TCONS_00008691 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008691
Unique NameTCONS_00008691
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2190

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008691 ID=TCONS_00008691|Name=TCONS_00008691|organism=Clytia hemisphaerica|type=transcript|length=2190bp
CAGAATTTAGGCAAAATGCCAATGCAGAAAACTTATAAAAGATATGCCTC
CCTTGGCTCATTTGGTGTGGTTGGTAGCACACGTTCTAACTTATTGATGA
TCAATCAGATCCCTTATTTATCACATTCGAAGAAAGAGAACACAACTTGT
TGTGTGACTGCAGCTTTAGAGAGTGTAATCATTTGGGATGTTAGAAGAGG
AGAGAAGGTAATTTTGACCTCTTCTTATTTTATAGAATGCTGTATAGCTT
TAAAATTGTACTTTTTAATAAGTAcattaacttttttaataaataagAAT
TGCCACTAATTGTAGCCTCAAATTGTTCGCATTCTGGTCTTATGTTTAGG
ACTAAGATCAATTACCCTAGGCTTACTCTAATTTATACGAATTTTACCCT
TAATTTGCTTAAAGTTCTGTAATTCCAGGCCCAACTTTGTTCTCAAAATG
ATCCTTAATCCTATGGCCTTTTGCGGCCTTATTTTTAAGAAGAGcattta
tatatttattatttctaaaaattattgttttaaaaattttcatttagatt
gcttttttgaagggcAATGAGGATGAGGTTACATCAATTGCCCATTCTAA
AAAAACATCACTCATTGCTGTTGGTTACAGCAATGGTACAATTAAGTTAT
GGGACCTTAAAAACAATACCAGTGATGTGTTATTCAGTGGGCACAGATCG
GCTATTTCTTGTTTGTGTTTCGAGAAATCTGGCACAAAGCTCATCTCTGG
ATCCACAgataCTGATATTATTGTTTGGGACATAGTCGGTGAAACTGGCT
TGTATAGATTGAAAGGACACAAAGGAATGATAACTGACTGTGTTTTCATG
ACCACGCACAATGTAATGATATCAAGCTCCAAGGACATGCTTGTTAAATT
CTGGGACTTGGACAATCAACATTGCTTTTTAACAATAGTTGGCCACAAGA
CAGAGGTTTGGAAATTGTGCTTATTGAACAATGAAACAAGGCTTATCACT
GGTTCTGGTGACGCTGAGTTACGATCTTATGAAATTAAAGAGGCTAGTGA
TAAAGAATCTTCAGGACTGTTGAGTTGTGAATTGCTTGGCTCGATTTTGA
GAGGTGGAAAAGGACGAGTCATCTCATTATATTTAGAAGAAAAAGGGCAA
TACTTAGCATGTCATGGTGTAGATTCAACATTAGATTTATTTGAAATTGT
CGATGAAGATGATATACAAAAAGCTTTGAAGAAAAGACgcaagaaaatta
taaaaaagcaaaagaaaatgcCAGAAGCAGAACAAATTGACGAGGATAAG
ATATTGGTGGAGCGAGAAGTGACAGATGAAATTAAGAAGGTCCAGTCATT
CAGAATGTCACAAAAATTAAGATCAGCCGCAATATCCTACAATAATACCA
AAGAAGAGATCAAAGTTTTGTCTATGTTCATCAATAACTCGTTTGGATAT
TACAAGATCGACTTGAGCGCTCTCCCTACAAAATGTCAACTGCAATCCTT
GATTTCAAACATGGGTCACCGTTCTGATGTCAGGACAGTGGGGTTCAATT
CAGATGCTACCTTGATAATGACTGCTTCTGGAGAAAGTGTCAAAATTTGG
AATAGgagtACACAAAAATGTATACGCACGATGGACTCtgattattgtct
ttgttcaaTGTTTGTGCCTGGCGAACGACACGTGATCGTCGGAACAAAAA
CTGGTAAATTGCAATTGTTCGACATCAGTTCTGGAATTCTCTTGGAAGCT
GTTGATGCACACGAAGAAGCTGTATGGAGTATTGCACTTTCTCCTGATAA
AAACGGGTTTGTATCAGGAAGTGCTGACCACGAAGTCAAATTTTGGGAAT
TCGATTTGATCATCGACGAAGAATACTCCTCAATGGGTAAACGGCTAAGT
ATATCACACACTCAGACATTGAAAATGACAGAAGAAGTTCTTGCATTGAA
ATATAGcCCCGATGGTCGATTCTTAGCCGTGTCTTTACTGGACAGCACag
ttaaagttttctttgctGATACTCTAAAgTTCTTCTTATCATTATATGGA
CATAAGTTTCCTGTGCTTTGTATGGATATCTCGCTGGACAGCACACTTTT
AATCACTGGATCGGCtgataaaaacatcaaaatttgggGATTAGATTTCG
GTGATTGCCACAAATCCATATTTGCCCATGATGACAGGTT
Run BLAST on NCBI

transcript from alignment at sc0000087:29599..39781+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008691 ID=TCONS_00008691|Name=TCONS_00008691|organism=Clytia hemisphaerica|type=transcript|length=10183bp|location=Sequence derived from alignment at sc0000087:29599..39781+ (Clytia hemisphaerica)
CAGAATTTAGGCAAAATGCCAATGCAGAAAACTTATAAAAGATATGCCTC
CCTTGGCTCATTTGGTGTGGTTGGTAGCACACGTTCTAACTTATTGATGA
TCAATCAGATCCCTTATTTATCACATTCGAAGAAAGAGAACACAACTTGT
TGTGTGACTGCAGCTTTAGAGAGTGTAATCATTTGGGATGTTAGAAGAGG
AGAGAAGGTAATTTTGACCTCTTCTTATTTTATAGAATGCTGTATAGCTT
TAAAATTGTACTTTTTAATAAGTAcattaacttttttaataaataagAAT
TGCCACTAATTGTAGCCTCAAATTGTTCGCATTCTGGTCTTATGTTTAGG
ACTAAGATCAATTACCCTAGGCTTACTCTAATTTATACGAATTTTACCCT
TAATTTGCTTAAAGTTCTGTAATTCCAGGCCCAACTTTGTTCTCAAAATG
ATCCTTAATCCTATGGCCTTTTGCGGCCTTATTTTTAAGAAGAGcattta
tatatttattatttctaaaaattattgttttaaaaattttcatttagatt
gcttttttgaagggcAATGAGGATGAGGTTACATCAATTGCCCATTCTAA
AAAAACATCACTCATTGCTGTTGGGTAAATACTCATTAAACATCAGTGCT
ATAGAAACTATATTTGTTTATAATGAAATCTGATTTTTGCTAGCTGATCT
ATGGTAACAATGTTATAATACCGGTTGAcccagaaaaaagtaaaagGGTT
TGATGGCtaactgttttcaaaaaatatacagttgacgctctctaatttga
cgttctaTAATTCAATAAGCTCCCCTTTTCAATCAAATCGATAGTCATCG
tcaaatttcttaagaaactctcataaaaaaCACTCTACTATTCTACATTC
TATGTTTCGATAAGTTcccattttcaatgaaaatttgaagtccctTCAAG
GTTTTCTGCTCCCTAATTCAATTTCTGGCATTTATGGttgatttcttttc
aaatttttgaatttttttgtccaaacattcaaattttccaaaacgaaatt
taaaacaaaaacagacaGTCAGAAGATGTTAGCCTAAAAACTCGAGTCTT
ATCTATACTTTCCCAGCTCTATAATCTGATATTTGCCTTGTTTTATTGAA
TTAGAGAGACttcctactattcgatacgctcctgTATTTGATGAAATTgg
aattccccttgaaaatctaATTAGTGAGTGTCAACTGTAAtaacttttga
tgattttttttttatcattgtaaagtggaaaggcaaacttaaaacttggt
atataactttttaaatttggttgaGTGGTTCTCAAATTGTAAGCTTTgga
agtcaaaatttagtttgGGAAAAGTCCAAAAACACATTAAAAATGGGGTa
tcaaattaatgcaattctatGCAGAAAAcctcttattttcactattttga
tAACTTTTACGACTCAATTAAAGCTGATTTTTATAAATTATCCTAACAAA
GAAAAGTTATGGCGAAAATTAGGAAATCAGTTATTATgagcgatttaaaa
aaatatttagtgaaaaatgttaaaaaatgcttaatttgattttgattcgt
ttttggactttttcaaaagtgacttttgactttaaaagcttataacttga
gaaCCACTGTACCAACTTTAAAAAGCCCCCAGTAGTAATAGTGTTATCTC
TTTTGAATAATGGTTTGAGATATTATATTATAATCGTCTTGAGCAAaacc
ttttttctcaaaagtttcCAAAGTTTAATATCCAAGTTTAAGTATTTGTT
GCATGTCCCTGATCTTTGTAATTTATAATGGTGTTTTCTGGGCctatcaa
aaatttatttatttcattatatttgttgATTATTTCAATACTTCAAGAAT
GATGGTTTACATTATCAGtgattttaaattaaaataatatttccATTTTT
AATAATAGTTACAGCAATGGTACAATTAAGTTATGGGACCTTAAAAACAA
TACCAGTGATGTGTTATTCAGGTTGGCCATTTTGATTATCTCTTCTTGCA
TAGTACCATCAACtaaatatttgtttatttttaactGTTAATTCAGACTC
CTACACTTGAGGAATGTGATAGCAGTCATGTGCTTGCACACACATGCCTG
AAATTTCCCCAGGGGTGTGATCAATCACACAACAGAAATTTAGATCCCCC
CATCCTGTACTGCACACTTTTAGACAGCACTCCTTGTCACAATCCCTAAT
CTCAAAACTAACAATAGTAAAAAGGTAACTCTTACCAGATGTATGTATAT
ACTATGTAAATGACCCAGTTACCAGCacatctaatttttttttttttaat
atcatATTATTGTTTTAGTGGGCACAGATCGGCTATTTCTTGTTTGTGTT
TCGAGAAATCTGGCACAAAGCTCATCTCTGGATCCACAGTAAGCTAGACA
TTAAATTATAtgattgactttaaaatttagaaaactaATGAAATGTGTAA
TCACTGGGAACTGTTTCAAACTGTTAAgggttttttttcaagtcatctat
tataaactacttttttttttttttaggataCTGATATTATTGTTTGGGAC
ATAGTCGGTGAAACTGGCTTGTATAGGTAATATTTCACAAAAGGCATAAT
GACGTAGATTGAAGGAAGATAGAGAAATTTCTTTGTATTCATTAAAACAT
TAATCTAAGGTCTTTCCTCTAAACATTTTTTGCATTCTCGCGGGCAACCT
TCCTAATTTAGCTAGCAGCATGAGAttgttatttataaaaaatttattca
ttaaACTTATTTAGATTGAAAGGACACAAAGGAATGATAACTGACTGTGT
TTTCATGACCACGCACAATGTAATGATATCAAGGTAAAATGGCTCTCaaa
ttattattaattataCACTGCCACATTAATCATAATGCTTtgctttgaaa
agtttttattcAATCGATATCTGTACAAAAATTAGCTGCTTGaataaatt
tttcgaatttGTTCTAGCTCCAAGGACATGCTTGTTAAATTCTGGGACTT
GGACAATCAACATTGCTTTTTAACAATAGTTGGCCACAAGACAGAGGTAT
ATCTCCCTTTTGATaagtatttttcaaattatttgatAATTCTAAAATAG
ATTGACCTCAAAACTGCTGGATGATAAAGAAGTTTTTCAGGTTATTTAAT
CTACAAAATTCTGCTATTATAGGAAAAATTGAGCAAATTGAATCTTTTCT
TCCATAAAGGAGAACCTGCAGGAAAAGTTACATAGTTTTAGTCAAACTAA
AAATTGTTGCCTTTTTATAACAATTCTTTACAtaataatattatattgtt
ttttaaattgtaaGGTTTGGAAATTGTGCTTATTGAACAATGAAACAAGG
CTTATCACTGGTTCTGGTGACGCTGAGTTACGATCTTATGAAATTAAAGA
GGCTAGTGATAAAGAAGTAAGAAAATTATTTGTCCAGTTTGATTTTATAC
TCCTTTTTAGATCTTAAAACGTGGGATTTTTTCTGCCTTGGTCAAGTTTa
taaaaagtacattttttGTCTCAAAGTTATTAGAATTTCGAAGATTCTAT
ATTTTCAGGCAACTTGTATGAAAATTTGACATTCAACATACTCttctaaa
agaaattaaaaattggaaattttctcATACTTTTAGTCTTCAGGACTGTT
GAGTTGTGAATTGCTTGGCTCGATTTTGAGAGGTGGAAAAGGACGAGTCA
TCTCATTACATTTAGAAGAAAAAGGGCAATACTTAGCATGTCATGTACGG
ATACTTTATTTTGTCTTGcttatttggtatttttaaacATATATTTTGCT
TCAAATTCAAGCCATTGaactttctaatattttttctgaACTTAAGCTTA
TTAATTAAATTTGATAGGAGTTCTTTTAAGTTTTAGCATAATTTTCTATC
AAAACCCTTCAATAAGAATTATTGAAAAATCACTATCACCGTTACAGTAG
AATCCTGGATTTCTTGCCCGCTGTCTAATTAATACAATGCATATTTTATT
TTAGGGTGTAGATTCAACATTAGATTTATTTGAAATTGTTNTTTCAGGTT
ATTTAATCTACAAAATTCTGCCATTATAggaaaaatcaatcaaattgaAT
CTTTTCTTCCATAAAGGAGAACCTGCCAGGATAAGTTACATAGTTTTAGT
CAAACTAAAAATTGTTGCCTTTTTATAACAATTCTTTACAtaataatatt
atattgttttttaaattgtaaGGTTTGGAAATTGTGCTTATTGAACAATG
AAACAAGGCTTATCACTGGTTCTGGTGACGCTGAGTTACGATCTTATGAA
ATTAAAGAGGCTAGTGATAAAGAAGTAAGAAAATTATTTGTCCAGTTTGA
TTTTATACTGCTTTTTAGATCTTAAAACGCGGAATTTTTTCTGCCTTGGT
CAAGTTtataaaaattacatttttgtctCAAAGTTATTAGAATTTCGAAG
GTTCTATATTTTTAGGCAACTTGTATGAAAATTTGACATTCAACATACTC
TTCTAAAAGAAATTggaaattggaaattttttcatacTTTTAGTCTTCAG
GACTGTTGAGTTGTGAATTGCTTGGCTCGATTTTGAGAGGTGGAAAAGGA
CGAGTCATCTCATTATATTTAGAAGAAAAAGGGCAATACTTAGCATGTCA
TGTACGGATACTTTATTTTGTCTTGcttatttggtatttttaaacATATA
TTTTGCTTCAAATTCAAGCCATTGaactttctaatattttttctgaACTT
AAGCTTATTAATTACATTTGATAGGAGTTCTTTTAGCATAATTTTCTATC
AAAACCTTTCAATAAGAATTATTGAAAAATCACTATCACCGTTACGGTAG
AATCCTGGATTTCTTGCCCGCTGTCTAATTAATAATACAATGCATATTTT
ATTTTAGGGTGTAGATTCAACATTAGATTTATTTGAAATTGTCGATGAAG
ATGATATACAAAAAGCTTTGAAGAAAAGACgcaagaaaattataaaaaag
caaaagtaaaaagttttttaaaatgaaaaatctatGTTTGAAATCGACGT
CCATAACAGAGAAATCCAAGAGAGAAATCCAAATCTctgcaaaatatttt
ggaatgaagtatacattagtaaaataagaATACTGAAAATTTTGGTCGTT
ACAAAAAGCAGAATCTGATTTATTCCAAGTGTGAATTGATTATTGATTGG
TTCATTATTCCTTGATTTTAAAAGCAGGGTATAATCTGgtataatatttt
gttttttaggaaaatgcCAGAAGCAGAACAAATTGACGAGGTATTAACAA
GGAAGTTGAAATCTCAGCAAAGTTTTTTCAATAGAGATTATGCATTTGAA
GAATAATAATATACAAATATGACTTGCAATTGAAGAACAatcaattttga
catttttccaAACTTTTTTACTAGGATAAGATATTGGTGGAGCGAGAAGT
GACAGATGAAATTAAGAAGGTCCAGTCATTCAGAATGTCACAAAAATTAA
GGTAtgttttcttgtaatttttttttttcgccaATCAAACTTCTTTTTGT
ACAGTAAAATCTGAAAGTTTGACATTTCACAATTGACCTTCAATCTTATA
CTTATAGGATATTATAgtacaaatcaaaacattgagtcCTTCAAAATGAA
TACCTTTCTAAATTCATAGATCAGCCGCAATATCCTACAATAATACCAAA
GAAGAGATCAAAGTTTTGTCTATGTTCATCAATAACTCGTTTGGATATTA
CAAGATCGACTTGAGCGCTCTCCCTACAAAATGTCAACTGCAATCCTTGA
TTTCAAACATGGGTCACCGTTCTGATGTCAGGTACAAATAAGTTGGAATG
GTTTTtcagaataaattttttttcttacataTAAAAAAGATACTGTATTT
CTGACTaaccaaaaataaggtaaattattaaaaaacgtTAATCCCATAAC
TTTGTGCGGCCTCCTTACCCTTTctgtgccgatgtcgtatatatccgaca
tgcaaattttcactctacttgccaatgtcggatatatccgacatcaaatt
tatttttttttatatccgacataaaaaaatccaaatagtAATAGTGACAG
TATATATTAAGTGCTCAAAAGATTTATTTCAGGTTTATTTTAGTCTATCA
TAAAATATATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGGGATTTAGGTATAAATTA
TTGGGATTTAGGTATAAATTATTGGGATTTAGGTATAAATTATTGGGATT
TAGGTATAAATTATTGGGATTTAGGTATAAATTGGGCATTTCAACCAATT
GCCTCAAGACTCTATGTTTGGAAAATAACAGATTATTTTATCCCTCTATT
CAATATTCAGGACAGTGGGGTTCAATTCAGATGCTACCTTGATAATGACT
GCTTCTGGAGAAAGTGTCAAAATTTGGAATAGGTATATTAAAACTTCTTA
TTATCAGCCATTGAAAATCGTGAAGCTCAACAAGAAAtagaaaattgctc
aaattggTGAATGGTTGAAGACACTCTTAGCTCGTTATTAAACAAGTGTT
TCCAGTCCCTGAACGCGGGCTTAGTATGATTGAGTGTAAGCGGtgtaaaa
cattttcacatcTCCGTCATGCCCTTTTTATAATGCAATCAAATGCTAGC
ACTCGCTCTGTAGTTGTCTTCTGACCAACAAGCAGAACCATTAGAAAGCC
AATGATCCAGCATAACTCAAACTTGCAAATCATGCCATTCGCCGACATtt
gctttattttattttaaattttaacatctaatttttttttcaggagtACA
CAAAAATGTATACGCACGATGGACTCtgattattgtctttgttcaaTGTT
TGTGCCTGGCGAACGACACGTGATCGTCGGAACAAAAGTAAGTCGGGTTG
TCCGAAAGCAATCCAATTTTTGTGGACAATTTGAAACTtattaatgaaaa
tttaaagCTTTCAAAGATTCAGaatttaccttattacacgaatattacta
gtcaatTTATTaaaacgaattgaaaaatttcgtgttaataaaaaaccctt
aattaaaaccagccgtggtctccttaaaaaagcattttttgcgTGTTAAA
TTCAAGGaagttgaatacttgcctagtaatatttgtgtaataaggtattt
ggAGGTCAACCCTTTTTTTATACATGAAGATACAGCAAGATGTCACTAAT
TCCCAGTTCAGAACTCCCGAACCcccaaaatgtgaaaatattAGAACCTT
AGCTTTAGAATCATTAACCCACAACTCTATATAGCAACATTTTTACTGCA
TCCCATAGGTCTAAAGaatgaaatctaaaaatttattACTCAAAATGGGT
ATTGATTTGAAAATGGCTTTTAGTTTCTTGACCAGAACCTTAGGTGAAAA
AAGAAGTTGTTTGACAGGATGTAGAAATTTGTTGTATTGAAAATCTTTTC
TGTTTGAGATAAAGGGCTATTAACAGGCGCTGTTTTCAAACACCCTCTAA
ATAGTAGTAGCACTCCCGTGTCTCTTGAGTTTCAGCTCAACAGTGAAGAC
CTACTGTAAATAATCAGTTGCTTTTAAAACTGCCAGTTGCAAAACAAACA
GTGATAACACTTTGTCACCATTTTTAGACTGGTAAATTGCAATTGTTCGA
CATCAGTTCTGGAATTCTCTTGGAAGCTGTTGATGCACACGAAGAAGCTG
TATGGAGTATTGCACTTTCTCCTGATAAAGTAAGTCTGTATGACAATGCT
GTCAATTTCTTAATACAGTGGAGTGTCTTGAATAAGTTAAATGGATGCAT
TCAATACACTTTACTTCATTACATTTGTTTTCTTAAACCTCGATAATTAC
TTTCAGTTTATCAAATACATTCcgtgttgttgttgtttctcAATAGAACG
GGTTTGTATCAGGAAGTGCTGACCACGAAGTCAAATTTTGGGAATTCGAT
TTGATCATCGACGAAGAATACTCCTCAATGGGGTACGGTTTTTTtatata
ctctcgggtacctaatagccgggggatttggaataagcgggggtggttgg
aaaaaatcgaaaaacttatgtaataagcggggggagttggaataaaaatg
tcctgggtggaaaatttttgaaaaggaggctaatacagcagaattaggac
aaaagagggaactttcaaaaatatttttccaaaaattaataagcgggggg
ttggaataaaaatgtcctgggtggaaaatttttgaaaaggaggctaatac
agcagaattaggacaaaagagggaactttcaaaaatatttttccaaaaat
taataagcggggggctggaataagaatgtcctgggtggaaaattttcgaa
aaattaattagcagggggggggacggctattaggtacccgagagtacctt
tgattttttttctcaatattcTTATTTCCACTATCAAGTTTAAATCAACA
GTTTTTCTTTCCACAAATAAATCATTATGTAGGAACCATGATAAGCTTTT
CCTTACGTGAGACCTAGTTTAGCGTCCATGCAACACTTATTCTAGAAGAT
GAGTTTTGTTACTTATTTATTGAATTTCTTTACAATGTTGATAATGCTCT
TATTGTCGTTTTGGTTTTTAGTAAACGGCTAAGTATATCACACACTCAGA
CATTGAAAATGACAGAAGAAGTTCTTGCATTGAAATATAGGTAGgtactt
cattttttttctgatcCTGCTTATGTTAACTCAAGTTTAAAACAGTAATC
ACGACCGAGTGGTCTCCAATCTATCAATCAGGAAAGATTCTTTGTAGTTA
TGATTTTAGAAATATCACAattgataaaaagtaaaaaaaatcttttattt
tatttaagcCCCGATGGTCGATTCTTAGCCGTGTCTTTACTGGACAGCAC
agttaaagttttctttgctGATACTCTAAAggtaaaaagaagaaatatcT
TCTTGAGTTTTATTTATACTTAAAATTcctattttctttgattctcTAAC
TACATTCACAACAACTCGATCTTATTGTTTACTTCTTGGTCTAAACGACT
TCTAAACAACTTCCAGTTTGATACAACTATAATTAACAGATCAAGTTCAT
atattttgttttacttttcagTTCTTCTTATCATTATATGGACATAAGTT
TCCTGTGCTTTGTATGGATATCTCGCTGGTAAGTTGTTACCATTACCCAT
AAGCTTTACACTTGCCTTGACGTAATGTGGTATCTTTTCACACAACCTTA
TTCAAAGTTATCTGacactcgatgtagaaatttcttccaatacgctaaag
ctctgaatgTCGGGAAAACTTTCAACATTTGGAAAGCGGAATTTCGCCAG
ACTGCGTAGAGGATTTTACGGGTTGAGGCCTAAACCCAAGCCCCCGTTTT
TGAGGAATTTCTGGTCCAAGCACAGTATTTTCAGGGCCGTTGAGCCCGAC
TGGAGGGAATGTGGTTCATCACAGGCCGACTGGTATTCCGGGAAATTAGC
CCACTCCATTAGAGCCTTAGCGTGGGTaaccgccaatccgccatcggaat
atcagatattATTCAAAGCAGTTCAAAGGCTGGTTTGCAGGAATATGATA
AAAATACCGTTTATTCTCAAATCATATAGGACAGCACACTTTTAATCACT
GGATCGGCtgataaaaacatcaaaatttgggGATTAGATTTCGGTGATTG
CCACAAATCCATATTTGCCCATGATGACAGGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004885XLOC_004885Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008691-exon-sc0000087-1491911889:29599..30222TCONS_00008691-exon-sc0000087-1491911889:29599..30222Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1510915933:29599..30222TCONS_00008691-exon-sc0000087-1510915933:29599..30222Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1575043694:29599..30222TCONS_00008691-exon-sc0000087-1575043694:29599..30222Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1491911889:31557..31619TCONS_00008691-exon-sc0000087-1491911889:31557..31619Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1510915933:31557..31619TCONS_00008691-exon-sc0000087-1510915933:31557..31619Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1575043694:31557..31619TCONS_00008691-exon-sc0000087-1575043694:31557..31619Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1491911889:31967..32036TCONS_00008691-exon-sc0000087-1491911889:31967..32036Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1510915933:31967..32036TCONS_00008691-exon-sc0000087-1510915933:31967..32036Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1575043694:31967..32036TCONS_00008691-exon-sc0000087-1575043694:31967..32036Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1491911889:32175..32224TCONS_00008691-exon-sc0000087-1491911889:32175..32224Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1510915933:32175..32224TCONS_00008691-exon-sc0000087-1510915933:32175..32224Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1575043694:32175..32224TCONS_00008691-exon-sc0000087-1575043694:32175..32224Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1491911889:32413..32481TCONS_00008691-exon-sc0000087-1491911889:32413..32481Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1510915933:32413..32481TCONS_00008691-exon-sc0000087-1510915933:32413..32481Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1575043694:32413..32481TCONS_00008691-exon-sc0000087-1575043694:32413..32481Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1491911889:32616..32694TCONS_00008691-exon-sc0000087-1491911889:32616..32694Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1510915933:32616..32694TCONS_00008691-exon-sc0000087-1510915933:32616..32694Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1575043694:32616..32694TCONS_00008691-exon-sc0000087-1575043694:32616..32694Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1491911889:32963..33064TCONS_00008691-exon-sc0000087-1491911889:32963..33064Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1510915933:32963..33064TCONS_00008691-exon-sc0000087-1510915933:32963..33064Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1575043694:32963..33064TCONS_00008691-exon-sc0000087-1575043694:32963..33064Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1491911889:33285..33330TCONS_00008691-exon-sc0000087-1491911889:33285..33330Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1510915933:33285..33330TCONS_00008691-exon-sc0000087-1510915933:33285..33330Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1575043694:33285..33330TCONS_00008691-exon-sc0000087-1575043694:33285..33330Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1491911889:34238..34299TCONS_00008691-exon-sc0000087-1491911889:34238..34299Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1510915933:34238..34299TCONS_00008691-exon-sc0000087-1510915933:34238..34299Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1575043694:34238..34299TCONS_00008691-exon-sc0000087-1575043694:34238..34299Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1491911889:34556..34653TCONS_00008691-exon-sc0000087-1491911889:34556..34653Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1510915933:34556..34653TCONS_00008691-exon-sc0000087-1510915933:34556..34653Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1575043694:34556..34653TCONS_00008691-exon-sc0000087-1575043694:34556..34653Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1491911889:34908..34938TCONS_00008691-exon-sc0000087-1491911889:34908..34938Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1510915933:34908..34938TCONS_00008691-exon-sc0000087-1510915933:34908..34938Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1575043694:34908..34938TCONS_00008691-exon-sc0000087-1575043694:34908..34938Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1491911889:35073..35149TCONS_00008691-exon-sc0000087-1491911889:35073..35149Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1510915933:35073..35149TCONS_00008691-exon-sc0000087-1510915933:35073..35149Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1575043694:35073..35149TCONS_00008691-exon-sc0000087-1575043694:35073..35149Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1491911889:35318..35479TCONS_00008691-exon-sc0000087-1491911889:35318..35479Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1510915933:35318..35479TCONS_00008691-exon-sc0000087-1510915933:35318..35479Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1575043694:35318..35479TCONS_00008691-exon-sc0000087-1575043694:35318..35479Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1491911889:36409..36480TCONS_00008691-exon-sc0000087-1491911889:36409..36480Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1510915933:36409..36480TCONS_00008691-exon-sc0000087-1510915933:36409..36480Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1575043694:36409..36480TCONS_00008691-exon-sc0000087-1575043694:36409..36480Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1491911889:36842..36935TCONS_00008691-exon-sc0000087-1491911889:36842..36935Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1510915933:36842..36935TCONS_00008691-exon-sc0000087-1510915933:36842..36935Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1575043694:36842..36935TCONS_00008691-exon-sc0000087-1575043694:36842..36935Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1491911889:37676..37777TCONS_00008691-exon-sc0000087-1491911889:37676..37777Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1510915933:37676..37777TCONS_00008691-exon-sc0000087-1510915933:37676..37777Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1575043694:37676..37777TCONS_00008691-exon-sc0000087-1575043694:37676..37777Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1491911889:37945..38030TCONS_00008691-exon-sc0000087-1491911889:37945..38030Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1510915933:37945..38030TCONS_00008691-exon-sc0000087-1510915933:37945..38030Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1575043694:37945..38030TCONS_00008691-exon-sc0000087-1575043694:37945..38030Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1491911889:38670..38738TCONS_00008691-exon-sc0000087-1491911889:38670..38738Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1510915933:38670..38738TCONS_00008691-exon-sc0000087-1510915933:38670..38738Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1575043694:38670..38738TCONS_00008691-exon-sc0000087-1575043694:38670..38738Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1491911889:38907..38979TCONS_00008691-exon-sc0000087-1491911889:38907..38979Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1510915933:38907..38979TCONS_00008691-exon-sc0000087-1510915933:38907..38979Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1575043694:38907..38979TCONS_00008691-exon-sc0000087-1575043694:38907..38979Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1491911889:39170..39226TCONS_00008691-exon-sc0000087-1491911889:39170..39226Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1510915933:39170..39226TCONS_00008691-exon-sc0000087-1510915933:39170..39226Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1575043694:39170..39226TCONS_00008691-exon-sc0000087-1575043694:39170..39226Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1491911889:39678..39781TCONS_00008691-exon-sc0000087-1491911889:39678..39781Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1510915933:39678..39781TCONS_00008691-exon-sc0000087-1510915933:39678..39781Clytia hemisphaericaexon
TCONS_00008691-exon-sc0000087-1575043694:39678..39781TCONS_00008691-exon-sc0000087-1575043694:39678..39781Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000087supercontigsc0000087:29599..39781 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0922283	0.123826	0.0690426	0	0	0.0320863	0	0.180405	0.259524	0.0319339	0.543111	0.200709	0.15821	0.421032	0.169536	0.054597	0.204645	0.117263	0.172944	0.192413	0.181501	0.418943	0.0740165	0	0.0961413	0.234594	0.0420298	0.0412649	0.0722096	0.0710208
Blast
[Close]
BLAST of TCONS_00008691 vs. Swiss-Prot (Human)
Match: WDR3 (WD repeat-containing protein 3 OS=Homo sapiens GN=WDR3 PE=1 SV=1)

HSP 1 Score: 525.398 bits (1352), Expect = 3.680e-173
Identity = 279/576 (48.44%), Postives = 396/576 (68.75%), Query Frame = 2 
Query:  563 GNEDEVTSIAHSKKTSLIAVGYSNGTIKLWDLKNNTSDVLFSGHRSAISCLCFEKSGTKLISGSTDTDIIVWDIVGETGLYRLKGHKGMITDCVFMTTHNVMISSSKDMLVKFWDLDNQHCFLTIVGHKTEVWKLCLLNNETRLITGSGDAELRSYEIK----------------------------------EASDKXXXXXXXXXXXXXILRGGKGRVISLYLEEKGQYLACHGVDSTLDLFEIVDEDDXXXXXXXXXXXXXXXXXXMPEAEQIDEDKILVEREVTDEIKKVQSFRMSQKLRSAAISYNNTKEEIKVLSMFINNSFGYYKIDLSALPTKCQLQ-SLISNMGHRSDVRTVGFNSDATLIMTASGESVKIWNRSTQKCIRTMDSDYCLCSMFVPGERHVIVGTKTGKLQLFDISSGILLEAVDAHEEAVWSIALSPDKNGFVSGSADHEVKFWEFDLIIDEEYSSMGKRLSISHTQTLKMTEEVLALKYSPDGRFLAVSLLDSTVKVFFADTLKFFLSLYGHKFPVLCMDISLDSTLLITGSADKNIKIWGLDFGDCHKSIFAHDD 2185
            G + EVT +  S     +AVGY +G+I+++ L +   +V F+GH++AI+ L +++ G +L SGS DTDIIVWD++ E+GLYRLKGHK  IT  +F+   N++++S KD +VK+WDLD QHCF T+VGH+TEVW L LL+ E RLITG+ D+ELR ++I                                   E  +     +LSC   GSI+R G+ RV++L +++ G+ LACHG DS L+LF I+ + +IQK + K+ KK  KK K      + ++ ++ VE  + DEI++V + + S K++S  +  ++   E+K + +  NN    Y ++ S LPT   ++ S I+  GHRSDVRT+ F+SD   +++A+ +S+KIWNRST +CIRTM  +Y LCS FVPG+R V++GTKTGKLQL+D++SG LLE +DAH+ A+WS++LSPD+ GFV+G AD  VKFW+F+L+ DE  +S  KRLS+  T+TL++ E+VL + YSP+ + LAVSLLD TVK+F+ DTLKFFLSLYGHK PV+CMDIS D  L+ TGSAD+N+KIWGLDFGDCHKS+FAHDD
Sbjct:   63 GLKQEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAITTLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLLVTSGKDTMVKWWDLDTQHCFKTMVGHRTEVWGLVLLSEEKRLITGASDSELRVWDIAYLQEIEDPEEPDPKKIKGSSPGIQDTLEAEDGAFETDEAPEDRILSCRKAGSIMREGRDRVVNLAVDKTGRILACHGTDSVLELFCILSKKEIQKKMDKKMKKARKKAKLHSSKGEEEDPEVNVEMSLQDEIQRVTNIKTSAKIKSFDL-IHSPHGELKAVFLLQNNLVELYSLNPS-LPTPQPVRTSRITIGGHRSDVRTLSFSSDNIAVLSAAADSIKIWNRSTLQCIRTMTCEYALCSFFVPGDRQVVIGTKTGKLQLYDLASGNLLETIDAHDGALWSMSLSPDQRGFVTGGADKSVKFWDFELVKDE--NSTQKRLSVKQTRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISHDGALIATGSADRNVKIWGLDFGDCHKSLFAHDD 634
The following BLAST results are available for this feature:
BLAST of TCONS_00008691 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WDR33.680e-17348.44WD repeat-containing protein 3 OS=Homo sapiens GN=... [more]
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