TCONS_00009101 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009101
Unique NameTCONS_00009101
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1647

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009101 ID=TCONS_00009101|Name=TCONS_00009101|organism=Clytia hemisphaerica|type=transcript|length=1647bp
CTGCTAATTAGCTTAAGTAGTTGATATTTCGTGCTTTCGTGTTTCTGTGA
CATGAAGATTTTCGAAGGTCAAAATGGCGGATACTCCAAATTCGATTTCT
GAGATTCCTCAAGATGTTTTACAAGATTTGTGCAGTCGTTTTTTGATCAA
CATTCCtgacaatgaaaaaaatgacaTGGTCCGTATATGTTTTCAAATCG
AGCAGGCTCATTGGTATTACATAGATTTCTGTCGTCAAGAGGATCCAGAT
CTACCACCTTGTGGTATGAAACCTTTCATGAACATGAttttttcgcgatt
tgaatttttgaataagACTGGGCAATCTGTATCTGCTATTTACGAAGAGT
GGAGAAAATACAAAATCAGAGTTCCTGTGTTTGGTGCAATCCTCATTGAT
GATACTTTAGAGCAGattttgttgGTTCAAGGTTTCCACAACAAAGCAAG
TTGGGGATTTCCCAAaggaaaagtaaacaaagatgaAGAAGGCTTGACTT
GTGCTATCAGAGAGGTTTGGGAAGAAGTTGGTTTCGATATTTCAAAGTTA
GCAAAAGAAAGTGATTTTATCGAGAACAATTTTCATGACCATCAGATTCG
GTTATACATAGTACCAGGAGTTGACAAGACGTTCGATTTCAAACCAAACA
CTCGAGGTGAAATCAAAgaAATTCGTTGGTTTGATTTGAGTTACTTACCA
GCCCACAAACGAGATATGAAACCCAAAGAAATTGGATTCACACCTAACAA
CTTTTTTATGATACATCCTTTTGTTAGACCACTTCGAAAATGGATCCAGG
ACAAAAAAGAAGCCATGTCTAATCAAAAACATTCCATACTGGAAGATTAC
TTCTCCGGCAGCACTTCCGAGAAATCGAATTTTCTATCAAGCGCAAGTCC
ACAGTCTGAAGAACGCCGTGAACATTTGAAGAAGAAACGAAAGAAGGAGC
AGGAAGAACAGTATAAGCAGTTGCACATCTTGATGAATCCACTTAACCCG
TTGAGAAGTCACGTGGCTAATGAGAATGCGTTAAAATCAATACTCGGCGT
ACAAACTTCTCAACCACAACCGGAACAGCCGGAAGTTATCCGGAAACTCT
TAACGGGGAATGTGCCACGATCCCCTCCAACCAATTCGTTCAAACGCTCA
CAGAAAGATCATTCCAAAGATTCGAAAAGACGGCCAAACTCGACTTCTTT
GTTCAGTACAGAAAACGATGAAAAATCATCGAGGGGTGGCGTTGATTTAC
TTGGACACTCCCTCTACAGCCCTTTTGCAATGACCAGCCTTCTACCAAAA
GACCAAGCTTCACCATTGAAAGCGAATACGAACGTCTCTTCCCAAACAAC
CTCGGGAAAGAAACTTGGCAATGCTAAGGGAAAGAAGAAATTAGTTTACG
CAGATTTCGACTTTTCTTCACCCGCTTTCACTAATTTCCGTTTCGATTAT
CAGTCTATTTTAAATGAGCTATGATGGAGAAGATCAGTTTCTAGTCTAAg
tcttttgtaaatattttatacatttttgaacCTTTTAGCAAACTTTTATG
ctatattttctaattttagcATATTTACAGTAACTCTTATTTGTCCtata
ttttttatctaaataTTGTCGTATTTTACGTACTAATTGACAACATA
Run BLAST on NCBI

transcript from alignment at sc0000090:453275..467382+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009101 ID=TCONS_00009101|Name=TCONS_00009101|organism=Clytia hemisphaerica|type=transcript|length=14108bp|location=Sequence derived from alignment at sc0000090:453275..467382+ (Clytia hemisphaerica)
CTGCTAATTAGCTTAAGTAGTTGATATTTCGTGCTTTCGTGTTTCTGTGA
CATGAAGATTTTCGAAGGTCAAAATGGCGGATACTCCAAATTCGATTTCT
GAGATTCCTCAAGATGTTTTACAAGATTTGTGCAGGTAATTTGGCTTTTc
tactattttttttttcgttttttgaatACTTATGTTTATGATAAGTTTTT
AATCATTAATGGAATTTATTTCATCACTAAATTGCTTCCATTTTAGTCGT
TTTTTGATCAACATTCCtgacaatgaaaaaaatgacaTGGTCCGTATATG
TTTTCAAATCGAGCAGGCTCATTGGTATTACATAGATTTCTGTCGTCAAG
AGGATCCAGATCTACCACCTTGTGGTATGAAACCTTTCATGAACATGAGT
ATCCTTTCAGAATTATTTCTATTGGTATAAAGCTTCACAGGCAGTTGAGT
TGGTTTCCAGTTTGGAAATTGCGACGTGTGCGCCggatatagatagatag
atagatagatagatatataTTTACCGGGGTTTAAGACTCCTAAGCAATAT
TTACATTCTCTAATTATAAACAGATAAAAACACTGatatatataaatatt
tttctttttatgaatgttataccgtgagagtgggtaacttgcatcagtgg
aggaggctaacatgcatagccctcaaatgaatgacccgtttggtcattaa
aatacaaagttaaatcaaaacaaaaatggtagactagagctgcgagcgga
gctgtaatatagtttattttaaggaccagtcaggtcattcattttagggc
tatgcatgttagcctccactgatgcaagttacccactctcacggtacAGT
TTAATGAAGACTATGAATAAAAtccttttttataggaaaaaaaagatata
atgtttctaattttttggTATACTAATGCGTTTACTTTGAGTAATTAAAA
GCAAACAGAAGAGGTCTTATTTTATGATTGGACAAGAACTTTGGGTTTAA
TACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTGGAAATA
AGACGCAGGTGTTATTCAATTAAGGTCCAGGTGTCCGAAGCCTGTTTCAA
GAGTGATATAATAATAAGCAGTACGAGAGTAATTATAACAATAATGATAG
TAGAAATAATaatagaagagaaaaaaaaaaaaaaaattgaagaaaaaaag
acaataaagaagaagaaaagaaacaaaCAGTCCGTCACAAaccgccatat
aaacaaaattcaACATTCTCAAAAAAGTGGTCTTTTTCATTTCCCAAACA
TTCctctaaagcgttcacttccacaataatttatgtaaattgcaatttcg
gtcagtccacagtcagcttcaacatatacatgtgtttttatttacttgac
cgaagtgtctactaaaacaatccgggggaaagtggcgaagcaacacgGCA
GATTATTcgcaaagtaaagaaatatcttttggcattgacaatcaaatata
acatattatattattatatccttaattcaaaaatcaaaaattcatttttc
attcgcgaaaaaaaataaaataatgaattactataagacgcccccgtttt
ttactctcgtttaatttccgatctcggaacgtgcaaaacgcccgtccgcc
ccatatccacccaatcagcttaaattcactttaattgtccattgactttc
aaaaaatagtatttaacctttccggacgcacgggccactgggtggcccat
gaatcgtgtttctatatgacgcacgggccaccgggtggcccatagctttg
taaaagattttaacagttttcgcgccaaaatacaataacatggttttgaa
taatgattttgagNAatgccttttactctatttctttattcaaagtcaaa
aattttgcctttctgaaaaaaaatctgccgatttttcggtcacgtcaCCA
GGTGTCAgacatatttcaaattttttttttggtatttcaaaacccctatt
acatgtgaaaaaaatgaggtattacttatcgtgatatcttttatcaatca
ctttctattgcaattNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtcatat
agccgtgaaatcatgcgtccggaaagggttaaaaaaaaattatgaattta
taataattacaaaaaacaaaaagtttgataacttcatcagtgaaatattc
aataaattcctagtttcaattttcagtgggcgtttttctagggcttcgtt
tatctggcaatttttgcgtcacacaaactttctcggccactcgtaataat
tatgcattgccaaatttggttctccattgtcaagtcaggattgatggtga
cgtcacctaagcataaaaaagaaaggatttcgtcagttttatgcatatat
taatttgcgagatattccattcgccgcgcgagcgcacttttcgtagacta
gtcggaatacttttttttacttgcgggattgatggtaatttttcatcttc
gttatttctAAAATGAAGCccaaccgaaaaaaaacaaaacttcagaaagt
tgcatATTttcagtgagtaaacgattctgacaattaacaaaattgatgat
gatgattttttttcggtcaggcaaatgtctcgtattgggggttctagtct
tgaccaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgcgagattgaa
gcgtttgggtaaacgagacaaaactcaaaaaaagctggtgttttgaagcg
cttccgtgctctcgaaatatcgctgtttgtgacggaCTGACAAAGGGTAA
TGATAATAATTAGCTAGACTACTTTTCTGCCTTGGAAGTCAAGATAAAGC
TACGAAGGTGATTTTTGAGAGTTGATTTGGATGCTGAGGAAAGGTCTATG
TCAAGTTTTGAATGAAGGCTGTTCCAATCCTTAGTAACAAGGTTTGCAAT
ATTATAAGAACCATACGTTACCGAGTTTGTGATAGTTAAGTCAAGCTGAT
AATTGGTGCTTCGTGTATTGTGATCCTCTCTAAGTTTCCTAAGAAAGTTA
TCAAAATAAACAGGTAATTTCTTGTTGAAGAAGTCAAAGGCAAATAGACA
ATTTTTAAGAGAACGCTGTTTGATAATGGGGAGAATACGTGAATTGATGT
AAAGTGGTAAAACAGATTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNGATTCTATTTAGACGCTCTTGAGTAGTAAAACCTAGAAATGGAAGAC
AGTAATTGACATGGGATTCAAAGAGGGAGTAGTATACAGATAATAGCGTC
TTGTAGTCAACATAATGCCTAAGTTTCGAAAGTATACCTACAGTGCTAGC
AAGTTTTTGAGAAAGTTTGAGCAGATGAGTATCCCAGTTAAGATTTTCAT
CAATTATAACACCAAGATATTTAGCATGATGGGAAGGTTTGATTTGCTGT
CCACTTAATCTGAAGTTTAAAtgttttgtgatttttgttcTGATAGTTCT
GAATAAAATAATTTCGGTTTTTGATGTATTGAGACTTATCTTATTGGCTC
TGAGCCAATGAACAAGTAGAGCAAGATCTCTGTTTACTATCCTGTTCAGT
TCTTTCAGTGATTTCTCAGTGAATACTAAACTGGTGTCATCTGCAAAATG
AATGGAAGTGGAATAACAAACTGAATTATGCAAATCATTTATGTAGATAA
TGAACATAAGGGGTCCTAGAACAGACCCCTGAGGCACCCCATGCTTGATA
TGTCCGGCGTAGATTTGAGATTTGAGACCTGTTGCCTTTGGCTTTTCCAA
ATTAAGTTGGCGCAGCTCCGGCATAACATTTCCCTCCTTTCCAGACTGGG
TTGGTTTCGGAAAAATCAGTTaggaaaatagcaaaagaatataattttgc
aacctcgGGGGATTGCAATTTTACGGAAATGGAAATCCTCATATcgaata
aagcatcttctgaaaatttcgttcTTCCCCAtacattgaaaatgaaaaac
aaagaaactttcgttttctaattgtctttttaatctgccatgaaatTCCT
TATGACACGTTCTCCTTCTAAAAGAGGTTTAAAAATGAGGTAGAAACAAG
AAACTGTGGAATTTGATTGCAAATCCTATTAAGTCACAACCATAGAGTgg
tgacttttagttttaatgacttgttctcatttgtttggtttccgtaataa
aaagaaagttggtATTGTGgactttaaacatgttttaaatGGAGGTATTT
CCACTAACTGAATGTGTATCACACCAGGCGTAATtaatattgggctcttc
cagaaaaaatccgttcatggggggtggaggatgaattgttcaggggtatt
gaaaaaataccaaaaattgcaatgtccagggggtaaattccaatgtccag
gggtaattttttgtgtccacggggttgatttgatgtttgtccaggggtat
aacccgtgtcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNgtaattcatgaaaaaaataata
tatcctccaccccccatgaacggattttttctggaagagcccatatCAAT
CGAAGGGTATTTTTAATCAACTTTGTTGAACTTAAGCGAACTTTGTTGTC
CCATTAATGTTTGACTAAGTTCGACTAATGGAGTTTCAAACAAAATATGA
GAAAACCCTTCCAGGCCTCTGCGAGCAAGAGTAAAAAACATCAGCGATCT
GAGTATTGATCCTTGAAGTTAGATTAGAGCTTACTTACttgtctgaaata
tttttcttggacagcacaaaaaacaaaaaattttcttttgcaaCCGGGTG
ACTCTAAAAAAAAGGTTCACCTGGCCGATTTCTGAAACAACATTCATTTT
TTTTGGCCTCTTTTATTTCTCTGAAAATAtacagggttcgaattataaat
tttaggagCTTTGCAATTTTTCTGAGTGAAGCGAGGTAAAAAAGGAGCGC
TGCAGGCAAAATTTTTTCACCGTTTGCGAAAcatttttcgtattttttgc
aatgttgtttggaagaaaatgcaAAAGTATCTTCAATGCATTTCTCTAGA
AAAGCGAAGTAAGACTAAGTAAGAGATTATAGACAAGGCAAAGAatagtg
aagttttgaagtaaTGAGTAGAtgaagcaatagataaacgagtgaataaa
gttgtgagtttataaagcaataagTAAACGAATAATTAAAGTTGCGGTAC
CAAGTATATAAAGCAAtagatgaatgaatgaataaagtagccaagtggca
agttgataaagcaatagataaacaaatgaagaaaGTTGCGAGTTTTTAAA
GCAATAGGTAAATGAATGAAGAAAAAGTTGCGAGGTTGCAAGTTGATAAA
cgaatagataaacgagtgaataaagttgcAAGTTATAAAGCAATatataa
acgagtgaataaagtagcaaagtggcaagtagataaagtaatagataaac
gaatgaagaaagtttcGAAGTAGCatgtttataaagcaatagataaacaa
atgaagaaagttgcaagtttataaagcaatagataaacgagtgaagaAAA
AGTTGCGAGGTGATAAAGcaatatataaacaaatgaaagaaGTAGCAAAA
TATATAggtgttttcttataattttttaacttcgcATTTTTGAGTTAGGA
AATCTCTTTGGGTCactaaatctaaaattcactttgcaTTTTGCGAAGTG
TGAATCTATTATTCGAACCCTGATATACAANTAATtcactttgcattttg
caaagtGTGAATCTATTATTCGAACCCTGATATACAAGTCTTTAAGCTTG
AAACTGTTAAGAGGTATGTGTCTTGATCCTGGAATTCCTGGACAATGTTT
TTTCCTTAacaaaatattagttttttcgcgatttgaatttttgaataagA
CTGGGCAATCTGTATCTGCTATTTACGAAGAGTGGAGAAAATACAAAATC
AGAGTTCCTGTGTTTGGTGCAATCCTCATTGATGATACTTTAGAGCAGGT
ATTCtaacatattttcaattttatttatccaagaggtgtttttttatttt
attgaacaTGATTTGGAcaccaatttttcaatttttttctctaaatataT
TTCGAGACTATCCCTAAcaatctttaattttttaaacagtTTAATCCTTT
CTGTGCCACCATAAttgcaaaaaagttttcatCTTTTTAATCATGAGTTG
TTAGTTGCCAGGCTAAACGCTAAATATACCCGACAATCGTTTCTAAATTT
aagtttaaaaagtttaaagtaCAATAGTGTGGCTTGTCTGTTTTTGAACT
TTGGCATCGGACATTGACATGAAAAGTAACGagttctttgaaaatttatt
ccaatcaatgattttttacaaaacATGAAGTTGCCAGTATTGAAAGAATA
ATTTTCATATGCTCTCAAAATCAATCTAACACAGTACATTTGTATTTACA
CTGCTATCTCAATAGGCCTCAAAATAGgtgaaaatgtaaaatttaaataa
ttaGATGTTACATAAATTAAGTAATaagtaatttctttttcagattttgt
tgGTTCAAGGTTTCCACAACAAAGCAAGTTGGGGATTTCCCAAaggaaaa
gtaaacaaagatgaAGAAGGCTTGACTTGTGCTATCAGAGAGGTacagtt
ttttgaaatctgTTCATCAAGAACACATACATAACTAGCAATGGTTGAAC
AGAAAACATCGTAGAATTCGCATTTGGAAACTGGAActcttacttttttt
aaataaggacCTATTGCCCAATCTAAAggaattttaaatttgttctgTAT
CTTCTTTAGAGTTAtttgaaatgtttattttgtggcacataattatttaa
atgGAAAATCCTTTTTTCCTCTACCAATTTGTAAAACATGTTTTTATACT
TATATCAACCATTGACTTTAAAGCCCGAAGGTCTAGAGtggagtagaatc
tctaacttttcccaggcaagaaaaagtgaagccacttattttccatccaa
aaCGCGTAATCAAGACGATGGGTTGTATCTAACGGTTCCCTTGTTTTTGA
ggactcaatttttgaaatctagggatagattttagtttcaattcggtgtt
tgtgtaaaaaccacgtgcaggtgttctggatgggaaataagtggttttat
ttcccatccaggagtctcgagtctagctcttcaggcttggaagtcaatga
ctAATACCaagttttgcttttaaaatGTCCCCAATTAAAATTCACTGCTA
AAATATATCCTCAGAATCTTACATGAAAACAATATGAATTCACTTGTCTT
CACCCAAAAATGATGCTATTTCAATAGCAACAGATTTTGACATCACTTTT
TCGATTGTCAGCGAATAGAAAATACAGCATAAGATTGTTTCCTTAAGAAA
AAAAGCCTCTTTCGTGAAAAGCTTTTGACtgcaaagttttcaaaatatag
cGTAAGCAACTTTTATTTCTCAGATCAACCCGCTCGGTAACATATTTGTA
AAGGGAAGAATAGCTGGTTGCTCTTCTGTCTTTCTGTCAGAGATTTTTCT
AACCTTATGCCTTCCTTTTAGGTTTGGGAAGAAGTTGGTTTCGATATTTC
AAAGTTAGCAAAAGAAAGTGATTTTATCGAGAACAATTTTCATGACCATC
AGGTGAGAAGATAtaactttctttttttcgtGAATCTTTTTTACAACACG
TTTTtaatgagaacaaactatagaagaacataaagcttcgctGGTCCAAT
TATTAAGAACAAGTGAAGAATATTTGAAGGTTTTGCCGACTCTAAGACAT
gggatttcttaagaaattataaaaacaccataaaatgatgaaaataaagc
cgatgttttaaaaacattctTAGGGTTAATCTCAAAAGTTAAGTTAACAT
CTCAAGGCtttaaaattttggactttcttataaagaaaaaacgtgtattc
aattCAAAGACATAAATTGGTTTGAATCTTAACCCTTCAAGTATCTTGGG
AGAGGGTAAAGAGCCCCCTCAAAACGAAATTTGGATTCATTGATGACACC
ATCTCCACCTGATGACCTCaccattatttgaaaatatccCCTCTACCTAA
ATCAGCTCTAGGATATTGTATCGGGTGATTGGAAAATACTATTGACTTAA
AATTTCGACAAGTTTTAGGTATTGATAATACAAGCTTTTAACCAAATTTA
AGCTAAATCATACCAGGGGTTATGTCAaaagtgagcattttaggtAAANA
AAAAAGCCTCTTTCGTGAAAAGCTTTTGACtgcaaagttttcaaaatata
gcGTAAGCAACTTTTATTTCTCAGATCAACCCGCTCGGTAACATATTTGT
AAAGGGAAGAATAGCTGGTTGCTCTTCTGTCTTTCTGTCAGAGATTTTTC
TAACCTTATGCCTTCCTTTTAGGTTTGGGAAGAAGTTGGTTTCGATATTT
CAAAGTTAGCAAAAGAAAGTGATTTTATCGAGAACAATTTTCATGACCAT
CAGGTGAGAAGATAtaactttctttttttcgtGAATCTTTTTTACAACAC
GTTTTtaatgagaacaaactatagaagaacataaagcttcgctGGTCCAA
TTATTAAGAACAAGTGAAGAATATTTGAAGGTTTTGCCGACTCTAAGACA
Tgggatttcttaagaaattataaaaacaccataaaatgatgaaaataaag
ccgatgttttaaaaacattctTAGGGTTAATCTCAAAAGTTAAGTTAACA
TCTCAAGGCtttaaaattttggactttcttataaagaaaaaacgtgtatt
caattCAAAGACATAAATTGGTTTGAATCTTAACCCTTCAAGTATCTTGG
GAGAGGGTAAAGAGCCCCCTCAAAACGAAATTTGGATTCATTGATGACAC
CATCTCCACCTGATGACCTCaccattatttgaaaatatccCCTCTACCTA
AATACTGTATCGAGTGATTGGAAAATACTattgacttaaaattttgacAA
GTTTTAGGTTTTGATAATACAAGCTTTTAACCAAATTTAAACTAAATCAT
ACCAGGGGTTATGTCAaaagtgagcattttaggtaaaatacggaccggtc
tgtaaaataccaaccagtgGCCATGTGACTAAATTGAAATTTAGTTTTGA
TTTCTGTTTGCAGATTCGGTTATACATAGTACCAGGAGTTGACAAGACGT
TCGATTTCAAACCAAACACTCGAGGTGAAATCAAAGTAAGACACCTCATC
catccattcattcatttatctttttttacaaaatgtcAGTGTTTTTAAGA
CCAACTTTGTCAttgaacaatattttttgatactttaatgggattaaatt
ttgcagggGTTAAGTTTCACGGTTCAGCTCATCCatgaaattttaatatt
ttgtggGGACTGAATTTCGAAGATGGCTTCATTGGGTGacaatattttca
tgattttgtgcCTTTTACCGTCAAATCATgaatgttggttgttgaaatac
gcattcTTAGCGCCACTTCGATGCCAGTAaatattcaaaaagtttttatt
tgacatttttcgtgttttgtttagaaatattttgcggATAAGGACTTTCT
AAATTCCCATTGGGGCTTAATTTCCCGGATGACACCCGAATCCGCGAAaa
tccacgaaatttaatccccccgaatatttatcccattaaagtatcctgtc
taatacacctatcaacccttGTTTTAAAGGTAGCCTACGAATGTCATGCT
CCGAGAAAGATTTCTCCTTGTATATCCATTTTCCAGTCCCTTTAAAGCCG
ACTGCGCTGCGGTATATCAGTATGAGCAAACTTCCAAGCTTTAGTAGTTG
CTTGGTTACTAGGGAGCCAACTTTCAAGCTTTTGTAGTTGCTTGGTTACT
AGGGTTCTCAAGAAGTGAGAAAAGAATGGTCATTTTTCTCCCTCCCAAAA
ATTCCCAAAGTTAACCAAATTTCTTCCACCCATTCTTTCAGCAgtatttt
agcaaaaaaacaatcagttccttttcttttaataaaacgGTTGAAAGGTA
TTTATTATGCATTGGAAGGTTTCAAAGCttgttattcatgatatgcacca
ttgcaatgtcttctgacatttcatcatggacccaacagctgattggttgt
aagtgacgtaaaatcaatcagtacgtcactttcaaccaatcagctgttgg
gtccgtggaagacaccattgcaatggtgcaaatcttgttattgaattttt
ttaggaAATTCGTTGGTTTGATTTGAGTTACTTACCAGCCCACAAACGAG
ATATGAAACCCAAAGAAATTGGATTCACACCTAACAACTTTTTTATGATA
CATCCTTTTGTTAGGTGAGAAAGTACAAGTTATCAATTCTGAAATTTGAA
CGGTAATTGTGGGCAATTCGCGaaacattttgtaaaatatcaTATTTAAA
GTATAATTCTAACCTTTTCCATCATTTTACaactttgtttgaaaatttct
atttctgCGAAAGGTTAATGCttgcgaaaaaatattttttactttgcgaa
agtaaataatatcagaaattttcgcgatttttcaaCCACGCGAAAGTTTC
TATTCGCAAAAGCTTTTACGGCTATaatattgactttttatttccaTCGA
AAAATGAAACGGATCTCAGCTTCTCAAAATATAACAGACAGTGTTGACTG
TGCTACGACTTTggaatgattgctgaatttgtggggattgttgatttttt
ttttttgcccctCATAAGAAACGTTCTTCCCCATCGTTACTTTAGAGTTC
GGTTTTTGCTAAACTGAAAAAGGAAACAAAGAGCAATTTTAgctattatt
ttttcaaacaccCTGAAGAATGATCCTTAATCGAAATTTCATTCCAAAAA
GAGCAAATTGTTAACtccttttcaaatgtttttacgATTCATCTTAGACC
ACTTCGAAAATGGATCCAGGACAAAAAAGAAGCCATGTCTAATCAAAAAC
ATTCCATACTGGAAGATTACTTCTCCGGCAGCACTTCCGAGAAATCGAAT
TTTCTATCAAGCGCAAGTCCACAGTCTGAAGAACGCCGTGAACATTTGAA
GAAGAAACGAAAGAAGGAGCAGGAAGAACAGTATAAGCAGTTGCACATCT
TGATGAATCCACTTAACCCGTTGAGAAGTCACGTGGCTAATGAGAATGCG
TTAAAATCAATACTCGGCGTACAAAGTTAGTggattttttatcattcttc
gCAACGGAATTAGCCTAGTTATagctaagcccgtattcacaaggctcaGA
TGCACGGCTTACGGCAATGTAGCGTTTTCTgggctttaaagattttttta
cacaggaaaaaaaataaacagatcACCCGGGTGGGAAAAGAATTTCACAT
CTTAGAACGTGCAAGAAATTCACCCGGGTGGGAAAATCGttcaagttttc
aagttttcccACTTGGGTAATTCACTTAATTTTTCCTGTGACATATTTAC
GGATTACTTATTCAGTCAcgacttaccatcagatttatcctagtgactga
atcaaactaggtTAGATTTCCAGGCTACAACAGAAAGTGATTTCGATGAG
AAAACAAACACTACGCCGCACTACGGTTTAACTTATTAAAGATTTCTTTT
ACTGGACAGTCACAATTGatctttattcatgatatgcaccattgcagtGT
Ctcctgacattacatcacggacccagcagctgattggttgtaagtgacgt
aaaatcagtcaatacgtcacttgcaaccaatcagctgttgggtccgtgga
agacattgcaatgataCAAAACGAAAAATAGGAACATATTCTTTATCACG
TCATGACGCCAGTGGTTTAACTTACTAAAGAAACATAGAACAATTTTTTA
GAGGGTTTAACCATAGtaaagcctgattttcgaaaagaaaattttccgtt
aaaaaatgccggaaatcgccgtttttgcagattttcattagattttttcg
ttttatatctttgtaaaaatacacacaaacttttcatgaattttgttTCT
CCAATTTCCAAATTCGCCTGATTAAATCCCTctcaaaaatcgtattttgg
tcATTCCTTAAATtagacccacgcaaaaatttatccacttgaGGCAATTT
TCAAAGTACCCCGGAAAATGCACACCTCCGAATATTTTGAGGAGCGAGCA
AGGCTGGCCCcgtaataaataatttttttcgggCTTTTTATGAGGGGTTC
GAACTGTGTTGATTTGCCAGCTTCATCGCAGCATCTTTACGCAGTACCAT
CCAAATTTCTGTAGCTTTAGCGCGCTGGAATATTGAGCAAATTTTTTGTG
AAGTTGAGCCCAGGCACACATATGTGTTAACAATGATAATGCCCGATGAT
ATTTagcatttttgattttcaattgaaCTAATTATTCTAGTATCCGGAAT
TCCTCAGAAATCGCCGGAAGAGCCGAAGATCACTAGGAAACCGTTCGCTC
GTCCGTTCTTTTTTCACTATCTTTTCCATTATCGCCATATAAACTACAGT
CgactttccataactcgaacctcctcAACTCGATTCTCTCCATACGAATT
TAACTCGAACGATTTGCCGGTCTTTTGAGGAGATTCTTAGGCTGTTCTGT
CTCTCTATACCTCGAATTTCCGTAACTCGAACGATTACTGATTATCCCCT
TGGCGTTCCAGCACTCGACTATGTACATTTCCCTACTTGCTCTTACttta
atcatcaggtaggtccaatcagcGTTCCGGCTTGTTTCATTTATACGCTT
CATTTTCTAACCATAGCTTCTCAACCACAACCGGAACAGCCGGAAGTTAT
CCGGAAACTCTTAACGGGGAATGTGCCACGATCCCCTCCAACCAATTCGT
TCAAACGCTCACAGAAAGATCATTCCAAAGATTCGAAAAGACGGCCAAAC
TCGACTTCTTTGTTCAGTACAGAAAACGATGAAAAATCATCGAGGGGTGG
CGTTGATTTACTTGGACACTCCCTCTACAGCCCTTTTGCAATGACCAGCC
TTCTACCAAAAGACCAAGCTTCACCATTGAAAGCGAATACGAACGTCTCT
TCCCAAACAACCTCGGGAAAGAAACTTGGCAATGCTAAGGGAAAGAAGAA
ATTAGTTTACGCAGATTTCGACTTTTCTTCACCCGCTTTCACTAATTTCC
GTTTCGATTATCAGTCTATTTTAAATGAGCTATGATGGAGAAGATCAGTT
TCTAGTCTAAgtcttttgtaaatattttatacatttttgaacCTTTTAGC
AAACTTTTATGctatattttctaattttagcATATTTACAGTAACTCTTA
TTTGTCCtatattttttatctaaataTTGTCGTATTTTACGTACTAATTG
ACAACATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005102XLOC_005102Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009101-exon-sc0000090-1491911889:453275..453409TCONS_00009101-exon-sc0000090-1491911889:453275..453409Clytia hemisphaericaexon
TCONS_00009101-exon-sc0000090-1510915933:453275..453409TCONS_00009101-exon-sc0000090-1510915933:453275..453409Clytia hemisphaericaexon
TCONS_00009101-exon-sc0000090-1575043694:453275..453409TCONS_00009101-exon-sc0000090-1575043694:453275..453409Clytia hemisphaericaexon
TCONS_00009101-exon-sc0000090-1491911889:453521..453672TCONS_00009101-exon-sc0000090-1491911889:453521..453672Clytia hemisphaericaexon
TCONS_00009101-exon-sc0000090-1510915933:453521..453672TCONS_00009101-exon-sc0000090-1510915933:453521..453672Clytia hemisphaericaexon
TCONS_00009101-exon-sc0000090-1575043694:453521..453672TCONS_00009101-exon-sc0000090-1575043694:453521..453672Clytia hemisphaericaexon
TCONS_00009101-exon-sc0000090-1491911889:459845..459972TCONS_00009101-exon-sc0000090-1491911889:459845..459972Clytia hemisphaericaexon
TCONS_00009101-exon-sc0000090-1510915933:459845..459972TCONS_00009101-exon-sc0000090-1510915933:459845..459972Clytia hemisphaericaexon
TCONS_00009101-exon-sc0000090-1575043694:459845..459972TCONS_00009101-exon-sc0000090-1575043694:459845..459972Clytia hemisphaericaexon
TCONS_00009101-exon-sc0000090-1491911889:460518..460616TCONS_00009101-exon-sc0000090-1491911889:460518..460616Clytia hemisphaericaexon
TCONS_00009101-exon-sc0000090-1510915933:460518..460616TCONS_00009101-exon-sc0000090-1510915933:460518..460616Clytia hemisphaericaexon
TCONS_00009101-exon-sc0000090-1575043694:460518..460616TCONS_00009101-exon-sc0000090-1575043694:460518..460616Clytia hemisphaericaexon
TCONS_00009101-exon-sc0000090-1491911889:462397..462477TCONS_00009101-exon-sc0000090-1491911889:462397..462477Clytia hemisphaericaexon
TCONS_00009101-exon-sc0000090-1510915933:462397..462477TCONS_00009101-exon-sc0000090-1510915933:462397..462477Clytia hemisphaericaexon
TCONS_00009101-exon-sc0000090-1575043694:462397..462477TCONS_00009101-exon-sc0000090-1575043694:462397..462477Clytia hemisphaericaexon
TCONS_00009101-exon-sc0000090-1491911889:463138..463209TCONS_00009101-exon-sc0000090-1491911889:463138..463209Clytia hemisphaericaexon
TCONS_00009101-exon-sc0000090-1510915933:463138..463209TCONS_00009101-exon-sc0000090-1510915933:463138..463209Clytia hemisphaericaexon
TCONS_00009101-exon-sc0000090-1575043694:463138..463209TCONS_00009101-exon-sc0000090-1575043694:463138..463209Clytia hemisphaericaexon
TCONS_00009101-exon-sc0000090-1491911889:464229..464338TCONS_00009101-exon-sc0000090-1491911889:464229..464338Clytia hemisphaericaexon
TCONS_00009101-exon-sc0000090-1510915933:464229..464338TCONS_00009101-exon-sc0000090-1510915933:464229..464338Clytia hemisphaericaexon
TCONS_00009101-exon-sc0000090-1575043694:464229..464338TCONS_00009101-exon-sc0000090-1575043694:464229..464338Clytia hemisphaericaexon
TCONS_00009101-exon-sc0000090-1491911889:464922..465199TCONS_00009101-exon-sc0000090-1491911889:464922..465199Clytia hemisphaericaexon
TCONS_00009101-exon-sc0000090-1510915933:464922..465199TCONS_00009101-exon-sc0000090-1510915933:464922..465199Clytia hemisphaericaexon
TCONS_00009101-exon-sc0000090-1575043694:464922..465199TCONS_00009101-exon-sc0000090-1575043694:464922..465199Clytia hemisphaericaexon
TCONS_00009101-exon-sc0000090-1491911889:466791..467382TCONS_00009101-exon-sc0000090-1491911889:466791..467382Clytia hemisphaericaexon
TCONS_00009101-exon-sc0000090-1510915933:466791..467382TCONS_00009101-exon-sc0000090-1510915933:466791..467382Clytia hemisphaericaexon
TCONS_00009101-exon-sc0000090-1575043694:466791..467382TCONS_00009101-exon-sc0000090-1575043694:466791..467382Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000090supercontigsc0000090:453275..467382 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.00614	1.27331	1.86243	1.90816	16.7272	15.0105	10.1365	10.0489	7.69611	8.32966	6.65997	6.59266	5.0931	5.33532	3.26055	3.48036	5.70108	5.11649	1.59394	2.51579	3.82393	3.82308	6.63028	6.78603	3.43732	6.57739	3.11588	1.88478	5.45732	6.16039
Blast
[Close]
BLAST of TCONS_00009101 vs. Swiss-Prot (Human)
Match: DCP2 (m7GpppN-mRNA hydrolase OS=Homo sapiens GN=DCP2 PE=1 SV=2)

HSP 1 Score: 269.626 bits (688), Expect = 1.718e-83
Identity = 119/233 (51.07%), Postives = 159/233 (68.24%), Query Frame = 2 
Query:  101 EIPQDVLQDLCSRFLINIPDNEKNDMVRICFQIEQAHWYYIDFCRQEDPDLPPCGMKPFMNMIFSRFEFLNKTGQSVSAIYEEWRKYKIRVPVFGAILIDDTLEQILLVQGFHNKASWGFPKGKVNKDEEGLTCAIREVWEEVGFDISKLAKESDFIENNFHDHQIRLYIVPGVDKTFDFKPNTRGEIKEIRWFDLSYLPAHKRDMKPK-EIGFTPNNFFMIHPFVRPLRKWI 796
            EIP  VL D CSRF+++IP  E+++ +R+CFQIE AHW+Y+DF  Q  P LP CG++ F   +FS   FL   G+ V  + +EW++YK+ VP +GAI++D+TLE +LLVQG+  K+ WGFPKGKVNK+E    CA REV+EE GFDI     + D+IE   +D   RLYI+PG+ K   F P TR EI+ I WF +  LP H+ DM PK ++G  PN FFM  PF+RPLR W+
Sbjct:    7 EIPGSVLDDFCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFYMQNTPGLPQCGIRDFAKAVFSHCPFLLPQGEDVEKVLDEWKEYKMGVPTYGAIILDETLENVLLVQGYLAKSGWGFPKGKVNKEEAPHDCAAREVFEETGFDIKDYICKDDYIELRINDQLARLYIIPGIPKDTKFNPKTRREIRNIEWFSIEKLPCHRNDMTPKSKLGLAPNKFFMAIPFIRPLRDWL 239
The following BLAST results are available for this feature:
BLAST of TCONS_00009101 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DCP21.718e-8351.07m7GpppN-mRNA hydrolase OS=Homo sapiens GN=DCP2 PE=... [more]
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