TCONS_00009361 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009361
Unique NameTCONS_00009361
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1744

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009361 ID=TCONS_00009361|Name=TCONS_00009361|organism=Clytia hemisphaerica|type=transcript|length=1744bp
AAAATCTACAGTTAGGTTAAAATAAAATTCGAGCGGGAAAGCATTTTTAA
TGAATGCGGTTTGGAAAGCTTGGACGAAAATCAAACTTTCACAAATcatt
atcaaaaatcatcatttttacaGATACTTCATCAGTTCTACCTGCAATAT
GGGTATTCATGGACTTACAAAACTCCTTGCTGATAATGCACCGTCTGcaa
tgaaagaaaatgaaatgaagAATTATTTTGGTCGTAAGATTGCCATTGAT
GCGTCCATGTCTATTTATCAATTCTTGATTGCTGTACGTGCAGAAGGAAG
TCAGTTGACTAATGAAGCTGGAGAAACTACTAGTCATTTGATGGGGCTAT
TTTACCGAACCATCAGGATGTTGGATAATGGGATCAAACCAGTTTATGTT
TTTGATGGCAAGCCACCATCCCTAAAATCTGGAGAGCTTGCCAAGCGTAC
TGAGAGAAGAGAAGAAGCACAAAAACAATTAGATGCAGCCACTGAAGCTG
GTGATCAAGAAAATGTGGACAAATTTACTAGACGATTGgtCAAAGTTACT
CCACAGCACAACAAAGAGTGTAAAGAACTTCTGACGTATATGGGAATACC
ATACGTAGATGCACCCTGTGAAGCAGAAGCTCAATGTGCTGAACTTGTGA
AAGGTGACAAGGTCTATGCTATGGGTTCTGAAGATATGGACTCGTTGACG
TTCGGAACCAATATCTTGTTGCGTCATCTCACTTTTAGTGAAGCAAGGAA
GATGCCAATCCAAGAATTTCACTACGACAAAGTCATTAACGAGCTTGAAT
TCACGAAAGAGCAGtttgtGGACCTATGTATATTACTTGGTTGTGATTAT
TGCGAATCCATCAAAGgtGTTGGTCCTGTTACAGCGATGAAGTTAATCCG
TGAACATAAATCCATTGAAGGTGTCTTAAAACATCTAGAGACTGGAAACA
AGAAATATCAAATCCCAGAGAACTGGCTCTTcaagGAAGCAAGACAACTG
TTTATAGAGCCAGAAGTTAAATCGGCAAAAGAAGTTGAGTTGAAATGGAC
GAAACCTGATGAAGACAAACTGGTAGAGTTCATGTGCAAAAAAAATGGTT
TCAGTGAAGAGCGTATCCGTAACGGGGCAAagaagattttgaaagccaaa
cAATCTTCAACGCAAGGACGAATGGATAGTTTCTTTAAAGTCATTCCATC
CAACAAACCAGCCGTCAAACGAAAGAGCGAAGATAACAAAAAGACACCGG
CATCTAAGAAGAAGGCTAAACCAGGTGGTAAATTCAAAGGAAAGTAAAAA
GTTGCACAGGtttgacaaaaatgaaaaatggaacaAAAAGTTTATACGGT
CAACATTTGCACTCGTAAGTGATTGTATTCATTCGTTTATTTCACTCTTT
TGGGACCATTATGTAACTGCATGACATACGACACTTGGGAATATTCACAC
CGTTCAGTTTGAAGAGTATTGCTGTATTGGGAACCTTGTTGGTCGAATGT
TTTGataccaaaaaaaataaagtactCAATATTTTAAAGACAAAAGCAAA
AGTAGTTGCATTATTTTAGTGACCTTATTAACTAAACTAAAgactttttc
aatattttttgtaaatataggcttttaaaaaatctttacttTGTGGAATA
AAACCTCGTCACATTCAAGCTATCATTTCAAATTGACTAGTTGTATATCC
TTCATCTTTAACATCAGATCCTGTCGTTTTCAGACAAGGCTCGG
Run BLAST on NCBI

transcript from alignment at sc0000093:404551..420452+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009361 ID=TCONS_00009361|Name=TCONS_00009361|organism=Clytia hemisphaerica|type=transcript|length=15902bp|location=Sequence derived from alignment at sc0000093:404551..420452+ (Clytia hemisphaerica)
AAAATCTACAGTTAGGTTAAAATAAAATTCGAGCGGGAAAGCATTTTTAA
TGAATGCGGTTTGGAAAGCTTGGACGAAAATCAAACTTTCACAAATcatt
atcaaaaatcatcatttttacaGATACTTCATCAGTTCTACCTGCAATAT
GGGTATTCATGGACTTACAAAACTCCTTGCTGATAATGCACCGTCTGcaa
tgaaagaaaatgaaatgaagAATTATTTTGGTAAGTTAAGTTCATCAACA
GtagtcagtcagtcaggattaAAACCGCCTAATAAGGggacccgtccata
ttcatttgacaacgtaTTTGACAATCTGAAACCCCCCACCTCCCACAGAT
AACATGGTCAAGTGATGTGCGTGATGTATATACCAAAAgtttagccattt
tttcatcaaaattttctgtTCCGTCGCAAAGTTAAGTCCGTACGTACTTG
GTTGTAGGTCGTGGCTTCTTctcaaagacgaaagacagatctggacttat
ttcttactttccagtctcttgttcgtagtttttctgactttctggttcct
tgtgagttattttctaccgtgagtggtcctaaatcagacagccctgccta
aatccgatggggtcttcacgtgcgtttggtttgggaacgcgaaacacgaa
cgaaaaccacccatgtctaaacttttcaatatatctccagaactaacaga
ttttttgaaattctgtaaaaaggtctaagttcctgaatagttttactatg
ttctataaaaaaatcataagcatcagtcaaatactcgttcatctatttaa
gattgaagacaaaaatttgcgaagaaaaataaacctttagcacaaaaaat
gcttttttaaacacttttttccactgaaaaacaaataacttttacagact
taccttccccaaacattgaagaagcctctactaattaaaataaatgagat
aagataagataaaaccttaaaatcaaccagaatttacaacctttcatCCA
AAGTAAAAGACGTGCATTTctcgccgccattttgtttttgaatgagaatt
ctagagaattccattcgtttccagctcccgcggtcttttttcatccaatc
agatcgcacgatttcactttcgctttctctagtcgaataagactgcggga
tttgagtcatgtgacatctctattgaaaaacccgcgcaaaatacaggggg
tcaaaaatagaaatacagggggtcacactactggctacaggaactgaaag
caagcaattaaggccaatatttttggtttttctgaaggacaaaaggtata
ggaagctttactgaaagagggataaggctgggacaatctatttaaaagat
atggatgtaaaaaaggcacttttttgggtgataattgagattttacttag
aaactttaattctcttacccccgtctcggccccccctgatatgagcaagg
gaaccatgatggccacccctactgaaaatttcagatcaaaacaaacaagg
aattaattcctgtaacgaagaaaattggaaaaagctgggttttgactgtt
tttgatcctaaagtgctattttttggtaaaagctatgcaatttatgtttg
gatttctagaaagcttacccattcattgttaatacattttttaTTTGAAA
GTAATCTCTTCATGGAATAAAAAGATATAGTCAAATCTTGTATggtcatt
tttaaaattttttttgccaaattcgattttcgcatttctccattttaccc
tacgcaaacgcacgtgctttcaaagatacaaactaaaataaaaacaaacc
ttttgcgtgacacaatgaagataccaaagtgtcaactaaactgagagatt
tgatacactgaaccaattgaaccaaaacattaattgcttcttatacaaAA
CATAATTTTTTATTACAAAATTGTAACGTTTAAAACACaagcaacggatt
cagaattatagaggtaattatttttacaactcactcttttttaataacat
taattgacatcttaaCATTATaatcatcttgttagatgttttgtttcaag
actTCTTGAAATATAGTTTATTATCCTGAATTACTTAATTAGTAAAGGCC
TTCCTAATAAATTAATAAAcataaattttgcaaaaaatacaaaagtctaa
gcttaaactcctatatctggattagtcttacctcttttatctttgccttt
acaacaatacaatactgacaagttgacacaacaccaTGATTTCAgccccc
cttaaaataaggggggacaaaattttaaggagaaatttctgaaatttatg
TTTAAGGggaccaaagaaaaataaattttaaatttagggTGGGTAATTTT
TTACTTAAATATACCGTTTAAGGGGGTAAACTGAGggtgaaaaattggaa
atttctttgtcgcccaaccatggtgggagCTCATAACcctaatttttgta
ttttccctgatacaaacaaagaaaaaatttatatggctgaagaaaaaata
atcaattgacttttttaaccaatcaatttcaaaatgtttgacacttgatc
caatcgtttgcttatctttcttgcatggtcgtcatttgaatttcagtatt
caatgcttataaaatactgttgttataagggtattaaactcctcactaag
agggaacagatcatagattcgaattgaacgtgtaattactaatagcaatt
agcattacataacgcgtcgatatctcttcactcccatgaaatgtgattca
aaattaaagtgatgagcacaaaaacaaaatcaagaattagAAAATTTGAC
ACCCAGCGGGATCGAACTTGGAAACCCATGCTTATGAGACAGACGctcta
accgcttgagctaaccacgcttggagAGTGTGAGGGAAAGCTTGAactta
tgagaaagaaaaaggaaagaaacaaacaagaagaaaatttcCTGCTTTCA
TGTTAcccgaaacaaaaggatcagtcacgccgacattcctttccacacgt
cagtaatctagtttttataagtataaaaactagattgtaaggttgattct
aaaaaagaatagccgtTTTTTTAGACGACGACGTTAAAAACAGAACAAGA
TTTTTTAAGGGAGGATTAGGAAATAAGGGCACAGTACATATATGGAATTC
TAAATTTAGGGGGGAGAAATGGATAAGGGGTAATTTGCTGTTTAAGGGGG
GACTGGAAAACATATGGATAAAACCAtgcaacacattgacaagtaatcct
tGTGAGAGAAGTTCATACCAAAATcagcaacaaaaacgaaagtgttctct
tctactgattgcttcctggTGCTCCgtcgcagctgtttatcaaatttcca
ccaatgaggttgctgcATTTCAAACAGCCCTTCTTTTTGACAcctgtggc
ctctcagtgccttgcacaacGGACGGATgatttgaagaattggtgcaaaa
aagtgaaacataaaaaagtttcatttttcattgcatttaatcgaaatggg
ggatttggaaaattttctgttttgtttttcgcacaaacccctgtaactat
tggcgagcaccccgttgctaagatgttagCTTGAAATCGAACCAAATTTC
ATTCTTGATATTCAAACTCCAAATTtagaaaaacgaggaaataagctaaa
ttctcaatacatttcgaccatgattgtagtgtctggatgatttttaaata
tttctctttTGGGGCCAACCTTGGTTTTTTCAATAACAGGGCTCTCTATA
AGCTAAAATTTGCCTTATGTACGTTTTTCTGATTCTTAGTTATATTGTTC
CTACATTTCAGTCTgttattttctatttatttttctacCCTTGAAAAGAC
GCTTTTTGCATCTTGAAAATCATAAACTTTCCCTATTGTCCAACCATAGC
GAACTACATTTTAGATTGCTGCCTTAACTAATTAATAAATTCTAAGTGAA
ATGATTTCTACTTATGTTTGTGTCATTGAGGCAATTTTCATCAGCATAAT
TTGCAAAAAGAGACTTGTTGACGCTGTTGTATGAGTGTTGTATACAGTAT
ATATCTAAATTAGCTAGAAAATTTAGGGAAGCTAAGGTAAAATTGTTAAT
CGATTTTCCATCATGTCTACATCACTGTTCTTAGGTACGAGAAACACGGG
GATTTCGTTGATTAATATCTCTACTGTTTagcatgtttttcatgtttttc
caaTTGAAATTGGTattatttagcatttttttctgctatttttggcattt
tttcatgcatgttttttcaaaaatgccagTGGGATCTCTGAATGAAACAA
TTTATGAAAATTATCACTTTGGCGTTgatttcatgcatttttcatgaatt
tttgtttctctgatttccaaattatttttcaactacccgaagtcctggtc
tttttccacTAGAAAAGTGTGcactaatttttttcttatcattgttttaa
TGCTGGATAATTTATCAACATTACATCCTGATTAGGAAAAAGTATATAAT
ATGAACTGAACTGATCGAACCTCAATTGAACTTGGATAGAACCataacca
aaaatttttttcttgaaaatctaaaatctttcgAATAATTGGGACTTGCC
AGAGATAAAATTTTTCATGTGGGAGAAGTCCTTGGAATTTGACTCAATGT
GGGAGAGTTGGCAGCTTAAAAGTATCCAAAACTACAATCCAACAACCAAC
ATGccatacttttcaaaaaatataaagttattATTTGTGAAATATCCTAT
GAAGCCTAACTACTCaactcaactactttttgccttttaACAATTTTGAC
GATGGAGTGCCATCATTTAAATCAGAAAGCAAAAGAGAGTATACGACAGA
TAACAGATTTTTCTGGCTagccattttctcaattttaggaaaatctactg
tttatagaatgaagttgatataaactttgtGCAATTGTAAGAAGTCTAGG
TCATAAGTGACTTAttttcaaagcacaaaatgaagtTTCTGACATCAaca
aatgaaaagttcattttttcttcttcatttaaaaaaaatgtaaatttatt
ttctcgAGGATagcagttctctgaattatctttCAACGTTATATATACAA
tttctgaattgaaagattttttttacacaaaaagggaattttttagtcgc
atttttttaggaatcctttcttttttttataagaaaacaggGTATCTGTG
ACCTATGTGTATAATTGTataacgcttcattcaaaatacaTAATGCTATA
GGCGTTATGTTTCGTGCGTCTTCGTAGTATAATGTTCAAATATCATGcga
aattttcaactttaaaaTATTCTGCAACTCAAAAAGCCAAaagcttttct
attttttcgttgaaaaaagtgttaattttttcgttgaaaaaagtgttaaa
aaggCAATTTCTTTGCTTAAGGTCTTAATTATCTTCATGAATTTATATCT
TTCAGCTTGAATTAAAGATACTGTAAAAAGTTTGGGGCTACCCCATATAA
ATTAACGTATAATAAAGTTATTGAATATTTGACAATgaagagaaaaatta
ttttatatccTATGATACAAAAAATCTGATATTTTAAAGAGGATTTTaat
ataaagaataaaaaggaCTTAAtacctttccaaatttcctgAAGTAAATA
ATTATGCATATAAGCAAGTTCAGGATGTGTGAAGAAGTCTGTNTTTCCTG
AAGTAAATAATTATGCATATAAGCAAGTTTAGGATGTGTGAAGAAGTCTG
TGATGATAGATATTCGAAAGTACACAAATTCGACAAGTTTGGTAGCACCC
CTCGGAAAAACATTTGGCCATAAAACAAGATGTGataaacaaaaatcttt
tgtgtGTGTGTGAAACCATTCTTCATTCTTAAGATGTTTTTTATAACTGA
CAAGAAGTATNGTGTGAAACCATTCTGCATTATTAAGATGTTTTTTATAA
CTGACAAGAAGTATAGTTGCTAGATGGCAAATTGCAACAGTTTTTAAAGT
CAGCGAATTCCCATTGGTATAGTATTCTGCTAGGAAAAGAACAATCGAAA
CAAATGCATATAGTTTTACCAGTATGTTTCTGCTGTAAACAGTTTCTACT
ATTAAATCTTTTAATGAGTGGAAGAGAAGAAACTCGATGTAAACCCCAAA
TAGAATAAACCATCGAGCCAATCGAGGTAAACTACGtgctaaaatataaa
ataacagCCAATAAACTGATCTTTTACCATATTTATCATATTCTTGTTTT
GCCCAAAGTAGGTGTTGCTCTAGATTTTGTTTTACATCGGGATCTGTTGG
AAatacttgaaaatgaaaatttctcaTTACCTCCATATTTCTACCATTTG
CCTGACCAACTCTCCACTCCATTGCAATGTGTTTGAATAGCTTTGCCATC
CTGTTAAGATATTCTGTTTGATAGCCATCTAATAAATTCATACCAGTTAA
AAAGAAACAGGTCAATTCTCTTCTTTTAAATGCATATgataattctaaaa
ataagTCACACATAACTTCAATAAAGGCactctttttttttagttttttc
cattttttgcagctagttttttccaatttataAAGCATCATCGTTTTTAA
AAGGTATGATGAAATTTCTTTTCCATGTTTATTTGTACTGCAGTACTTGA
CAGTTCCATAGAAAATGAGCTTTGCTAGAAGGTAACATTTTCTTTGGAAG
ATACTCGTGTGTTTCATTAAAATTATTTCtgcttgagaaaatgaaatCCG
CCAGTCAGACCCGCCGTCTTGATAAGATTTAGCTACAACGTAGCAACCAT
CAGAATATATTTGATGAACTACTTCTTTGCTGGGCCAAAATCGTTTCCGC
TTAAACCATTCTAAACATTCTGTAGGCCAAGACTTTACATGAATGCTAGG
GACCAGATCTATATCTCTTAATACGTATGCgtcaaaatatgaaatatcat
GACTTGTGAAGTTTCCTCTAACATCAAATATTCCATATTCTTTTAATACT
TCGCGAAAGGTATTATTTTTATCCTGATGATATTCCAAATTAAACTGGTA
TGCTTGCGATGGTGTATTTCCTTCTATTGTGGAGGTGAGATTTGGAGAAA
AAGGAACCTGGGTCCATTTTTTCTGAACAATGTCACATGGAAGGATCAGT
TTATCAAATGGATTCTGCCATTCATCACAATTACCTTCAACATTGTAAAA
CCCTACATGATTTGTCGGTAATAAAGAGGCATTATAGTAGTTTTCAATCA
CATGCATTTTGTCAATTTCTAACCTTCCACTTGGTCCAACAAGGCGGCAT
ATAAATGCCCCCTCTACCATACTTCCTGATAATAAGAATTTAGAATTATC
AAACATCTGAATTGTTGAATAATGGTACTCCATTGCAAGTTGGTCTTGTT
GATATAATTTTGAAAGATACTTATTCAGTGTTTCGTTAGATTTATCCATC
TTTATTGTGTTCTaataaaacaaacagaaaattaAAACCTTTTCATGAAT
CTTTCAAAGATTCAAAGTAAGTGTACAAGTTTAAGCTGAGACTTCTATAA
ACTCTGAAACAtcatttacaaaaaataaatttttcaataataaaACCTTA
GAAAATGAATGATTATAATGAATTCGAAAATAGCACGTGGAGAAGTACGA
ACGTGTGAAACCAATAAAGCGAACCATTCTTCTTTGACAGGGTGTATTAA
ATCATAACGatgacaaattttgaattttaaacacAAACACTTATAAAACT
CCCAATAGGTTCTCGTTGTGCTTGTATTCTTGAACTCCTCAGAATTTTGT
CTTTTAAATAAGGTGATTTGAGGTTATTTACTTTCTATCATGTGATTTAG
TTTATTATGAGAATCAAAATTGATGGAGCAgcagtgtttttattttattc
ccaTACTCTAAAAAATGGTTAATTACAAAGATTAATTCATTCATTAATCA
TTGATAATTAGCTTCAAAAAACACAGCCAGAATTCCTTACAAAACATACA
AATTGAGCTATTATATCAATGTATTTTATTGTAGAACGTATACTAACAAC
ACGTCATAAAATCCCACTAACAACCAGTATATGTAATGTATGATGTGATT
TTGATCATTCCCGACAGTGTTGGAAAGTACAGTAATTCGATTGGAATTCC
CCCTTAGAAGGCTCGAgggtattttttaatgttttttttatatgtgAATA
CCATTAATGTCAGCATTACATTtggattttgttttgaaatacatattttt
aaagCAGAATTAGTTTATTGATTAAGTCCTAAACTTTATCGAGAAGCCAA
CTCGATAGCTTACGATACCTAAggaaatacactctttttttctcAGAGGC
TTCCCTGAGATAACTAGAACTTGAAAACAAGAGAACAACCAAAATGTTTG
TAAAAGAGGTACTTTATTACCTTCGTTCTATGACCCAGTGGGATCCGTGT
ATCCACCTTACTGGCCACCGTAATGGGTTTTTTGACCCAACTAGAAAAAA
TTACTCATCACATTTTGTTGATGATGAGCTAATTGATTTTGAAGGGCTCA
GTAAAATTTCACACAAAATAGgtcaattgaaatttttcaacgtTTGTGTG
ATCCCACACTTAATGATAttccagaaaatatttttcattaggGTGCAGAG
ACAATGTGTATTTGTATGAGTGCGTTTACTTTGTTTAGGTCGTAAGATTG
CCATTGATGCGTCCATGTCTATTTATCAATTCTTGATTGCTGTACGTGCA
GAAGGAAGTCAGTTGACTAATGAAGCTGGAGAAACTACTAGGTATGGTTT
GATTGATAATgatattttgattgaaaataatataaaccaAAGAAGCATTG
TTGTACTTACATCGCTGCCATTTCcctgattttttttccaaaagtctCTA
TAATCTATATTGTTCAATTTATTTATCATGGATATGGGAAAGTGTTACTG
TTAGACTAATTTAGAGTAATTTTCGTAAACacatatttgagaaaaatact
AAGTTTGCAACTGTCTGGTCTGCCCTTCTATCAGTATGTATTTGTCAATG
TGCAAGGTCACTATGGAATTTCACAAAAGCATTCTCATGAAAAGCAAATA
ATTCTGATTTGTTTCCAAGATGATCACCTCTATCATTTTAATAAATTTGT
TCAAAACCTCAATGTACCATCTCAGATCGAATTTTATTATTTCTCTAGTC
ATTTGATGGGGCTATTTTACCGAACCATCAGGATGTTGGATAATGGGATC
AAACCAGTTTATGTTTTTGATGGCAAGCCACCATCCCTAAAATCTGGAGA
GGTTtgttaagaattttttatttgatgcaGTGGAGTGTCTTTGACACGAA
ACTAATCAACTTGACTGTCTTCTATTAACTTGAACAAGTTAACAATGCCT
CATAAACCTTACCCCATAACTTGAAATTCCCTTAacttaaacaaaaattt
tctccgtgtGTGTTCGAGCTATGGAGATTCCACTGTTAAATAATAATTCA
TGTAGGCTCCATTTAAATCTTTACAAAATTATAATATAGCATTTTAACAA
GGAAGTCAGTTGAATCTCTTTCCCCTCCTCCCTAAAGAAAAGTGTCTCGT
AATTCACAAACAAATTTACCTCTTCTAGTTCACCCTCCTTACCACAATTC
CCTTTGTCTCAAATTTTTACCAGctctaaaatttccaaattacTGGTAAT
GAAAACTTAGAACAGTTTTTTAAAGCAACACTGTAGTGTCTTCACCGATT
TTTAAAATGTGCTCTACTCATCAAGCTTAAAGCCCCAAAAAGGCTAGATG
TGAAACATTAGGATGTGGAATGAAGCCGATTAATTCCCATCTGAAATGCA
TCCAGGGTGGTTTCACATAAATGCTGGATTGAGAGATATACATTGcctaa
ttttgaaaatatgtcgCCTGAGAAGAAAGAAAGCGTTAGACTGAAACCAT
GTTCCAAAGATTTCACTTTCTCTTGATtatgaaagaatgaaaattcCACT
CTAGCCGTTTAAACTCAatgctgtttttttttggtaCTTTCTTTATAGCT
TGCCAAGCGTACTGAGAGAAGAGAAGAAGCACAAAAACAATTAGATGCAG
CCACTGAAGCTGGTTAGTCAAATTACATTATTTCTTCCACAACATGCGGG
AAAATAGATCCATCCACTGTTCAAATGGCGCAAGGTTTCCCAAGATCTCA
ATATTATAAAGCCTTTTGTACTTTTTACATCTAGAGTAAGCCAGACCCAA
AGgggaaattttataattttagtCATATTTATGCAAGATCTTAGCTTTAC
GATCGGCGATATTGCGCACTCTTTTGAATCTAAATCAAATCAATTCTTCT
GAATCTAATTCACATTGTCAGTTCATTGGTTAAGCAATTCCGACTTTGTT
CTGCTTTGTCGTGTTATAACATGTTTTGTCCATAGACAGTGTGAAATTCT
ATTATTTCTTTCTGCAGGTGATCAAGAAAATGTGGACAAATTTACTAGAC
GATTGGTGAGATTTTTAccttattaaaagaaaatagcCAGCTCTTGACCG
GATGAGAACAATGGTCCATGGCTTGAAGGAAACCTCATGTCAATTAATTA
AAATTCTGAATTTTTCCTCAAATTAAAATGACGGATCTATTTTTAACTTC
TTAACTGTCTAATCATTAATCCAAAAAATGTAAGTACATATTGGCAGGAT
TGGACATTCTCTTGTCTTCTCTTCTTCTGTCTATTGGAGTGATGTTAATC
ATTAtcactttttgaaagttttttttttgttttaggtCAAAGTTACTCCA
CAGCACAACAAAGAGTGTAAAGAACTTCTGACGTATATGGGAATACCATA
CGTAGATGTAAGAATTATTCTATTCATAAAATATGCACCATTTTGATGTC
TTCGAGCATTTAGATCATAGGTCCAACAGCTGATTGATTGTTAGTGACGT
TAAATCAGTCAACTTGCAAACAGTAAGCTGTTGGGTCAATGATGCAAAGT
CCAGGAGACGTTTTTATGATGCATCTTGTGAATGTTTAGAAAATTGCTCT
CTTTTTCCTAAACCTCCTGGGACAAGAATCCCTTTTATGGCTTTGTAATG
GTTAGGTGTTTAGTGTAGTTtccttttttcgaaaatttgcgaTTTAACCA
TCGTACAATTAGGCGCAATGACAAAACTACTCGCTCTATTTTTaacaatt
tgaattattttgttCCTAATCTCTTTTCAGGCACCCTGTGAAGCAGAAGC
TCAATGTGCTGAACTTGTGAAAGGTGACAAGGTATAGATAGGCTCCATTA
TCTTCTTCTCCTTTATCCTCTccattctttgtttattttcaaaagcGTTT
TTCTACTGTCAAGAAGCTTTTGCATTGACATTGAAATTTGACAGGGCTTG
ACATTGTTAAATAAGTAACTTCTATCTTAAAATGTTATGTCCTATTACAA
AActcctggaaaaaaatatattgaaacaTGCAAGCCTAAGCTTCAAACGA
ATGAAGAGCCTTTTCATTTGATTCCCATAAGTATTTACGCTATCTCATAA
ATTTTACTGCTGAAAAGCAAGTTATTTTTTGTCTCCTTATTTTGTAGGTC
TATGCTATGGGTTCTGAAGATATGGACTCGTTGACGTTCGGAACCAATAT
CTTGTTGCGTCATCTCACTTTTAGTGAAGCAAGGTACTGATTGGCTTTCA
TATACATCATATTCCTTCACACATTAGATAGGCTAACTGATTACAGATTT
CTCGATAAAGTTTGCCCAGTTTTGAAGTCGACTAGCCCGGCATGTTGTCT
TCTATTTACGTTTTAGATTTCTGAATATTTCATGGCGCATATCATTTACC
ATATAACTTCCAATAAACTTCCACTTCTTTTTGTGGCCTTCCTCCAATAA
ACGCCCCATCTTTgaggagaaattttcaataaacgcccctttCGAATAAA
CTACTCGAGGGGCTTATATTTAAAACAAGTAGCTGTAATGAAGTAAAGGT
AAACTTAGATNCGAATAAACTACTCCCCTCTAGGAGGAGGGGCTTGCTTA
TATTTAAAACAAGTAGCTGTAATGAAGTAAAGGTAAACTTAGATATGATA
ATAGTTTGAGGAGATTGAGTAACTTCGTACTACAATGGCTGGTCGTAggt
tattgtttgtttttcaTGATGATGATGAGTCGTCTAACCTACAAGATTAA
TCTTTTCCTCTCTTATAGGAAGATGCCAATCCAAGAATTTCACTACGACA
AAGTCATTAACGAGCTTGAATTCACGAAAGAGCAGGTACCATGGGGCACC
GACAATAGTTGGTTCTATTTCTTGTGTATCACGTGTTCTTTAGAAGATGA
CTGAAACATTTGctgtttttttgctattttttgctgttttttgctgtttt
ttgacCAAAATGATTCCCTTTTAGAAGTTGTAACTTTAACGCAacttata
gaaaaaataaataaattaaaattgtttCGAATCGGAAGATATAACTAATC
TCTTGGTTCGGTCACCTGTCTGGTTGGTATTAaacagaccagaatgtaaa
tTTTGCGCCAATCATGTGTGGGCCAGTTGGCTATTTTGGTTTTACTAAAT
TTTGTTTCCTGGAGGCTGGTTTTTCAAATGAATGTGACTGGTAACACACT
TGTAGCAAATAGACTTTCGATTTTATATTctcaaaactttttcttttagt
ttgtGGACCTATGTATATTACTTGGTTGTGATTATTGCGAATCCATCAAA
GGTGTGTAAAACGTACTATTTTCATTCTACCTCTGATGACATCAAGTGTG
ACAACCGCCAGTGCCACGAGAATATTAGGCCCGACCAAATGCCAATGGAA
ACCTTGTTTTGAATTCGTATCATTTTCACATTAGAGTGTATTTGATTAAT
TCTCGATTTCGTCAATAAATTTAGGGGAGAAGTCAcaatgaacccccccc
cccagtctAAACCTTTTGAAAGGAACTAAGCCAGAGGAGACAAGTCTTTT
CTCAAatgatttcatttcattttttttcttttcaaaggtGTTGGTCCTGT
TACAGCGATGAAGTTAATCCGTGAACATAAATCCATTGAAGGTGTCTTAA
AACATCTAGAGACTGGAAACAAGGTAATTGTCTTAATTAGATATTTAACT
ACGATTACTTTATTTCACACAGAAACACCCAACAAGTCCAGAATTTGACC
TCTGTTTTCCTATTTTTAGTAATAGACTGGTCAAATCTCGGATTTTTGGG
GTTTTTATTCGATAGAAAAAATGCCCTAGTCTGACTCGTCTATATCAAGA
ATTACTTTCACAGGCTTCGCATATTATTTAACAAGAAGTAAACTTTAACt
tagatttggaaaattttataaaactaTCTATCAACCACTTTGCTGAAGAA
GTGATTGAACTTCATTAAGAGCCAATGAAAAATTAGCACTGCAAACAAAA
AGTGTCAAGTCTTGATTGtctatttacaaaaaaacatgATGATTATCata
tcaataaaatttttgggtcccttttattaattttgttctTCCTTTCTCTT
TTAGAAATATCAAATCCCAGAGAACTGGCTCTTcaaggtttgaaattttc
cctAGCCCTTTGTTTATTTAATTTCCAAAGACTTATTTCTCAAAGTATAA
ATTGTGAATAAATTGAAGTGGAGCTATTAGCTAGTACCACTCGGCACCCA
CAGTGTGGTTTGCGGTATTTTTGTCAGCGAAGAAGAGTTGCGTACAGGTT
ACATTTCCTTGCTATCCTAATTACATATCCCACGTCTTTGTATCATTATA
TAGGAAGCAAGACAACTGTTTATAGAGCCAGAAGTTAAATCGGCAAAAGA
AGTTGAGGTAAGTTGCTATTGAAGGAATAATAGGAATAGGAATAATTTGA
TGTTTTAGATATCTGTGACGTGACTCATTTTATGGTTCCAAGGCAAACCT
AGACAAACCTTATTTTCTATtaaaacattgcttcattctatttttacctT
TCAAAAACACCTTACCTTTTAGTTGAAATGGACGAAACCTGATGAAGACA
AACTGGTAGAGTTCATGTGCAAAAAAAATGGTTTCAGGTTAGTATTTTTT
AAGTCGAGCCTCTGATTAGTGAACAGTATTGTTGAAAGAAGCTATGTCAT
CCTTTTTTACGAGTATCCGTTATTCAGAGACTTCGATATCAACTGTTTTT
TGTTCCAGTGAAGAGCGTATCCGTAACGGGGCAAagaagattttgaaagc
caaacAATCTTCAACGCAAGGACGAATGGATAGTTTCTTTAAAGTCATTC
CATCCAACAAACCAGCCGTCAAACGAAAGGTAATCAAACTTTCTCAGTAT
TAACATTGAAACGCCTGTAAGATCGTATTTTTTACGATCATTACTTTGCT
TCACAGTGCTATGAAATACAACAATCTTGCTTAGAATGAATATTTGAAGA
GAATCTTAAGTGATTATCTGATTCTTTCGGTCTTGTTCTGGCATTGGGGA
CCTTTAGCATCTAGGACGGCAACTTTGAAAAAGTACGACAggattgaaca
aaaagaaagccCTTTGGGATTGATATATGGATCGCAGTTAGATGGttaga
ttcttttcttttttttcatctgttttcatatcaattttctcatgagaatg
gtgaattttaatttttgataattaatGGAGGTTTTCAAATATCAAGACga
cttcttttttgacgtcgtCCTTTGGGACGAATACGGTAAAGAAAGAGTAC
AATAGTTTTCAATGATATTAAACCCTGAGAATTATAACGTCATTTTGTAC
AACAGCTTGACTAAATTTCAAATGTGTCCATATACTATTAAATCTAGATA
AAATCGgataaaatttgacattttgattttaagatttacttCACGTTCTC
ATTCAAGTCCCCGTCCTAGATGCTAAAGGTCCCCTATTTTTAGACCCAGG
AACGTTGAGAACTAAACCATTCTTTTCTTAACATCGCCCGATCGTACAAA
ACGATACATGTTCATCCCTGTAAGCGCATCATTGTAGATTCGCACCTCTG
TATTGAATGTTATGCAATGTTTTTATCAAGGTTTGCAGACAATGCTCCTG
GAAACCCGTACTAGTAACTAGAATCACTATAGCACGTTATTCTTTTGGGG
GGatactgaaaaatatttgaaaaaggaGAAGCTTATAACAGAACATACCA
GTATGTTTGAGGAGCTAAAATCTTGAAACATTTGGGTCTTATTAACTGGC
TTGACGCATTTTAGATAAGGGGTCCTACGGGCCACCCGATATCTCAAATC
TAATAGGGCAAGGTCGACATATTCCTCAAAGTTTCATTTCGTCTTTGACA
TAATAGATCATATTTCCCGCACAATATTTTTAGAGCGAAGATAACAAAAA
GACACCGGCATCTAAGAAGAAGGCTAAACCAGGTGGTAAATTCAAAGGAA
AGTAAAAAGTTGCACAGGtttgacaaaaatgaaaaatggaacaAAAAGTT
TATACGGTCAACATTTGCACTCGTAAGTGATTGTATTCATTCGTTTATTT
CACTCTTTTGGGACCATTATGTAACTGCATGACATACGACACTTGGGAAT
ATTCACACCGTTCAGTTTGAAGAGTATTGCTGTATTGGGAACCTTGTTGG
TCGAATGTTTTGataccaaaaaaaataaagtactCAATATTTTAAAGACA
AAAGCAAAAGTAGTTGCATTATTTTAGTGACCTTATTAACTAAACTAAAg
actttttcaatattttttgtaaatataggcttttaaaaaatctttacttT
GTGGAATAAAACCTCGTCACATTCAAGCTATCATTTCAAATTGACTAGTT
GTATATCCTTCATCTTTAACATCAGATCCTGTCGTTTTCAGACAAGGCTC
GG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005244XLOC_005244Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009361-exon-sc0000093-1491911889:404551..404780TCONS_00009361-exon-sc0000093-1491911889:404551..404780Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1510915933:404551..404780TCONS_00009361-exon-sc0000093-1510915933:404551..404780Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1575043694:404551..404780TCONS_00009361-exon-sc0000093-1575043694:404551..404780Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1491911889:413239..413341TCONS_00009361-exon-sc0000093-1491911889:413239..413341Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1510915933:413239..413341TCONS_00009361-exon-sc0000093-1510915933:413239..413341Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1575043694:413239..413341TCONS_00009361-exon-sc0000093-1575043694:413239..413341Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1491911889:413749..413851TCONS_00009361-exon-sc0000093-1491911889:413749..413851Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1510915933:413749..413851TCONS_00009361-exon-sc0000093-1510915933:413749..413851Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1575043694:413749..413851TCONS_00009361-exon-sc0000093-1575043694:413749..413851Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1491911889:414599..414662TCONS_00009361-exon-sc0000093-1491911889:414599..414662Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1510915933:414599..414662TCONS_00009361-exon-sc0000093-1510915933:414599..414662Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1575043694:414599..414662TCONS_00009361-exon-sc0000093-1575043694:414599..414662Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1491911889:415018..415055TCONS_00009361-exon-sc0000093-1491911889:415018..415055Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1510915933:415018..415055TCONS_00009361-exon-sc0000093-1510915933:415018..415055Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1575043694:415018..415055TCONS_00009361-exon-sc0000093-1575043694:415018..415055Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1491911889:415336..415407TCONS_00009361-exon-sc0000093-1491911889:415336..415407Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1510915933:415336..415407TCONS_00009361-exon-sc0000093-1510915933:415336..415407Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1575043694:415336..415407TCONS_00009361-exon-sc0000093-1575043694:415336..415407Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1491911889:415781..415831TCONS_00009361-exon-sc0000093-1491911889:415781..415831Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1510915933:415781..415831TCONS_00009361-exon-sc0000093-1510915933:415781..415831Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1575043694:415781..415831TCONS_00009361-exon-sc0000093-1575043694:415781..415831Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1491911889:416148..416233TCONS_00009361-exon-sc0000093-1491911889:416148..416233Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1510915933:416148..416233TCONS_00009361-exon-sc0000093-1510915933:416148..416233Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1575043694:416148..416233TCONS_00009361-exon-sc0000093-1575043694:416148..416233Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1491911889:416769..416835TCONS_00009361-exon-sc0000093-1491911889:416769..416835Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1510915933:416769..416835TCONS_00009361-exon-sc0000093-1510915933:416769..416835Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1575043694:416769..416835TCONS_00009361-exon-sc0000093-1575043694:416769..416835Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1491911889:417250..417301TCONS_00009361-exon-sc0000093-1491911889:417250..417301Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1510915933:417250..417301TCONS_00009361-exon-sc0000093-1510915933:417250..417301Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1575043694:417250..417301TCONS_00009361-exon-sc0000093-1575043694:417250..417301Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1491911889:417588..417673TCONS_00009361-exon-sc0000093-1491911889:417588..417673Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1510915933:417588..417673TCONS_00009361-exon-sc0000093-1510915933:417588..417673Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1575043694:417588..417673TCONS_00009361-exon-sc0000093-1575043694:417588..417673Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1491911889:418105..418137TCONS_00009361-exon-sc0000093-1491911889:418105..418137Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1510915933:418105..418137TCONS_00009361-exon-sc0000093-1510915933:418105..418137Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1575043694:418105..418137TCONS_00009361-exon-sc0000093-1575043694:418105..418137Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1491911889:418354..418407TCONS_00009361-exon-sc0000093-1491911889:418354..418407Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1510915933:418354..418407TCONS_00009361-exon-sc0000093-1510915933:418354..418407Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1575043694:418354..418407TCONS_00009361-exon-sc0000093-1575043694:418354..418407Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1491911889:418573..418637TCONS_00009361-exon-sc0000093-1491911889:418573..418637Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1510915933:418573..418637TCONS_00009361-exon-sc0000093-1510915933:418573..418637Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1575043694:418573..418637TCONS_00009361-exon-sc0000093-1575043694:418573..418637Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1491911889:418759..418879TCONS_00009361-exon-sc0000093-1491911889:418759..418879Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1510915933:418759..418879TCONS_00009361-exon-sc0000093-1510915933:418759..418879Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1575043694:418759..418879TCONS_00009361-exon-sc0000093-1575043694:418759..418879Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1491911889:419934..420452TCONS_00009361-exon-sc0000093-1491911889:419934..420452Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1510915933:419934..420452TCONS_00009361-exon-sc0000093-1510915933:419934..420452Clytia hemisphaericaexon
TCONS_00009361-exon-sc0000093-1575043694:419934..420452TCONS_00009361-exon-sc0000093-1575043694:419934..420452Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000093supercontigsc0000093:404551..420452 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
29.6092	27.866	77.8365	92.5112	7.62415	5.13807	14.0237	17.5592	19.8087	14.856	19.0946	17.0404	14.063	12.4177	11.4132	14.5027	15.6493	22.3932	4.98197	5.58781	15.0843	16.144	19.8363	15.9534	38.6835	39.6592	4.56403	2.29731	8.09625	10.5755
Blast
[Close]
BLAST of TCONS_00009361 vs. Swiss-Prot (Human)
Match: FEN1 (Flap endonuclease 1 OS=Homo sapiens GN=FEN1 PE=1 SV=1)

HSP 1 Score: 486.493 bits (1251), Expect = 9.253e-168
Identity = 236/361 (65.37%), Postives = 293/361 (81.16%), Query Frame = 2 
Query:  149 MGIHGLTKLLADNAPSAMKENEMKNYFGRKIAIDASMSIYQFLIAVRAEGSQLTNEAGETTSHLMGLFYRTIRMLDNGIKPVYVFDGKPPSLKSGELAKRTERREEAQKQLDAATEAGDQENVDKFTRRLVKVTPQHNKECKELLTYMGIPYVDAPCEAEAQCAELVKGDKVYAMGSEDMDSLTFGTNILLRHLTFSEARKMPIQEFHYDKVINELEFTKEQFVDLCILLGCDYCESIKGVGPVTAMKLIREHKSIEGVLKHLETGNKKYQIPENWLFKEARQLFIEPEVKSAKEVELKWTKPDEDKLVEFMCKKNGFSEERIRNGAKKILKAKQSSTQGRMDSFFKVIPSNKPAVKRKSE 1231
            MGI GL KL+AD APSA++EN++K+YFGRK+AIDASMSIYQFLIAVR  G  L NE GETTSHLMG+FYRTIRM++NGIKPVYVFDGKPP LKSGELAKR+ERR EA+KQL  A  AG ++ V+KFT+RLVKVT QHN ECK LL+ MGIPY+DAP EAEA CA LVK  KVYA  +EDMD LTFG+ +L+RHLT SEA+K+PIQEFH  +++ EL   +EQFVDLCILLG DYCESI+G+GP  A+ LI++HKSIE +++ L+    KY +PENWL KEA QLF+EPEV   + VELKW++P+E++L++FMC +  FSEERIR+G K++ K++Q STQGR+D FFKV  S   A +++ E
Sbjct:    1 MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGETTSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAEQEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDMDCLTFGSPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYCESIRGIGPKRAVDLIQKHKSIEEIVRRLDPN--KYPVPENWLHKEAHQLFLEPEVLDPESVELKWSEPNEEELIKFMCGEKQFSEERIRSGVKRLSKSRQGSTQGRLDDFFKVTGSLSSAKRKEPE 359
The following BLAST results are available for this feature:
BLAST of TCONS_00009361 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FEN19.253e-16865.37Flap endonuclease 1 OS=Homo sapiens GN=FEN1 PE=1 S... [more]
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