|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009378 ID=TCONS_00009378|Name=TCONS_00009378|organism=Clytia hemisphaerica|type=transcript|length=702bp
ATATCAAGATTAAAACAGACAGATGGCGCGTGTGTATGGGAAAGATTTTG
GTgtgtaaagaaagaaaatatataaagtGTATGCAGTCAATTTTGGGCTG
AATTTTATTTCGATGGGAAAAGATATCATACTGGTTTGTGGAGAGTTTGT
TATGAAAAAGCAGACGAATGCGACTCATTTAACACGTGGTTAGACGAAGG
CGAAAAAATTCCGAGTTGGCTATCCGAAATACGTATATTAATTTGTTTGG
CTTCTATATTAGCAGGAATTGCTTTACTAACATCTTTACTTGgcatttta
tatttgaaaataaaatctgttTACACATCTGTAATCAACTTTATATCTTG
CGCGCTTCTTGTTGgagtttgtttaattttttacgaaagtaaatattttc
ataatgaaCGACAGTTGTTACGAGTCAGACATCTATGGGCTTTTTACTTA
ACCATCAGTACGGCCGGTTGGACTTTTTTGATGGCAGTTTTTGGGATTAT
GGCGGACtattgctgttgttgttgtaaaAAAGACAGGACTTTGGAAGTAA
ATTATGGTGATATGGATATATACGATCCCGAGCATGTATGATATTTAAAA
TCTTGCTGTAAATAtttcacatactttattatgaCTAAAAACCAtaaata
ttatattttcttCCTGCTATGAAAAATCTCTGAAAAGCTCATCCACCCGT
AC Run BLAST on NCBI transcript from alignment at sc0000093:515375..516353+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009378 ID=TCONS_00009378|Name=TCONS_00009378|organism=Clytia hemisphaerica|type=transcript|length=979bp|location=Sequence derived from alignment at sc0000093:515375..516353+ (Clytia hemisphaerica)
ATATCAAGATTAAAACAGACAGATGGCGCGTGTGTATGGGAAAGATTTTG
GTgtgtaaagaaagaaaatatataaagtGGTGAGATTATATATTCGAACG
ATCGAATTCTTTGTTGTctttatttataaatcataacaaaagagaagaaa
aaagtgTTCGATTTTGTTGGCGTCAATTTTGTTTCATTGAttcttttttt
tgagaaatcacGCGAGGgaaaggaatttttttcaacattcgaAGGAAGGA
TAAAGTTATTGATAGAGTTGCGAGGACCTTTCTAATGCAATGGTACTGGA
AAGGACTTTAATATTTTTTGGCTCAATGATATCAGTATCATGTTTAACAT
TTGCAGTATGCAGTCAATTTTGGGCTGAATTTTATTTCGATGGGAAAAGA
TATCATACTGGTTTGTGGAGAGTTTGTTATGAAAAAGCAGACGAATGCGA
CTCATTTAACACGTGGTTAGACGAAGGCGAAAAAATTCCGAGTTGGCTAT
CCGAAATACGTATATTAATTTGTTTGGCTTCTATATTAGCAGGAATTGCT
TTACTAACATCTTTACTTGgcattttatatttgaaaataaaatctgttTA
CACATCTGTAATCAACTTTATATCTTGCGCGCTTCTTGTTGgagtttgtt
taattttttacgaaagtaaatattttcataatgaaCGACAGTTGTTACGA
GTCAGACATCTATGGGCTTTTTACTTAACCATCAGTACGGCCGGTTGGAC
TTTTTTGATGGCAGTTTTTGGGATTATGGCGGACtattgctgttgttgtt
gtaaaAAAGACAGGACTTTGGAAGTAAATTATGGTGATATGGATATATAC
GATCCCGAGCATGTATGATATTTAAAATCTTGCTGTAAATAtttcacata
ctttattatgaCTAAAAACCAtaaatattatattttcttCCTGCTATGAA
AAATCTCTGAAAAGCTCATCCACCCGTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009378-exon-sc0000093-1491911889:515375..515453 | TCONS_00009378-exon-sc0000093-1491911889:515375..515453 | Clytia hemisphaerica | exon |
| TCONS_00009378-exon-sc0000093-1510915933:515375..515453 | TCONS_00009378-exon-sc0000093-1510915933:515375..515453 | Clytia hemisphaerica | exon |
| TCONS_00009378-exon-sc0000093-1575043694:515375..515453 | TCONS_00009378-exon-sc0000093-1575043694:515375..515453 | Clytia hemisphaerica | exon |
| TCONS_00009378-exon-sc0000093-1491911889:515731..516353 | TCONS_00009378-exon-sc0000093-1491911889:515731..516353 | Clytia hemisphaerica | exon |
| TCONS_00009378-exon-sc0000093-1510915933:515731..516353 | TCONS_00009378-exon-sc0000093-1510915933:515731..516353 | Clytia hemisphaerica | exon |
| TCONS_00009378-exon-sc0000093-1575043694:515731..516353 | TCONS_00009378-exon-sc0000093-1575043694:515731..516353 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000093 | supercontig | sc0000093:515375..516353 + |
Blast
The following BLAST results are available for this feature:
|
