TCONS_00008462 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008462
Unique NameTCONS_00008462
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length58

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008462 ID=TCONS_00008462|Name=TCONS_00008462|organism=Clytia hemisphaerica|type=transcript|length=58bp
GTAGTGTTCAAAGATGCTTACACACGATTATGGCCAACCAACAATGATAA
TCACGTTC
Run BLAST on NCBI

transcript from alignment at sc0000085:298167..298900-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008462 ID=TCONS_00008462|Name=TCONS_00008462|organism=Clytia hemisphaerica|type=transcript|length=734bp|location=Sequence derived from alignment at sc0000085:298167..298900- (Clytia hemisphaerica)
GTAGTGTTCAAAGATGCTTACACACGATTATGGCCAACCAACAATGATAA
GTATGTGACAACCTACAATCACAAACATAACATTTGGCACGAAAGGGAAA
AACATTTCCAATACGACTTTCAATATAGCCTGGAAGCCACTTAACCCCTC
CCAAATTGAAAAATCCAATGAAACAAAGTGGAAGTACTGAAATTGCAATT
CTTGCCCGAGTTTTAAATCCTGAGAAACGTTAAAATACCCAAAAATGTAA
AATGTATTTCATTGCTGATTGTAGTTAATCGTCTCTTCAGTTCAGACCCG
AACAAATAAGATCCGAGCACTCACTGAATTTCTTCATTACTTGTCGTTAT
CATTTGATCAAATTAAACTTTCAAAGCTTTCAAAAATACAAAGTAAAAAA
CTATAGCAAATCCAATCCCTTACACGCTTTTTTATCAAAACAGTGAATTT
TGTCTGAGGCTGAGATGTTCTTAATGTTTTGAAATCCAAGGCTTTCAATT
TTCTTACGATTTTCTAAAAATTGTGCTTAAAATATGTTTCTTAGTATTTT
CTGAAACCCGAGGCTCACATTGTTCTTAATTTGCTCTTGAGTTTTGGCCA
ATTTTCAGCCTCTTGTTCTCATAAAAAATTGTTCTTATAAAAAGAAAAGC
GTAACAATTCTAATCCCTTATATATTTGTCCAAGGGTGTCCGAGTTGTAA
AATTTGCACTCATTTTTTCGTTATAGTCACGTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004729XLOC_004729Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008462-exon-sc0000085-1575043694:298851..298900TCONS_00008462-exon-sc0000085-1575043694:298851..298900Clytia hemisphaericaexon
TCONS_00008462-exon-sc0000085-1575043694:298167..298174TCONS_00008462-exon-sc0000085-1575043694:298167..298174Clytia hemisphaericaexon
TCONS_00008462-exon-sc0000085-1510915933:298851..298900TCONS_00008462-exon-sc0000085-1510915933:298851..298900Clytia hemisphaericaexon
TCONS_00008462-exon-sc0000085-1510915933:298167..298174TCONS_00008462-exon-sc0000085-1510915933:298167..298174Clytia hemisphaericaexon
TCONS_00008462-exon-sc0000085-1491911889:298851..298900TCONS_00008462-exon-sc0000085-1491911889:298851..298900Clytia hemisphaericaexon
TCONS_00008462-exon-sc0000085-1491911889:298167..298174TCONS_00008462-exon-sc0000085-1491911889:298167..298174Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000085supercontigsc0000085:298167..298900 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008462 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top