TCONS_00009399 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009399
Unique NameTCONS_00009399
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2600

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009399 ID=TCONS_00009399|Name=TCONS_00009399|organism=Clytia hemisphaerica|type=transcript|length=2600bp
CACACATCAAACATAGAACACAAAATTTATGTGAGTGATAGTTGCTTTAT
AAAACTTATAGTAAAATGCTTGGTATTGTCAGTAAAATCAAATCGTTGAA
ACCAACTAAGATCGATCCAACAAAATGCGATCCAAGGAGATCTTTATATC
AACAGATTCTGAGAAACAGTGAAGCAACATCAGAAAGACAAGAGAGGCAG
TTCAATTTAGGGAGCACGTGTTTCACAAGTGATCCAGTATACGCGGCTAA
ATTCGTTCTTTGGAGAGAATACTGTGACAGCTCACTTTTCGTTGAAGGTG
AACACACTAGTGTCTTCATACCTCCGACGTTTGCATCATGTCAGTACACG
AACAATTCTCCAGTAGCTATCCTCGATTTTGAAGTCAAGGCAGATATTGA
GAGACTTGTAAACAATTTGCTTTATCATTCACCAGACTATTGGCTGACGA
TAGAATTACACAATTTTATGCAAACACAATCCGGAGAACATCGCACTATC
GACAAGAAGGAATTCGACCAGTGGGTTTTCAACCTTAAAATTATGTATCT
GGTCATTGAAGAGTTGAACAATGAACAGTTGAATTTACCATCAACAACTT
CCAGTATTGAAGTTTTCGTCCAAGCTTGCATTAATAAATTTCCTTCGAAT
TCACCAGAGTCGGCACTGAAAACTCTTCTCAGACAGGATCTTTCCAGAAG
AATCTCCAAAGACaaaaagaatctaaaaaaactGGTTGAGGATAACCCAC
CACAAGACTCGAACCTTAAATGGCTTTTTGATTTGGAGTTGTCGCNTAAA
TTTCCTTCGAATTTACCAGGGTCGGCACTGAAAACTCTTCTCAGACAGTA
TCCTTCCAAAAGAATCTCATTCAAAAAGAATCTCAAAAAATTGGTTGAGG
ATAACCCACCACAAGACTCGAACCTTTTATGGCTTTTTGATTTGGAGTTG
TCGGAGTTGGGAGAAAAGCACGAGCAGTGGATTTACAATCAGTTGTTATC
ATTAAAAGATGACGTTCTCCAGGACACAGTTGTTCTTTCATCGCCCTGTT
TTTTgacaaatgtgaaaaataaaatgcACAAAGAGATGGACTTTTTGATA
ATCTCATGGAAGAGAAAACTCATAATATCTATTGAAGCAAAACGTTCGCT
CTTCAGCGATAAAGCTTTTGATCAATTGgaatcgaactttcgaatctttg
aGGAACGGCTAGGAGATCAACTAGGATCCGAGTGGATCTTTTTCCCCGTT
GTCTGTGTAGAGAACGACTCCTATTTAATAAACAGTAAACATTACATCAC
CACTGAAACTGAAATTCAACCGTGGCTAACCAGTATTTTCAGAGGATTCC
CAACCGCACCAGTCATCATAAAACCGACTCTTCTTGATGAGACTAAAAAC
CTCCTTCAGATTTTAATCTTCGCATTACATATCATGAAAAATGACATAGT
CGCACCTATTACCACCACAAACTGGGTCGAATACACAAGTAATGCGATTG
ACAATATCTCAACATGTCAGAACAtccttttctactccaaccAACAAATG
GCAATCATGAATCTTAGCGATACACGATATGGCAGGCTGATCATTTGTGG
AAATTTTGGTGTTGGCAAAAGTTTATTGCTCCAGCAAAAAGCAATACAAA
TAAACCAACAACCTCGATATCAAGGGAAAGTTATGTTTGTATCGGATCGC
GTCGGCCAGAGATTAAATTCGATACTGAGTTATCGTCTGATGGTAGATTT
AAAAGAAGATCACGGAATATTTGTCGAGGGAATGGACATCAATTATCAAC
ATTCAGATCTAATACAAAAGGTCGAAAAGTATGGTATCAAAGCAGTGTTT
ATCGACGAATGTGAGATGGGATATACCAGCGATGGTCAGTGGATGAAAAA
ATTGATATCACTTGTCGACTTTTTGTGGATAGTCCCATCAACATCGATGT
TATCTATGAGATCTCTTCTAAGTAAATATGAGCGAGATTTTACTTTTCTG
GATCTATCAAAAAACCTTAGGAACACTCCACAGATCGTGCAAGCAGCTAA
AGCAGAAGCTGAAAGAAGTGAGTACCTATATGGTGAAGGGATTGCAATGC
CTCCTCCAAATTTCCCTAAAGGGAGAGATGCGATATTATCCAACTCATTC
GAAGATGGGTTGAAAAAGGCACGAATAATGACCAAGAGCGGTATCCTTGT
TATCACTGACAACATCAATCACATTTCTAACGGGTCAGCCATGGATCAAA
TGCGCGAGAACTGGAAATCGTTACATCCAGAAAGAAATGATTTTACAGAT
GACGAAAACCCATACAAGTTTCTTACTCAGggtaatattttggtcatcgc
aGGGAATCTATCTTTCGGTTTCGAATGGCCGACCATTATATTATTTCAAG
ATGGAAATGATTATCAGTTTGGTGGACCTTCCTTACATCGGTGTAATTTT
ATAATGAGATGTACAACCGATCTTATTATCGTTCGTACGGAAAATTAAAA
CTGTTTGaatattaattatttttaatgaaGAATATTCAGTGATGAAATGT
ACAGATTAACAAATTTGTCAATCAGAATGTACAAATTGACACTTGATGCT
Run BLAST on NCBI

protein sequence of TCONS_00009399-protein

>TCONS_00009399-protein ID=TCONS_00009399-protein|Name=TCONS_00009399-protein|organism=Clytia hemisphaerica|type=polypeptide|length=810bp
MLGIVSKIKSLKPTKIDPTKCDPRRSLYQQILRNSEATSERQERQFNLGS
TCFTSDPVYAAKFVLWREYCDSSLFVEGEHTSVFIPPTFASCQYTNNSPV
AILDFEVKADIERLVNNLLYHSPDYWLTIELHNFMQTQSGEHRTIDKKEF
DQWVFNLKIMYLVIEELNNEQLNLPSTTSSIEVFVQACINKFPSNSPESA
LKTLLRQDLSRRISKDKKNLKKLVEDNPPQDSNLKWLFDLELSXKFPSNL
PGSALKTLLRQYPSKRISFKKNLKKLVEDNPPQDSNLLWLFDLELSELGE
KHEQWIYNQLLSLKDDVLQDTVVLSSPCFLTNVKNKMHKEMDFLIISWKR
KLIISIEAKRSLFSDKAFDQLESNFRIFEERLGDQLGSEWIFFPVVCVEN
DSYLINSKHYITTETEIQPWLTSIFRGFPTAPVIIKPTLLDETKNLLQIL
IFALHIMKNDIVAPITTTNWVEYTSNAIDNISTCQNILFYSNQQMAIMNL
SDTRYGRLIICGNFGVGKSLLLQQKAIQINQQPRYQGKVMFVSDRVGQRL
NSILSYRLMVDLKEDHGIFVEGMDINYQHSDLIQKVEKYGIKAVFIDECE
MGYTSDGQWMKKLISLVDFLWIVPSTSMLSMRSLLSKYERDFTFLDLSKN
LRNTPQIVQAAKAEAERSEYLYGEGIAMPPPNFPKGRDAILSNSFEDGLK
KARIMTKSGILVITDNINHISNGSAMDQMRENWKSLHPERNDFTDDENPY
KFLTQGNILVIAGNLSFGFEWPTIILFQDGNDYQFGGPSLHRCNFIMRCT
TDLIIVRTEN
Run BLAST on NCBI

transcript from alignment at sc0000093:234641..237612-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009399 ID=TCONS_00009399|Name=TCONS_00009399|organism=Clytia hemisphaerica|type=transcript|length=2972bp|location=Sequence derived from alignment at sc0000093:234641..237612- (Clytia hemisphaerica)
CACACATCAAACATAGAACACAAAATTTATGTGAGTGATAGTTGCTTTAT AAAACTTATAGTAAAATGCTTGGTATTGTCAGTAAAATCAAATCGTTGAA ACCAACTAAGATCGATCCAACAAAATGCGATCCAAGGAGATCTTTATATC AACAGATTCTGAGAAACAGTGAAGCAACATCAGAAAGACAAGAGAGGCAG TTCAATTTAGGGAGCACGTGTTTCACAAGTGATCCAGTATACGCGGCTAA ATTCGTTCTTTGGAGAGAATACTGTGACAGCTCACTTTTCGTTGAAGGTG AACACACTAGTGTCTTCATACCTCCGACGTTTGCATCATGTCAGTACACG AACAATTCTCCAGTAGCTATCCTCGATTTTGAAGTCAAGGCAGATATTGA GAGACTTGTAAACAATTTGCTTTATCATTCACCAGACTATTGGCTGACGA TAGAATTACACAATTTTATGCAAACACAATCCGGAGAACATCGCACTATC GACAAGAAGGAATTCGACCAGTGGGTTTTCAACCTTAAAATTATGTATCT GGTCATTGAAGAGTTGAACAATGAACAGTTGAATTTACCATCAACAACTT CCAGTATTGAAGTTTTCGTCCAAGCTTGCATTAATAAATTTCCTTCGAAT TCACCAGAGTCGGCACTGAAAACTCTTCTCAGACAGGATCTTTCCAGAAG AATCTCCAAAGACAAAAAGAATCTAAAAAAACTGGTTGAGGATAACCCAC CACAAGACTCGAACCTTAAATGGCTTTTTGATTTGGAGTTGTCGCNTAAA TTTCCTTCGAATTTACCAGGGTCGGCACTGAAAACTCTTCTCAGACAGTA TCCTTCCAAAAGAATCTCATTCAAAAAGAATCTCAAAAAATTGGTTGAGG ATAACCCACCACAAGACTCGAACCTTTTATGGCTTTTTGATTTGGAGTTG TCGGAGTTGGGAGAAAAGCACGAGCAGTGGATTTACAATCAGTTGTTATC ATTAAAAGATGACGTTCTCCAGGACACAGTTGTTCTTTCATCGCCCTGTT TTTTGACAAATGTGAAAAATAAAATGCACAAAGAGATGGACTTTTTGATA ATCTCATGGAAGAGAAAACTCATAATATCTATTGAAGCAAAACGTTCGCT CTTCAGCGATAAAGCTTTTGATCAATTGGAATCGAACTTTCGAATCTTTG AGGAACGGCTAGGAGATCAACTAGGATCCGAGTGGATCTTTTTCCCCGTT GTCTGTGTAGAGAACGACTCCTATTTAATAAACAGTAAACATTACATCAC CACTGAAACTGAAATTCAACCGTGGCTAACCAGTATTTTCAGAGGATTCC CAACCGCACCAGTCATCATAAAACCGACTCTTCTTGATGAGACTAAAAAC CTCCTTCAGATTTTAATCTTCGCATTACATATCATGAAAAATGACATAGT CGCACCTATTACCACCACAAACTGGGTCGAATACACAAGTAATGCGATTG ACAATATCTCAACATGTCAGAACATCCTTTTCTACTCCAACCAACAAATG GCAATCATGAATCTTAGCGATACACGATATGGCAGGCTGATCATTTGTGG AAATTTTGGTGTTGGCAAAAGTTTATTGCTCCAGCAAAAAGCAATACAAA TAAACCAACAACCTCGATATCAAGGGAAAGTTATGTTTGTATCGGATCGC GTCGGCCAGAGATTAAATTCGATACTGAGTTATCGTCTGATGGTAGATTT AAAAGAAGATCACGGAATATTTGTCGAGGGAATGGTGAGTAAAAGTAAAC TTAATTACTGCACGATTTAACGTCCATGGTTCCCAGAAATTGGGGTTGGG CGCCTTCCTCTGATGATCGTACGCCAGGCTGCCCGGTCGTTAGTCAAGTC GACAGTCGCATTAACAATTTTGAGGTCATCTTTAATATTGTCGATCTTTT TTCTTGTACGACATGACATTCAATGTTTCGATTCATTGTATTTCAGAATA TTTTGAACTACATCTTAGTTCAGCTTAGTTGGTTGATGGGAAAAAGCAGT TTTTAAAATTTTACACTTCTAGTCTCATTTTAACAGTTACTGGTTTCTTT TATTTGTATATTGTCAATATTTTCATTTTGTTTACTCTTTCATCTTTTTA CCTTAGGACATCAATTATCAACATTCAGATCTAATACAAAAGGTCGAAAA GTATGGTATCAAAGCAGTGTTTATCGACGAATGTGAGATGGGATATACCA GCGATGGTCAGTGGATGAAAAAATTGATATCACTTGTCGACTTTTTGTGG ATAGTCCCATCAACATCGATGTTATCTATGAGATCTCTTCTAAGTAAATA TGAGCGAGATTTTACTTTTCTGGATCTATCAAAAAACCTTAGGAACACTC CACAGATCGTGCAAGCAGCTAAAGCAGAAGCTGAAAGAAGTGAGTACCTA TATGGTGAAGGGATTGCAATGCCTCCTCCAAATTTCCCTAAAGGGAGAGA TGCGATATTATCCAACTCATTCGAAGATGGGTTGAAAAAGGCACGAATAA TGACCAAGAGCGGTATCCTTGTTATCACTGACAACATCAATCACATTTCT AACGGGTCAGCCATGGATCAAATGCGCGAGAACTGGAAATCGTTACATCC AGAAAGAAATGATTTTACAGATGACGAAAACCCATACAAGTTTCTTACTC AGGGTAATATTTTGGTCATCGCAGGGAATCTATCTTTCGGTTTCGAATGG CCGACCATTATATTATTTCAAGATGGAAATGATTATCAGTTTGGTGGACC TTCCTTACATCGGTGTAATTTTATAATGAGATGTACAACCGATCTTATTA TCGTTCGTACGGAAAATTAAAACTGTTTGAATATTAATTATTTTTAATGA AGAATATTCAGTGATGAAATGTACAGATTAACAAATTTGTCAATCAGAAT GTACAAATTGACACTTGATGCT

Coding sequence (CDS) from alignment at sc0000093:234641..237612-

>TCONS_00009399 ID=TCONS_00009399|Name=TCONS_00009399|organism=Clytia hemisphaerica|type=CDS|length=4866bp|location=Sequence derived from alignment at sc0000093:234641..237612- (Clytia hemisphaerica)
GACATCAATTATCAACATTCAGATCTAATACAAAAGGTCGAAAAGTATGG
TATCAAAGCAGTGTTTATCGACGAATGTGAGATGGGATATACCAGCGATG
GTCAGTGGATGAAAAAATTGATATCACTTGTCGACTTTTTGTGGATAGTC
CCATCAACATCGATGTTATCTATGAGATCTCTTCTAAGTAAATATGAGCG
AGATTTTACTTTTCTGGATCTATCAAAAAACCTTAGGAACACTCCACAGA
TCGTGCAAGCAGCTAAAGCAGAAGCTGAAAGAAGTGAGTACCTATATGGT
GAAGGGATTGCAATGCCTCCTCCAAATTTCCCTAAAGGGAGAGATGCGAT
ATTATCCAACTCATTCGAAGATGGGTTGAAAAAGGCACGAATAATGACCA
AGAGCGGTATCCTTGTTATCACTGACAACATCAATCACATTTCTAACGGG
TCAGCCATGGATCAAATGCGCGAGAACTGGAAATCGTTACATCCAGAAAG
AAATGATTTTACAGATGACGAAAACCCATACAAGTTTCTTACTCAGGGTA
ATATTTTGGTCATCGCAGGGAATCTATCTTTCGGTTTCGAATGGCCGACC
ATTATATTATTTCAAGATGGAAATGATTATCAGTTTGGTGGACCTTCCTT
ACATCGGTGTAATTTTATAATGAGATGTACAACCGATCTTATTATCGTTC
GTACGGAAAATTAAATGCTTGGTATTGTCAGTAAAATCAAATCGTTGAAA
CCAACTAAGATCGATCCAACAAAATGCGATCCAAGGAGATCTTTATATCA
ACAGATTCTGAGAAACAGTGAAGCAACATCAGAAAGACAAGAGAGGCAGT
TCAATTTAGGGAGCACGTGTTTCACAAGTGATCCAGTATACGCGGCTAAA
TTCGTTCTTTGGAGAGAATACTGTGACAGCTCACTTTTCGTTGAAGGTGA
ACACACTAGTGTCTTCATACCTCCGACGTTTGCATCATGTCAGTACACGA
ACAATTCTCCAGTAGCTATCCTCGATTTTGAAGTCAAGGCAGATATTGAG
AGACTTGTAAACAATTTGCTTTATCATTCACCAGACTATTGGCTGACGAT
AGAATTACACAATTTTATGCAAACACAATCCGGAGAACATCGCACTATCG
ACAAGAAGGAATTCGACCAGTGGGTTTTCAACCTTAAAATTATGTATCTG
GTCATTGAAGAGTTGAACAATGAACAGTTGAATTTACCATCAACAACTTC
CAGTATTGAAGTTTTCGTCCAAGCTTGCATTAATAAATTTCCTTCGAATT
CACCAGAGTCGGCACTGAAAACTCTTCTCAGACAGGATCTTTCCAGAAGA
ATCTCCAAAGACAAAAAGAATCTAAAAAAACTGGTTGAGGATAACCCACC
ACAAGACTCGAACCTTAAATGGCTTTTTGATTTGGAGTTGTCGCNTAAAT
TTCCTTCGAATTTACCAGGGTCGGCACTGAAAACTCTTCTCAGACAGTAT
CCTTCCAAAAGAATCTCATTCAAAAAGAATCTCAAAAAATTGGTTGAGGA
TAACCCACCACAAGACTCGAACCTTTTATGGCTTTTTGATTTGGAGTTGT
CGGAGTTGGGAGAAAAGCACGAGCAGTGGATTTACAATCAGTTGTTATCA
TTAAAAGATGACGTTCTCCAGGACACAGTTGTTCTTTCATCGCCCTGTTT
TTTGACAAATGTGAAAAATAAAATGCACAAAGAGATGGACTTTTTGATAA
TCTCATGGAAGAGAAAACTCATAATATCTATTGAAGCAAAACGTTCGCTC
TTCAGCGATAAAGCTTTTGATCAATTGGAATCGAACTTTCGAATCTTTGA
GGAACGGCTAGGAGATCAACTAGGATCCGAGTGGATCTTTTTCCCCGTTG
TCTGTGTAGAGAACGACTCCTATTTAATAAACAGTAAACATTACATCACC
ACTGAAACTGAAATTCAACCGTGGCTAACCAGTATTTTCAGAGGATTCCC
AACCGCACCAGTCATCATAAAACCGACTCTTCTTGATGAGACTAAAAACC
TCCTTCAGATTTTAATCTTCGCATTACATATCATGAAAAATGACATAGTC
GCACCTATTACCACCACAAACTGGGTCGAATACACAAGTAATGCGATTGA
CAATATCTCAACATGTCAGAACATCCTTTTCTACTCCAACCAACAAATGG
CAATCATGAATCTTAGCGATACACGATATGGCAGGCTGATCATTTGTGGA
AATTTTGGTGTTGGCAAAAGTTTATTGCTCCAGCAAAAAGCAATACAAAT
AAACCAACAACCTCGATATCAAGGGAAAGTTATGTTTGTATCGGATCGCG
TCGGCCAGAGATTAAATTCGATACTGAGTTATCGTCTGATGGTAGATTTA
AAAGAAGATCACGGAATATTTGTCGAGGGAATGGACATCAATTATCAACA
TTCAGATCTAATACAAAAGGTCGAAAAGTATGGTATCAAAGCAGTGTTTA
TCGACGAATGTGAGATGGGATATACCAGCGATGGTCAGTGGATGAAAAAA
TTGATATCACTTGTCGACTTTTTGTGGATAGTCCCATCAACATCGATGTT
ATCTATGAGATCTCTTCTAAGTAAATATGAGCGAGATTTTACTTTTCTGG
ATCTATCAAAAAACCTTAGGAACACTCCACAGATCGTGCAAGCAGCTAAA
GCAGAAGCTGAAAGAAGTGAGTACCTATATGGTGAAGGGATTGCAATGCC
TCCTCCAAATTTCCCTAAAGGGAGAGATGCGATATTATCCAACTCATTCG
AAGATGGGTTGAAAAAGGCACGAATAATGACCAAGAGCGGTATCCTTGTT
ATCACTGACAACATCAATCACATTTCTAACGGGTCAGCCATGGATCAAAT
GCGCGAGAACTGGAAATCGTTACATCCAGAAAGAAATGATTTTACAGATG
ACGAAAACCCATACAAGTTTCTTACTCAGGGTAATATTTTGGTCATCGCA
GGGAATCTATCTTTCGGTTTCGAATGGCCGACCATTATATTATTTCAAGA
TGGAAATGATTATCAGTTTGGTGGACCTTCCTTACATCGGTGTAATTTTA
TAATGAGATGTACAACCGATCTTATTATCGTTCGTACGGAAAATTAAATG
CTTGGTATTGTCAGTAAAATCAAATCGTTGAAACCAACTAAGATCGATCC
AACAAAATGCGATCCAAGGAGATCTTTATATCAACAGATTCTGAGAAACA
GTGAAGCAACATCAGAAAGACAAGAGAGGCAGTTCAATTTAGGGAGCACG
TGTTTCACAAGTGATCCAGTATACGCGGCTAAATTCGTTCTTTGGAGAGA
ATACTGTGACAGCTCACTTTTCGTTGAAGGTGAACACACTAGTGTCTTCA
TACCTCCGACGTTTGCATCATGTCAGTACACGAACAATTCTCCAGTAGCT
ATCCTCGATTTTGAAGTCAAGGCAGATATTGAGAGACTTGTAAACAATTT
GCTTTATCATTCACCAGACTATTGGCTGACGATAGAATTACACAATTTTA
TGCAAACACAATCCGGAGAACATCGCACTATCGACAAGAAGGAATTCGAC
CAGTGGGTTTTCAACCTTAAAATTATGTATCTGGTCATTGAAGAGTTGAA
CAATGAACAGTTGAATTTACCATCAACAACTTCCAGTATTGAAGTTTTCG
TCCAAGCTTGCATTAATAAATTTCCTTCGAATTCACCAGAGTCGGCACTG
AAAACTCTTCTCAGACAGGATCTTTCCAGAAGAATCTCCAAAGACAAAAA
GAATCTAAAAAAACTGGTTGAGGATAACCCACCACAAGACTCGAACCTTA
AATGGCTTTTTGATTTGGAGTTGTCGCNTAAATTTCCTTCGAATTTACCA
GGGTCGGCACTGAAAACTCTTCTCAGACAGTATCCTTCCAAAAGAATCTC
ATTCAAAAAGAATCTCAAAAAATTGGTTGAGGATAACCCACCACAAGACT
CGAACCTTTTATGGCTTTTTGATTTGGAGTTGTCGGAGTTGGGAGAAAAG
CACGAGCAGTGGATTTACAATCAGTTGTTATCATTAAAAGATGACGTTCT
CCAGGACACAGTTGTTCTTTCATCGCCCTGTTTTTTGACAAATGTGAAAA
ATAAAATGCACAAAGAGATGGACTTTTTGATAATCTCATGGAAGAGAAAA
CTCATAATATCTATTGAAGCAAAACGTTCGCTCTTCAGCGATAAAGCTTT
TGATCAATTGGAATCGAACTTTCGAATCTTTGAGGAACGGCTAGGAGATC
AACTAGGATCCGAGTGGATCTTTTTCCCCGTTGTCTGTGTAGAGAACGAC
TCCTATTTAATAAACAGTAAACATTACATCACCACTGAAACTGAAATTCA
ACCGTGGCTAACCAGTATTTTCAGAGGATTCCCAACCGCACCAGTCATCA
TAAAACCGACTCTTCTTGATGAGACTAAAAACCTCCTTCAGATTTTAATC
TTCGCATTACATATCATGAAAAATGACATAGTCGCACCTATTACCACCAC
AAACTGGGTCGAATACACAAGTAATGCGATTGACAATATCTCAACATGTC
AGAACATCCTTTTCTACTCCAACCAACAAATGGCAATCATGAATCTTAGC
GATACACGATATGGCAGGCTGATCATTTGTGGAAATTTTGGTGTTGGCAA
AAGTTTATTGCTCCAGCAAAAAGCAATACAAATAAACCAACAACCTCGAT
ATCAAGGGAAAGTTATGTTTGTATCGGATCGCGTCGGCCAGAGATTAAAT
TCGATACTGAGTTATCGTCTGATGGTAGATTTAAAAGAAGATCACGGAAT
ATTTGTCGAGGGAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005263XLOC_005263Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009399-proteinTCONS_00009399-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009399-exon-sc0000093-1575043694:235829..237612TCONS_00009399-exon-sc0000093-1575043694:235829..237612Clytia hemisphaericaexon
TCONS_00009399-exon-sc0000093-1575043694:234641..235456TCONS_00009399-exon-sc0000093-1575043694:234641..235456Clytia hemisphaericaexon
TCONS_00009399-exon-sc0000093-1510915933:235829..237612TCONS_00009399-exon-sc0000093-1510915933:235829..237612Clytia hemisphaericaexon
TCONS_00009399-exon-sc0000093-1510915933:234641..235456TCONS_00009399-exon-sc0000093-1510915933:234641..235456Clytia hemisphaericaexon
TCONS_00009399-exon-sc0000093-1491911889:235829..237612TCONS_00009399-exon-sc0000093-1491911889:235829..237612Clytia hemisphaericaexon
TCONS_00009399-exon-sc0000093-1491911889:234641..235456TCONS_00009399-exon-sc0000093-1491911889:234641..235456Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000093supercontigsc0000093:234641..237612 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0254879 0 0.189682 0 0.380188 0.185282 2.09843 1.84654 1.2268 0.482373 0.901975 0.433243 5.61661 5.41112 1.49637 1.03077 0.512387 0.246293 8.50173 12.6267 0.444734 0.440849 0.391299 0.69938 2.35778 2.04739 2.23805 2.23651 0.0164691 0.0335587
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00009399 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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