACTATGTAT GGCTAATACACGGTGACCATAGTCTTTTTAAGAATACCGTGGCTTTCTTA TATTATGCTGTGACGACAGAAAGCTATTCTATTCAACGCGTATCTAGGGA AAACGAAAATAACTTGGGCAATCACCCAGGGTCGTGAATCGAAAATTTCC GACCCCCTCGGAATTCCGGACCAAAAATTCCCTTACCCCTATGGAATTCC GGGTCTAAATTTCGGTTACCCCTATGGAAATTCATACCATATTCCGACCC CGAAATTCAAGTAACCCCTATGGAATTCCTGCCAAGAATTTCGGGTTACC CCTATGGAATTCCAACCCAGAATTTCGAGTCACCTTCTATGGAATTCCTG CCCAGAATTTCGGGTTACCCCTATGGAATTCCGACCCAGAATTTCAAGTC ACCCCCTATGGAATTCCTGCCCAGAATTTCGGGTTACCCCTATGGAATTC CGACCCAGAATTTCAAGTCACCCCTATGNGGGGGGGGGGGCTCAATAAAG GCTACCGTAAATACCTTTGCATAAATTGTTGTCCTGTTGATTACAGAAAA AGGTGACTGATCAATCAGGAAGAATCAAATGTTGTACACACAGTTACAAA GAAATATCAGCGTGTAAAGGAGAGTTTGGATATAACTATGCTAAGTGAGT GAATGTAGTGAGATTACTTTAATAGACTCCTGCCCTCCCCAGTCGAATAT ATTAGCACACCAATCGTCTTTGGCGAGAAAAAAATTCTAAAATTTTATTT CTTTTCCAAAATATAAACGTTCATTGAATTCGTGTACCTTATTACACAAA TATTACTAGGCAAGTAATCAACGGCCTTGAAATTGATACACAAAGTAATA TTCGTGTAATAAGGTAATGCAAAACAGGGGAAACTACCTGTTACGAATTT TTGGTAACACATCAATAAATGACACAACCATGTTTAATCACTTTCGGTAA AAGTGGTATCAAATTTCTTAGAAAGACTTGTGATAAATACTTGTAAACTA TACGTTTTTATACCCATATAAGAACATAATGCTTCAATGGCCAGAATAGC CAAAAGCTAAGAACATCTTTAGGCTTTGCAGACTCGAAAACACCCTTATT CTTAGAAAACTGGACAAAAATACTCACAAAATGGTGAAAATAAAAACATG ATGAGATTTTTTTAGGCTTAAAACTCAAAAAGTTAAAAACATCCGAAGGC TTCAAAAAATTTTAATATTCTTATAAAAAACATCATAAATACTTGCAAAT AATGCACTTACTAATAAGCTGACATATAAATGCTGATAAGAAAGAAATCC GTACTTAGCTAAGAAATTACTTTTTGTACGCATTCAAACAATCGTCAAAC TTTGATGTAAGAAGCGTAAGGATGTAATGTAAGCTTGATCTTTTTTCCTA AAAGCAGAACTCTCTGACAATTTTTTTTGGATTCAAATGTCAACTTCTAT ATTGGTTGGTAGAATATACCAAAGTATAGTTACTTTTGATTGATTGGCTG AAATGCTATTACAGATTTATTGTTAATGATTGCGCTTTACTTATTAAATT CGCAAAGAAGATCAATTGAAAAATCAATATGTCGAAACTACCATACGAAG GTAAGGACAATTCCAATTTTACAAAACTTTACATAAAAAAATCTAGCGTT CGTAGCTTCCTTACAATCATCTTATCAGAAAAGAAGCCGGGTAGGTAGAG ACGTACCCGTTTTCTTTATAAGAACATCCAAAATTTTTGAACACTTCGGA AGTTCTTAACTATTTTGAGTTTTAAGCCTTAAAATGTTCTTAACATGTTC TTATTTTCATCATTTTGTGAGTATCTTTGTCCATTTTTCTAAGAAATTGA ATGTTACAGAGCCCGCAAAGCCTATAAAACATTCTTAGATTGTTCTGAAC ATTTTGGCCATCGAAGAATTTATGCTTTTATATAGTCTGTTATTATAAAA AAACGTGTATACGCGTTTCCAAATCAATTTTGCTCCATCGTCCCAGGGAC AAAATCAACTTGTCTTTAGGGTATTTCCCTCACTTTTTTGTCCCATGAAG CAAAAAAAGAAACCATGGGACACGCACTTTTTTCTTGTGTTGGTGGGGGT GGAGCATGTCCTTCACACTACCGATCGGCTATTAGATATCGAGGTTAAAT TTAACAGAAAGCTAAGCTAAGCTGCGATGCTGACGGTATGCGTATACACG AAAATTTTGGTTGAATTTTTCTAACACTACAAAGATGTTGAATTGTTATA TTGAAGAGAAGCTTCAAGGTATTGAAGCTCGTTGTGTATTTCGCTCATTT CTAGCTCACATTCACTTCCTTTGCTAAATACAAGGCAAAACACCCTGACA GCAATTGCTCTTCTTAATTTCAAGAAATCTTTGAGGGATGAAATTTTTAG AAACATTCCAAGTTTTTAAATAGTAAAATCAGATACTTGCTAGGTATAAA AAAACAATTTGACAACACTCCTGACACCGCCAGAGATATCAACTGCTGGT TATTTGACGCAGCAGGGATAACTAATGATTTAGAATTTAACTTTGTCAGC AATGTAAATTTGTATTAATCAATTAATTAATTAATTAATTAATTAATACG TATAGAGTAATTAGTTTCGACAACGTAAATAATTCATCACAAAAAAGACT ACTACATCACAAGCCCATCACAAGGTGCAATAGTCAGAAGCTTTTAGATA AAGATTTAACTCGAATAAGATCTTTTGCTGTGTTGTGTATGGTGATGTGA ATAGTTGAAAAGATGTGGAAAAGGGATATATCCCATAGTGGGAAACACTG TCTCTCCTTTTGGAAGAATTTCTATATACTAGAGTGTTCATGTATGTTTT GGAGATTGAAGTTTCTAAGGGCTCTGACCATAGTGAATTTTTCAGAATTG CCGTGTTTAAAATGTGTTTTCTGACTGATGTGACCAACAAAACTATGGCA TGTTATACATTTTCTGTTAGACAAACTATTCCTGAATCTGAAAATNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ATTTTCCGCAAAATTTAAAATAGTTCAACTCTTTGCGGACAGTGTAAAGA AATTTTGAAACAAAAAAGTTAATTACCCATTAAAACTAAGCACTTTTTGT AAAACAGGGTGATGCAACATACTATTAACATCTTTTTAAAGTTCATAACG TAATTTTTGCAATTAAATTCTTAATTACTCTTAAGGGATTCGATTAAAAA GGCAATTCTTTGTTAAAAGTGTTAAGGAACCTGAAATATAACTTTTATGT TCAAATACCAAAATAAATTTTTGGACTATGGTCAGAGCCCTTAAAGCCCG AAGAACCTTTATTTACGCCGCTTTAGTTAAATTGACAGATTGAATCCAAT GCTTTCTTTGTTTTCACCATTGATGTTTTCACACAGTATATTTTTCAAAA TTTAGCAATGGAATTTTAACTTTCAATCTGCCGTCTATGTGAGAGCCACG CGGGTCACGTGTCTTAGATAGGAAATTAAGTGGCATCATTTCCCATCTAG CCACTGCAGGACTTTGAACTCATTGGAAAAGGAGACAGGGGTGTAAAATC TTGATGTTATAAAGAGATGAGAGAAATCCGATACAACATATTTTTCTGGC ATATAAAGTTACTGTCATTTTAACAACCATAAACTTTGATTTGAAATGGT GTTTCAAACAGAGCTTTCGTTGTTTAATGTTAACGAAAGCAAATCTTTAT CATAGTATTTTTTTCCAAGGGGAAAACCTTTCAGAGAGAAAGTGTCATTA AAAACAAAAATATCATTTGCTTTTTTCATAACTTTTGACACCATCATCAC ATTTCTAAGAAACACTGATTCTTTCCGGTAGCTAAAAAGTGAAATTATTG CTAACATCATTATGGTGAAAGTTCTTTTACAGATGAAAGGGATTATTTGA CTGGAATAATTGTTTATGTGTTCTAATTCATATTATGTGTTTGGTTTGGT GACATGAAGTTTAAAGCAACGAAGCTAAAGTGAAATAAAGAATGCGCTAA AGAACATTTTCATTTTAAAAGCAGCGCAAATCAAGCTCCACTTTTCCTTG CCTGAGTAAGGTTGAAGATTCTCCTCTAGCACTTCGAGTTTTAAAATCAA TTGTTATAGTGTCATTAATGCTTTTCTCAGATTCTAACTCAAACTAAATC TTTCTTTATAGAGTTTTACGACGAGGAGATGAACACAGAAATTCATATTG ACGGAGATGGTGTATCATCAGATAGACATGATCCAATACTGAAGATGAGA GATTATCTGGACAGCAAACCTGGATATGCCGTTCTAACTAGCATTGTAAG TATTGAAAAAAATTCATTCATAGTATATCAGCACGGATCCTTTAGTAAAT GTGGATTCCAGTAATCTAACCTTTCTACTACTCCCAAATACTCCAGGAAA TACAAGGGGGGACTCACGTTTGCAAACCCAAAATTCCAATTGACAGTAAA CAAATCAAAAATGGAAGTACTCTATTAAAGATAGTGAATGATAGTAACGA TAGTCCAATACTGAAGATGAGAGATTATTTTATAAGGAAATCTGAATGCT GCACTAACTACCATTTTGTAAAAACGCCCCCTTCTCACAGACCCAGTGGG AAGCCTTCCCCACTGGAAAAATTGGCCAAAACATTTTCCCCAGTGGAAGA TTATACTCTAGTTTTTGTCCCCGCTGAAAATCCTCACTGCAAATTATTGT GCTATTTTCTCCATCCCTATTGAATTCTCTGGCTAGAAAACAATGGAATT CAAATCCCAAGCTATGAAAAGCATGGGGATATCAATATCGAGTTTTAGTT CGTTATTTTTACCCCCACTGGCTGATAAAATCCCACCGAGTTTGTGAGAA GGGGATGTGTAAGAGGTTCTAGACAAGGTTATCCCTCCAATAGTTTGTAT TCATAGGATATGAAAATGTTTTGAATTATTTCAAGAGGGTAAATTCTCTT TGCCTAGGGATAAACTTGTTTTGCCAAGGTATGCTTTTCCCAGTGATAAA TTTGCTTTCCTCGGAGTAAATTTTGTTCTGCCAGAATTTCTGTGATGGCT GTTCTTACTGTTTTCTCATTTCATGTTTTTCATGATTTATTCATCTATAT TCTATTCTATATAGTTTTTCCTGACCGCTGGTTGGGTCATATTAGTCACG TGGTCACAGAACAAAGAAAATCATTGGCAAGCAGAAAAAATAAGTGGTAT CACATCTTTCTTTTTATTCGCAACCATTACACCTTGGGCTATGATGCTGT TTTTGATGACGTTAATGGCATTAAGAAGGAAAAAGAAAATCAATGTTTGG TTTTGTATTGTAAGTAAACATTTACACGTTTTTTTTTTTAAGAAACACAC TTTTAAGAAATATGCTGAGGCTGAGAATGAGAAAATATTTATTTCTTATA AATATAAATTAATATATTTTGTTTTTTTTAAGAACCTTCCAATCAAAACA AATGTTTTTTTCCTTGCATGAAAAATAGACTGATTATATCAAAAAGTTTA GAAACATGTAAAAAACATTTAAGGCTCAAAAAGCCGATTTTTTAAGAAAC ACTGAGGCTGCTTGGTAAAACTAGTTTCTTAAAAAACTAAAAACGTGTAT ACACCCCTGTCTCTATACAGCCACATTTGAACTTTTTTCCACAGTGAGTA TGAAGAATTTAATCAAACCCCAATGTGAATAAAAATTATATTGTTTCAAG CTAAAAGAATTCAATAGAAATAATTTTTTTCATAGAATTTCAAATGAAAA TAAAAACAAAGTCGATTTTTCAGTTTGATCAAAGCTGTAGGGTATTTTTC CTACCTCAGACGTAATTTTGGCCAAATTTTCAAGCAGTTTTTATGCTATA AGTACATTAATCCTTTTGCTTCGGAATTCATCATTTTAGATTGGCTATTT CAGTGTTTTCTGGTCAATCATCGTTATATGTGCTTCGTCCGTATTATATC ATAATGCAACTTTGGTATTATGTCAACGATATAGATGTAATGTCCTCAAA TATGTGGCAGTAAGTCTTATAGTTTATAGCTCGGTTGGTACAGGGTGGTA CAGGGTGGTACAATGTATAATGCTTTTTGTAGAGCGTTATTTGGGAGTCA AAGACAGTATATTGTTTTTTTTATAACCCGTTCTTTGTGACCCGGTGAAT TGTTGCTTGCAGAAATTTAATTGAATAAAATAATGAAAAGAAATTTTCTT TCTGTAAACAAACCCCCTATATTTTTAGAATATTGCAAATCAAGCTGACA ATATATTGCGGACATCTTTTCGATATATTGCCGGAACTCAGCAATATATT TTCAATATATTGTGTAGTATATGTAGCCCTTAAGGATAAACTAACTCTAA ACTGTCATAACCACTAGCAAAGGCATTCGAGAGGGGATGTCAGTTTAATA TAGGTTCCTCTTGGAATAAAATTTCAGGCTACTTTTATTTCTCACCTGGG ACATTTTTGGCGGTGTCTATTAGTTGGGAGTGTTATCAGTGGCGTTGTGG GAAAATTTTTCTGTAGGGGCCAAAGTCAATTGTTTAAAAATAACGCCCCT TCCCTAATTTTCCAAAGTGGTGCCCCCACCCACCAGTTTCTAAACTTTTA CTAATTCATCTGCCTAGGCATAATGAGGAAGGAAATATTTAGTGGAGAAG AGTAGTAGATATATCTTTGATGAATGGAAAAGGGAAAAACACAGAAAACA GGCCCCACCATGGTTGGGGCCGACTAGAAAATTTTGAAAATCGACTACCA AGATACCGCTAAATCAGTAAATAAAACTAGACAAATTTGACACTGTGTAA TGCGAGCGAAGCGAGCGAAAAAATTGATGTCTTATGATTTCAAAATTGTT GTCAGCAAATTGGTCTTGAGGAGCAGTTAGATTTTCATTTAATAATAGTA TATTGTACACAAAAAAACTTATAAATTAGCTAGATTGCAAAGAAGTTACC AAATAACTGTATAGCGAGCGACGCGAGCGAAAAAAATTGCAAGTATTTTA AGACTCCTGGGGCGAAATTTAAGGCGCATAAAGTATGATTTTTAAAATTG GGGCGTTTAAAAAAATCTCTTTTGGTGCCCCATGCTCTTCGGCGCCCCTT CGAAAAAGCTCCGCTGGGGGGGGCATGGCCCCCCGGCCCCCCCTGCCACA ACGCCACTGAGTGTTATGCCTTTTATTTAGAAAGTATTCAAAAACTTTTT CTACTATTTTTCCGGATGCCCGGAAAATCGGTACGGACATTTGAAAGAAG GACTGCTATCATCGTAATATATTTTTCTATTTCAGGCAAGTCTTGGTATA ATTGGTGGTCTATCACTTGCAGTTCAGGCGTATCTTCACTTAAGAGTACT AAAGAAAAATCGCTGTTGTAAAGAAAGCGCTCCATATAGCAAAATGACTA AAGGAAGAGGGATTTGAAGCTGAAGAAATCTCCAAACCCCAAAGCAAAAA AGTATTGATGTTTCCATAGCTGGTACCAAAACAGCAATACAACGTCCATT TATCGTTCATAACATCCATCTCGCACCCGTTATAGCTAGTTTATGTATTC GAGATGTATCGAAGGAGACGGTATACCTTATCGGGGAAAACTTCGTCGGG GAAAATTTTCGTCGGGAAAAATTCGTTACTTGCTGGTAGTTGGTAAACGC ATTAAGGGCGGGGGAAATTATCGTTGGGGAAAATATTCGTCACTTGTCCA AAATTTCGTCACTTTTCCCCGACAAAGTTTTCCCCGATAAGGTATTTTCC CCGATAAGGTATGGCATAGTTGGCATGTTCCCAAAATAGCTGGACAAAGG TAAAAAAAAAAAGACTACGTCTGGTTAGGTGAGCAAAGGCGATATGAGCC GTACTTCAACTATCGACTTTGTTTTATGTTAACTTCACTTACCGTTTCCC TCGATCTCCTCCAATACATACACTTGCTAATATGGACATGGTGGTGTTAG AAATGTTGTCAACCGTAAAGTAAAGAAACTGCACAACTATATAATTAAAT GCATCCATAAACCCTTAACGACGCGATTTTCTTTTAAGGGGTCTTGTAAA GTGGCGTGGTGGCAGGGTGCAGGTGGGCAAATGCCCCCCCCCCAGAGACC GGCCCTAAAGGTTGATAGGTTGTATAGGGCTATGGCCCGAACGTACCTGG TGAAAAAACATACATCTTTGTTTGGACGTGACGTTAGAATATTTAGGTAT TTATAATAAAATTGAAAATATTTAGTTTTTATACTTATAGTGGAAAACAT TATTAGGTTTTCATCTTAGAAAACCAAAGTCATTGTACATAAATATTACA ATTGATGATCTGACTTACCTTAAGAAGCACTTCCAGGAAATGTTCGTACA TGGGGGTGGAGGATATATAGTCTGGGGGGGGGGTAGTGAAAAATCTAAAT TTGCCTTGTCTAGGAGAAAAATCTGCTCTGATTATGGGTGATTTTGAATG TCCGGGGGTCAATTGATGCTTGTCCAGGGGGCTGAGAATTATACTGCCCG TTGGGTCAAAAGTCACAATCTTCGGCGTGTAAAATTCAAAAAATGTTATA TCCTCCTGCTCCCAATATTCAAATATTTTCTAGAAGAGTCCATTGTTCCA TAACTTTATATTCAAAGTCTCTTTCTCTAGAGCTTCTCCGATATTGTAAT AGGTGTAATCCTTTGTTGTTATTATGAATCCATTACCAAAACCAAAGTTA TCAAAATCCCATTACTTTAATCCTATCGTTTCGAAAATCTCTAGAAAGCT TCATATATAACACACTGGAGTAAGTGATTCGTCGGAGAAAGAAATGATAT TCAACTTCGATGTTTATAAATGTGAAAAAAGAAATACATGAATGCTTGGA CAACCAAACCAATAGTACAAAGGAAACCAAATGCCTAAAAGGTGGGAAAA CATTTCTTATTAATGAACTATCGTGAAGTTGGGTAACATCAGTGGAGGCT AACATGCATAGCCCTCAAATGAATGACCTGGCTGGTCCTTAAAATACAAA GTTAAATCAAAACAAAAATGGTAGAGTAGAGCTGCGAGCGGAGCTGCGTA GTTCATTTGTTTTGAAATTTTGCTCCTTTGATTGGTCATTCATTTGAGGG CTGTGCATGTTAGCCTCCACTGATGCAAGTTACCCGATCTCACGGTATCA AAATAAAAAACAAAATTAGGTGTTAGAAAAAAGTCAGCATCACAATCCT

Coding sequence (CDS) from alignment at sc0000093:431201..441299-

>TCONS_00009409 ID=TCONS_00009409|Name=TCONS_00009409|organism=Clytia hemisphaerica|type=CDS|length=3015bp|location=Sequence derived from alignment at sc0000093:431201..441299- (Clytia hemisphaerica)
GCAAGTCTTGGTATAATTGGTGGTCTATCACTTGCAGTTCAGGCGTATCT
TCACTTAAGAGTACTAAAGAAAAATCGCTGTTGTAAAGAAAGCGCTCCAT
ATAGCAAAATGACTAAAGGAAGAGGGATTTGAATTGGCTATTTCAGTGTT
TTCTGGTCAATCATCGTTATATGTGCTTCGTCCGTATTATATCATAATGC
AACTTTGGTATTATGTCAACGATATAGATGTAATGTCCTCAAATATGTGG
CATTTTTCCTGACCGCTGGTTGGGTCATATTAGTCACGTGGTCACAGAAC
AAAGAAAATCATTGGCAAGCAGAAAAAATAAGTGGTATCACATCTTTCTT
TTTATTCGCAACCATTACACCTTGGGCTATGATGCTGTTTTTGATGACGT
TAATGGCATTAAGAAGGAAAAAGAAAATCAATGTTTGGTTTTGTATTAGT
TTTACGACGAGGAGATGAACACAGAAATTCATATTGACGGAGATGGTGTA
TCATCAGATAGACATGATCCAATACTGAAGATGAGAGATTATCTGGACAG
CAAACCTGGATATGCCGTTCTAACTAGCATTATGTCGAAACTACCATACG
AAGGCAAGTCTTGGTATAATTGGTGGTCTATCACTTGCAGTTCAGGCGTA
TCTTCACTTAAGAGTACTAAAGAAAAATCGCTGTTGTAAAGAAAGCGCTC
CATATAGCAAAATGACTAAAGGAAGAGGGATTTGAATTGGCTATTTCAGT
GTTTTCTGGTCAATCATCGTTATATGTGCTTCGTCCGTATTATATCATAA
TGCAACTTTGGTATTATGTCAACGATATAGATGTAATGTCCTCAAATATG
TGGCATTTTTCCTGACCGCTGGTTGGGTCATATTAGTCACGTGGTCACAG
AACAAAGAAAATCATTGGCAAGCAGAAAAAATAAGTGGTATCACATCTTT
CTTTTTATTCGCAACCATTACACCTTGGGCTATGATGCTGTTTTTGATGA
CGTTAATGGCATTAAGAAGGAAAAAGAAAATCAATGTTTGGTTTTGTATT
AGTTTTACGACGAGGAGATGAACACAGAAATTCATATTGACGGAGATGGT
GTATCATCAGATAGACATGATCCAATACTGAAGATGAGAGATTATCTGGA
CAGCAAACCTGGATATGCCGTTCTAACTAGCATTATGTCGAAACTACCAT
ACGAAGGCAAGTCTTGGTATAATTGGTGGTCTATCACTTGCAGTTCAGGC
GTATCTTCACTTAAGAGTACTAAAGAAAAATCGCTGTTGTAAAGAAAGCG
CTCCATATAGCAAAATGACTAAAGGAAGAGGGATTTGAATTGGCTATTTC
AGTGTTTTCTGGTCAATCATCGTTATATGTGCTTCGTCCGTATTATATCA
TAATGCAACTTTGGTATTATGTCAACGATATAGATGTAATGTCCTCAAAT
ATGTGGCATTTTTCCTGACCGCTGGTTGGGTCATATTAGTCACGTGGTCA
CAGAACAAAGAAAATCATTGGCAAGCAGAAAAAATAAGTGGTATCACATC
TTTCTTTTTATTCGCAACCATTACACCTTGGGCTATGATGCTGTTTTTGA
TGACGTTAATGGCATTAAGAAGGAAAAAGAAAATCAATGTTTGGTTTTGT
ATTAGTTTTACGACGAGGAGATGAACACAGAAATTCATATTGACGGAGAT
GGTGTATCATCAGATAGACATGATCCAATACTGAAGATGAGAGATTATCT
GGACAGCAAACCTGGATATGCCGTTCTAACTAGCATTATGTCGAAACTAC
CATACGAAGGCAAGTCTTGGTATAATTGGTGGTCTATCACTTGCAGTTCA
GGCGTATCTTCACTTAAGAGTACTAAAGAAAAATCGCTGTTGTAAAGAAA
GCGCTCCATATAGCAAAATGACTAAAGGAAGAGGGATTTGAATTGGCTAT
TTCAGTGTTTTCTGGTCAATCATCGTTATATGTGCTTCGTCCGTATTATA
TCATAATGCAACTTTGGTATTATGTCAACGATATAGATGTAATGTCCTCA
AATATGTGGCATTTTTCCTGACCGCTGGTTGGGTCATATTAGTCACGTGG
TCACAGAACAAAGAAAATCATTGGCAAGCAGAAAAAATAAGTGGTATCAC
ATCTTTCTTTTTATTCGCAACCATTACACCTTGGGCTATGATGCTGTTTT
TGATGACGTTAATGGCATTAAGAAGGAAAAAGAAAATCAATGTTTGGTTT
TGTATTAGTTTTACGACGAGGAGATGAACACAGAAATTCATATTGACGGA
GATGGTGTATCATCAGATAGACATGATCCAATACTGAAGATGAGAGATTA
TCTGGACAGCAAACCTGGATATGCCGTTCTAACTAGCATTATGTCGAAAC
TACCATACGAAGGCAAGTCTTGGTATAATTGGTGGTCTATCACTTGCAGT
TCAGGCGTATCTTCACTTAAGAGTACTAAAGAAAAATCGCTGTTGTAAAG
AAAGCGCTCCATATAGCAAAATGACTAAAGGAAGAGGGATTTGAATTGGC
TATTTCAGTGTTTTCTGGTCAATCATCGTTATATGTGCTTCGTCCGTATT
ATATCATAATGCAACTTTGGTATTATGTCAACGATATAGATGTAATGTCC
TCAAATATGTGGCATTTTTCCTGACCGCTGGTTGGGTCATATTAGTCACG
TGGTCACAGAACAAAGAAAATCATTGGCAAGCAGAAAAAATAAGTGGTAT
CACATCTTTCTTTTTATTCGCAACCATTACACCTTGGGCTATGATGCTGT
TTTTGATGACGTTAATGGCATTAAGAAGGAAAAAGAAAATCAATGTTTGG
TTTTGTATTAGTTTTACGACGAGGAGATGAACACAGAAATTCATATTGAC
GGAGATGGTGTATCATCAGATAGACATGATCCAATACTGAAGATGAGAGA
TTATCTGGACAGCAAACCTGGATATGCCGTTCTAACTAGCATTATGTCGA
AACTACCATACGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005269XLOC_005269Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009409-exon-sc0000093-1575043694:441035..441299TCONS_00009409-exon-sc0000093-1575043694:441035..441299Clytia hemisphaericaexon
TCONS_00009409-exon-sc0000093-1575043694:436105..436238TCONS_00009409-exon-sc0000093-1575043694:436105..436238Clytia hemisphaericaexon
TCONS_00009409-exon-sc0000093-1575043694:435091..435285TCONS_00009409-exon-sc0000093-1575043694:435091..435285Clytia hemisphaericaexon
TCONS_00009409-exon-sc0000093-1575043694:434391..434510TCONS_00009409-exon-sc0000093-1575043694:434391..434510Clytia hemisphaericaexon
TCONS_00009409-exon-sc0000093-1575043694:431201..433114TCONS_00009409-exon-sc0000093-1575043694:431201..433114Clytia hemisphaericaexon
TCONS_00009409-exon-sc0000093-1510915933:441035..441299TCONS_00009409-exon-sc0000093-1510915933:441035..441299Clytia hemisphaericaexon
TCONS_00009409-exon-sc0000093-1510915933:436105..436238TCONS_00009409-exon-sc0000093-1510915933:436105..436238Clytia hemisphaericaexon
TCONS_00009409-exon-sc0000093-1510915933:435091..435285TCONS_00009409-exon-sc0000093-1510915933:435091..435285Clytia hemisphaericaexon
TCONS_00009409-exon-sc0000093-1510915933:434391..434510TCONS_00009409-exon-sc0000093-1510915933:434391..434510Clytia hemisphaericaexon
TCONS_00009409-exon-sc0000093-1510915933:431201..433114TCONS_00009409-exon-sc0000093-1510915933:431201..433114Clytia hemisphaericaexon
TCONS_00009409-exon-sc0000093-1491911889:441035..441299TCONS_00009409-exon-sc0000093-1491911889:441035..441299Clytia hemisphaericaexon
TCONS_00009409-exon-sc0000093-1491911889:436105..436238TCONS_00009409-exon-sc0000093-1491911889:436105..436238Clytia hemisphaericaexon
TCONS_00009409-exon-sc0000093-1491911889:435091..435285TCONS_00009409-exon-sc0000093-1491911889:435091..435285Clytia hemisphaericaexon
TCONS_00009409-exon-sc0000093-1491911889:434391..434510TCONS_00009409-exon-sc0000093-1491911889:434391..434510Clytia hemisphaericaexon
TCONS_00009409-exon-sc0000093-1491911889:431201..433114TCONS_00009409-exon-sc0000093-1491911889:431201..433114Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009409-proteinTCONS_00009409-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000093supercontigsc0000093:431201..441299 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.00396463 0.00314841 0.0011289 0.00196715 0.0245669 0.00896877 0.0159412 0.00997188 1.90496 0.027065 0.0127417 0.00513242 2.14744 0.00381519 0.00944578 1.96982 0.0122558 0.0140277 0.0206921 0.0157237 4.87136 4.14021 0.0121936 3.29374 3.34364 0.0213717 4.34315 7.07685 0.00856218 0.0182258
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009409 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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