TCONS_00008575 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008575
Unique NameTCONS_00008575
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2693

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008575 ID=TCONS_00008575|Name=TCONS_00008575|organism=Clytia hemisphaerica|type=transcript|length=2693bp
AAATTACCGTTGACAAGACAACTGTCTGGTGAAGACGCCGATAAAGAAAT
TGATGACGAAAAACAAGATTCCGTTAAGCCAGTTTCAGAAACTGAAGAAG
TACAAGATGAACAAAAAGAGGCTGGTGACGATGTTGTTGAAAACCAACAG
AATTTAGATGAAGATGATACGAGGAACAAACAAGATATGATTCAAGAGCG
AGCACGTCAACTCATCTTGGAAGCACGCAAGAAAGCAGAACAGAATAAGG
ACGCTGAACCAAGTGCCAGTGACGACCCTGATGTTCGTGCCAAGAAATTC
TCCGAGATGAGGAGACAACGTGAAAAAGTTCTCCAACATAAATTGAATCA
GCAAGAAGATCGAAAACAGCTCTTACGTTCACAAGCCAATCAGTTACTTT
TGGATGCCAAGATGCGTGGATCGCTGCATAACATTGATCGTAGCGCAAAC
AGTCCTTCGAATGAATTCCCACCCTCCGCCTTTGGTGGCGAGGATATGGA
AGAGGGCGGTATGTCACCTGAAACTCAACAGCGCATGCGCAATAATGATT
TCCGTAAGAACCCGTTTACACTGGTGAAAAAGAGCAATAAACAATTGAAA
CAGATCACACCGAAGAATTATTTGAAAGAAGAACCTGATCCAGTTGATTC
TGAACCAAAATTACCCACGAAGACTTCACCAAGCAAGGCTGCCATAACGT
ATGCAGAATCACGTAAAGTGGAATTCGACTCGTTCGAAAGTGGTTTCCAA
TACAAACCTAAAAGAGATGTCGCGGCGGAAATAGCGGCCGAGCTTGCACG
CTTAAAAGAAGAGGAAGATGAAGCACAGCGTCAATTCGATCGCACTCAAG
CGGAGAAGAGAGGAGGAGCACAACAATACGAAGGTGGAGTGCAGGATGAA
GAGGGAGAGAGACATGTGGAGGAGTGCATTCcatctgaagaagaagaaga
ggtgGAAGAAGGACACGtgCCCGTCGATGACTATTTCTAcgaattggaaa
attttAACTTGAAATCTGCAGACGAGTATTATCACAACGAATTAGCACAA
CTTGAACAAGAAACCAAAGCATTAGATTTGGTGGCTCAGAAATTAGAATT
AGAACTACGTAAAGCCATGGACGCTGGCGACCAAGAAGGAGAAGAAGATT
TGCTTCAAGAGTGGTTCAATTTGGTCAACAAGAAGAATGAAATTATTCGA
AGGCAAAACGAAATTGCTCTTCTAGCAAAAGGTGATGACTTGGAGAGGAG
ATGTGAAATTGTAAACAGAGAACTCCGTGTCCTGAGTCAAATGAACGaat
gggAGAAAACAGAGGAGATCCGGTTGCGGGAAGACAATCTATTATCACAA
CTTGTGACACTGGTCAATCAGCGGAATCGACTTGTTCAAATCGAAGACAC
GCAACTTCAACAAAGTGTTCACGACGAAGAGCATGTGCAAACAGTGCTCC
AACAACAAACATCTTTCAATCAGAAGAACACCACTGTTGGTAATGTTGTT
GGATGGGTCAAAGGATTCAAATCTAAGTTTTGGTGATTTGTTGATTATGG
TTTAATAAATGGACCGAAAGTGTTGGATGAGTTTTTCGTTGGAGAAGAAA
TCCTCAATCTTGGTGATTGGAGGAAAATGGTGTTCCCTGAATATAATGGA
GGTCATTCTTTTATCAACGGGTGACCGATTGAAAAACATGACTAGAGTTT
TTGAAATAGGCTTTCTTCTTATTTGCAAGCTATTGTTATGACCTTGGTTT
TTTATTGGCTCGTGGTCCTAAGCTTGATTAAGCTGGTcttaaatttacta
attttcaagatgtttaTCTGgcagggtcgacttttggtaaTTGTTGACAa
atttcagggtggaaattagaaacttttcaattttttgtctaTTGTTAGTC
ATTTtggccacttttcagggtgaaaatgggaaaatgtttcattttttttg
acagggtcccaaatttatgAGATATTCATATCTGACATGGTCTATTTTTT
CAAACTCAAGCGGCACGTCCCTGTCGGCCggcaaggtcagtgccccctcC
CCCTCCGGGTCTCTCCCTAATCAATATTTTAAGTGGGAGAATGGATGACC
TCTCAGTGAATGCATGTTGAGTGGTTGTCATATTGCTAAGCTTTGTGTAA
TAGATGTGTTTCATTTTGGATGTGGGTGCAATACACCATCATTGAAGATC
aagtttatttttggaaaatacgaagtttaatttcgcgaactggtaaagaa
cattttagacTTATTTATGGCCTTTTCACGATAGAAGAAGGCCGATAAAG
ATTGGTTGTTTTGGATAAAATGtagttttctttatttcttaagATATCTA
AATACCtagataatgtttttttattttcttttctttctttaaaggttttg
tttttaaataagagtgatatcgtttgcttactcatcaattttaatttaca
agttttttatacTGAATTGACACGGacgtggagcaagattgattagaaag
agggaaagaaaaacatttttttgcttatatccgCACAATNgcaatgtcca
gggggtaaattgcaatgtccaggggtaattttttgtgtccacggggttga
tttgatgtttgtccaggggtataacccgtgtccagggggttaaaaatgaa
aatgtccaggggtaattcatgaaaaaaataatatatcctccac
Run BLAST on NCBI

transcript from alignment at sc0000086:788188..798618+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008575 ID=TCONS_00008575|Name=TCONS_00008575|organism=Clytia hemisphaerica|type=transcript|length=10431bp|location=Sequence derived from alignment at sc0000086:788188..798618+ (Clytia hemisphaerica)
AAATTACCGTTGACAAGACAACTGTCTGGTGAAGACGCCGATAAAGAAAT
TGATGACGAAAAACAAGATTCCGTTAAGCCAGGTAACAAACTAACTACTG
TAGTCGAACTGTAAATGAGCGTGTGTACGTGTTAATCGAATATATACGAA
ACTCTACAAAGTAATGGTCTACAAAgtagattaaattaaattttagattt
tgatgaaaaggtTTATTTAACTGAAGATTGTGTccttttctcaaaaactg
tacAAATCTTCGACTAACTTTTTGTGGAGGTTTTATTGGCTATATTATTG
GGTGGATGTTACGCTTGgggtttaaaatgtttttaacttcaCCCTTTTTC
TTACACCCCCATCTGCCAAAAAAAGCAAGCTTTGGTTCAGCTTTGTACAG
TACATACATATTAAAACCCGGTAAAACGTTTTATTGTTCAAGTTTCAGAA
ACTGAAGAAGTACAAGATGAACAAAAAGAGGCTGGTGACGAGGTTGTTGA
AAACCAACAGAATTTAGATGAAGATGATACGAGGGTATGTTTAAATTATT
CCTTGTCTTTATCATTattgagtttatgtatttgcacttttgaggaNAAG
AAGACGAGACACCTTCTACTACGCAATCTTCAACAACAAACAATGCTAAA
CAACAACAGCAGCAACCACGTATCCGAAGAAAATTACCGTTGACAAGACA
ACTGTCTGGTGAAGACGCCGATAAAGAAATTGATGACGAAAAACAAGATT
CCGTTAAGCCAGGTAACAAACTAACTACTGTAGTCGAACTGTAAATGAGC
GTGTGTACGTGTTAATTGAATATATACGAAACTCTACAAAgtagattaaa
ttaaattttagattttgatgaaaaggtTTATTTGACTGAAGATTGCCTCC
TATTCTCAAAAACTCTACAAATCTTCGACTAACTTTTTGTGGAGGTTTTA
TTGGCTATATTATTGGGAGGATGTTACGCTAGgggtttaaaatgttttta
acttcaCCCTTTTTCTTACACCCCCATCTGCCAAAAAAAGCAAGCTTTGG
TTCAGCTTTGTACAGTACATACATATTAAAACCCGGTAAAACGTTTTATT
GTTCAAGTTTCAGAAACTGAAGAAGTACAAGATGAACAAAAAGAGGCTGG
TGACGATGTTGTTGAAAACCAACAGAATTTAGATGAAGATGATACGAGGG
TATGTTTAAATTATTCCTTGTCTTTATCATTattgagtttatgtatttgc
acttttgaggatggTAGAGTGACTGAGTCGATTTGgtataacccgcagtt
ctgaccctcAAAAATACGGTAAAACGGTAAAAGTgatgatttaccgtcgt
cctcagtcagtcaggatgtagacaaattagatgcttaccgtctccgtcgc
acaaaaaacacacacataaactcggtattatcATTGCTCGACAGTGTTTT
TTCCCACGCAatatagacagctccaggcttttattttttgcgctcgaaac
gaaggaaggtATGATGCAGCCTACAAAATTGACAGATTCGAaactaaaat
cgaaatatttacGAACAATCTGCTGCTCTtcgatgtttttaatttttatt
tacgTTTTGTTTCCATAGAACAAACAAGATATGATTCAAGAGCGAGCACG
TCAACTCATCTTGGAAGCACGCAAGAAAGCAGAACAGAATAAGGTTTGTT
GTTAGGAGAAAGAAATTGCTGATAGCAGGACTATCATTGGCCTGGGAGAA
TCTACGAGAAACTGTAAAATGTGTTGTCTACAGAGGGCAAACCTAAGATC
TTGCTGGGTCATCTCTCGGTTAGTCTATCAATACACGAGGTCTACTACAC
AACCAGCCGCCAGGGTTATTTGTGACTAAGTTTGTATAAACCATCTTCTT
ATATTAAGTCTATAAGCGTTAGAAGAAAATCAATTACATTTCCCATTTCA
AATATAAGGATAAAAAAGGGGCTTCAAACTAACTTCATTGtcttatttct
tttattgagaAGGACGCTGAACCAAGTGCCAGTGACGACCCTGATGTTCG
TGCCAAGAAATTCTCCGAGATGAGGAGACAACGTGAAAAAGTTCTCCAAC
ATAAATTGAATCAGGTATGATACAAATGTTAGCATTGAAGTAaggacaaa
tattttttttaattgtcagGATGACTCCCAGGACTATTTTGCATTCCATG
ATATGTCCTATGTGAGTCACTTCAGTTTTAGAACTTTAAGGGgaacattg
ggcttttccagaaaaagatttaacccccactgttgaggatattgattttt
ttgaagtaTCGACCTCCTTgaatatcctactttattagtaaagacatCCC
TGGACATCcacttttaaaaatatgctcaaccccctgggtatcctctctta
taaagatgcttacccctggatatcgtatttttttacttgagaAGACACTT
TACCctctggatatccgctcccctatagatatttaaccccctggatatcc
acttttgaacaaaaatcgttaacccccaaGATAttcgatatcctcaacag
ggggtcacggactatttctggaaaatccCATTAGCGGGCGGTTCTAGGTA
GTTTTTGTGTATTCTCAAGTGAACGAGTTTATTCTTTTTGTGTATGGTAA
AACATCCTAATGGGATAAGCGCGTGGGGCTTAAACCGTAGAACACagcac
aaaaaatattttttactccTCGCCCTTCAATCATTCGTCCCTTCCATCAT
TCGTCAATTAGTAGCTTTCCAATgcaatcaaactttcaaaatgaagaaaa
aactttAGTGTTTTTTTCCCTGTTTTCTATCCGTTGATGCGATTGCACAG
GGTGGAATGGTATTTTCCTTTTCGTCCTttatttttcccctttttccaAG
CCCAGTCTAAAAAACATCGAAAACAAATTTAAGCTTTTGACAATGTGTTC
GAcgcttttgttttctttcctcAAATTCCCAGCAAGAAGATCGAAAACAG
CTCTTACGTTCACAAGCCAATCAGTTACTTTTGGATGCCAAGATGCGTGG
ATCGCTGCATAACATTGATCGTAGCGCAAACAGTCCTTCGAATGAATTCC
CACCCTCCGCCTTTGGTGGCGAGGATATGGAAGAGGGCGGTATGTCACCT
GAAACTCAACAGCGCATGCGCAATAATGATTTCCGTAAGAACCCGTTTAC
ACTGGTGAAAAAGAGCAATAAACAATTGAAACAGATCACACCGAAGAATT
ATTTGAAAGAAGAACCTGATCCAGTTGATTCTGAACCAAAATGTAAGTGA
TTTATTAATAAGATTTAAAATCAGTAAAAGGTCCATATTGACGTAGCCTA
CACAAGACGCCAGATCCAGGTTTTCGGGTTccaaacattcaattttttga
cgtcactttcgAAGTCCTTGCTGTATGGACGTCGAAAAAACCTTGTATGC
CATCTGGTCTTAGATCAGCGGGTGATGTAATGAACTGGTTTGAATCTTCA
AATGGACCAAGGCCGTTATTGGTCTTCTAGGCTGATGACAAgcgtttatt
tttttttaatttcaacattCATTTGAAATTCTTCTTTTATGTGTGGCTTT
GATGGTTTTTAAATCAGTCAACTTAATTTTCCCGCTCGAGGTGTCTGTCT
GTCGGACcgcaagaattttttttatctataaagATTAAGCAATTAAAATT
GGGAAATATTTCGTTTCTTGGAGGTCTTGTAATTTTTCTTGACGTAAAAG
CTTAATCTCTAGGAACTCTCTGCACGTTTTAATAAAAAGCAACCTTGTCT
TTGCCATCCAAAACAGTTGAACTCGCGCTGCTGCTTACATATGTGGAACA
TGGTAACTATAGTTTCAAGACATGAGTTTAGGAAAAGATGTTGCAATTTT
ATTCTTTCATGTTTTAGTACCCACGAAGACTTCACCAAGCAAGGCTGCCA
TAACGTATGCAGAATCACGTAAAGTGGAATTCGACTCGTTCGAAAGTGGT
TTCCAATACAAACCTAAAAGAGATGTCGGTAAGTGTTCGACGCAGCTACT
TATTTGAATCAGTGTTAAAGGTTCTTCCCTTTAAGATAGATTTCCGACTC
AGTGAAGTATATAGAGAGGCTTCCCCGTCTCCAACttctgcataattcac
cagAATTTCATGAATATCTGCTAATCTagtataaaatcaattttccatcT
TAGATAGTGGTTTAGGCGATCATGAAGATCTATTGAAAAACTACTGCATA
TCTCTTTttaatgatgacatcatcatgCCTTTTACAAGACATCGGACAAA
ATAATTTATCGCGGAATGAGAATGATGGTTCTTGGAATTCTTGTTAGAAT
CCAACTTCGTCAAAGTCCAGAATAAAGAACATTTCCAAGGGCTCTTATCC
AGGATGAACTAAATGATCATCAGCAGATATGTATAAAACAGTTTCCAATC
TGTTATTTATTTAGCGGCGGAAATAGCGGCCGAGCTTGCACGCTTAAAAG
AAGAGGAAGATGAAGCACAGCGTCAATTCGATCGCACTCAAGCGGAGAAG
AGAGGAGGAGCACAACAATACGAAGGTGGAGTGCAGGATGAAGAGGGAGA
GAGACATGTGGAGGAGTGCATTCcatctgaagaagaagaagaggtgGAAG
AAGGACACGtggtaagaacaatttcatcAGAACATTATGCtgacattttt
gtcaaaaacctaagaacatattaagaacaatttcatcAGAATGTAAAGTT
TATTTGTCGAAATGTAAGAAGAATTTCATCACAATATGAGGTTAATTTTT
CGAAACccaaaaacaaattcaaagaaCAATCTTTAGTCTCAAATTCCATA
AAGTAAAAAATCTAAAGCTTATTTTAAGAACTTTAACATCTTTAATCAAT
ACACTCTCCTCATGATAcatgaaattttgatgatttataAACTTTTATTT
GACCAGTCTATGTCTTTCTGCTTACAGCCCGTCGATGACTATTTCTAcga
attggaaaattttgtgagtattttaaATTAGATGGTATTTATCATAATGT
ATTTAAAAGCAAAGTGTTTGTTTCAATAAATGACCCTCTGCATTGACATC
CCCCGTAAACGAAACCCTATTTCTATTTAAAATTTGATGTAATAGTCCCA
ATAGTTAAAGACCCTTTTTCTGAGATTGAAATTCACAATTTGTGCTAGTG
TTCTTCCGTCCCTGCGAAGTACCGAAAGCGTCGTTTCCGTCTctcgaaat
tcaacaaaattcaatgaaatattatcaatagatcttttcataaattacat
cacgaatatcacttgcctcgtttcgAAATGATTGCCTAGGTGATTAACTC
CCGGcggtttttattaaaattactttttatttataaaaaaataactcaat
gtctcaagggacataatcaccgtggtaattgtttgaatacgagtgatgtt
cgtgacgtaatttatgaaaaggtctaactacaatcagcgccgaaatatat
tggcaattttgggtattttaacgtttttcagaatttaaaagtcgggcgag
aattgtagtttcagtacttccactttgcttcattggatttttctatttgg
gaggggttaagtggcttccaggctatattctgagctttattggaaaattt
ttgaacttttagatcctgagattctaaggtcctagtcctaatgttaaaac
tctacttccaaCTGTTCTTCAGAACACTTAAAAATCATTTACGGtttcaa
agttttgagggaattccccttttgtgccaaatatttctgCGCTGATTGTA
GTCTTATTTAAGGTGAAAAGACAGAGATTGCTTTCATTCTTATCCTAAGG
TCTCTAATATTATCCTTCTAGAACTTGAAATCTGCAGACGAGTATTATCA
CAACGAATTAGCACAACTTGAACAAGAAACCAAAGCATTAGATTTGGTGG
CTCAGAAATTAGAATTAGAACTACGTAAAGCCATGGACGCTGGTGAGTTT
GACCAGGGCTTTGATTTTAAACTTCTGTTGAGTCCATCACAGTCTTTTCT
TTTGCCTGCACCTTGTTTGGTATTCTCAACTTCATTTCAGCTATGTATGG
CTATCTGTTTTTCCGCTTTTGTACCCCTATAATATAACCTTCCTGATAAT
TTCTTTCCCGGACTTAAATAAATCAGTGGGGTCTGGCTGaaattgttcat
tctttttctttggGTAAAAATGTTCGGGACTTTCTTTACATTTAGAAATT
CATATTTCCGGTGCCTTGAGACGAGAAGAAATATTACTCGATTCAATACC
TCGGTTTATTCAATCCAATGTAGTTTTCAGGTTTCGACACTCCCGTCGTC
TGGGTCGATTATAATGTATTTTTATAATTGTTGCTAGGCGACCAAGAAGG
AGAAGAAGATTTGCTTCAAGAGTGGTTCAATTTGGTCAACAAGAAGAATG
AAATTATTCGAAGGCAAAACGAAATTGCTCTTCTGTAAGGAATTCTCTAA
AGACTTTTTTCGAATACCTTTGTCCATAAGTTTATATATTAGATATTTTG
taatgaaaaatctacaaaatttgccttgtttgggGGCAAACATGCTTTGT
TTAGGGGTAACGATGAATGTCCTGAGGATCGACTGCTGCTTGTCCAGGGG
TTAAAGGTCAAATGTTAATaacctccacccccccccccttattcaatttt
tttccggACCGAAGAGCCCGATACTTCTAAAGTGCTGAAAAAGGCCAGCG
GCCGAAATATTCATTAGAAAGATTATGTGTTTTTTGCTAACTCGTTAATC
CTTCTGATTTAGCTTGATAACGATAGAAATTGATTAGgtttaaatatatt
ttcagtCGATATTCATTTCGTTTTGAGGCATTTTGCTTATAGTTTATTTA
TACCATACCTGATTTTTTNTATATTCAGTCGATATTCATTTCGTTTGTTA
GGCATTTTGCCTCTGGTTTATTTATACCATACCTGATTTCTTTGTAGAGC
AAAAGGTGATGACTTGGAGAGGAGATGTGAAATTGTAAACAGAGAACTCC
GTGTCCTGAGTCAAATGAACGGTACGCTATAATAAGAAATGTTTTTACTT
TAACTACTTCGGTCCTTGAATATAATACAGTAAGGCTCACTACTTTTTCG
ACAGAAATTCAATACACAggctgcaaaattaaagtctgaagacaaatcac
gcttttactcgaaatttttatgtgcttgttacatgacatttatttctgat
tggttcgaattcaTTGACACttataaagttatcagctgtaaagTGTAAAT
TCCCAAGCATGGGAATagaatcacgtgaactttttcgagtaattacatgt
tttgactgcattgattaTAATTTTGCGATCCTTGTATTGCAAATGTACTC
TAGGAAAACTCACATCCTAGCCTTCAGTTCTTTTAGAATGCTTCTAGATA
AATCTTCTAAAGCTGTGGATATTATAGACAGTATCAAAGTGCTCTACATT
GTTGATCTGAGGCTATcgtttgacaaaaaaattagcAGGGTTTTTGAATG
ATTGATTctgtaatttctttatttttaagaagaGTCCCTTTTTCGCTTAG
TTGggaaatttgaatcccgaaACAAAACAATCTGTACTGCAGTTTATTGG
GAGTTGTGAGAGTGACGTGATTTGGTCGTTCATCACGAGTGTAGATTTGA
GTACAATAGTTGGACATTATAGTCCTGTAGAACTTTGTCGAAAATAGAgt
caacctagaaaaaattCGAATAGAAGGTTTCtttacaccgttggaaagat
aattttatcagctttcgAATGTGGGGTAGAGTCAATTTACCTTATATTCA
CCTTACATTACCAATATGATAACAGGGGTTTTAAACGAATctatgatgat
tttttttttagaatgggAGAAAACAGAGGAGATCCGGTTGCGGGAAGACA
ATCTATTATCACAACTTGTGACACTGGTCAATCAGCGGAATCGACTTGTT
CAAATCGAAGACACGCAACTTCAACAAAGGTATTATCCTTTGTAAATTGT
ATCATTCACCCCGTGACCAAAAATGTTATTCGAATATGATAAAGATTTGA
ATTACATAGTAATTTAAATCGCTTTTCAGCTGAGGGCCCTCAATCTCtta
gtttgaattacagaaagtttCGAATGATTGAAGTTCGGATTATAGAGAAT
TGACTGAGAATCTACGACCTAAGAATCGAACCAGGAATCTCTTGCACCTT
TTGACTTCGCATATGGCTatcgtgacgtcataatttcttATTCTCATTTT
CCAGTGTTCACGACGAAGAGCATGTGCAAACAGTGCTCCAACAACAAACA
TCTTTCAATCAGAAGAACACCACTGTTGGTAATGTTGTTGGATGGGTCAA
AGGATTCAAATCTAAGGTTAGTATTTCCCGGTTGTACTTTTTATCCTCTG
ACATTTTGCTGTAAAGAGTGATCTCTATTTGTTCCTTCCCTGTATGTGTA
GAACAAAAATCATCAATCATTCTCGAAAGTCCTTTTAAGTGAGTAAGTCT
TTCAATCGCAGTCGGGGGCGTCCCGAAGGCTCTtcttctttcgatagcta
tctaccggAAGGTAGGGGATGGCGCCACTTTTCCTCCCTGAATCGCTCCA
CTAACCCTTCTTATTTATTGCTGAGCATtgagcagagaggcatcaagtac
cattttggaaatcctTGGTATGACCCGGCAGGGCCATAAAACGGCCGCTA
AAGTCCTTCTTTTACTTCACTCCTCTTATCTTCCGTAGTCGTAGACCTTT
TATAGCTAATCCACAGGAGACTTTCTAAAGTCACCTTAAAATAAGCCCTT
TTAAGGGATTGAAATTTCACAAACAGAGCCAGAAAGTAACCTGCGAAGAT
CGATGAAAACTATATTACAATCAAACGAATCTTATTTTGTGAACTTCTCA
ACGGGCAAGCTATAatagaaatgaaataaaattaataaaatggTGAGCGC
AGAACTGAGCGCTATCATCTCATATATATGTAATCCTGAAGAAATGTATA
TTAAGTCGAAATTGTTGAATAATTTGAAGTTTGGGACCAAGATGTTCATG
GTAAATAAAATTGGGAACcgaaaagaaaagtgaaaatggAAAATTAAGTA
GACCTCCTTTTTTGTACCTTTAAAAAAAGTATGTAATATGTTTTTGATTT
ATTCTGTTTgagtttcgatttttttcctcttcattttttctattgttttg
ttttttcacgTTTAGTTTTGGTGATTTGTTGATTATGGTTTAATAAATGG
ACCGAAAGTGTTGGATGAGTTTTTCGTTGGAGAAGAAATCCTCAATCTTG
GTGATTGGAGGAAAATGGTGTTCCCTGAATATAATGGAGGTCATTCTTTT
ATCAACGGGTGACCGATTGAAAAACATGACTAGAGTTTTTGAAATAGGCT
TTCTTCTTATTTGCAAGCTATTGTTATGACCTTGGTTTTTTATTGGCTCG
TGGTCCTAAGCTTGATTAAGCTGGTcttaaatttactaattttcaagatg
tttaTCTGgcagggtcgacttttggtaaTTGTTGACAaatttcagggtgg
aaattagaaacttttcaattttttgtctaTTGTTAGTCATTTtggccact
tttcagggtgaaaatgggaaaatgtttcattttttttgacagggtcccaa
atttatgAGATATTCATATCTGACATGGTCTATTTTTTCAAACTCAAGCG
GCACGTCCCTGTCGGCCggcaaggtcagtgccccctcCCCCTCCGGGTCT
CTCCCTAATCAATATTTTAAGTGGGAGAATGGATGACCTCTCAGTGAATG
CATGTTGAGTGGTTGTCATATTGCTAAGCTTTGTGTAATAGATGTGTTTC
ATTTTGGATGTGGGTGCAATACACCATCATTGAAGATCaagtttattttt
ggaaaatacgaagtttaatttcgcgaactggtaaagaacattttagacTT
ATTTATGGCCTTTTCACGATAGAAGAAGGCCGATAAAGATTGGTTGTTTT
GGATAAAATGtagttttctttatttcttaagATATCTAAATACCtagata
atgtttttttattttcttttctttctttaaaggttttgtttttaaataag
agtgatatcgtttgcttactcatcaattttaatttacaagttttttatac
TGAATTGACACGGacgtggagcaagattgattagaaagagggaaagaaaa
acatttttttgcttatatccgCACAATNgcaatgtccagggggtaaattg
caatgtccaggggtaattttttgtgtccacggggttgatttgatgtttgt
ccaggggtataacccgtgtccagggggttaaaaatgaaaatgtccagggg
taattcatgaaaaaaataatatatcctccac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004797XLOC_004797Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008575-exon-sc0000086-1491911889:788188..788269TCONS_00008575-exon-sc0000086-1491911889:788188..788269Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1510915933:788188..788269TCONS_00008575-exon-sc0000086-1510915933:788188..788269Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1575043694:788188..788269TCONS_00008575-exon-sc0000086-1575043694:788188..788269Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1491911889:788630..788667TCONS_00008575-exon-sc0000086-1491911889:788630..788667Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1510915933:788630..788667TCONS_00008575-exon-sc0000086-1510915933:788630..788667Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1575043694:788630..788667TCONS_00008575-exon-sc0000086-1575043694:788630..788667Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1491911889:789333..789386TCONS_00008575-exon-sc0000086-1491911889:789333..789386Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1510915933:789333..789386TCONS_00008575-exon-sc0000086-1510915933:789333..789386Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1575043694:789333..789386TCONS_00008575-exon-sc0000086-1575043694:789333..789386Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1491911889:789806..789880TCONS_00008575-exon-sc0000086-1491911889:789806..789880Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1510915933:789806..789880TCONS_00008575-exon-sc0000086-1510915933:789806..789880Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1575043694:789806..789880TCONS_00008575-exon-sc0000086-1575043694:789806..789880Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1491911889:790200..790301TCONS_00008575-exon-sc0000086-1491911889:790200..790301Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1510915933:790200..790301TCONS_00008575-exon-sc0000086-1510915933:790200..790301Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1575043694:790200..790301TCONS_00008575-exon-sc0000086-1575043694:790200..790301Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1491911889:791170..791479TCONS_00008575-exon-sc0000086-1491911889:791170..791479Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1510915933:791170..791479TCONS_00008575-exon-sc0000086-1510915933:791170..791479Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1575043694:791170..791479TCONS_00008575-exon-sc0000086-1575043694:791170..791479Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1491911889:792105..792215TCONS_00008575-exon-sc0000086-1491911889:792105..792215Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1510915933:792105..792215TCONS_00008575-exon-sc0000086-1510915933:792105..792215Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1575043694:792105..792215TCONS_00008575-exon-sc0000086-1575043694:792105..792215Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1491911889:792652..792848TCONS_00008575-exon-sc0000086-1491911889:792652..792848Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1510915933:792652..792848TCONS_00008575-exon-sc0000086-1510915933:792652..792848Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1575043694:792652..792848TCONS_00008575-exon-sc0000086-1575043694:792652..792848Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1491911889:793165..793200TCONS_00008575-exon-sc0000086-1491911889:793165..793200Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1510915933:793165..793200TCONS_00008575-exon-sc0000086-1510915933:793165..793200Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1575043694:793165..793200TCONS_00008575-exon-sc0000086-1575043694:793165..793200Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1491911889:794059..794179TCONS_00008575-exon-sc0000086-1491911889:794059..794179Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1510915933:794059..794179TCONS_00008575-exon-sc0000086-1510915933:794059..794179Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1575043694:794059..794179TCONS_00008575-exon-sc0000086-1575043694:794059..794179Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1491911889:794575..794671TCONS_00008575-exon-sc0000086-1491911889:794575..794671Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1510915933:794575..794671TCONS_00008575-exon-sc0000086-1510915933:794575..794671Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1575043694:794575..794671TCONS_00008575-exon-sc0000086-1575043694:794575..794671Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1491911889:795185..795258TCONS_00008575-exon-sc0000086-1491911889:795185..795258Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1510915933:795185..795258TCONS_00008575-exon-sc0000086-1510915933:795185..795258Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1575043694:795185..795258TCONS_00008575-exon-sc0000086-1575043694:795185..795258Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1491911889:796099..796216TCONS_00008575-exon-sc0000086-1491911889:796099..796216Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1510915933:796099..796216TCONS_00008575-exon-sc0000086-1510915933:796099..796216Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1575043694:796099..796216TCONS_00008575-exon-sc0000086-1575043694:796099..796216Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1491911889:796492..796603TCONS_00008575-exon-sc0000086-1491911889:796492..796603Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1510915933:796492..796603TCONS_00008575-exon-sc0000086-1510915933:796492..796603Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1575043694:796492..796603TCONS_00008575-exon-sc0000086-1575043694:796492..796603Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1491911889:797453..798618TCONS_00008575-exon-sc0000086-1491911889:797453..798618Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1510915933:797453..798618TCONS_00008575-exon-sc0000086-1510915933:797453..798618Clytia hemisphaericaexon
TCONS_00008575-exon-sc0000086-1575043694:797453..798618TCONS_00008575-exon-sc0000086-1575043694:797453..798618Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000086supercontigsc0000086:788188..798618 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	1.08675e-08	0	0	1.42598e-06	0	9.29049e-09	6.34563e-07	0	0.619392	0.00840587	0	2.12644e-10	4.01808e-10	4.23326e-09	8.22174e-07	0.00594945	7.83489	2.47997	0.000119688	0.000494872	0.00089689	0	1.20527e-07	0.000238711	8.32591e-09	0.376038	0	5.12128e-07	0
Blast
[Close]
BLAST of TCONS_00008575 vs. Swiss-Prot (Human)
Match: EHBP1 (EH domain-binding protein 1 OS=Homo sapiens GN=EHBP1 PE=1 SV=3)

HSP 1 Score: 127.872 bits (320), Expect = 6.822e-30
Identity = 73/156 (46.79%), Postives = 102/156 (65.38%), Query Frame = 1 
Query:  991 ELENFNLKSADEYYHNELAQLEQETKALDLVAQKLELELRKAMDAG-DQEGEEDLLQEWFNLVNKKNEIIRRQNEIALLAKGDDLERRCEIVNRELRVLSQMNEWEKTEEIRLREDNLLSQLVTLVNQRNRLVQIEDTQLQQSVHDEEHVQTVLQQ 1455
            E+ N   K   +Y   ELA LE E K +D  A  +E  LR  MD G + E EE ++QEWF LVNKKN +IRR N+++LL K  DLERR E++NRELR +  + +W+KTE  + RE  LL +LV LVN+R+ LV+  D Q +Q+  ++EH++  L+Q
Sbjct: 1061 EVLNKGFKDTSQYVVGELAALENEQKQIDTRAALVEKRLRYLMDTGRNTEEEEAMMQEWFMLVNKKNALIRRMNQLSLLEKEHDLERRYELLNRELRAMLAIEDWQKTEAQKRREQLLLDELVALVNKRDALVRDLDAQEKQAEEEDEHLERTLEQ 1216
The following BLAST results are available for this feature:
BLAST of TCONS_00008575 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EHBP16.822e-3046.79EH domain-binding protein 1 OS=Homo sapiens GN=EHB... [more]
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