TCONS_00008742 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008742
Unique NameTCONS_00008742
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1311

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008742 ID=TCONS_00008742|Name=TCONS_00008742|organism=Clytia hemisphaerica|type=transcript|length=1311bp
GTTTTCTTTCAGGAGTTGTACTATCTGGAAGCAATAGTGTAAGATGTGGC
GATCAGTGATATTAGTGGTTCTATCCATTGGATTGGTGATTGCCAAACGT
TGGGCTTGTCCGACGTTGAGCAATGCAATCACCCAAGAAGATATTCTTCA
TGCTGCCGAAGCCTGTAATCAAGCATATTATGATAATGTGGTTGAAGaaa
ctcaaatcaaaaacaCTCCATATAAAGTCATCAAGAAAATTGAGGAAAAT
TTGCATACTGATGCTGGAATAAGAGTTTTAGTGGCTGATCATGGAAACAC
CAGAATGATCATCTATAGGGGCACCGACGGTGGAGCGCAACTTCTCATCG
AAGGTGGAAGCGTGTTTCAAAGGAAAACCGTTGTTCGGTACGGAAATCAA
GACGTTAAAATCCTGAAATTCTTCTGGGAAGCTTTTGAGCTTGTTTCGTA
CGGTTTAAGACCTTATATCACGGATCCATCAAAGAAATATATTATTACTG
GTCATTCTCTTGGTGGTGCTATGGCTTCGATTATGGCTCTCAATGGAACA
CAATTGTATCAAGGATCGATGTGGGCGAATCCTCAATCAAGTTTGATTAC
TTTTGGTCAACCAAGAACAGGCGAACAAACATATGCCAACCTACATGATT
CTTTGATCTCCACATATCGCAAATTACGTTTTGTTTACATGGGTGATATT
GTTGCTCGAAATCCAGGACATGAATTCGGATGGCGTCATCATTCAAGAGC
CGTTTACATGGGCGAAGAGAAAACTGGTGGTTGGTTCGGTGGTTGGTTTG
GCGACGAAATGGAAGACCAAGATATGAACGCAATTGATGAAGAGTTAGAA
GATTTCCTTGACTCAGATGAGGATGAAATTCAAGATGAATTCGAGACTAC
AGAGGACGAAAACGAGGCTGAATTCAAAGCACTAGAAGCATTAACATTGA
AAAGTGTTGAGGATGAAGAAGTTCAAGATTCCAACATGAGAAAATTCTGG
ACAATCTGTTCAACGCAGAGGGCTTACAAATGCATCACTTACTTAAAGCA
TTTTATACCCAGTATCAACCATCATGCTATtgctaattatgtcaaaagtg
CCGAAGAAACACATGTGTTTAGAACGATGAAAGGAACAGAGAAAAGTAAC
TTTAATAGAGCTCTCATCGCTGCTTGCCAAGAATTGGAAGGGTAGATTTT
GTCTCGTTTGTAAAATCGTACAATATTCGATAAATGAAGTTTTCGTAGCA
CTATGAATATTATTTTGCACACAATTAAAGATAATATGACATGAATTCAA
TAAAATACTTC
Run BLAST on NCBI

transcript from alignment at sc0000087:521510..540692+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008742 ID=TCONS_00008742|Name=TCONS_00008742|organism=Clytia hemisphaerica|type=transcript|length=19183bp|location=Sequence derived from alignment at sc0000087:521510..540692+ (Clytia hemisphaerica)
GTTTTCTTTCAGGAGTTGTACTATCTGGAAGCAATAGTGTAAGATGTGGC
GATCAGTGATATTAGTGGTTCTATCCATTGGATTGGTGATTGCCAAACGT
TGGGCTTGTCCGTGAGTAGAGTTACACgttattttttaagaacatccaaa
ttttttgaaccctttaaatttttttcaagttcttaACCAGTTTTTCGGGT
GCttttgtaagaaaattatgacgtcagCAAGCGTTATGCAAACCAGGAGT
CGTcattttaaaaaggttttataGTAGTTTTTATTTAGGAATTCTTCTCC
GCGAATTTAGATGTTAGTTTAAGCGCGTATCTTCAGTAATCTCGTTATCT
AATGATATTATACAGTCAACCCTTTCTAATTTGAACCTCTCTTGTTTGAA
TAATTCTGtgattcgaactaaaatattaattcccctcagctggaaagtgg
tttaaattatgctctgtaattcgaattttttttattcgaaGAAGATCTTT
GGTTTTGAGTCAACTGTAATGAGGACTCGAATGTTTAACATGATTCTTGC
TGATTTATCCTCAGGACGTTGAGCAATGCAATCACCCAAGAAGATATTCT
TCATGCTGCCGAAGCCTGTAATCAAGCATATTATGATAATGTGGTTGAAG
aaactcaaatcaaaaacaCTCCATATAAAGTCATCAAGAAAATTGAGGAA
AATTTGCATACTGATGCTGGAATAAGAGTTTTAGTGGCTGATCATGGAAA
CACCAGAATGATCATCTATAGGGGCACCGACGGGTAAAATAACGACTTTT
TTTggtctctttttcaaaattttggtgaatttgacTTAGCATCATTCGGA
ACCGTCAAAGTATAAGCGTCTTTGATTGTTCCACTCTTCATGATTACAAC
AAGACCTTTTACTGTCGGTCGTTTTCCTGAACGAATATTCCCCCCTTGTT
TTGGAAAGTTTCCGGAAAAGGTCCAGTTGgggaaatttaaaaacattgcG
CTGAattagtctaagacgaatcactatctaagaaaaaagcccaaagccgt
aGAAAAGttgcaaacggtttttttttgccgaaaagaatTTACAGTCGGTA
GTGTTGCCAATCCTTTCTTTGAAACTACTATCATAACGCCATACCACCAT
TTCTTTCCCACCTTTACTAttactgtaacggacgataacatcgtctataa
TGCCGATGAGCTgtgaaatcaaatcaaatcactCATCTTTTTCTAGAAAT
GAACAACTGATGAAGGAAGGAGCAAGTTTTTTCCAGAAAAGGTCTGAAGT
TCGTTTCGGTGATCATGAAGTGGAGATTAATAAATTCTTTTGGGAAGCTT
TTGAGTTAGGATCATACGGTTTAAGACCTTTCTTCACGGATCCATCAAAG
AAATATATTATTACTGGTCATTCTCTTGGTGGTGCTTTAGCTTCAATTTT
GGCTCTGCGAACAACTCAACTGTTTGGTGTAAGTGTTATCGTTGTTCTAA
ATCTAcaatttttatggattttttgtataaaaatctAGCAGCAAAAGagt
ataatttattatgaatATTGATAAAAGGGATTTATCTTCTTTATGAAAAT
GGtgtcaaaatttctttatagtCTACTAAATATACTTTTGTTTTACTTCT
CAAcaattgaaaaattgtaaaattgaggATAAGAGGAAATAAATCCTTTT
CCTTctatgaggcccccccagcggactctaaattcacgcattcacgcaaa
tttttttcgcaattcacgcattcacgcaagtttttctggaaattcacgca
aacccgattttttgggaaatcggggaaattttcggaaagaTCGGGGAAAT
TGTCAAACATTTCtacaaatttgggtgaaaagcCAAGAGTCAAAGTTGAA
AAGTTTGCAGAGTCTGAATTATCAGAGAAGtcgtttgtttttgttaagtA
GTCGAGAGTGGGGAAGACGTTAGACATTACAATCTATTATAAATGGTAGA
ATGCCCTCGTAtacgaggccccccagcggaacAAAAATGGCAAGGCTGCT
ACACTGGAGATATTtttcgaccggatctggtcatgcacttgagaaaaact
taactcagtagtaATTTTTTCCTGTACACCTGACTATAAGCAGATTCGCT
TAAAGGGCTTCTTAAGTTTTTaactttaatcacatgccatcacgcaaaat
atttgattcttctaacaTGTCACTGTCGTTTAGAAAAGTTGAAACTTCTT
CCAGTTAAGgtatcgcgatagtaagtgaaaagatatgcgccgcaggcgaa
tttttgtacaaaaaatatcttaatcattatcaaaaataagtCAAACAAAC
TCCAGGGTGACaccataatgcttagctaaggggtaaggaggcgcaaccat
ggtttgcgcagagaggaaattttttgcatttctatcacctcgcgtttggc
taaaaatgctatctttaacaccattgaaaaagcATGTAGTCTAGATTCGT
TAAGAGGCgaggtacgatcgcttgatagtttgcaaaatgaggtaaaagga
tgaacatttgttgcgagcgaagcgagaaaacaaaaattttaaaaagaata
gtTTTAATCAGGGCTTGTGTCTTgatttcctaacgtggaggggccgaaaa
catTGTGACTAacggaggcgcaaccatggtttgcgccgacaggggaaatt
tctattttcacactctgatgtgcttaaatacgactccatttcagactgat
tttgccaagaaatgAGGTTCTCAAAAGTCTGCATCATGGGtattaaatat
ttctttgaattaaagATTTGTGGTGAGGCCTGACTAAACTATACTTGCAC
TCGACCTTTGGCGAGTGCTGCACTCAAAATCTCGAACAAACGTGCCACGT
TCTGCAAACTGGatgaaaagggaaattccccgagTTCACGTAAAAAACTG
ggcaaattcacgcattcacgcaatagaaaatgaattttcacgttcacgca
agtttttttaattcacgcattcacgcaatttttttccaattttcacgcat
tcacgcaaccaaaaaagcctattcacgcattcacgcaaaccgctgggggg
gcccctTCTATCCTTGTGCACGCACACAAGTTTCCTTACTTCCCCTTCTT
ACAGAAGTTTACTACTTAAAGTAAGATTTATTcacaattttttgcatttt
ttacattttgcaTTTTATAGGGATCAGCGTGGAAAAATCCTAAATCTAGT
TTGATTACATTTGGTCAACCACGTGTCGGAGATGCAGCGTATGCGGAACT
TCACGATTCCTTAATCTCAACCTATCGCAAATTGCGCTTcgtaaacaaag
cagatttgGTAACAAAACTTCCACCCCGATCATTGGGCTATCGTCATCAC
TCAaggtaaaagaaaagaaatttatacCGATTAAAGTTGCCGTTGACTtt
tctcttttgaaaaattgagttCATATATTGTTCCAGCTAGGCCCTTATAA
ATTTCGCTATAATGCAATGCCTCCTCCTCTCTGTAGCATTAACAATATGA
ATTGATTTCTCAAAAgcgttttttactttttagagcTGTATACATGGGTC
AAGAGAAAATTCCCAAGAAAGGATGGTGGATTTTCGGGGATCAACCACGA
AATCCAAAATGGCGTTTTAATAACGAtcaagaagaagatgaagaagatga
agCTCTATTGGACGAAGATGCAGAGTTGCTCCCATTGCGAGAAAATATGG
AAGAAGATATGATCGATGAGGAGCAACAGGATGCTGGTATGAGAGATTAC
TGGAAAATCTGTTCAACACCAAGAGCTTTCTTTTGTGTCAGCAGTTATAA
ACATATCATACCGAGCATGAAAAAATATCATGGTATTGTACTCTATATTC
GAAGCATTAAGGAAACCcatcttttcaaaaatcaaaaaggcaCCGAAACG
ACCAAGTTTAATGAAGACCTTGTTGCGACGTGTAAAAAGTTACAAGGATA
ATTTTATTTAGATttatattatctttttttttaacagaAATATGTAGATA
GGAATGACCAGTGGTTTGCGTGACCTGTGATTgagactttttaaaatttt
ggcgTGACCcggattttggcgtgatggcgcgATGGCGTGATAGGGAAAAA
TTTAGACATGATGTGTGATTCGGACATTTTTCCttaatttcacatttttt
gtGCGATATTCTTGATTCTGATGAGGGCTGCcgccgaggggggggggggN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNtgtgccgcccgacttttaACGAcggaccct
tagcaggactcaaaaggaagacaaaaagaaaaatgttatgaATTTTACGA
TCCTTATTGGAAATaaacccaaaatataagccctaaaagtttgcacATAA
TCAgacctgaaacaaaagaattttgtcataACAcactaattatgcagatt
ttttatagcgacaacaaaagaatcGTATTGACttgacataaactccctta
agggccattgttttcaagaaactgtttttccatctctttacattcctctg
gatGTAGTAACTAACGAgagattttttccttatttgtTTAATATTCACAC
AAAGAAGTTGAGTTATTTGTTCTATGGAGtctattcattttgtattgCTA
ACGGTAGCTCATAAATCTTAAACTTtcgcgttgttactaaaagtggtaac
ggtaggtaacgataggtaacgataggtaacgacaagtaacggtaggtaac
gacaggtaacgatgaagtaacggtcgGNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNaacgatgaagtaacgcaagtaacgaggggtaacgaaaaag
taacgaagtaacgatggggaaaaagctgaaaatggtggccctgaggtgtc
gaactatcaaaatttgttaATTTCTACACCAGAGCTAATGGTCAGACCTA
ACGACTCTGGTTAATCTATTCAAGGAATTTTGGAAAGCTGATGATTGTAT
ATCATAGGATCTGATCGTTCTGGCGAATatgactgtggagataataaatc
caatcgtttttattgttaattggtgtttgtgaataaactgaaagatttga
cggctttggtgaatcaatggtgttggtcaatgcaatgatgaaataaatgg
tgctggtcaatacaataatggaatcaatagtgccggtcaatgcaatgatg
gaatcaatggtgctagtcaatgcaatgattgaatcaaaggtgctggtcaa
tgcaatgatggaatcaatggtgctggtcaatacaatgatggaatcaatgg
taatggtcaatgcaatgatggaatcaatggtgctggtcaatacaaatgat
ggaatcaatggcgctggtcaatgcaatgatagaaacaatggtgctggtca
atgcaatgatgaaatcgATGGTGCtggaatcaatagtgctggtcaatgca
atggtgaaatcaatggtgctggtgaatgcaatgatggaatcaatggttct
ggtgaattcaatggtggaatcgatAGTGGTGCACTGGTGTACGCCCAATG
GTACTGTTGTGCAGGTGAAtacaagttagggattgtgcattttttgtaag
catcatctttataagaaatccatcgataattttcgattcaaggggtattg
actttcggcgattggttcattcaaagcaagttagggattgtgcaaaatgt
tagcatatttatttttcttataagcaccatctttataagaaatccatcga
taattttcgattcaaggggtattgactttcggcgattggttcattcaaag
caagttagggtttgtgcaaaatgtgagcatatttatttttcttataagca
ccatctttataagaatacaatcaataacttttgattcaaggggtattgac
tttcggtgattggttcattcaaagcaacttagGGTTTGTGtaaaatatga
gcatatttatttttcttataagcatcatctttataagaatacgatCAAtg
acttttgattcaaggggtattgactttcggcgattggttcattcaaagca
acttggggtttgtgcaaaatgtgagcatatttatttttcttataagcacc
atctttataagaatagaatcaataacttttaattcaaggggtattgactt
ttggggattggttcattcaaagcaagttagggattgtgcaaaatgtgtgc
atatttatttttcttataagcaccatctttataagaatacaatcaataac
ttttaattcaaggggtattgactttcggggattggctcattcaaagcaat
ttagggattgtgcaaaatgtgagcatatttatttttcttataagcatcat
ctttataagaatacaatcaataacttttgattcaaggggtattgcatttc
ggcgattggttcattcaaagcaacttggggtttgtgcaaaatgtgatcat
atttatttttcttataagcaccatctttataagaatagaatcaataactt
ttaattcaaggggtattgacttttggcgattggttcattcaaagcaagtt
agggattgtgcaaaatgttagcatatttatttttcttataagcatcatct
ttataagaaaatgatcaatagcttttaattcaagggggtATGTTATGAAT
GACTCGTTATCGACTCACCTTTGCTCTCCATTCACGTTACACTTTCATTC
AAACAttcaaaagacaaaagacatCAACTCTCTCCTCCGTTTGgcaaatt
ttgcttttacaaATTTACACAAATCTCTTTCTTTGATAATCAATACGAAG
AcgatgtaaaataaaaagatacaGCTGCTACCTCGTGTTAAAAGGTGTGA
AAATNCATAATCAATAcgatgtaaaataaaaagatacaGCTGCTACCTCG
TGTTAAAAGGTGTGAAAATACGTTTCTTgggaaaaaattttacataAACA
TGTGATCTTTCTAAACAGGATCAAACAGGATTGTTTACAACTTGTAAGCA
TATTTTGTATCATACTGCACATGGAGCTCTAAAATCGTGCGTATTACAAT
AGTCAAGAAAGTTACATAACACTAAGGGTAGACTTGACCTAGCCAAGCTG
AATTATTTATTATGCATGCTTTTCCCATGAATTATGATTTTCTCACGGGG
GCgaacaccaaaataccgacgCATTTTTCTCGAATCATcatcgctttttt
ataagaactagtaaATTTTCGTGATTTCTCAACGTAATTTTCAGGctcga
atgtttttgaaatctcAAAATATCCTTAATTCCCTTAGTTTATTCActta
ttttcttaaaagttaaaagagccgttttttgaaatctgacatttttaata
aaaaaaatactggCATTTTTTGGTTAACTTTCAATGAATTTATGAACATT
AAGAGAAGAAGTACTTTTCATTTTGAAAGACATCTTATCCCTtaatgtaa
tattgttttgttaAATTGATTTGCAGAATGGAATGTTAAAATTTTGCTAC
AATGTCAATTGCACAAGAATCAATTAAGAAACGAGCAATCAGTGAATGGc
aatcaatttttttcgaaaaaaaacgaaaccaaataaaattaaaattaaga
tGCTATTCTTATGTGAAATCGTTGACtttctttgaatgaaccaatcacca
aaattcaaaacttttaaaggttatggattgtaatgatgtaatcttattaa
gatgatgcttataagataaataaatatgctcacattttgcacaaacccca
acttgctttgaatgaaccaatcgccgaaagtcaataccccttgaattaaa
agttatggattgcattcttataaagatgatgcttataagaaaaataaata
tgatcacaTTTTGCtaaatccctaacttgctttgaaagaacctaTCGctg
aaagtcaataccccttggatcaaaagttattgattgtattcttataaaga
tgatgcttattacaaaaataaatatactcacattttgcacaatctctaac
ttgctttgaaagaaccaatcaccgaaagtcaataccccttgaatcaaaag
ttattgattctattcttataaagatgatgcttataagataaataaatatg
ctcacattttacacaaaccccaagttgctttgaatgaaccaatcaccgaa
agtcaatgccccttgaatcaaaagttattgattctattcttataaagatg
atgcttataagaaaaataaatatgctcacattttgcacaaaccccaagtt
gctttgaatgaaccaatcaccgaaagtcaatacactttgaataaaaagtt
attgattgtattcttataaagatgatgcttataagaaaaataaatatgct
cacattttggaCAAACCctaagttgctttgaatgaaccaatcaccgaaag
tcaataccccttgaatcaaaagttattgattctattcttataaagatgat
gcttataagaaagataaatatgctcacattttgcacaatccctaacttgc
tttgaaagaacccatcaccgaaagtcaataccccttggatcaaaagttat
tgattgtattcttataaagatgatgcttataagaaaaataaatatgctca
cattttgcacaatccctaacttgctttgaaagaacccatcaccgaaagtc
aataccccttggatcaaaagttattgattgtattcttataaagatgatgc
ttataagaaaaataaatatgctcacattttgcacaatccctaacttgctt
tgaaagaacccatcgctgaaagtcaataccccttggaTCAAaggttattg
attgtattcttataaagatgatgcttacaagagaaataaatatgctcaca
ttttgcacaatccctaacttgctttgaaagaacccatCGCTGAAAATCAA
TACCCcttggatcaaaagttattgattgtattcttataaagatgatgctt
ataagaaaaataaatatactcacattttgcacaatacctaacttgctttg
aaagaaccaatcaccgaaagtcaataccccttgaatcaaaagttattgat
tctattcttataaagatgatgcttctaagaaaaataaatatgctctcatt
ttgcacaaaccccaagttgctttgaatgaaccaatcaccgaaagttaata
ccccttgaatcaaaagtcattgattgtattcttataaagatgatgcttct
aagaaaaataaatatgctctcattttgcacaaaccccaagttgctttgaa
tgaaccaatcaccgaaagtcaataccccttgaatcaaaagttattgattc
tattcttataaagatgatgcttataagaaaaataaatatgctaccgaaag
tcaataccctttgaatcaaaagttattgattgtattcttataaagatgat
gcttataagaaaagtaaatatgctcaaattttgcacaatccctaacttgc
tttgaaagaacccatCGCCggaagtcaataccccttgaatcgaaaattat
agacggatttcttataaaaatgatgcttacaaaaaatgcacaatcccAAA
CTTGCATTCACCTACACAACTGTACCATTGGGCGTACACCAGTACAccac
catcgattccaccattgaattcaccagaaccattgattccatcattgcac
tgaccagcaccattgattccatcactgtgttgaccagcaccattgattcc
atcattgcattgaccagcaccattgattccatcactgtattgaccagcac
cattgattccatcattgcattgaccagcaccattgattctgtcatttcat
tgaccaacaccattgattctgTCATTTCATTGACCAACACTATTGATTCA
CCAAAGtcgtcaaatctttcagtttattcacaaacaccaatttacaataa
aaacgactggatttattatctccacagtcatattcaccagaacgatcaga
tccTGCTGTACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCCCcatcgttactt
cgttactttttcgttacccctcgttacttgcgttacttcatcgttaccga
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcttgtcgttacctatcg
ttacctatcgttacctaccgttaccacttttagtaacaacgaaCTTTCGA
GCGAAAAAAGCGGATTCTGAATAATTATATAATATTGGAAGGAAAATAAT
CTTCTTGGTAATTCGATAATTAAATGGacgaaaatctattttaaaagaTC
CTTTTTTTAAGAACTTCCTAAGAATTGTCAATAGGTGTAGGATTTTCGTC
AAAAGATTGATATTTTCCTAATTTAAAAGTCGTATGTTTTGCTATGATGG
CTATGATTGTAGcatggatgttttttttgtgtGTGATACATGATATAGGC
TATTTTCTGCTATTTTTGCTCGTAGTTGAGCGATTTTCTTGATCGCGAGG
AGAACAAAAAACTCTGCGTAAAGTTAagcttttttcataaaatattctAA
GCGCAACGATTGAAGCCATTACCAAGTTGATTATATCCTTTGAGAGTCTT
CAGGTGGTACCTCTATAAAGTAGTCAACTACTTATCAAATCTACTGGgaa
tcaatacaccttttcgaccgtagtcgcacagtcaggcgcgtgccacttta
ttatttaatttaccaccctaaactcgatcgcgcggtaattggcggctacg
gttgaaaaggtgtattaccatagcaatattttgaaaacgagtaAGCGTTG
CTTGCGACACAATTTATGAAAACGAGGTCTTATTCTTGAAAGGTGTATTT
TTGGATATTTGTATTGCATGGTTGCATCGTTGTTTagttaaaaatctaaa
aaaagaaagactCCACGTGtcaattatttttgtaaatttttatgaTGAAG
GCTTGTGTAATATTCCATTGAAGAGTTtgtaacttaaaaaaaaattacag
cgCAAGTCAGCAACGTGTGGTTTAATAATTGATCGATAATTAATCTCCTT
AGATGGAGCTCGGTCAGAGATTAATATAATGGTCACATGCAGGGTCATAA
CAACatgtaattttgaatttaattttaagattttagccAACAAGTTGGAT
TACTGTACGGTTAAATATAATCCATTTTTagatataattttcttttttga
aaagacacccctgtgtcacagacccactaggaccccagccccactagaaa
atttgccaaaaatctcgtccccggtgggaaaatagtATTTCAGTCCCGCT
GGGAGAACGACTTTGATTTCACCCCAATTCGAAATTCgatgtttaaaaat
tttactcCAAAACGATcctactggattttttaaccttgggacaatagaat
ttctatctccATCGGAATTCAATAGGAATGTTTATCCCCctgagaaaaaa
gttccagtggggctgtgagacaggggtgtaaaaaggtaaaaatacactct
tttctttataagaagaGTGAGTCTCAAAAACACCAAGATTATAATTTAAG
AATCATAATTCTCCAGACTAGAATGACTGATTTTCAGGCAAATCAAGagt
taaagtagtaaaataatGTTCAAATTGTACACAGAATTCCATAAAAATAA
ACTCCGGTAAATTGTCATGGGTCAGCCTTTCTtatatctaacataaaatt
taaaagagtatatcctagtaagtgcgagcgcaaacacaaacaaaatcggg
aaatcaaaccggaaaaatcgggaaatcgaaccCGATTATTGCGATTGATC
ggatttacgcacaattacaaatgaaaaacactgattttaacCCATTATCA
ACATTACCATGTGCTTCAGAAGGATGTCTTCATACTTTACTTTactttaa
gagaagaaattttggcaaatgagCCCATTCGctaattttggtgcaatttg
gcgGATTTTATTTTGGTGATTTAATAAGATTTCTAAATTTAGCGAGAATT
AATTCTTGTGAACGACCCATTTTTATCTCAGTATTTTAGCAgggaaaaga
ggaaaaaaaaggtttttaggaGAAAGAGAGactaaattaaaagaaaatta
aatttggcgaggatttatTTTGTCGAATGACctacaaatttaaatttttt
cccttaaggtatgttAAACTAGCTTAAGTCGGTCAATTCTATCCATTGcc
ctttttctcattttttgctAATGTGGACCATAGCTGTTCCAAGTTCTTTG
TAACAACCCTGTGTCACAACCCGCCCCATCTGAAAATTGGGCTAAAATTT
TGTCCCCCCTGGGGAAACAATTTCAACCCcaatgggaaattgactttgat
ttcatccccattagaaattcaatagaaaaaattgcacttcaaaactatcc
ccactggatttttcaagcttggaacaatagaattcctatCCCCATTGgta
tttcgatagaaattttcatattCACTGTAGGAGAAAGTTTCacctgtgag
acaggggtgttttggtgtttctgACAATCTTACAAGTATACTtgttgtca
aatttttcaatatctATCAGGCtgtttacttttgatttttctagtTTACC
ACCTGGTCTTCCTAAAGCGATTAGCATTCCTATATCCGCATGCAAAAGTT
ATGAATTAATtacaatttacaaaatttttgaagccttcggatgttcttta
ctgtttgagttttaagcctaacaatcttgttaacatgttcttatttttca
caattttgcattttcctaagaaaatgggTGTTTCAGGATCTACAAAGCCT
TAATATGTTATTgaatcgttcttataaaaaaacgtgtatttcacgAAGCT
TAAGTAAATGGCAAGCTGTAAATAGAAGAAATATCAAagtaagaaaataa
ttttaagcTTGAATATCCAGGCTATCCATTTGACGACAAGATCCAATAGC
GATGCAAAAACAAAGTCGTGGTTGTGTCCATTATGAGTTTAAAGCCTGGA
GAGCTAGAGGAGAATCTCTAAGCTTTCCCTTTTCCTTtccttatttccca
tccagaacgcacctagaacgcgccgtaatcatgacggcGGATTGTATCTA
ggggttcctttgtttttgaggactgcatctTTTGAAATGTaacgatagat
tttactttcaatccagagcgtttgtgtaaaaaccacgcgcgggcgttctg
gattaGAAATAATTCATTTCAAATCGTTCCCCATTTAAGAGTCttgagtc
tagcccttcgggcttagaaaTCTATGGTTGTATCCATATTCctaattttg
aagttttgataCTCCCTCTCAGAGACTTTTGTGAGTCCGTCCCGAATCAT
AAATTAATACAATTATCTGCAGGTCGGCGTGGAGAATTAAACGATAAATA
ATCTACTTTTACATAACAATAGCTGTGATTCAACATCTTAATTCCCATAG
GAATTTATTTCCATCGATGTTATCTCAATCGAACCATCTCTATTCCCGTA
GGACGTAATCTTCACGTCTCCCGTGAGGTTTAATTAAATCTTAACTGTct
aatatctttttattcagttttgtctttaaaaattGGTACATGTGCATTAG
TTGGTACAGCATTCAGTTGTAGTTAAGACGTTACAAGCTTGGAGAAGTAC
AAACTGAAATCATGTTAAGAACAGCCATTTTCTTGATCTGTGCTGTGAAC
GTTGTGGTTGATGCAACAACATGCCCGTAAGTCACTCATTTCGTTGGAAG
AATCTTGTATTGAAATATCCTTTTTATTATACTTTCCGAGTTCGAGTGTA
CAAAGACGTTTTTCTTTTAAccctttcttttgatacatttttcaCCGGAA
CGTTTCATACTTAAAAAGCCCAATACTTTGCCTCCCAACAAAGTCCATCG
GGATGAGGTCAATAGACAGCCTAATTCTCGATTTTCTAAAAGCTTGGTTC
TTTTCGTTATGAAAAGATGACAATTTCAACAGTTAAAAGATGGTATTGAA
TTTGGACAGTTCTGGAAAAAGAATGTCCATATGATCACTTTATACAAATT
TGTCTTATGTAATGACACCCcgtatttcttttttctcagaACCCTTGGCA
ACGCCATCACACAAAAAGACATTTTGCATGCAGTCCGAGCATCCCAAGAA
GTTTACAATGACAATGTGGTCGAAGGATCAACTATCAACCAAACTCCTTT
CACAGTTGTCaagaaaattcatgaaaatttacACACTGATGCTGGAATAA
GAGTTTTAGTGGCTGACCATGGGAACACCAGAATGATCATCTATAGAGGA
ACTGACGGGTAAGTATGACAAGTTCGTTTGCCACCTCTTCAAGATCTGTT
TTTGGTAGAGTTATTTCTATTGATTGACATCCAAATCACAATTTAGGTTC
AAATTAAGAACCAAATTTGGTCCGATGTgccaaaaaaaaagacaaactcA
ACAATTTAATTGCGGAAATGATAATTACTTCTTTTGAGGTCTGCTGTCAT
TCTCAATGCATTTCTCCCGATGAATCTTGTCTTAGATATGAACGAAAGTA
ACAAAATCTTGATTTATTTTagattctttcaaaatttttatcaaattcta
tTCCTATGCCTACCGACGATGAATTTAAACCTCATTTTTACAGTGGAGCG
CAACTTCTCATCGAAGGTGGAAGCGTGTTTCAAAGGAAAACCGTTGTTCG
GTACGGAAATCAAGACGTTAAAATCCTGAAATTCTTCTGGGAAGCTTTTG
AGCTTGTTTCGTACGGTTTAAGACCTTATATCACGGATCCATCAAAGAAA
TATATTATTACTGGTCATTCTCTTGGTGGTGCTATGGCTTCGATTATGGC
TCTCAATGGAACACAATTGTATCAAGTGAGTTTAATAAAAACGACATTGA
AGTACTTTCCAAATTTGTTCTCTGATATATTGTGGACTTGAAAAAGGAAT
TAGacaaaacactttttggcaaatgatatatttttcagatcCTGGCCTTG
ATATTCAAGAAGTAAATGTTTTATGAGGTTTAGATCTTgtctctactttc
caactgcagcttaaggcgcttaaaaatcatttgtggtgttaaAAATTTCG
CCGGGAAGTCCCCTTTGTTTCAAATATattgtccatgattgtacttCAGG
CTAAACTTTGCATTCTGATGTAACCGAGTTTGGTGAATTTATATTAATCG
CATCTTCCATTCTATATAGCCTAAGTAGCCTTCACACCTTTATGTCTTTA
CTTCTCAGGGATCGATGTGGGCGAATCCTCAATCAAGTTTGATTACTTTT
GGTCAACCAAGAACAGGCGAACAAACATATGCCAACCTACATGATTCTTT
GATCTCCACATATCGCAAATTACGTTTTGTTTACATGGGTGATATTGTTG
CTCGAAATCCAGGACATGAATTCGGATGGCGTCATCATTCAAGGTAGGAA
TACCAAGACTTGATGCAATGATTCTTTATCTTGTTTggcgtcaaatattt
ttcttttgtcaacaacactaacacccctgtctcacagcctcagtggaact
tttttcctcagtggggataaaaattcNAACTCGATGCAATGATTCTTTAT
CTTGTTtggtgtcaaatatttttcttttgtcaacaacacgaacacccctg
tctcacagccccagtggaacttttttcctcagtggggataaaattcctat
tgaaatcctaacggggatagaaattctattgctcaaaagttaaaaaccca
gtggggattgttttggagtgcaattttaaacatggaatttcgattgggga
tgaaatcaaagtcgattTTCCAGTGAGACTGAAATTTAAGGGTATTTTCC
CagtggggacgaaatttttacttagtttccagtgggtctgtgggTGTGTG
ACATAGGGGTGTACACTATCACTGATTAAGCTATTGAATTGCATTTATCT
CTGTCCAAAAGAGCCGTTTACATGGGCGAAGAGAAAACTGGTGGTTGGTT
CGGTGGTTGGTTTGGCGACGAAATGGAAGACCAAGATATGAACGCAATTG
ATGAAGAGTTAGAAGATTTCCTTGACTCAGATGAGGATGAAATTCAAGAT
GAATTCGAGACTACAGAGGACGAAAACGAGGCTGAANGAAACTGTGTTTA
GTATTTTGGGaattacacaatttttttttttataagaacaaactatataa
gaacataaggcttcaaggcccaaaaatttaagaacattctaagaacatcc
taaggctttggagacttaaaaacatgcattttcttaagaaattacatcga
aatgctcaaaaaaagctgaaaataagaacattttaagaacattcttaggc
ttcaaatccaaaaaactaagaatatccgaaggcttcgaaaatttttgacg
ttcttataaaaaaaaaacgtgtagcaaagttctttaatgacttaaaaata
acaaaggtaatataagttcatgcttatcttttcaataaaaacaattatac
tgtgatttgacttcgtttcgaaataatcaatgataccaataataccaatg
cacaaacacttaacattttccaacttttaattgcactgttcaaaaaagat
aacataaccttcgtttttagtaataagttagagatttgatatttcacaga
aaagtgctaccaaggggcgTATTTCGGATCCCAAtacttccgaaggactt
ttctgtttgccttgaaatttaacaaacttcttaacctaaggttgaaccac
cactggtgtaaaaatgaacgttatagcatNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNttgtccatgattgtacttCAGGCTAAACTTTGCATTCTGGTGTA
ACCGAGTTTGGTGAATTTATATTAATCGCATCTTCCATTCTATATAGCCT
AAGTAGCCTTCACACCTTTATGTCTTTACTTCTCAGGGATCGATGTGGGC
GAATCCTCAATCAAGTTTGATTACTTTTGGTCAACCAAGAACAGGCGAAC
AAACATATGCCAACCTACATGATTCTTTGATCTCCACATATCGCAAATTA
CGTTTTGTTTACATGGGTGATATTGTTGCTCGAAATCCAGGACATGAATT
CGGATGGCGTCATCATTCAAGGTAGGAATACCAAGACTTGATGCAATGAT
TCTTTATCTTGTTTggcgtcaaatatttttcttttgtcaacaacactaac
acccctgtctcacagcctcagtggaacttttttcctcagtggggataaaa
attcttattgaaatcctaacggggatagaaattctattgttcaaaagtta
aaaacccagtggggatagttttggagtgcaattttaaacatggaatttcg
attggggatgaaatcaaagtcgattttccagtggggctgaaatttaaggg
tattttcccagcggggacgaaatttttacttagtttccagtgggtctgtg
ggTGTGTGACATAGGGGTGTACACTATCACTGATTAAGCTATTGAATTAC
ATTTATCTCTGTCCAATAGAGCCGTTTACATGGGCGAAGAGAAAACTGGT
GGTTGGTTCGGTGGTTGGTTTGGCGACGAAATGGAAGACCAAGATATGAA
CGCAATTGATGAAGAGTTAGAAGATTTCCTTGACTCAGATGAGGATGAAA
TTCAAGATGAATTCGAGACTACAGAGGACGAAAACGAGGCTGAATTCAAA
GCACTAGAAGCATTAACATTGAAAAGTGTTGAGGATGAAGAAGTTCAAGA
TTCCAACATGAGAAAATTCTGGACAATCTGTTCAACGCAGAGGGCTTACA
AATGCATCACTTACTTAAAGCATTTTATACCCAGTATCAACCATCATGCT
ATtgctaattatgtcaaaagtgCCGAAGAAACACATGTGTTTAGAACGAT
GAAAGGAACAGAGAAAAGTAACTTTAATAGAGCTCTCATCGCTGCTTGCC
AAGAATTGGAAGGGTAGATTTTGTCTCGTTTGTAAAATCGTACAATATTC
GATAAATGAAGTTTTCGTAGCACTATGAATATTATTTTGCACACAATTAA
AGATAATATGACATGAATTCAATAAAATACTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004902XLOC_004902Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008742-exon-sc0000087-1491911889:521510..521620TCONS_00008742-exon-sc0000087-1491911889:521510..521620Clytia hemisphaericaexon
TCONS_00008742-exon-sc0000087-1510915933:521510..521620TCONS_00008742-exon-sc0000087-1510915933:521510..521620Clytia hemisphaericaexon
TCONS_00008742-exon-sc0000087-1575043694:521510..521620TCONS_00008742-exon-sc0000087-1575043694:521510..521620Clytia hemisphaericaexon
TCONS_00008742-exon-sc0000087-1491911889:522074..522292TCONS_00008742-exon-sc0000087-1491911889:522074..522292Clytia hemisphaericaexon
TCONS_00008742-exon-sc0000087-1510915933:522074..522292TCONS_00008742-exon-sc0000087-1510915933:522074..522292Clytia hemisphaericaexon
TCONS_00008742-exon-sc0000087-1575043694:522074..522292TCONS_00008742-exon-sc0000087-1575043694:522074..522292Clytia hemisphaericaexon
TCONS_00008742-exon-sc0000087-1491911889:537053..537284TCONS_00008742-exon-sc0000087-1491911889:537053..537284Clytia hemisphaericaexon
TCONS_00008742-exon-sc0000087-1510915933:537053..537284TCONS_00008742-exon-sc0000087-1510915933:537053..537284Clytia hemisphaericaexon
TCONS_00008742-exon-sc0000087-1575043694:537053..537284TCONS_00008742-exon-sc0000087-1575043694:537053..537284Clytia hemisphaericaexon
TCONS_00008742-exon-sc0000087-1491911889:537668..537852TCONS_00008742-exon-sc0000087-1491911889:537668..537852Clytia hemisphaericaexon
TCONS_00008742-exon-sc0000087-1510915933:537668..537852TCONS_00008742-exon-sc0000087-1510915933:537668..537852Clytia hemisphaericaexon
TCONS_00008742-exon-sc0000087-1575043694:537668..537852TCONS_00008742-exon-sc0000087-1575043694:537668..537852Clytia hemisphaericaexon
TCONS_00008742-exon-sc0000087-1491911889:540129..540692TCONS_00008742-exon-sc0000087-1491911889:540129..540692Clytia hemisphaericaexon
TCONS_00008742-exon-sc0000087-1510915933:540129..540692TCONS_00008742-exon-sc0000087-1510915933:540129..540692Clytia hemisphaericaexon
TCONS_00008742-exon-sc0000087-1575043694:540129..540692TCONS_00008742-exon-sc0000087-1575043694:540129..540692Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000087supercontigsc0000087:521510..540692 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
162.823	173.506	113.976	96.4831	4.69166e-09	2.15078	4.94503	4.71755	4.77144	4.28105	14.7751	2.30879e-05	1.239	0.722788	3.21588	1.10538	0.842726	1.51499	2.95367	1.05786	8.93582	4.38116	100.292	99.1029	7.57328	8.0271	22.6701	29.3688	23.6269	27.8297
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008742 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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