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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00009020 ID=TCONS_00009020|Name=TCONS_00009020|organism=Clytia hemisphaerica|type=transcript|length=3440bp
CTctactgaaaatcaaaacacaggaaagaaaaataagagGTTGTTGCTGG
CTGACAATCCTCTAAATTAAGAAGAATACTCTAACTCATTCAAGAAGGTA
TTATAAAACATTATGTTGAAAACATGCTTCATATTAGTTGTTTTGTTTAG
CGTTTGTTCTCgtgtatttttggttgattcAAATGAACGAGAAGTTCGAA
GTATAGAGAATGATCGAAATGCTGAAGTCAAGaaggaaataaaaaagctt
gaaGACATTGAAGCAAAGCTTGATAAATTAAGATCCCTTTTGAAAGATCC
CCTTGACGAAGAACATGATATTTTGGATAATGAGACTGATGATACTCATG
CTCATGAATGGACTGTCCAACTGAACTCTGATAAATACGATGACGCCAAA
GATATTGCTAAACAATATGGTTTTGACCATATTCATAAGCTCGATGTTGG
TGCACAATGGTATATTAGAAATGATGGTCAAACTACTGGCCCTGCCGGAT
TTGATAGCAAGATAGAGTCTGCATGGAAGAGAGGATACACTGGTAAAGAT
GTTGTATTATCAGTGTTAGATGATGGTATGGATCATACTCATCCAGAGTT
AAAAGATAATTATGACCCTAAAGCCAGTACTGATTTAAATGGTCACAAAG
CAGATCCATTCCCTAATGATTCAGATCCTTACAACGCACATGGAACTAAA
TGTTCTGGTACCATTGCAGCAAAAGGAAACAACAGCCTTTGTGGTATCGG
TATTGCATATGACTCCAAAATTGGTGCCATTAGGATGTTGGATGGTAAAG
CCACAGATGCTTTGGAAGCCAATGCATTGTCATTCAAACGAGATCACATT
GATATTTACAGTTGTTCATGGGGTCCTAAAGATAACGGTGCAACATTTGG
AAGACCAGGTCGATTGGGAAAGATTGCTCTTCATCAAGGAGCCAAATTTG
GAAGAAATGGCAAAGGATCTCTCTTCATTTGGGCTACTGGAAATGGAGGT
ATGCAGCGTGATGACTGCAATGCTGACGGATATGTTAACAGTATCTACAC
CCTTGGTATCGGGGCTGTCAACGAGCATGGTGTCTCTACATACTATGGTG
AACGATGTGCCGCCATGTTTGCCGTTACTTACTGTAGTGGTAAACACAAA
GCTGGATTAGGTGATCCAAAAGCCAATGTCATCACCACCTACCTCCATCA
TCAATGTACTGATCATTTTGTTGGTACTTCTTCTGCTGCTCCGTTAGCTG
CCGGTATCTTTGCTTTGGTTCTTGAAGCTAACAAAAATATCACCTGGAGA
GATCTTCAACATTTGGTGTTCCAAACTGCTCAGAAAGTCAGCCCTAACGA
TCTTGGTTGGTTTAAGAATGGTGttggaaaattctacaaccaTAAATTTG
GATTCGGTGTTTTGGATGCTGAAAAGCTTGTTGATGCTGCATTGAATTGG
ACCACTGTTCCAAAACAAAAGAGCTGTCATTTCATCTTGAGATTCAAGAA
TGGTAACATTCCATCCAAGGAGCATTTCAAACTTGCGTTCAACACTGATG
GTTGTCAAGCTTGTAAGGTAAAGGAGAGTGACGGTACCTGCAAAAATGCC
ATCACTAAATTGGAACACGCCGTTGTTAACGTCACCTTGAAACACCGACG
ACGTGGTGATTTAAGCATCAAGTTGGTATCACCGAGTGGTACGGTCAGTA
ATTTACTTCATCAACGTCCATTTGATGGATCATCTGCTGGATTGAAAGGT
TGGACCTTCATGACCGTCTATAACTGGGGTGAGAACCCTAAGGGTACCTG
GAATCTGATTTTCACCGATAATAAAGGTATGAATCCGTTCGACACTAAAG
ATCGTCGTGACGTTGAGGAGGAATACATGGAGGAATTAGACAAGAAGAAG
GAACGTGAACAACGTCAACAACGTCAACAACAACGAAATGTTGCCGCTGA
CACTCAACGTCAAGACGAAAACGTCGTCACTGCCCAAGGAGATATCTATA
AACGCGAAGACGAGGTTTCCAACGACGCTTACGCCAAATTGTACGACAAA
TACCGACGTGACGAATCCGCATACGAGCAGTTGAAACGAGAATTATACGA
GCGACAAAGTCAAGGATACGCTGATGATTATTACCGATCCGGTAGAAAAC
GAAGGTCGAACTTTGCTGATGATACGACGGACTACGTCAAGTATAAGAAA
GACACTATTTCTGATTTGAAATATGAATACGAAAATGATATCTTGAAACG
AAGTGATCTTGCTGGTGAAGTTATAGATCTTAGAATTACACTTTATGGGA
CTGGTGaataaattatcataatttttattttcggttagaaaattaaatat
tttctctctcaATGGGTTATTAttgttagaaaaaaattaaaagcacTATT
TATGTCAACCACAAGGAAGCTCAACCAGCGTGACCGATCTGCACTAATTA
AAACGTCTAATGTGGCTTATGTTGTTACATTTCTTATTAATTGATGAGAT
TAATTATCAGAGTTTCCTTGTCAAAGCGGTATTCTTTGCAAAAGGACTTT
CTAAGGATATTCTCTTTCATACTTCATACTTCCTTATGCCCAAAATGAGC
ATCGAAGATGAAATTTAATTTCACACGATGCAGAAGATTAATGGTGCCTG
TGATTGACATAGATTGGTAGATTACCATCATCGGTAGATAAATCAAGGAG
ggattttagttttaaaatcACGGCTTGGTCACACGTCCAGGAAAAATGTT
AAGGAAGTTTCTCCAGATTTATCTCGCGATGTTTGGTACCATTTCTTAAT
TCAAAATGCATTGTCTAGCTAAGGAATAATAATTCTAGCGCCAACCACAG
CGAACAAACGAACAAACGAATGCtattcctttgtttactttgcatGCTTG
CGAATAATTCTGGGCAAGATTGAAAGCTTTGGCTTGACAAACCACCTTCG
GGCTTTAGCTGAACAttgcattttgaaatttaaattatttattgCATTGT
ATCTTCATCTAACTAAAGTATTGTGTAGTCTTTGGGGTTTCAAATTAgct
aaattatttttcaatttaatcaTCTTATTTTTCTACTAAATAGTTTCTAA
CCTAGAAAATAGCAAACCGCTAGTCTCACAAATGAAAGTCtcctttttat
taaaaaaaaagtcaacaaatagTTCGTTGATGAATTGAAATAACCAATTA
TGCCTACGAGGTTGtaaattttagtaattttgaGCAATTAGGGAGCTTAA
GATTGTGACTTAAATGTCAAACTTAGATATCTTTAGAGATCATTGATATT
AAGGTCCCTACAAAATAGCCTATTTTCCTAActaatatatttattttttg
actaatttttcattttggtataattattttttgtttgtagtGATGTTTTG
TGTATATTTTgctttaaaatataaaaaactgtTATTAGCA Run BLAST on NCBI protein sequence of TCONS_00009020-protein >TCONS_00009020-protein ID=TCONS_00009020-protein|Name=TCONS_00009020-protein|organism=Clytia hemisphaerica|type=polypeptide|length=732bp
MLKTCFILVVLFSVCSRVFLVDSNEREVRSIENDRNAEVKKEIKKLEDIE
AKLDKLRSLLKDPLDEEHDILDNETDDTHAHEWTVQLNSDKYDDAKDIAK
QYGFDHIHKLDVGAQWYIRNDGQTTGPAGFDSKIESAWKRGYTGKDVVLS
VLDDGMDHTHPELKDNYDPKASTDLNGHKADPFPNDSDPYNAHGTKCSGT
IAAKGNNSLCGIGIAYDSKIGAIRMLDGKATDALEANALSFKRDHIDIYS
CSWGPKDNGATFGRPGRLGKIALHQGAKFGRNGKGSLFIWATGNGGMQRD
DCNADGYVNSIYTLGIGAVNEHGVSTYYGERCAAMFAVTYCSGKHKAGLG
DPKANVITTYLHHQCTDHFVGTSSAAPLAAGIFALVLEANKNITWRDLQH
LVFQTAQKVSPNDLGWFKNGVGKFYNHKFGFGVLDAEKLVDAALNWTTVP
KQKSCHFILRFKNGNIPSKEHFKLAFNTDGCQACKVKESDGTCKNAITKL
EHAVVNVTLKHRRRGDLSIKLVSPSGTVSNLLHQRPFDGSSAGLKGWTFM
TVYNWGENPKGTWNLIFTDNKGMNPFDTKDRRDVEEEYMEELDKKKEREQ
RQQRQQQRNVAADTQRQDENVVTAQGDIYKREDEVSNDAYAKLYDKYRRD
ESAYEQLKRELYERQSQGYADDYYRSGRKRRSNFADDTTDYVKYKKDTIS
DLKYEYENDILKRSDLAGEVIDLRITLYGTGE Run BLAST on NCBI transcript from alignment at sc0000089:87584..95545- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00009020 ID=TCONS_00009020|Name=TCONS_00009020|organism=Clytia hemisphaerica|type=transcript|length=7962bp|location=Sequence derived from alignment at sc0000089:87584..95545- (Clytia hemisphaerica)
CTCTACTGAAAATCAAAACACAGGAAAGAAAAATAAGAGGTTGTTGCTGG
CTGACAATCCTCTAAATTAAGAAGAATACTCTAACTCATTCAAGAAGGTA
TTATAAAACATTATGTTGAAAACATGCTTCATATTAGTTGTTTTGTTTAG
CGTTTGTTCTCGTGTATTTTTGGTTGATTCAAATGAACGAGAAGTTCGAA
GTATAGAGAATGATCGAAATGCTGAAGTCAAGAAGGAAATAAAAAAGCTT
GAAGACATTGAAGCAAAGCTTGATAAATTAAGATCCCTTTTGAAAGATCC
CCTTGACGAAGAACATGATATTTTGGATAATGAGACTGATGATACTCATG
CTCATGAATGGACTGTCCAACTGAACTCTGATAAATACGATGACGCCAAA
GATATTGCTAAACAATATGGTTTTGACCATATTCATAAGCTCGATGTTGG
GTATGGTGTTTATAGATTTAGTCACTCTAAAAAGTCCTTAGAGGAAGCAG
AAAAGAAGAAAAAGGAGATGATCAAAGAGAAACAAGAAGAAATAGAAGTT
GAAAAAACAATTAGTAAACGTGATCACATTGATTCTGCTAGACTTCTTGC
AAATGATGAAAAAGTTACTTGGATGAAACGTGAGAGAATTCTTCAAAGAG
AAAAGCGTGTTCCTGTTAAAGATGCTAAAAAGGAGGCAGAAGCAGCAAAG
GATATGATTCCAAATGATCCTTATTTCAGTGCACAATGGTATATTAGAAA
TGATGGTCAAACTACTGGCCCTGCCGGATTTGATAGCAAGATAGAGTCTG
CATGGAAGAGAGGATACACTGGTAAAGATGTTGTATTATCAGTGTTAGAT
GATGGTATGGATCATACTCATCCAGAGTTAAAAGATAATTATGACCCTAA
AGCCAGTACTGATTTAAATGGTCACAAAGCAGATCCATTCCCTAATGATT
CAGATCCTTACAACGCACATGGAACTAAATGTTCTGGTACCATTGCAGCA
AAAGGAAACAACAGCCTTTGTGGTATCGGTATTGCATATGACTCCAAAAT
TGGTGCCATTAGGATGTTGGATGGTAAAGCCACAGATGCTTTGGAAGCCA
ATGCATTGTCATTCAAACGAGATCACATTGATATTTACAGTTGTTCATGG
GGTCCTAAAGATAACGGTGCAACATTTGGAAGACCAGGTCGATTGGGAAA
GATTGCTCTTCATCAAGGAGCCAAATTTGGAAGAAATGGTATGTATATTT
TGTGAATTCTTAGATAGATTTTTTTGAACCTAGGTAACAGCTGTGTCGTA
AAAGATAAATCAATCATATGATGTTATGATAAACGTAATTTATGCTGGAG
TAATTCAGACCTGCCAAATTGAGATATTGAGAGAAATCAGAAATTTTTTC
CCGAAAATCAGGGAAACACTTTTCCAAAAATTGGAACATAAGGCGAAAAT
AAAAAATTGTATTGTTTCCGGAATACAGGTGAAGGAAAAAAGCTCTCATG
CTGCACCCTGGGAAAAATCTTTTTTTGCTATTTTTGATAACTTAAGATCA
TTGAAATAGAACTTTAAAGATAACTTTTATGTACAAACAGTATGAAGTAA
GCCCTAAATATTAATGTATCAACTACTAACAAACAAAACTTGATTTACAA
GCGGGAATATCTAACCAAACAACGTTTCTCAGGTAAGTTATGGCATGTCT
TAAAATTACCATAATTTTTAGATCTCATTAGCCGACAGAAAACGACCAAA
CAAATGACTGAACATGAAAGGTACTATGATGTAGTTTCTAACCTGATGTG
TAACCTAATTGTTTTTTCACCGATTTTCACGAAAAACCGCAAAAACTGAC
GATGACGTCATAGAAATTAAAAATTGAATTTCTCAAGGACTGTTTATCCA
ATCGTCTTCAAACTTTAACCAAAGATGTATCTCACTAAAGTCGATCATTT
GAAAAAAAACATTTTTTTCGAAATTCCGATTATGTCAGCAAAAAATAGGA
TTTTTCCTTTTTTCCTGATTTCTGATGACCTCATCAAAATTTCGAAAAAT
TAATATTTTCAAATGATCAACTTTAGTAGGATACATCTTTGGTGAAAGTT
TGAAGTTAATTGGATAAACCATTCTTGAGAAATTCAATTTTTAGTTTTTA
TGACGTCATCGATTATGACGTCGTAATCAGTTTTTACGGTTTTTGCAAAA
ATTAACGAAAAAACAATTAGGTTACACATCAGGTTAGAAACTTAATCATA
GTACCCTTCATGTTCAGTCATTTGTTTGGTCATTTTCTGTCGACTAATGC
GATCTAAAAATTATGTTAATTTTCAGTTTTTGAGACATGCCATAACTTAC
CCGAGTTGATAGCTTGAGTGGTCAACTTAGCTTTTTTTATGATGAACTAT
ATGGATAAAAAAAAGATTTTCACCTGGCAGGTTTTAGGAAACACTACATT
TTTTTATTTTCGCCTAAGGAAAACTTTTTTTCTGAATATCAGAAAATTGG
TAGTCTAGTAAGCCAGACGACTAATTCAGACATAGTAGAAATAAAGCAAA
AAGTAATGGAGGGAACAATTTTAGTCGTTTAGAAACCTTTGTGCACAAAC
TCCAAACAAAAGAAAAGTGTTAATATTGCAATTATAATTTTATCCTGCTC
AAAAATTTTCTTCAAAAAAAAATGTGTATATATTTATTTGTGTGTTATAA
AATTTTTTAATTTGAGTTGATTTTGGTTTGAGAGTTTGTTGTTGCTTGAT
GAATTGTTTCTCGTCTTGCTACGCAAGTTTCTGCGTAGCTAGCCGGGGAT
TCTATAAGGCCGGAACACTGGATTCTTCCAGTTGTTTATACAAACTAAAT
CCCGTAACAATAATCATATCATTATATAACGCCTATACTTACTACGCACT
ATAAACAACTCCAGTCTAGAAAATTGGGGAAACTTTTTTGCAAAAATTGG
AATAATGAGGATATTTTTCTCAAAAATCCAAAATGCATAAGAATTACTTG
AGACAAAGTGGAAATGTGTGAGTTTCACGCCCAATGCGTGAGAGTTGACA
CCTCTGGTAATAAGTTATTCAAAAGGCTGTTGCGTTCTCCCAAAGGTCTA
TTACCAAATTTAACAAAAGGATTATAAATTGCGCAGTTACATGTTTGCAG
ATTTGATATGTTGTGATTTGTGAACTGTGTTAAGCTTATCAAGAATTTGA
AGTGTGTGAAAGGGCTGATTCAATGAAAACAAGAGTGTCAATTGTACATG
AAAAGTTAACTCATTTTAGTATATATGTACTTTATATAGTTAGTTTTGTG
CACTTTAGTGTCTTTAAAAAATTCTGCCAAAAGATTGGGACTTTTAAAAT
AGTATTAAATGCTGGCTCTGGAATTGTTTGTTTATCCTGGTTTATCAGTT
GGATTTTATTGCAATGATTTGCTTCTTTGCTTATTATATCTCAGCAACCA
AAAAAATGTAGATTCAAGGTTATTATTATAACACTAGGGAAAAGAGTGGT
CCACTTAACTACCAACTAAATCAAAAAGCATTTGGGTTAGCCTTCGACTG
CAGTCACAATACTTTACCAGGATCTTTTGTTTCCTTGCCAGTTCTCAGTT
AATGGTGCTTGGGCCCATTAGCTAATAGGGGCTAAATTTTAGAAGATAGG
ACCATACATAGCCTTTCACAGCTGAGCCACATTGGTAATATTAGTTTTAA
TTATGGAATGATTGTTTTTTTTAGTGTTTGTAGTTTTTTTTGGGTAGGAC
TTTTCCCTTTGTGTTTTGTTGGAGTATTTTTAATACTCTTAAGTTCTGAC
AATATTCAAAAAGTAGATAGGTATTGAATTGTTTTAGAATCTTAAAAATA
TTAGCTTGATATGTGTCAAAAGGATTAATACATTCTGAGAATGAGTATCT
ATTTGAAAAAAAAGAATACACTGTCCTCCTTTCTTAATTTAAATATATAT
TTTTGACTTTCTACATGGGAAATGAGTTTTAAGCTTTTCAGATTAATTCT
GATGAAGAAAAATTTTTATGATGAAATTTAATCAGAATTGTAAAGGGGAA
AGGAAGAAGTTTTCCTTTGATGTAATAATATCAAGAGATGAATACTTTGT
CTGTTGTATTTATGGAAATTTACAATTCTTCCCCTGTTTTGTCTTCATTT
TTGCTTCATAAATTATAAATGACACAGGTTTCTTATGTGTTGTTGTTTGC
TCTGCTTATTATGTATTCTAGCTTTGTTTCTCTTTCTTCGATTTTAAAAT
TTTGAGAAAGAGTTGAGGCAGGTGATAACTATGATGAAAGATCTTTCTAT
GGTCTGATTGCCTATTTCCTTTCCCATCAGATGGATGTGATTTCTTTATT
CAAAACATTTTCTTTGTTCCTAACTGTTAAATATCCGTACCCTTCCTCTT
CTAGAAATTTTGATTGATACTTATGAATATCTTCCCCATGGAAACTAAAC
AGAATTGATTTTGTAAGATTTCACAGCTATGAAAACACAACTTATTCTTT
TGAGTGAGTGGGCTGTTAGCAATTCTACTATCCATGATTTTTTATTAAAA
CTTGAAATCATGAGCAAACATAGACACGAAGTATATTTCCAATCTGTTAA
GATTTCTAGTTTTACAAAAATTAACAATTTATCACAGAAAATTCTCCATC
GGTTCTTTTTGTTTATGAATGAAATTAATATCATTGATAGCATAATTGAA
AAGTAGAATCATAGATTATAAAAAAATTGAAAAAACGTCCATGTTGTATA
ATGTCCTTGATTTATTTATATCCTTAGGGAATACCACGACTTCTTTAATC
CTAATGGTTGTTTGCCTTCCATCTAATAAGATTAATTATGTATTAAAAGT
CACTGTCACTTTTATTCATGTCACTAATGATGTGGAGGTTGATATCTCAT
AGTGAATAACTCAAACTTTAAGAAAAAGAACAACCTCTGTATTGATGATA
TTCTGAGTCACTGTCAGACAACTATTTTTTCAATTTGCAATGAGTTCTAT
AGAATCGTACCAGCTGTTTTTAAGATTGTTCCATCCCACTGTTTTCCTGA
ATTTTGTAAATTTGAATTTTCCTTGATGATTAGCTATAGATCTACGGTAT
ATATAAAGCTTAATAAACGATATCTATTCGACCAATAACATTCAAATTTT
AATTTGTAGCCCATATAGAAACTCCTTCGATCCTCTATGATTATGCAAAA
GTTAAAAAGACTTTGCAAAATTTCTCAGTTTGACCTATTTTTATCAGATT
TTTCTCAAGGTCTTTGAAATCTGCTCGAGAAAATATTTAATTTTTTTAAG
CCTAAATATTTAATAGAGCCAACCATTAGAGTCAAAGAACCACGAAATTA
TAAGTTGGGTTATGTACTACACTAAGAAGTTTGTGGTTCAAAATTACAAA
AGCTGATAATAGGAGCCTAAAAAAACAGATATTGTCAGTTCTCTTTCGAT
CACTAATCTAGAAATTCCATTGACTTTTTAGGCAAAGGATCTCTCTTCAT
TTGGGCTACTGGAAATGGAGGTATGCAGCGTGATGACTGCAATGCTGACG
GATATGTTAACAGTATCTACACCCTTGGTATCGGGGCTGTCAACGAGCAT
GGTGTCTCTACATACTATGGTGAACGATGTGCCGCCATGTTTGCCGTTAC
TTACTGTAGTGGTAAACACAAAGCTGGATTAGGTGATCCAAAAGCCAATG
TCATCACCACCTACCTCCATCATCAATGTACTGATCATTTTGTTGGTACT
TCTTCTGCTGCTCCGTTAGCTGCCGGTATCTTTGCTTTGGTTCTTGAAGC
TAACAAAAATATCACCTGGAGAGATCTTCAACATTTGGTGTTCCAAACTG
CTCAGAAAGTCAGCCCTAACGATCTTGGTTGGTTTAAGAATGGTGTTGGA
AAATTCTACAACCATAAATTTGGATTCGGTGTTTTGGATGCTGAAAAGCT
TGTTGATGCTGCATTGAATTGGACCACTGTTCCAAAACAAAAGAGCTGTC
ATTTCATCTTGAGATTCAAGAATGGTAACATTCCATCCAAGGAGCATTTC
AAACTTGCGTTCAACACTGATGGTTGTCAAGCTTGTAAGGTAAAGGAGAG
TGACGGTACCTGCAAAAATGCCATCACTAAATTGGAACACGCCGTTGTTA
ACGTCACCTTGAAACACCGACGACGTGGTGATTTAAGCATCAAGTTGGTA
TCACCGAGTGGTACGGTCAGTAATTTACTTCATCAACGTCCATTTGATGG
ATCATCTGCTGGATTGAAAGGTTGGACCTTCATGACCGTCTATAACTGGG
GTGAGAACCCTAAGGGTACCTGGAATCTGATTTTCACCGATAATAAAGGT
ATGAATCCGTTCGACACTAAAGATCGTCGTGACGTTGAGGAGGAATACAT
GGAGGAATTAGACAAGAAGAAGGAACGTGAACAACGTCAACAACGTCAAC
AACAACGAAATGTTGCCGCTGACACTCAACGTCAAGACGAAAACGTCGTC
ACTGCCCAAGGAGATATCTATAAACGCGAAGACGAGGTTTCCAACGACGC
TTACGCCAAATTGTACGACAAATACCGACGTGACGAATCCGCATACGAGC
AGTTGAAACGAGAATTATACGAGCGACAAAGTCAAGGATACGCTGATGAT
TATTACCGATCCGGTAGAAAACGAAGGTCGAACTTTGCTGATGATACGAC
GGACTACGTCAAGTATAAGAAAGACACTATTTCTGATTTGAAATATGAAT
ACGAAAATGATATCTTGAAACGAAGTGATCTTGCTGGTGAAGTTATAGAT
CTTAGAATTACACTTTATGGGACTGGTGAATAAATTATCATAATTTTTAT
TTTCGGTTAGAAAATTAAATATTTTCTCTCTCAATGGGTTATTATTGTTA
GAAAAAAATTAAAAGCACTATTTATGTCAACCACAAGGAAGCTCAACCAG
CGTGACCGATCTGCACTAATTAAAACGTCTAATGTGGCTTATGTTGTTAC
ATTTCTTATTAATTGATGAGATTAATTATCAGAGTTTCCTTGTCAAAGCG
GTATTCTTTGCAAAAGGACTTTCTAAGGATATTCTCTTTCATACTTCATA
CTTCCTTATGCCCAAAATGAGCATCGAAGATGAAATTTAATTTCACACGA
TGCAGAAGATTAATGGTGCCTGTGATTGACATAGATTGGTAGATTACCAT
CATCGGTAGATAAATCAAGGAGGGATTTTAGTTTTAAAATCACGGCTTGG
TCACACGTCCAGGAAAAATGTTAAGGAAGTTTCTCCAGATTTATCTCGCG
ATGTTTGGTACCATTTCTTAATTCAAAATGCATTGTCTAGCTAAGGAATA
ATAATTCTAGCGCCAACCACAGCGAACAAACGAACAAACGAATGCTATTC
CTTTGTTTACTTTGCATGCTTGCGAATAATTCTGGGCAAGATTGAAAGCT
TTGGCTTGACAAACCACCTTCGGGCTTTAGCTGAACATTGCATTTTGAAA
TTTAAATTATTTATTGCATTGTATCTTCATCTAACTAAAGTATTGTGTAG
TCTTTGGGGTTTCAAATTAGCTAAATTATTTTTCAATTTAATCATCTTAT
TTTTCTACTAAATAGTTTCTAACCTAGAAAATAGCAAACCGCTAGTCTCA
CAAATGAAAGTCTCCTTTTTATTAAAAAAAAAGTCAACAAATAGTTCGTT
GATGAATTGAAATAACCAATTATGCCTACGAGGTTGTAAATTTTAGTAAT
TTTGAGCAATTAGGGAGCTTAAGATTGTGACTTAAATGTCAAACTTAGAT
ATCTTTAGAGATCATTGATATTAAGGTCCCTACAAAATAGCCTATTTTCC
TAACTAATATATTTATTTTTTGACTAATTTTTCATTTTGGTATAATTATT
TTTTGTTTGTAGTGATGTTTTGTGTATATTTTGCTTTAAAATATAAAAAA
CTGTTATTAGCA Coding sequence (CDS) from alignment at sc0000089:87584..95545- >TCONS_00009020 ID=TCONS_00009020|Name=TCONS_00009020|organism=Clytia hemisphaerica|type=CDS|length=6597bp|location=Sequence derived from alignment at sc0000089:87584..95545- (Clytia hemisphaerica)
GCAAAGGATCTCTCTTCATTTGGGCTACTGGAAATGGAGGTATGCAGCGT
GATGACTGCAATGCTGACGGATATGTTAACAGTATCTACACCCTTGGTAT
CGGGGCTGTCAACGAGCATGGTGTCTCTACATACTATGGTGAACGATGTG
CCGCCATGTTTGCCGTTACTTACTGTAGTGGTAAACACAAAGCTGGATTA
GGTGATCCAAAAGCCAATGTCATCACCACCTACCTCCATCATCAATGTAC
TGATCATTTTGTTGGTACTTCTTCTGCTGCTCCGTTAGCTGCCGGTATCT
TTGCTTTGGTTCTTGAAGCTAACAAAAATATCACCTGGAGAGATCTTCAA
CATTTGGTGTTCCAAACTGCTCAGAAAGTCAGCCCTAACGATCTTGGTTG
GTTTAAGAATGGTGTTGGAAAATTCTACAACCATAAATTTGGATTCGGTG
TTTTGGATGCTGAAAAGCTTGTTGATGCTGCATTGAATTGGACCACTGTT
CCAAAACAAAAGAGCTGTCATTTCATCTTGAGATTCAAGAATGGTAACAT
TCCATCCAAGGAGCATTTCAAACTTGCGTTCAACACTGATGGTTGTCAAG
CTTGTAAGGTAAAGGAGAGTGACGGTACCTGCAAAAATGCCATCACTAAA
TTGGAACACGCCGTTGTTAACGTCACCTTGAAACACCGACGACGTGGTGA
TTTAAGCATCAAGTTGGTATCACCGAGTGGTACGGTCAGTAATTTACTTC
ATCAACGTCCATTTGATGGATCATCTGCTGGATTGAAAGGTTGGACCTTC
ATGACCGTCTATAACTGGGGTGAGAACCCTAAGGGTACCTGGAATCTGAT
TTTCACCGATAATAAAGGTATGAATCCGTTCGACACTAAAGATCGTCGTG
ACGTTGAGGAGGAATACATGGAGGAATTAGACAAGAAGAAGGAACGTGAA
CAACGTCAACAACGTCAACAACAACGAAATGTTGCCGCTGACACTCAACG
TCAAGACGAAAACGTCGTCACTGCCCAAGGAGATATCTATAAACGCGAAG
ACGAGGTTTCCAACGACGCTTACGCCAAATTGTACGACAAATACCGACGT
GACGAATCCGCATACGAGCAGTTGAAACGAGAATTATACGAGCGACAAAG
TCAAGGATACGCTGATGATTATTACCGATCCGGTAGAAAACGAAGGTCGA
ACTTTGCTGATGATACGACGGACTACGTCAAGTATAAGAAAGACACTATT
TCTGATTTGAAATATGAATACGAAAATGATATCTTGAAACGAAGTGATCT
TGCTGGTGAAGTTATAGATCTTAGAATTACACTTTATGGGACTGGTGAAT
AATGCACAATGGTATATTAGAAATGATGGTCAAACTACTGGCCCTGCCGG
ATTTGATAGCAAGATAGAGTCTGCATGGAAGAGAGGATACACTGGTAAAG
ATGTTGTATTATCAGTGTTAGATGATGGTATGGATCATACTCATCCAGAG
TTAAAAGATAATTATGACCCTAAAGCCAGTACTGATTTAAATGGTCACAA
AGCAGATCCATTCCCTAATGATTCAGATCCTTACAACGCACATGGAACTA
AATGTTCTGGTACCATTGCAGCAAAAGGAAACAACAGCCTTTGTGGTATC
GGTATTGCATATGACTCCAAAATTGGTGCCATTAGGATGTTGGATGGTAA
AGCCACAGATGCTTTGGAAGCCAATGCATTGTCATTCAAACGAGATCACA
TTGATATTTACAGTTGTTCATGGGGTCCTAAAGATAACGGTGCAACATTT
GGAAGACCAGGTCGATTGGGAAAGATTGCTCTTCATCAAGGAGCCAAATT
TGGAAGAAATGATGTTGAAAACATGCTTCATATTAGTTGTTTTGTTTAGC
GTTTGTTCTCGTGTATTTTTGGTTGATTCAAATGAACGAGAAGTTCGAAG
TATAGAGAATGATCGAAATGCTGAAGTCAAGAAGGAAATAAAAAAGCTTG
AAGACATTGAAGCAAAGCTTGATAAATTAAGATCCCTTTTGAAAGATCCC
CTTGACGAAGAACATGATATTTTGGATAATGAGACTGATGATACTCATGC
TCATGAATGGACTGTCCAACTGAACTCTGATAAATACGATGACGCCAAAG
ATATTGCTAAACAATATGGTTTTGACCATATTCATAAGCTCGATGTTGGG
CAAAGGATCTCTCTTCATTTGGGCTACTGGAAATGGAGGTATGCAGCGTG
ATGACTGCAATGCTGACGGATATGTTAACAGTATCTACACCCTTGGTATC
GGGGCTGTCAACGAGCATGGTGTCTCTACATACTATGGTGAACGATGTGC
CGCCATGTTTGCCGTTACTTACTGTAGTGGTAAACACAAAGCTGGATTAG
GTGATCCAAAAGCCAATGTCATCACCACCTACCTCCATCATCAATGTACT
GATCATTTTGTTGGTACTTCTTCTGCTGCTCCGTTAGCTGCCGGTATCTT
TGCTTTGGTTCTTGAAGCTAACAAAAATATCACCTGGAGAGATCTTCAAC
ATTTGGTGTTCCAAACTGCTCAGAAAGTCAGCCCTAACGATCTTGGTTGG
TTTAAGAATGGTGTTGGAAAATTCTACAACCATAAATTTGGATTCGGTGT
TTTGGATGCTGAAAAGCTTGTTGATGCTGCATTGAATTGGACCACTGTTC
CAAAACAAAAGAGCTGTCATTTCATCTTGAGATTCAAGAATGGTAACATT
CCATCCAAGGAGCATTTCAAACTTGCGTTCAACACTGATGGTTGTCAAGC
TTGTAAGGTAAAGGAGAGTGACGGTACCTGCAAAAATGCCATCACTAAAT
TGGAACACGCCGTTGTTAACGTCACCTTGAAACACCGACGACGTGGTGAT
TTAAGCATCAAGTTGGTATCACCGAGTGGTACGGTCAGTAATTTACTTCA
TCAACGTCCATTTGATGGATCATCTGCTGGATTGAAAGGTTGGACCTTCA
TGACCGTCTATAACTGGGGTGAGAACCCTAAGGGTACCTGGAATCTGATT
TTCACCGATAATAAAGGTATGAATCCGTTCGACACTAAAGATCGTCGTGA
CGTTGAGGAGGAATACATGGAGGAATTAGACAAGAAGAAGGAACGTGAAC
AACGTCAACAACGTCAACAACAACGAAATGTTGCCGCTGACACTCAACGT
CAAGACGAAAACGTCGTCACTGCCCAAGGAGATATCTATAAACGCGAAGA
CGAGGTTTCCAACGACGCTTACGCCAAATTGTACGACAAATACCGACGTG
ACGAATCCGCATACGAGCAGTTGAAACGAGAATTATACGAGCGACAAAGT
CAAGGATACGCTGATGATTATTACCGATCCGGTAGAAAACGAAGGTCGAA
CTTTGCTGATGATACGACGGACTACGTCAAGTATAAGAAAGACACTATTT
CTGATTTGAAATATGAATACGAAAATGATATCTTGAAACGAAGTGATCTT
GCTGGTGAAGTTATAGATCTTAGAATTACACTTTATGGGACTGGTGAATA
ATGCACAATGGTATATTAGAAATGATGGTCAAACTACTGGCCCTGCCGGA
TTTGATAGCAAGATAGAGTCTGCATGGAAGAGAGGATACACTGGTAAAGA
TGTTGTATTATCAGTGTTAGATGATGGTATGGATCATACTCATCCAGAGT
TAAAAGATAATTATGACCCTAAAGCCAGTACTGATTTAAATGGTCACAAA
GCAGATCCATTCCCTAATGATTCAGATCCTTACAACGCACATGGAACTAA
ATGTTCTGGTACCATTGCAGCAAAAGGAAACAACAGCCTTTGTGGTATCG
GTATTGCATATGACTCCAAAATTGGTGCCATTAGGATGTTGGATGGTAAA
GCCACAGATGCTTTGGAAGCCAATGCATTGTCATTCAAACGAGATCACAT
TGATATTTACAGTTGTTCATGGGGTCCTAAAGATAACGGTGCAACATTTG
GAAGACCAGGTCGATTGGGAAAGATTGCTCTTCATCAAGGAGCCAAATTT
GGAAGAAATGATGTTGAAAACATGCTTCATATTAGTTGTTTTGTTTAGCG
TTTGTTCTCGTGTATTTTTGGTTGATTCAAATGAACGAGAAGTTCGAAGT
ATAGAGAATGATCGAAATGCTGAAGTCAAGAAGGAAATAAAAAAGCTTGA
AGACATTGAAGCAAAGCTTGATAAATTAAGATCCCTTTTGAAAGATCCCC
TTGACGAAGAACATGATATTTTGGATAATGAGACTGATGATACTCATGCT
CATGAATGGACTGTCCAACTGAACTCTGATAAATACGATGACGCCAAAGA
TATTGCTAAACAATATGGTTTTGACCATATTCATAAGCTCGATGTTGGGC
AAAGGATCTCTCTTCATTTGGGCTACTGGAAATGGAGGTATGCAGCGTGA
TGACTGCAATGCTGACGGATATGTTAACAGTATCTACACCCTTGGTATCG
GGGCTGTCAACGAGCATGGTGTCTCTACATACTATGGTGAACGATGTGCC
GCCATGTTTGCCGTTACTTACTGTAGTGGTAAACACAAAGCTGGATTAGG
TGATCCAAAAGCCAATGTCATCACCACCTACCTCCATCATCAATGTACTG
ATCATTTTGTTGGTACTTCTTCTGCTGCTCCGTTAGCTGCCGGTATCTTT
GCTTTGGTTCTTGAAGCTAACAAAAATATCACCTGGAGAGATCTTCAACA
TTTGGTGTTCCAAACTGCTCAGAAAGTCAGCCCTAACGATCTTGGTTGGT
TTAAGAATGGTGTTGGAAAATTCTACAACCATAAATTTGGATTCGGTGTT
TTGGATGCTGAAAAGCTTGTTGATGCTGCATTGAATTGGACCACTGTTCC
AAAACAAAAGAGCTGTCATTTCATCTTGAGATTCAAGAATGGTAACATTC
CATCCAAGGAGCATTTCAAACTTGCGTTCAACACTGATGGTTGTCAAGCT
TGTAAGGTAAAGGAGAGTGACGGTACCTGCAAAAATGCCATCACTAAATT
GGAACACGCCGTTGTTAACGTCACCTTGAAACACCGACGACGTGGTGATT
TAAGCATCAAGTTGGTATCACCGAGTGGTACGGTCAGTAATTTACTTCAT
CAACGTCCATTTGATGGATCATCTGCTGGATTGAAAGGTTGGACCTTCAT
GACCGTCTATAACTGGGGTGAGAACCCTAAGGGTACCTGGAATCTGATTT
TCACCGATAATAAAGGTATGAATCCGTTCGACACTAAAGATCGTCGTGAC
GTTGAGGAGGAATACATGGAGGAATTAGACAAGAAGAAGGAACGTGAACA
ACGTCAACAACGTCAACAACAACGAAATGTTGCCGCTGACACTCAACGTC
AAGACGAAAACGTCGTCACTGCCCAAGGAGATATCTATAAACGCGAAGAC
GAGGTTTCCAACGACGCTTACGCCAAATTGTACGACAAATACCGACGTGA
CGAATCCGCATACGAGCAGTTGAAACGAGAATTATACGAGCGACAAAGTC
AAGGATACGCTGATGATTATTACCGATCCGGTAGAAAACGAAGGTCGAAC
TTTGCTGATGATACGACGGACTACGTCAAGTATAAGAAAGACACTATTTC
TGATTTGAAATATGAATACGAAAATGATATCTTGAAACGAAGTGATCTTG
CTGGTGAAGTTATAGATCTTAGAATTACACTTTATGGGACTGGTGAATAA
TGCACAATGGTATATTAGAAATGATGGTCAAACTACTGGCCCTGCCGGAT
TTGATAGCAAGATAGAGTCTGCATGGAAGAGAGGATACACTGGTAAAGAT
GTTGTATTATCAGTGTTAGATGATGGTATGGATCATACTCATCCAGAGTT
AAAAGATAATTATGACCCTAAAGCCAGTACTGATTTAAATGGTCACAAAG
CAGATCCATTCCCTAATGATTCAGATCCTTACAACGCACATGGAACTAAA
TGTTCTGGTACCATTGCAGCAAAAGGAAACAACAGCCTTTGTGGTATCGG
TATTGCATATGACTCCAAAATTGGTGCCATTAGGATGTTGGATGGTAAAG
CCACAGATGCTTTGGAAGCCAATGCATTGTCATTCAAACGAGATCACATT
GATATTTACAGTTGTTCATGGGGTCCTAAAGATAACGGTGCAACATTTGG
AAGACCAGGTCGATTGGGAAAGATTGCTCTTCATCAAGGAGCCAAATTTG
GAAGAAATGATGTTGAAAACATGCTTCATATTAGTTGTTTTGTTTAGCGT
TTGTTCTCGTGTATTTTTGGTTGATTCAAATGAACGAGAAGTTCGAAGTA
TAGAGAATGATCGAAATGCTGAAGTCAAGAAGGAAATAAAAAAGCTTGAA
GACATTGAAGCAAAGCTTGATAAATTAAGATCCCTTTTGAAAGATCCCCT
TGACGAAGAACATGATATTTTGGATAATGAGACTGATGATACTCATGCTC
ATGAATGGACTGTCCAACTGAACTCTGATAAATACGATGACGCCAAAGAT
ATTGCTAAACAATATGGTTTTGACCATATTCATAAGCTCGATGTTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00009020-exon-sc0000089-1575043694:95096..95545 | TCONS_00009020-exon-sc0000089-1575043694:95096..95545 | Clytia hemisphaerica | exon |
| TCONS_00009020-exon-sc0000089-1575043694:94308..94816 | TCONS_00009020-exon-sc0000089-1575043694:94308..94816 | Clytia hemisphaerica | exon |
| TCONS_00009020-exon-sc0000089-1575043694:87584..90064 | TCONS_00009020-exon-sc0000089-1575043694:87584..90064 | Clytia hemisphaerica | exon |
| TCONS_00009020-exon-sc0000089-1510915933:95096..95545 | TCONS_00009020-exon-sc0000089-1510915933:95096..95545 | Clytia hemisphaerica | exon |
| TCONS_00009020-exon-sc0000089-1510915933:94308..94816 | TCONS_00009020-exon-sc0000089-1510915933:94308..94816 | Clytia hemisphaerica | exon |
| TCONS_00009020-exon-sc0000089-1510915933:87584..90064 | TCONS_00009020-exon-sc0000089-1510915933:87584..90064 | Clytia hemisphaerica | exon |
| TCONS_00009020-exon-sc0000089-1491911889:95096..95545 | TCONS_00009020-exon-sc0000089-1491911889:95096..95545 | Clytia hemisphaerica | exon |
| TCONS_00009020-exon-sc0000089-1491911889:94308..94816 | TCONS_00009020-exon-sc0000089-1491911889:94308..94816 | Clytia hemisphaerica | exon |
| TCONS_00009020-exon-sc0000089-1491911889:87584..90064 | TCONS_00009020-exon-sc0000089-1491911889:87584..90064 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000089 | supercontig | sc0000089:87584..95545 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004252 | serine-type endopeptidase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006508 | proteolysis |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006508 |
proteolysis |
| molecular_function |
GO:0004252 |
serine-type endopeptidase activity |
Blast
BLAST of TCONS_00009020 vs. Swiss-Prot (Human)
Match: NEC1 (Neuroendocrine convertase 1 OS=Homo sapiens GN=PCSK1 PE=1 SV=2) HSP 1 Score: 421.394 bits (1082), Expect = 5.004e-131 Identity = 209/465 (44.95%), Postives = 290/465 (62.37%), Query Frame = 2
Query: 455 QWYIRNDGQTTGPAGFDSKIESAWKRGYTGKDVVLSVLDDGMDHTHPELKDNYDPKASTDLNGHKADPFPN-DSDPYNAHGTKCSGTIAAKGNNSLCGIGIAYDSKIGAIRMLDGKATDALEANALSFKRDHIDIYSCSWGPKDNGATFGRPGRLGKIALHQGAKFGRNGKGSLFIWATGNGGMQRDDCNADGYVNSIYTLGIGAVNEHGVSTYYGERCAAMFAVTYCSGKHKAGLGDPKANVITTYLHHQCTDHFVGTSSAAPLAAGIFALVLEANKNITWRDLQHLVFQTAQ-KVSPNDLGWFKNGVGKFYNHKFGFGVLDAEKLVDAA--LNWTTVPKQKSCHFILR---FKNGNIPSKEHFKLAFNTDGCQACKVKESDGTCKNAITKLEHAVVNVTLKHRRRGDLSIKLVSPSGTVSNLLHQRPFDGSSAGLKGWTFMTVYNWGENPKGTWNLIFTDNKG 1828
QWY+++ T D + W++G TGK VV++VLDDG++ H ++ NYDP+AS D N + DPFP D N HGT+C+G IA + NN CG+G+AY+SK+G IRMLDG TDA+EA+++ F H+DIYS SWGP D+G T PGRL + A G K GR GKGS+F+WA+GNGG Q D+C+ DGY +SIYT+ I + ++ G+S +Y E+C++ A +Y SG + + + LH+ CT+ GTS++APLAAGIFAL LEAN N+TWRD+QHLV T++ N+ GW KNG G N +FGFG+L+A+ LVD A W +VP++K C +++ F+ + + + T C+ +NAI LEH T+++ RRGDL + L S +GT + LL +R D S G K W FM+V+ WGENP GTW L TD G
Sbjct: 129 QWYLQDTRMTAALPKLDLHVIPVWQKGITGKGVVITVLDDGLEWNHTDIYANYDPEASYDFNDNDHDPFPRYDPTNENKHGTRCAGEIAMQANNHKCGVGVAYNSKVGGIRMLDGIVTDAIEASSIGFNPGHVDIYSASWGPNDDGKTVEGPGRLAQKAFEYGVKQGRQGKGSIFVWASGNGGRQGDNCDCDGYTDSIYTISISSASQQGLSPWYAEKCSSTLATSYSSGDYT------DQRITSADLHNDCTETHTGTSASAPLAAGIFALALEANPNLTWRDMQHLVVWTSEYDPLANNPGWKKNGAGLMVNSRFGFGLLNAKALVDLADPRTWRSVPEKKEC--VVKDNDFEPRALKANGEVIIEIPTRACEG---------QENAIKSLEHVQFEATIEYSRRGDLHVTLTSAAGTSTVLLAERERDTSPNGFKNWDFMSVHTWGENPIGTWTLRITDMSG 576
The following BLAST results are available for this feature:
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