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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008632 ID=TCONS_00008632|Name=TCONS_00008632|organism=Clytia hemisphaerica|type=transcript|length=1925bp
GGTTTTCGCATTATGGAAACACTGTAGAGAGAGTTTTTCTCCCATTTATT
CAAACTCattgaaagaaaacattttgtCTCATTCAAAGTGAACCATATAG
GAAAAGGCGCTGTTTCAAGAAAATAGAGTTTCAACCAGGAGAACCCCTTC
AAAGCGACTTCATCAGTTTACATTGGAAACGTTACAGGAGACTTTTTACA
ACTTGTGATTGATCGCTCTGTTACCACTGAtcattattgattgattttct
tcttcactgGAAGAATTCACTGTGGAAGATCTTCGGTTTGGGTTCTTTAA
ACCCTCctttttgacccttttttataCCCTCTGGACGAAAGAGAAATTTA
TTTGATCGGATATTTTTTGTTATGGTTTCGACACTTGAGAGACCTCTTTG
TCAAAGCTACGGTGCCGACGAGGAAAAGGATGAGATGGTACGTTTCTTTG
GGATTTTCCATCCTAAACAAGTTTTCCAAAAGGCGAGAAGTTACGAAGCA
GATACCATGTCAATGCGTCGCCAATGGACCAAACGATCGCAGCGATCGCA
AAAATCGTCTAGTTTTCAGTCCGCAGAGTCTGGTAGCGGAGTATCCACTT
TTCATATCGTTCTACGGGCGATGTTATGTCTGATTTTACATTTCATGTTG
CTGATGATAGCGCTCATTTCGGCTGCCGTAATTTTCTCACACGTAGAAGA
TGAAACTGAATGGCATACACCTGGAAGTAACCAATCAAACGTCAGGAATT
TTGCGGAGCGTTGGAATAGACTTGAATTGAAGTACAATGTGACTTTCACT
CAGGAAGATAAAAGTTTATTTGCCATCAATACTGGGCTCAACACAGGGAC
GATTGAGAAAAGCTCAAATAGCCAGAGTTATAATTACAAGAAATGGTTTT
ACTTTGCATCGATGGTCTCAACTACGATAGGTTATGGAGATGTGTTCCCA
AAGACTGAATCTGGTCGTCTTGTTTTCATCATATTCTCCATCATATCTAT
TCCGCTGATGCTCTCCTTTATCGCATCTTGTGGAGATAAGATTCGTGTTA
TGCATACAAGCTTCTTGTCTGCTCTTCGTCAGTGTGTTACAGGACAGCAA
GGAGGGGCACCAGAGGATCTGCTTTCATGTCTTCTCATTACCATATCGTT
CGTTGGACACACCAGTGTGGGATGCGCTCTCATCTCAGGTCAACACAACT
GGTCATTGGTGGATAAGATCTATTACCATGTTTCCATGTTCACCACAACT
GGCCTTGGTGATATCATTGAGCCATTGGACCAACAGATTGACAATGTAGT
ACCGTTATTCTTCTATCATATCTTCGGCTTAGCCCTCCTGTTTGCGGCAA
tcaaatcattttattgttggtaTCAATCTCACCAAGAGGCTCTAGCGGTA
TTACGGTTGACCCAACGTCCGCTTAAAGCACGCGGCCGCGTCACCGAGTT
TTTACCATGCTGTCGTCCGAAACTGAGAGAGGAGCCAAGAGTGGAATCGA
CCATGTTAATCTAATTTTGATTGTCATAATATGAATacgaattaaaaaat
acttaaaattcgCTTGAAGAAACGTGCAGAAACATTTTTTACGAGTAAGA
AACAGTGTAATCTAGTGCCGTGTTCAAAGGGTGAGATAGTGTAAAACATA
CTTGGGTCACTTTAATAGGTGTAACAAACACCCTATATAGCTTGTTTCTG
ATATACTAAATTTATCCTAGAGTGGCAAGTATTGGAGTTGATTTCATTGA
TATGTTGGCTAAAAGATTCAAAATGTTATTATTCCTGTAAAGACCAAACA
GTTGGTCGGGTGTTTTAAAGTCTGTTTTCAATTATGACTTTTTAACGCAA
TCTTTTTCGTTAATATAATATTATATGATagtttcgaaatattttttaga
aaatttgtaaattctTTAAGTTTTG Run BLAST on NCBI protein sequence of TCONS_00008632-protein >TCONS_00008632-protein ID=TCONS_00008632-protein|Name=TCONS_00008632-protein|organism=Clytia hemisphaerica|type=polypeptide|length=380bp
MVSTLERPLCQSYGADEEKDEMVRFFGIFHPKQVFQKARSYEADTMSMRR
QWTKRSQRSQKSSSFQSAESGSGVSTFHIVLRAMLCLILHFMLLMIALIS
AAVIFSHVEDETEWHTPGSNQSNVRNFAERWNRLELKYNVTFTQEDKSLF
AINTGLNTGTIEKSSNSQSYNYKKWFYFASMVSTTIGYGDVFPKTESGRL
VFIIFSIISIPLMLSFIASCGDKIRVMHTSFLSALRQCVTGQQGGAPEDL
LSCLLITISFVGHTSVGCALISGQHNWSLVDKIYYHVSMFTTTGLGDIIE
PLDQQIDNVVPLFFYHIFGLALLFAAIKSFYCWYQSHQEALAVLRLTQRP
LKARGRVTEFLPCCRPKLREEPRVESTMLI Run BLAST on NCBI transcript from alignment at sc0000086:609083..612880- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00008632 ID=TCONS_00008632|Name=TCONS_00008632|organism=Clytia hemisphaerica|type=transcript|length=3798bp|location=Sequence derived from alignment at sc0000086:609083..612880- (Clytia hemisphaerica)
GGTTTTCGCATTATGGAAACACTGTAGAGAGAGTTTTTCTCCCATTTATT
CAAACTCATTGAAAGAAAACATTTTGTCTCATTCAAAGTGAACCATATAG
GAAAAGGCGCTGTTTCAAGAAAATAGAGTTTCAACCAGGAGAACCCCTTC
AAAGCGACTTCATCAGTTTACATTGGAAACGTTACAGGAGACTTTTTACA
ACTTGTGATTGATCGCTCTGTTACCACTGATCATTATTGATTGATTTTCT
TCTTCACTGGAAGAATTCACTGTGGAAGATCTTCGGTTTGGGTTCTTTAA
ACCCTCCTTTTTGACCCTTTTTTATACCCTCTGGACGAAAGAGAAATTTA
TTTGATCGGATATTTTTTGTTATGGTTTCGACACTTGAGAGACCTCTTTG
TCAAAGCTACGGTGCCGACGAGGAAAAGGATGAGATGGTACGTTTCTTTG
GGATTTTCCATCCTAAACAAGTTTTCCAAAAGGCGAGAAGTTACGAAGCA
GATACCATGTCAATGCGTCGCCAATGGACCAAACGATCGCAGCGATCGCA
AAAATCGTCTAGTTTTCAGTCCGCAGAGTCTGGTAGCGGAGTATCCACTT
TTCATATCGTTCTACGGGCGATGTTATGTCTGATTTTACATTTCATGTTG
CTGATGATAGCGCTCATTTCGGCTGCCGTAATTTTCTCACACGTAGAAGA
TGAAACTGAATGGCATACACCTGGAAGTAACCAATCAAACGTCAGGAATT
TTGCGGAGCGTTGGAATAGACTTGAATTGAAGTACAATGTGACTTTCACT
CAGGAAGATAAAAGTTTATTTGCCATCAATACTGGGCTCAACACAGGGAC
GATTGAGAAAAGCTCAAATAGCCAGAGTTATAATTACAAGAAATGGTTTT
ACTTTGCATCGATGGTCTCAACTACGATAGGTATGTTTAAAAATTTAACT
TCTTTCACATTCATTTCGAAAAGTTTCTTTTACTCGTGCACTATAATACT
TTATACCTCTTTCAATATTTTTTTCAAGAATTAGGTCTTCGTCGATAAGA
AGTAATATAATATCGATCTTTACCGATTTAGCTGAAATTTACAGTTAATT
CATTCCAGGCTATTTTCCAATATTACCTTATCGGGGAAAACTTCTTCGGG
GAAAATTTTCGTCGGGGAAAAATATTCGTCACTTGCTGGTTTTGGTAAAC
GCATTAAGGCCGGGGAAAATTTTCGTCGGGGAAAAATATTCGTCACTTGG
CCGAAATTTCGTCACTTTTCCCCGACGAAGTTTTCCCCGATAAGATATTT
AAACTCGCTATGACGATTGATAACTGACTCCCAACCGTTGCCGAGAACCT
GGCTCATTGGATATAGTTAACAGTACTTTCAATGTTTTTCGTTTTTTTCG
TGAACAGGTTATGGAGATGTGTTCCCAAAGACTGAATCTGGTCGTCTTGT
TTTCATCATATTCTCCATCATATCTATTCCGCTGATGCTCTCCTTTATCG
CATCTTGTGGAGATAAGATTCGTGTTATGCATACAAGCTTCTTGTCTGCT
CTTCGTCAGTGTGTTACAGGACAGCAAGGAGGGGTAAGCATTTCTGTTTC
TTGCGATTTCTTCTGTTTCTATATCGCAGTGTTGCAAATAAGGAATTGTG
GCTTGGTCGGTGATTTTTCAAATTTTGGAGTAACAAAATAGTTCTAGATC
TAGGTTTAAAACACTAGCAAATGTTTCTAGTCATTGGATACTAATGATTA
TGAGAAGATAAAACAATCAACAAATAAAACATCAGGGACAAATAGTACTT
CGTTGCATTTTTTACAAGTTTTCACCGGACAAAAGTAATAAAGTTTACCC
TTCAAAATAGCCGGTGGAAACCAAAAAGTGCCTGGCGATAACCGATCATT
GGCCGTTATTTGCAGTTCTGAATTATGCTGAGAGGAGGAGGAAAGGATGC
TTTAATCTTGTACAGTCTTCTCGTGACTCACACTTAATTCTATACGTCAG
AGGGTGTATGGAAGAGATGATGTTTCTGATCATGATTAAAGGATTGTTTT
GAGGTGTTATAATCCTTCTTTTTATTCCGTTATAAACTGCTCATTTACCG
CAACTTTCTAATATGAAGGGCAGATGTCGCCAAATCTATCTTGATTCTCA
CTTTCTTTCAAAGACCTATTTTATAGTTCACAATTGTTTTGCCTGTTTTT
TTTCACAGCCAATAACACTAACAAAAGACGTTTAAATGGATAGAACAAAA
AGTAAAATCCATCAAAAATTTTTTTGAATTCCCTCTAACAATCGCGCCAA
CTATGAGAAAAAGAAATTCAACAACCCGTTTCAGAATATGATAATTTGAT
TAACAAATTCTGTTTTCAAAGCTGAAAAATAAAAAAAACTTGAATTCTTT
TCATTGTTAATAAAACTTTTCTACTCATCGCCTCATACAGCGAAAGAAAA
ATGACCTCCTATCCGAAAACCCTCCGTTTGTAAGGTTGTCCTTTTACCGT
TGATGGGGATGTACCTAAATCAAGCCTAAATCAAGTGCTATCTTCTTGAA
CTATTATTATGATCGAATATATCATAACCAGGATATTTCCGAGGTCATCA
AAAGGGATCACTTGCACACATTCGAAAATAATTAAGTACAACGGAGTCTC
CTTAACTCGAACCTCTACAACTCGAATGTCTCCTTAATCCTTAACAATAC
CTTATAAATCTTACTCCGTATCTCGAAATTCTCTTCACTGGAACAAAATT
TCATTCCCGGTGCGTGTTCAAATTATAACTGTAGTTCCTCCATCCCTTTG
ATCTTCGGGACTCGAATCCAAAATTCAATTTATCTATCCTGGTAATATCT
CAAAAACCAAAAACCAAAAAAACTAAAAGCCTTTCATTCGGAAAATGAAA
TACGGTAAACGAATCACATTTCTAGATCATGATCATGAAGCTACAGTAAT
TAATTTCAAAATTATATTTCATCTTTCAGGCACCAGAGGATCTGCTTTCA
TGTCTTCTCATTACCATATCGTTCGTTGGACACACCAGTGTGGGATGCGC
TCTCATCTCAGGTCAACACAACTGGTCATTGGTGGATAAGATCTATTACC
ATGTTTCCATGTTCACCACAACTGGCCTTGGTGATATCATTGAGCCATTG
GACCAACAGATTGACAATGTAGTACCGTTATTCTTCTATCATATCTTCGG
CTTAGCCCTCCTGTTTGCGGCAATCAAATCATTTTATTGTTGGTATCAAT
CTCACCAAGAGGCTCTAGCGGTATTACGGTTGACCCAACGTCCGCTTAAA
GCACGCGGCCGCGTCACCGAGTTTTTACCATGCTGTCGTCCGAAACTGAG
AGAGGAGCCAAGAGTGGAATCGACCATGTTAATCTAATTTTGATTGTCAT
AATATGAATACGAATTAAAAAATACTTAAAATTCGCTTGAAGAAACGTGC
AGAAACATTTTTTACGAGTAAGAAACAGTGTAATCTAGTGCCGTGTTCAA
AGGGTGAGATAGTGTAAAACATACTTGGGTCACTTTAATAGGTGTAACAA
ACACCCTATATAGCTTGTTTCTGATATACTAAATTTATCCTAGAGTGGCA
AGTATTGGAGTTGATTTCATTGATATGTTGGCTAAAAGATTCAAAATGTT
ATTATTCCTGTAAAGACCAAACAGTTGGTCGGGTGTTTTAAAGTCTGTTT
TCAATTATGACTTTTTAACGCAATCTTTTTCGTTAATATAATATTATATG
ATAGTTTCGAAATATTTTTTAGAAAATTTGTAAATTCTTTAAGTTTTG Coding sequence (CDS) from alignment at sc0000086:609083..612880- >TCONS_00008632 ID=TCONS_00008632|Name=TCONS_00008632|organism=Clytia hemisphaerica|type=CDS|length=3429bp|location=Sequence derived from alignment at sc0000086:609083..612880- (Clytia hemisphaerica)
GCACCAGAGGATCTGCTTTCATGTCTTCTCATTACCATATCGTTCGTTGG
ACACACCAGTGTGGGATGCGCTCTCATCTCAGGTCAACACAACTGGTCAT
TGGTGGATAAGATCTATTACCATGTTTCCATGTTCACCACAACTGGCCTT
GGTGATATCATTGAGCCATTGGACCAACAGATTGACAATGTAGTACCGTT
ATTCTTCTATCATATCTTCGGCTTAGCCCTCCTGTTTGCGGCAATCAAAT
CATTTTATTGTTGGTATCAATCTCACCAAGAGGCTCTAGCGGTATTACGG
TTGACCCAACGTCCGCTTAAAGCACGCGGCCGCGTCACCGAGTTTTTACC
ATGCTGTCGTCCGAAACTGAGAGAGGAGCCAAGAGTGGAATCGACCATGT
TAATCTAAGTTATGGAGATGTGTTCCCAAAGACTGAATCTGGTCGTCTTG
TTTTCATCATATTCTCCATCATATCTATTCCGCTGATGCTCTCCTTTATC
GCATCTTGTGGAGATAAGATTCGTGTTATGCATACAAGCTTCTTGTCTGC
TCTTCGTCAGTGTGTTACAGGACAGCAAGGAGGGATGGTTTCGACACTTG
AGAGACCTCTTTGTCAAAGCTACGGTGCCGACGAGGAAAAGGATGAGATG
GTACGTTTCTTTGGGATTTTCCATCCTAAACAAGTTTTCCAAAAGGCGAG
AAGTTACGAAGCAGATACCATGTCAATGCGTCGCCAATGGACCAAACGAT
CGCAGCGATCGCAAAAATCGTCTAGTTTTCAGTCCGCAGAGTCTGGTAGC
GGAGTATCCACTTTTCATATCGTTCTACGGGCGATGTTATGTCTGATTTT
ACATTTCATGTTGCTGATGATAGCGCTCATTTCGGCTGCCGTAATTTTCT
CACACGTAGAAGATGAAACTGAATGGCATACACCTGGAAGTAACCAATCA
AACGTCAGGAATTTTGCGGAGCGTTGGAATAGACTTGAATTGAAGTACAA
TGTGACTTTCACTCAGGAAGATAAAAGTTTATTTGCCATCAATACTGGGC
TCAACACAGGGACGATTGAGAAAAGCTCAAATAGCCAGAGTTATAATTAC
AAGAAATGGTTTTACTTTGCATCGATGGTCTCAACTACGATAGGCACCAG
AGGATCTGCTTTCATGTCTTCTCATTACCATATCGTTCGTTGGACACACC
AGTGTGGGATGCGCTCTCATCTCAGGTCAACACAACTGGTCATTGGTGGA
TAAGATCTATTACCATGTTTCCATGTTCACCACAACTGGCCTTGGTGATA
TCATTGAGCCATTGGACCAACAGATTGACAATGTAGTACCGTTATTCTTC
TATCATATCTTCGGCTTAGCCCTCCTGTTTGCGGCAATCAAATCATTTTA
TTGTTGGTATCAATCTCACCAAGAGGCTCTAGCGGTATTACGGTTGACCC
AACGTCCGCTTAAAGCACGCGGCCGCGTCACCGAGTTTTTACCATGCTGT
CGTCCGAAACTGAGAGAGGAGCCAAGAGTGGAATCGACCATGTTAATCTA
AGTTATGGAGATGTGTTCCCAAAGACTGAATCTGGTCGTCTTGTTTTCAT
CATATTCTCCATCATATCTATTCCGCTGATGCTCTCCTTTATCGCATCTT
GTGGAGATAAGATTCGTGTTATGCATACAAGCTTCTTGTCTGCTCTTCGT
CAGTGTGTTACAGGACAGCAAGGAGGGATGGTTTCGACACTTGAGAGACC
TCTTTGTCAAAGCTACGGTGCCGACGAGGAAAAGGATGAGATGGTACGTT
TCTTTGGGATTTTCCATCCTAAACAAGTTTTCCAAAAGGCGAGAAGTTAC
GAAGCAGATACCATGTCAATGCGTCGCCAATGGACCAAACGATCGCAGCG
ATCGCAAAAATCGTCTAGTTTTCAGTCCGCAGAGTCTGGTAGCGGAGTAT
CCACTTTTCATATCGTTCTACGGGCGATGTTATGTCTGATTTTACATTTC
ATGTTGCTGATGATAGCGCTCATTTCGGCTGCCGTAATTTTCTCACACGT
AGAAGATGAAACTGAATGGCATACACCTGGAAGTAACCAATCAAACGTCA
GGAATTTTGCGGAGCGTTGGAATAGACTTGAATTGAAGTACAATGTGACT
TTCACTCAGGAAGATAAAAGTTTATTTGCCATCAATACTGGGCTCAACAC
AGGGACGATTGAGAAAAGCTCAAATAGCCAGAGTTATAATTACAAGAAAT
GGTTTTACTTTGCATCGATGGTCTCAACTACGATAGGCACCAGAGGATCT
GCTTTCATGTCTTCTCATTACCATATCGTTCGTTGGACACACCAGTGTGG
GATGCGCTCTCATCTCAGGTCAACACAACTGGTCATTGGTGGATAAGATC
TATTACCATGTTTCCATGTTCACCACAACTGGCCTTGGTGATATCATTGA
GCCATTGGACCAACAGATTGACAATGTAGTACCGTTATTCTTCTATCATA
TCTTCGGCTTAGCCCTCCTGTTTGCGGCAATCAAATCATTTTATTGTTGG
TATCAATCTCACCAAGAGGCTCTAGCGGTATTACGGTTGACCCAACGTCC
GCTTAAAGCACGCGGCCGCGTCACCGAGTTTTTACCATGCTGTCGTCCGA
AACTGAGAGAGGAGCCAAGAGTGGAATCGACCATGTTAATCTAAGTTATG
GAGATGTGTTCCCAAAGACTGAATCTGGTCGTCTTGTTTTCATCATATTC
TCCATCATATCTATTCCGCTGATGCTCTCCTTTATCGCATCTTGTGGAGA
TAAGATTCGTGTTATGCATACAAGCTTCTTGTCTGCTCTTCGTCAGTGTG
TTACAGGACAGCAAGGAGGGATGGTTTCGACACTTGAGAGACCTCTTTGT
CAAAGCTACGGTGCCGACGAGGAAAAGGATGAGATGGTACGTTTCTTTGG
GATTTTCCATCCTAAACAAGTTTTCCAAAAGGCGAGAAGTTACGAAGCAG
ATACCATGTCAATGCGTCGCCAATGGACCAAACGATCGCAGCGATCGCAA
AAATCGTCTAGTTTTCAGTCCGCAGAGTCTGGTAGCGGAGTATCCACTTT
TCATATCGTTCTACGGGCGATGTTATGTCTGATTTTACATTTCATGTTGC
TGATGATAGCGCTCATTTCGGCTGCCGTAATTTTCTCACACGTAGAAGAT
GAAACTGAATGGCATACACCTGGAAGTAACCAATCAAACGTCAGGAATTT
TGCGGAGCGTTGGAATAGACTTGAATTGAAGTACAATGTGACTTTCACTC
AGGAAGATAAAAGTTTATTTGCCATCAATACTGGGCTCAACACAGGGACG
ATTGAGAAAAGCTCAAATAGCCAGAGTTATAATTACAAGAAATGGTTTTA
CTTTGCATCGATGGTCTCAACTACGATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00008632-exon-sc0000086-1575043694:611951..612880 | TCONS_00008632-exon-sc0000086-1575043694:611951..612880 | Clytia hemisphaerica | exon |
| TCONS_00008632-exon-sc0000086-1575043694:611298..611473 | TCONS_00008632-exon-sc0000086-1575043694:611298..611473 | Clytia hemisphaerica | exon |
| TCONS_00008632-exon-sc0000086-1575043694:609083..609901 | TCONS_00008632-exon-sc0000086-1575043694:609083..609901 | Clytia hemisphaerica | exon |
| TCONS_00008632-exon-sc0000086-1510915933:611951..612880 | TCONS_00008632-exon-sc0000086-1510915933:611951..612880 | Clytia hemisphaerica | exon |
| TCONS_00008632-exon-sc0000086-1510915933:611298..611473 | TCONS_00008632-exon-sc0000086-1510915933:611298..611473 | Clytia hemisphaerica | exon |
| TCONS_00008632-exon-sc0000086-1510915933:609083..609901 | TCONS_00008632-exon-sc0000086-1510915933:609083..609901 | Clytia hemisphaerica | exon |
| TCONS_00008632-exon-sc0000086-1491911889:611951..612880 | TCONS_00008632-exon-sc0000086-1491911889:611951..612880 | Clytia hemisphaerica | exon |
| TCONS_00008632-exon-sc0000086-1491911889:611298..611473 | TCONS_00008632-exon-sc0000086-1491911889:611298..611473 | Clytia hemisphaerica | exon |
| TCONS_00008632-exon-sc0000086-1491911889:609083..609901 | TCONS_00008632-exon-sc0000086-1491911889:609083..609901 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000086 | supercontig | sc0000086:609083..612880 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005267 | potassium channel activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0071805 | potassium ion transmembrane transport |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0071805 |
potassium ion transmembrane transport |
| cellular_component |
GO:0016020 |
membrane |
| molecular_function |
GO:0005267 |
potassium channel activity |
Blast
The following BLAST results are available for this feature:
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