|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008638 ID=TCONS_00008638|Name=TCONS_00008638|organism=Clytia hemisphaerica|type=transcript|length=1614bp
tggaaATAGAAATTAACAAGTTAACCAGCAAATCTCTAAAAGGTGATATT
CATTCCAGAGGAGAAAcgagggaattttttttttaagtctaTGAATCTCA
ATAATAACCTTTTGAAAGCTGATGTTGGGGCCAAATATTGGAATAAACTG
ACGAAGCCATTGACTTAATTAAGTGAAATTTTAGGATCCATTTGGGTTCA
TTTTCGCTTCATCAGCCAAGTTTAAAGGGCCGTGACCTCAGCCCTCCCTA
AGATGAAAATTATTGGTTGAAATGTGATTTTACATTAGTGTTCCTTATTT
TCATCACAAAAAGTGTACCGTGAACCCTTTGAAAACATCTGGTACTAAAT
AGGTTTGAGTTTGACTAATGATGCCTCTACGTAAAAATAATTTGGTCCAC
TTTTATTGTTGGCTATAGATAACAATAGCTTTGTAAAGCTCTTAACAACA
CAATGCTAGATataaaaagctataaaaattaaaatgcatATTTTAATTTA
ATGAAAACTACGAGActttaaggttttatttttaaataagtgttcccgtt
tcagaTCAGACATATGTTTCATattaggacagtgtctgcctatttgttat
attgtgcggatataagcaaaaaaatgtttttctttccctctttctaatca
atcttgctccacgtCCGTGTCAATTCAgtataaaaaacttgtaaattaaa
attgatgagtaagcaaacgatatcactcttatttaaaaacaaaaccttta
aagaaacaaaagaaaataaaaaaacattatctagGTATTTAGATATctta
agaaataaagaaaactaCATTTTATCCAAAACAACCAATCTTTATCGGCC
TTCTTCTATCGTGAAAAGGCCATAAATAAgtctaaaatgttctttaccag
ttcgcgaaattaaacttcgtattttccaaaaataaacttGATCTTCAATG
ATGGTGTATTGCACCCACATCCAAAATGAAACACATCTATTACACAAAGC
TTAGCAATATGACAACCACTCAACATGCATTCACTGAGAGGTCATCCATT
CTCCCACTTAAAATATTGATTAGGGAGAGACCCGGAGGGGgagggggcac
tgaccttgccGGCCGACAGGGACGTGCCGCTTGAGTTTGAAAAAATAGAC
CATGTCAGATATGAATATCTcataaatttgggaccctgtcaaaaaaaatg
aaacattttcccattttcaccctgaaaagtggccaAAATGACTAACAAta
gacaaaaaattgaaaagtttctaatttccaccctgaaattTGTCAACAAt
taccaaaagtcgaccctgcCAGAtaaacatcttgaaaattagtaaattta
agACCAGCTTAATCAAGCTTAGGACCACGAGCCAATAAAAAACCAAGGTC
ATAACAATAGCTTGCAAATAAGAAGAAAGCCTATTTCAAAAACTCTAGTC
ATGTTTTTCAATCGGTCACCCGTTGATAAAAGAATGACCTCCATTATATT
CAGGGAACACCATTTTCCTCCAATCACCAAGATTGAGGATTTCTTCTCCA
ACGAAAAACTCATCCAACACTTTCGGTCCATTTATTAAACCATAATCAAC
AAATCACCAAAACT Run BLAST on NCBI transcript from alignment at sc0000086:797451..799553- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008638 ID=TCONS_00008638|Name=TCONS_00008638|organism=Clytia hemisphaerica|type=transcript|length=2103bp|location=Sequence derived from alignment at sc0000086:797451..799553- (Clytia hemisphaerica)
TGGAAATAGAAATTAACAAGTTAACCAGCAAATCTCTAAAAGGTGATATT
CATTCCAGAGGAGAAACGAGGGAATTTTTTTTTTAAGTCTATGAATCTCA
ATAATAACCTTTTGAAAGCTGATGTTGGGGCCAAATATTGGAATAAACTG
ACGAAGCCATTGACTTAATTAAGTGAAATTTTAGGATCCATTTGGGTTCA
TTTTCGCTTCATCAGCCAAGTTTAAAGGGCCGTGACCTCAGCCCTCCCTA
AGATGAAAATTATTGGTTGAAATGTGATTTTACATTAGTGTTCCTTATTT
TCATCACAAAAAGTGTACCGTGAACCCTTTGAAAACATCTGGTACTAAAT
AGGTTTGAGTTTGACTAATGATGCCTCTACGTAAAAATAATTTGGTCCAC
TTTTATTGTTGGCTATAGATAACAATAGCTTTGTAAAGCTCTTAACAACA
CAATGCTAGATATAAAAAGCTATAAAAATTAAAATGCATATTTTAATTTA
ATGAAAACTACGAGACTTTAAGGTTTTATTTTTAAATAAGTGTTCCCGTT
TCAGATCAGACATATGTTTCATATTAGGACAGTGTCTGCCTATTTGTTAT
ATTGTGCGGATATAAGCAAAAAAATGTTTTTCTTTCCCTCTTTCTAATCA
ATCTTGCTCCACGTCCGTGTCAATTCAGTATAAAAAACTTGTAAATTAAA
ATTGATGAGTAAGCAAACGATATCACTCTTATTTAAAAACAAAACCTTTA
AAGAAACAAAAGAAAATAAAAAAACATTATCTAGGTACATGTTTTTTCTT
TTATAAGCATTGCACTTATAAGCATATCTAGGCTCAGATATGGGGAAAAT
TAAGCATATGGCCTGCATTACTTGAGCCTACGAAAAATATTTTTTTCCTG
ATTGGGCTCTTCCAGAAAAAATCCAATCATGGGGGGTGGAGGATATATTA
TTTTTTTCATGAATTACCCCTGGACATTTTCATTTTTAACCCCCTGGACA
CGGGTTATACCCCTGGACAAACATCAAATCAACCCCGTGGACACAAAAAA
TTACCCCTGGACATTGCAATTTACCCCCTGGACATTGCNATTGTGCGGAT
ATAAGCAAAAAAATGTTTTTCTTTCCCTCTTTCTAATCAATCTTGCTCCA
CGTCCGTGTCAATTCAGTATAAAAAACTTGTAAATTAAAATTGATGAGTA
AGCAAACGATATCACTCTTATTTAAAAACAAAACCTTTAAAGAAAGAAAA
GAAAATAAAAAAACATTATCTAGGTATTTAGATATCTTAAGAAATAAAGA
AAACTACATTTTATCCAAAACAACCAATCTTTATCGGCCTTCTTCTATCG
TGAAAAGGCCATAAATAAGTCTAAAATGTTCTTTACCAGTTCGCGAAATT
AAACTTCGTATTTTCCAAAAATAAACTTGATCTTCAATGATGGTGTATTG
CACCCACATCCAAAATGAAACACATCTATTACACAAAGCTTAGCAATATG
ACAACCACTCAACATGCATTCACTGAGAGGTCATCCATTCTCCCACTTAA
AATATTGATTAGGGAGAGACCCGGAGGGGGAGGGGGCACTGACCTTGCCG
GCCGACAGGGACGTGCCGCTTGAGTTTGAAAAAATAGACCATGTCAGATA
TGAATATCTCATAAATTTGGGACCCTGTCAAAAAAAATGAAACATTTTCC
CATTTTCACCCTGAAAAGTGGCCAAAATGACTAACAATAGACAAAAAATT
GAAAAGTTTCTAATTTCCACCCTGAAATTTGTCAACAATTACCAAAAGTC
GACCCTGCCAGATAAACATCTTGAAAATTAGTAAATTTAAGACCAGCTTA
ATCAAGCTTAGGACCACGAGCCAATAAAAAACCAAGGTCATAACAATAGC
TTGCAAATAAGAAGAAAGCCTATTTCAAAAACTCTAGTCATGTTTTTCAA
TCGGTCACCCGTTGATAAAAGAATGACCTCCATTATATTCAGGGAACACC
ATTTTCCTCCAATCACCAAGATTGAGGATTTCTTCTCCAACGAAAAACTC
ATCCAACACTTTCGGTCCATTTATTAAACCATAATCAACAAATCACCAAA
ACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00008638-exon-sc0000086-1575043694:798770..799553 | TCONS_00008638-exon-sc0000086-1575043694:798770..799553 | Clytia hemisphaerica | exon |
| TCONS_00008638-exon-sc0000086-1575043694:797451..798280 | TCONS_00008638-exon-sc0000086-1575043694:797451..798280 | Clytia hemisphaerica | exon |
| TCONS_00008638-exon-sc0000086-1510915933:798770..799553 | TCONS_00008638-exon-sc0000086-1510915933:798770..799553 | Clytia hemisphaerica | exon |
| TCONS_00008638-exon-sc0000086-1510915933:797451..798280 | TCONS_00008638-exon-sc0000086-1510915933:797451..798280 | Clytia hemisphaerica | exon |
| TCONS_00008638-exon-sc0000086-1491911889:798770..799553 | TCONS_00008638-exon-sc0000086-1491911889:798770..799553 | Clytia hemisphaerica | exon |
| TCONS_00008638-exon-sc0000086-1491911889:797451..798280 | TCONS_00008638-exon-sc0000086-1491911889:797451..798280 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000086 | supercontig | sc0000086:797451..799553 - |
Blast
The following BLAST results are available for this feature:
|
