TCONS_00009198 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009198
Unique NameTCONS_00009198
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1628

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009198 ID=TCONS_00009198|Name=TCONS_00009198|organism=Clytia hemisphaerica|type=transcript|length=1628bp
TAAAAGCATGTCGCGAAGCCCGCCAAGAAATATTATACCAGCTGGTAGAA
ATACAAACAGTAATGACTCTCTTTCAATGCGTCGAAGAGTTTTCATTGGA
AACTTGAACACTGAGAAAACTTCGAAAACAGAAGTTGAAGAAATATTCAA
CAAGTTTGGAGAATTAGAAAGTTGTTCTTTACACAAGAATTTTGGATTTG
TGCAATTTGTTCGTGAAAAAGATGCGGATGCTGCTGTTACAGCGATGCAT
GGCAAGATGATCCTTGGCAAAAGAGTTGATGTCAACTTGGCTGGTTTGCG
TCGAAAGACACAATTGAAAGATAAATATGAAAAACCACCAGACAAAGAAG
AAGTTGTACCAGATGATATGCGCAAATTTAGCGAACAAGCATCACGCAAA
AAAAGGAGGGATAGGTCAAGATCACCACGCAGAGAAGGTCGTGGTGGTGA
TCGAAGAAGATCACTTTCGCCAATGTCAAGATATGAAGAATATCGAAGAG
GTCCTGGGTATCATGACAGACCTTATGAAAGAGACACGGGATATGGTCGT
GCACCGCCTCCATCAGCCGCCGGTGGTTACAACTACCCACCACGTGATCC
ATATGCTTATCACCCTCCAGCACCTCGTGTTGCTCCAAGACCTGCTATTG
ATTGTGAAGTTGTTGCATTGTCGAAGGAAGATAGTCGCTATGCAGAAGAT
GTGGAGAGTCGTTTGCGAAGTATTGGCCTGGTTTGCAATATTGGTTACCC
ACCCATCGATTTATCCACAGTTGAAGTTGTCGATCGAATCGCTCGCTGTG
GTACTCTGTACGCCATTGTTCTCAGCTCTCAAAACGCCACCCATCAATCG
TGCACACTGAATGTTTTACATGGTGCAAGACAAGGTTATTCGAAATGCGT
CAGGAGTTAAATGGATATAAAAAGCATTGTTTTCAAGTCTCAGGAAATGA
CAGAAGTGCTTCGATCAAACACAATTGCAAAGAATGCATCCAGcCCTCGA
AAATCGATTTCAAGTTTTTTGGGTCAAAACGTCACCCGATCGAGGGCAAT
GAAGCCTCGTGCGTCCTGCTCACTCAGATGAAGTCCTGCTTAGTAGGAGT
TAAATATTGTTCCACTTGTTATAAGCCTTTGCTGACAGAATTTATCAAAA
CTCTTTTGGATAATAAGAATTCTATAGAGAGTAGATAATATGACAACCGA
GATTAAATAAAGTAAATTACATGATCCAATCTCGAATAATTCCAAATGTA
TGGTTTTGTTCACCCAAAATGGATATTGGATATTGTTAAGAAAGAACTAC
TTTGGGCGTGCAAACTTTCACGAACAgtaactttcgcgattttcacgagg
cttaaccttttttttgcaaaagttaatGTCTTTCcaactcgcgaaagttt
gtacgccgtAAGTAGTGGTACTCCAATAGACGATATTGAAGTGAGTTTAT
GCACTCTGCTCGGGTTGCTGACCGTTCAAAGACATCCTTGAATGAcagaa
tttttctaaaattcgtGTACTGTGTACTGTACTTCATATATTGAAAGTTC
TGATGGAATCGCTACCTACTCttaagttccaaataaacgccccccttgtt
aattttttaaaaatttccaaccccccgg
Run BLAST on NCBI

transcript from alignment at sc0000091:420631..428873+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009198 ID=TCONS_00009198|Name=TCONS_00009198|organism=Clytia hemisphaerica|type=transcript|length=8243bp|location=Sequence derived from alignment at sc0000091:420631..428873+ (Clytia hemisphaerica)
TAAAAGCATGTCGCGAAGCCCGCCAAGAAATATTATACCAGCTGGTAGAA
ATACAAACAGTAATGACTCTCTTTCAATGCGTCGAAGAGTTTTCATTGGA
AACTTGAACACTGAGAAAACTTCGAAAACAGAAGTTGAAGAAATATTCAA
CAAGTTTGGAGAATTAGAAAGTTGTTCTTTACACAAGAATTTTGGATTTG
TGCAATTTGTTCGTGAAAAAGATGCGGATGCTGCTGTTACAGCGATGCAT
GGCAAGATGATCCTTGGCAAAAGAGTTGGTATGTATTTTTAGAATGTGCT
CCTATACTTCTTTTTCTTTACCATTATCCTAAAGTTGAAAgttcacaatt
tttttaatttttgaatacTAGGCTCCTCAGATGTTTGATAGATTGACTAT
TCTTATCATAATAGCTTCATCCCCCATTCTCTGCCTGCAGGAGCCTTTAG
GAGACggaatttttctgaaatttcataaGGGTACTTTCAACTTCAAAGGG
AAACTGCTAACTCGATTCAATAATTTTTATGTAATTATTAAATCCAAGGG
GGATCTTTTGATCTTGCATTTGTAGGGTACTTAGGTCTCAGGAAAGGGAC
CTAAATTCTTTAGAGTTATGAACCTTTTAAGTTATTTTGTTTCTTTAACA
CTCAACAGCGCCAAATATATGCTAATTTTTTTCTGACCTCTAGATGTCAA
CTTGGCTGGTTTGCGTCGAAAGACACAATTGAAAGATAAATATGAAAAAC
CACCAGACAAAGAAGAAGTTGTACCAGATGATATGCGCAAATTTAGCGAA
CAAGCATCACGCAAAAAAAGGAGGGATAGGTCAAGGTAAGCATTTTTTAA
TAGGTCTCGAATACTCAGTCCATTCTTCATGGTGTGAATCACCTCCAATA
AAGGTAGGAGGGTTAATAATATTTTGTTTAAATGTATCACATCTCTGTCA
TATATGGGTGAATTGCGCCAAATCTGTACCGTGGTTTTGTAAACAAGGCA
AACTGTATTCAAATTATCATTAAAGTGGATGTGTCAGGTATTAGAGCTTT
AGGTATATTTCTTCTTTGTAATATTAGCAAAAATCTGTTATGGACGGGAC
GTCCCGTCCATCACACATATGCCTGTCTTTCTACCAGATTTTTGAAGaca
gtttgttttgttttcaaaaccacGGTACAGATTTGGTGCAATGCACCCAT
ATTGGTTAGCAAAAGTTTTGCCTGCGCTGCCATTTACATCAATCTACTGT
TGAAATTTTTGTGTAGTTAAAAGGTTGATAGACCACCACTGTAAATAGTG
GGAGGTCGTGAAATTTCAAAAAGGGAGGAAACAATATAAATACGGGTGTG
GAGTTCCCTCTAAAGCTTTCTGCATCTATAATAAGTTTGATGACAAATTC
CTTTTTCGATTCACTGCACTCCCTGAATATAAAAATGTTCTCGCAACATA
CTAGTCAGGCCAACATTAGATAAATCGGTAAATAATATACTATTGAAGTT
TTATCAAAACCATGTCCTTTTTCACTCCACCAGATCACCACGCAGAGAAG
GTCGTGGTGGTGATCGAAGAAGATCACTTTCGCCAATGTCAAGATATGAA
GAATATCGAAGAGGTCCTGGGTATCATGACAGGTTAAccattaaaatttg
atacttTTCACAAGGATGAAACTTCTTTTGACggaattaatattttttaa
agtttaatttttcactttttgaacgGACTTTGGAAAACAAATGAGTGGAA
AATATAAGCGGATatttgaatatctttccaacgttACCAATTTTTTTACT
ATATGACGAACACTTGGTAAGTTTCGGTTAAAAATAAATGCACACCTTTT
TGACACAGACTTTAGACGGAAGGAATAACAAGGAATTTATGAATTAAATG
TTCTCTACAGAAGATTATGTTTCTCACACCTTTTCCTTTTTCACAGACCT
TATGAAAGAGACACGGGATATGGTCGTGCACCGCCTCCATCAGCCGCCGG
TGGTTACAACTACCCACCACGTGATCCATATGCTTATCACCCTCCAGCAC
CTCGTGTTGCTCCAAGACCTGCTATTGATTGTGAAGTTGTTGCATTGTCG
AAGGAAGATAGGTATTGCGTCTTGTATTTTTTCTTGGGCGAGATTTCGTT
ATTAGACTGGTTGTATGAAACGGTTGGGTTACTTAGATAAATGTATGCAA
ACAGGTCTGTAGGTGTTTTTTCACTGGAAGACAGTCTTGATATATTGTTG
TACGTgaagaaaattaaagaattcctgtccaactatcttccttcaggaga
tttgggtggcagagcagccaGCATATGCATTTCCTCCTTATTaagactcg
tcagcactgcatactgcaccctggctagGCAGATCGAATTGCCTAGCATC
TCACACCATAAAACTAATTCTGGTGCAGACTGAAATAGATATATAGTGCA
TATTGCATTAGATTGAGCCAAAGTTCAGAGAGTTCCTTAAAACTCGTTGA
TTGTTCCTcacattttaaagattttgagatCAAGGGTTGAAAGTACCTTT
TAGTCATTCAAAACTCATTAAATTTGAACTCGTCAATTCATTCTTTTCAG
TCGCTATGCAGAAGATGTGGAGAGTCGTTTGCGAAGTATTGGCCTGGTTT
GCAATATTGGTTACCCACCCATCGATTTATCCACAGTTGAAGTTGTCGAT
CGAATCGCTCGCTGTGGTACTCTGTACGCCATTGTTCTCAGCTCTCAAAA
CGCCACCCATCAATCGTGCACACTGAATGTTTTACATGGTGCAAGACAAG
GTTTGTTTGTCCATCTTTTTCAGATACTTTCCTCTACTGTTTAAAGCTTT
CGAACTCTCTTGAAGATATTTATATTGAGAAGAGCTTTTAAAATCATGTT
TTAAGCAAGCAGAGTGACTTGTGCTGTCTGacttaaaattgaatattata
ttTCAGGTTTAACAACTTTTCCACGGACATTTTTCTCACCgactttttcg
tttttcttctttttcatttttcactcattttcgATGACCATCAACACCTT
TTTGATGACATGCAGAACACCGTAACATGCCGCTCAAAGATGCACTCTCT
TTTGTGGCTAGAAATTTCGACCAATACCTCAAAGACTTGAGTAGGGAGCC
TCCTCCCCCTTCTTCTTACTACCCTTCATCATATAACTACCCACCCCCTC
CTCGTGCAGATTACGGTAGAGGGTACCCACCAGAACCTGCATACGGAGGC
TATGGTGGGCAACATAGCTACCCACCTCCTCGGCATACGGAACAACCAGC
CTACAGGAGTGAGGAACGGGTAGGTGGTTATGATGATAGGGGAAGTATAA
GTAGTCAGGGGAGCGAAAGGAGCTCAGAGACCAAAAAACTCTCAGCTGAG
GAGCTGAATGAAATGATCGAAAAATTGAAACGTGAGAAAGAACAGTTAGG
TAAGCacaattttcctttcttttgttttgttttactttgatcttgttttt
tatatttgtttgtttttgatatttgatGGCTATGTGAGTGCATGAAATCT
AATACAAATGAGacggagtttttataagatactttaataattggtcagtT
GAAGTAGTAAAgatgatgcgttctttagaaaatttAATATGGAGAAAGTC
ATTCAGGTATTTCTTATTACAATGAATTTGGCtacatttattaattttta
caatttaactTCATTTCTATATTTTCTGTTATTCTTTTAGAAATTGCTGG
CTCCGTTGTAAAACCTGCTACAGAAACACGTGAAAAGTCAGCAGAACCAG
TACCTGCTGCTAATGGCGATCAATAAAAATGAATCCAGAGACAATAAATT
GGCATCATATTTTCTGGAAAGTTTTGAAAGAGtactaaaaaaacttttgc
tcaagacttaaggtggtagtctacccaaaaataaaaaatcatcgaaaaaa
ttgtcgaattctggtttttgggtgttttgagatccttaggtTTTTCTGaa
catcttctgaaaatttcagagctatatctttatcattcaggccgcagtga
gcatttttatcctGTTGGGTGCTTGAAAAATCGCCCTAGCAACAGAAAAA
ATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNTACGccaaaagaaagctctttttacgcccttttcgg
gcgtcaaaatattattttccgtggcattacgtaatccttaaaattaaaga
tggtagctgCAGTAGTGCAACACATCAAAACCAGCTGAAAAGCAAGCTGT
AAGCATGATTCTACAGATTTCTTGGCAAgttttagatcaaaacttaatct
ctttgattgaaatgatttatttaaatGAAGAATGGACTCTACAGAATCTA
TAAAGTTGCTCTACATTGGTTGTGTTGCTGGATTTCTgcgaaaaacattt
aagttgtcggcattttgttttgagcataAGACAATGTGCTTTTCGTGGCT
CACATAATGTTTTGTAGTGGATTTAAATTTaactgagatatttccaagca
caacatgatgtaacagagatagaaatgtgcattataatgaactggaccAA
ACTTCTGGAGACACACATTCTCATCTGACACCAGCCATTCATAACCGCCT
AGGCGGTAACCGAAGCGAAGGCGCCGCCTTCGATCAAGCCAGCTCATTGT
CANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGAGAGTCATGCTGGAAT
TTCAATGAACATTTTGTCACACTTATGTGGctgttttcacccaaatttga
tgttatcgCAAGATTACCGCAAAGTTTGCTATATTGACGTAACTTTAGCG
CAACATGTTTTAGttgatttttggataatttattaatttttgtgaaatgt
tttactttaacttATGAAACCTGACTGGTTTGATGAGTattcagtgaaga
aattttttgaaaagagctttccagcTTAAAATGATNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAACACCTTG
TCAGAAATATCTTAGGATTGAGAGTAGCtacagacttgaaattttcaggg
aagttTCCTTACATGATTGTGCATTGAATGAAtggattaaaaaaatttaa
aattggtttcctgatttttaatctcaaaaaagggtttttttcagtttctt
accccctggaaaaaaattttaattttttttttcactcattccagaccttt
tctaaatattagtcatttaaaaaaaaaactaNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNCTTAAAATTATGATAAAGATTATATGATACACTATTTTTTGAAT
GCCCTTTCAAAAAGGTCTTCATGAAACAAAGAAATGATTTTTACAATATA
AGCTCCGCTTTCAAACTATTTATTACTTATTGCTACTTGAAGCCTGGTAT
CAATGATGTACTATTAAATAAACTAACCAGGTTGGTAAGAATCTTAAGAA
CTGATAAATGGGCTTACAAACGGTTAAAAAATGGTACAAAATATTTAGTT
AAtgccaaattatttttttagtgtTTTGCATACAAAAGGTTCTGGCGTca
gcaaaattgattttgaagttAACCTTTCCTCATCTCATCTCGATCTGTGT
GNTAAACGGTCAAATGGTACAAAATATTTAGTTAAtgccaaattattttt
ttagtgtTTTGCATTCAAAAGGTTCTGgcgtcagcaaaaaattgattttg
aagttAACCTTTCCTCATCTCATCTCGATCTGTGTGACAAATTCAGAGCT
TCTTCGCACAATTATCAAACGATCTAAGAATTCTAGTCATTTGGTGATAA
ACTTCTAATCAGTGattgaatttcttcaaaaatgtaTTCTGTTACTATTC
TCTTCTTATTTTAACAGGATACTAAtggttttttgcgattttttcaattt
tgatggtATGTCTGTTTTCTCGACATGTATgcatttttctggaaatttta
aCCGTTTTTTGGAGTTCTTGCCGTTTTGTTTTTGGTCTGTATGCTAGATA
ATTGCGAAATTGGTAGTCTTCTCAATTTCTTGGACCTGaaatatcttaat
ttttttagcaCAGAAAACAAAGAAGAATTTTATGAATAGAGCCTACTTTC
TAATACTAACAAATGCTTTGTTTCTACCATCAGGTTATTCGAAATGCGTC
AGGAGTTAAATGGATATAAAAAGCATTGTTTTCAAGTCTCAGGAAATGAC
AGAAGTGCTTCGATCAAACACAATTGCAAAGAATGCATCCAGGTAAGGTA
GTCATTGTAGTAAATTAATTATGCCATAATCTTCACAAGCAAACCTTTCG
CTTAATTTACCAGAATAtgaaataaagaagaagaaggtTCTGCTCGTGTA
ACTATTATACGGACGTCTCTCGATTAAGTTGAGGTTCTTCTACCGCACTC
CACTCCATTGATTGTGGTTGTGGAGTACATATAAAAAGATTTCGTATAAA
ACTGAGCTAGGCAAAGGCAAACTTCTTTCAGAACttataatgggcttttc
cagaaaaaaattgaatatggggggtggaggatataaaaattttcagtgat
ttacccacggacaaagtgacttttggtcccccggacaaagtgattTTGGT
CCCCCGGACAAAGagttttacccccggacaagcatcagttgaccccttgg
acgacccaaattacccccggacagagcaaatttatcccccagacaaggca
aattttgatgattattCGCTACCCCctgacaatatatcctccacctccca
tgtacggacattttctggaagagcctaataaaagatatttctttttaaat
ttttgtagcCCTCGAAAATCGATTTCAAGTTTTTTGGGTCAAAACGTCAC
CCGATCGAGGGCAATGAAGCCTCGTGCGTCCTGCTCACTCAGATGAAGTC
CTGCTTAGTAGGAGTTAAATATTGTTCCACTTGTTATAAGCCTTTGCTGA
CAGAATTTATCAAAACTCTTTTGGATAATAAGAATTCTATAGAGAGTAGA
TAATATGACAACCGAGATTAAATAAAGTAAATTACATGATCCAATCTCGA
ATAATTCCAAATGTATGGTTTTGTTCACCCAAAATGGATATTGGATATTG
TTAAGAAAGAACTACTTTGGGCGTGCAAACTTTCACGAACAgtaactttc
gcgattttcacgaggcttaaccttttttttgcaaaagttaatGTCTTTCc
aactcgcgaaagtttgtacgccgtAAGTAGTGGTACTCCAATAGACGATA
TTGAAGTGAGTTTATGCACTCTGCTCGGGTTGCTGACCGTTCAAAGACAT
CCTTGAATGAcagaatttttctaaaattcgtGTACTGTGTACTGTACTTC
ATATATTGAAAGTTCTGATGGAATCGCTACCTACTCttaagttccaaata
aacgccccccttgttaattttttaaaaatttccaaccccccgg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005163XLOC_005163Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009198-exon-sc0000091-1491911889:420631..420908TCONS_00009198-exon-sc0000091-1491911889:420631..420908Clytia hemisphaericaexon
TCONS_00009198-exon-sc0000091-1510915933:420631..420908TCONS_00009198-exon-sc0000091-1510915933:420631..420908Clytia hemisphaericaexon
TCONS_00009198-exon-sc0000091-1575043694:420631..420908TCONS_00009198-exon-sc0000091-1575043694:420631..420908Clytia hemisphaericaexon
TCONS_00009198-exon-sc0000091-1491911889:421324..421465TCONS_00009198-exon-sc0000091-1491911889:421324..421465Clytia hemisphaericaexon
TCONS_00009198-exon-sc0000091-1510915933:421324..421465TCONS_00009198-exon-sc0000091-1510915933:421324..421465Clytia hemisphaericaexon
TCONS_00009198-exon-sc0000091-1575043694:421324..421465TCONS_00009198-exon-sc0000091-1575043694:421324..421465Clytia hemisphaericaexon
TCONS_00009198-exon-sc0000091-1491911889:422164..422262TCONS_00009198-exon-sc0000091-1491911889:422164..422262Clytia hemisphaericaexon
TCONS_00009198-exon-sc0000091-1510915933:422164..422262TCONS_00009198-exon-sc0000091-1510915933:422164..422262Clytia hemisphaericaexon
TCONS_00009198-exon-sc0000091-1575043694:422164..422262TCONS_00009198-exon-sc0000091-1575043694:422164..422262Clytia hemisphaericaexon
TCONS_00009198-exon-sc0000091-1491911889:422577..422741TCONS_00009198-exon-sc0000091-1491911889:422577..422741Clytia hemisphaericaexon
TCONS_00009198-exon-sc0000091-1510915933:422577..422741TCONS_00009198-exon-sc0000091-1510915933:422577..422741Clytia hemisphaericaexon
TCONS_00009198-exon-sc0000091-1575043694:422577..422741TCONS_00009198-exon-sc0000091-1575043694:422577..422741Clytia hemisphaericaexon
TCONS_00009198-exon-sc0000091-1491911889:423231..423430TCONS_00009198-exon-sc0000091-1491911889:423231..423430Clytia hemisphaericaexon
TCONS_00009198-exon-sc0000091-1510915933:423231..423430TCONS_00009198-exon-sc0000091-1510915933:423231..423430Clytia hemisphaericaexon
TCONS_00009198-exon-sc0000091-1575043694:423231..423430TCONS_00009198-exon-sc0000091-1575043694:423231..423430Clytia hemisphaericaexon
TCONS_00009198-exon-sc0000091-1491911889:427564..427672TCONS_00009198-exon-sc0000091-1491911889:427564..427672Clytia hemisphaericaexon
TCONS_00009198-exon-sc0000091-1510915933:427564..427672TCONS_00009198-exon-sc0000091-1510915933:427564..427672Clytia hemisphaericaexon
TCONS_00009198-exon-sc0000091-1575043694:427564..427672TCONS_00009198-exon-sc0000091-1575043694:427564..427672Clytia hemisphaericaexon
TCONS_00009198-exon-sc0000091-1491911889:428239..428873TCONS_00009198-exon-sc0000091-1491911889:428239..428873Clytia hemisphaericaexon
TCONS_00009198-exon-sc0000091-1510915933:428239..428873TCONS_00009198-exon-sc0000091-1510915933:428239..428873Clytia hemisphaericaexon
TCONS_00009198-exon-sc0000091-1575043694:428239..428873TCONS_00009198-exon-sc0000091-1575043694:428239..428873Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000091supercontigsc0000091:420631..428873 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.44663	0.380772	0.722188	0.39102	6.22154	4.22289	2.47837	2.86997	1.3916	2.25302	0.961177	1.47103	1.29332	1.06327	1.18299	1.32556	1.08859	1.09979	0.925352	0.420046	0.536234	0.599003	0.638709	0.644842	1.13918	2.30639	0.344793	0.0928567	0.146175	0.185495
Blast
[Close]
BLAST of TCONS_00009198 vs. Swiss-Prot (Human)
Match: HNRPC (Heterogeneous nuclear ribonucleoproteins C1/C2 OS=Homo sapiens GN=HNRNPC PE=1 SV=4)

HSP 1 Score: 91.2781 bits (225), Expect = 3.892e-20
Identity = 43/80 (53.75%), Postives = 57/80 (71.25%), Query Frame = 2 
Query:   53 TNSNDSLSMRRRVFIGNLNTEKTSKTEVEEIFNKFGELESCSLHKNFGFVQFVREKDADAAVTAMHGKMILGKRVDVNLA 292
            TN  D  SM  RVFIGNLNT    K++VE IF+K+G++  CS+HK F FVQ+V E++A AAV    G+MI G+ +D+NLA
Sbjct:    6 TNKTDPRSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLA 85
The following BLAST results are available for this feature:
BLAST of TCONS_00009198 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HNRPC3.892e-2053.75Heterogeneous nuclear ribonucleoproteins C1/C2 OS=... [more]
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