TCONS_00008397 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008397
Unique NameTCONS_00008397
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2664

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008397 ID=TCONS_00008397|Name=TCONS_00008397|organism=Clytia hemisphaerica|type=transcript|length=2664bp
TtcagaaattaaataaaaaataaaaactgaaaaataaaactgaTACACCA
AACAAAGTCATAATGGCATCGAACACtccgaaaattcaaaaacttgatGA
AGTGGTGGTCAATCGAATCGCAGCTGGTGAAGTTATCCAAAGGCCTGCCA
ACGCCATTAAAGAAATGATCGAAAACAGCCTCGACGCAAAATCCAAATCT
ATTCAGGTAACAGTCAAAGATGGTGGGTTAAAGTTGCTGCAGATACAGGA
TGATGGGTGCGGGATACGCAAAGAAGACATGCATATTGTTTGTGAGCGAT
TCACCACAAGTAAACTTGCTTCGTTCGATGATTTGAAATCCATAGCAACG
TACGGGTTTCGTGGTGAAGCATTGGCTAGCATCAGTCACGTGGCCCATTT
GACCATCACAACGAAGACGGGGGACTCGCCATGCGCTTTCAAAGCCAAAT
ATGAAGATGGCAAGATGGTGCCACTTCAAGTGGGAGGGAAAGTGGAAGCC
AAAGCATGCGCTGGTAACAAAGGTACTCAGATCACAGTGGAAGACCTCTT
TTACAACGTTGCTGTGCGTCGAAAAGCATTACGTAATACCAACGAGGAGC
ACGCCAAAATTGTTGACGTCATCAGTAAATACGCTATACATAATCCGTCT
GTCGGGTTTTCACTCAAGAAAGTCGGTAACAGTGTCGGAGATGTTCGGAC
GTCACCAAAATCCACCGTCATCGACAACATCAAGACAATCTATGGGCCGA
CTTTGTCGAAAGAGTTACTGGAAGTTACTCACGAGGATACTCAGTACGCT
TTCAAAATGCACGCTTTTGTATCAAACGCCAATTACTCCATAAAGAAATG
TACTCTGTTGCTGTTCATCAACCACCGACTTGTGGAGTCAACGGCGCTTC
GTAAGGCTCTTGATGCCGTGTATGTGAACTATCTACCCAAAGACAAACAC
CCTTTCATGTACATGAGTTTAGAACTAAATCCCATCAACTTAGATGTCAA
CGTCCACCCTACAAAACACGAAGTGAAGTTCCTCCATGAAGAAGCTATCA
TTGAATCTATCCAGAAGTGCGTGGAAACCAAATTGCTCGGCTCCAATGAA
TCCCGACAATATTACACACAGTCGTTGATACCGAAAATGTTGTCGGCTGG
TGTTGATTGTCCTGTTGCAGATATTGTTCAAGGTAACCAAAGCGATAAAA
ACAACAATGCGAATGAAGGAGAGAGCGAAAAGAAGAAACTGTACGCCCAT
CAGATGGTGCGAACGGACGCACGCGAACAAAAGATTGAAGCTTTCTTCCC
CTACAAAGCGCAAGTCAAAAGTCCAACACAATGTTCAAAAGTGACGGAAG
AAACGGTCAACCAAACTTCACATGTTAATAAAGAAAATGTCGAAACTGAT
GGAGCTAGTAATGCAACAATTCTAACAGTTGATAGTGAACTTCATGGAAA
TGAACACTCGAACACATCAAACCAAAATGGTATCCCTGATGACCAATCAG
GTGGTCACTTGACTGAAGTCAATGAACTACCACGTGAAGAACGGAAAGAA
AATGGTAGCGAAGGAGCAACAACGATCAACTTGCTCCAAGATGAAGAAGG
AGACGTCCAAATGAAAGATGTTGAACAAAACACAAGAAGAGGAGACGAGC
ATTCAAATAATACGCATCAGAAAAGACATGCTGCTGATGGTCTatatact
ttcattttcaatttctaaacaaCTGTTTTGCTNATACGCATCAGAAAAGA
CCTGCTGCTGATGTAAAGCAACCCGTTGCGAAATCGTCAAGCAAGATATC
TTCAACAGCGTGTGATGAACGAACCATGAAATTGACCAGCATCCGAAACT
TGAGACGTCAAATTGAAGATAATGAACACTTAGGCGTGAAAAAGATTTTA
GAGGAGCACAAATTTGTTGGCTGTGTAAATAGGTCTTTAGCTTTGATGCA
ACACTTGACGCAACTCTATCTTGTCAACgttcaaaatttaagtcaagAGC
TTTTTTacgaaatcatcattttccGATTCGGAAATTTCGGATATTTAGAA
TTGTCAGAACCGGCCCCGATTTTTGAACTTGTCCGGTTAGTTTTGGATAC
TCCGGAAAGCGGTTGGGAACCGGAAGATGGCGAGAAAGACGAACTTGCGA
AATACACTGTGGACTTGTTGAAGAGTAAAGCTGATATGTTGATGGATTAT
TTCTCTGTTGAAATCAACGAACAAGGAGAATTGACAGCAATACCTCTTCT
GTTGAGTAACTATACACCGAATTGGAATAAATTGCCCTTGCTGATGTTGC
GGCTTGCTTCTGAGGTGGATTGGGACAACGAACAGCAATGTTTTCACGAT
TTCGCGATAGAGTTGAGTGATTTTTATTCCACAGGAGGATCAAAACAACA
AACAGAAGACGAGGATGAAGGAGAATGGAAGCATCAGATCGAACACCTCA
TTTTCCCTGCTCTAAGAAACACTTTCATCCCTCCTAAACGTTTCTCTAAT
GATGGTTGCTTCTTAGAAGTCGCAAACCTGCCTGACTTATACAAAGTCTT
CGAAAGATGTTAGAATTAAAGAGTTTCTTTATGATTTGGTTTTATGTTAA
CTTTGTGAAGTTATGAAGAAAATTTCCCTAAGAAGTTCTTTCGTGTTCAC
CGCTTCGATTTTTA
Run BLAST on NCBI

transcript from alignment at sc0000085:173451..178232+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008397 ID=TCONS_00008397|Name=TCONS_00008397|organism=Clytia hemisphaerica|type=transcript|length=4782bp|location=Sequence derived from alignment at sc0000085:173451..178232+ (Clytia hemisphaerica)
TtcagaaattaaataaaaaataaaaactgaaaaataaaactgaTACACCA
AACAAAGTCATAATGGCATCGAACACtccgaaaattcaaaaacttgatGA
AGTGGTGGTCAATCGAATCGCAGCTGGTGAAGTTATCCAAAGGCCTGCCA
ACGCCATTAAAGAAATGATCGAAAACAGCCTCGACGCAAAATCCAAATCT
ATTCAGGTATCAATCACAGTTCACAGACCCTCTTCTTATCTCATAATTGT
GTTTTCCATCCTAGATACTAACTTGCATGTTGGTTGGTATTCGAAATCTT
TGATCATGGAAGCATTTCATATTTTCTCATTCACAGGTAACAGTCAAAGA
TGGTGGGTTAAAGTTGCTGCAGATACAGGATGATGGGTGCGGGATACGCA
AAGAAGACATGCATATTGTTTGTGAGCGATTCACCACAAGTAAACTTGCT
TCGTTCGATGATTTGAAATCCATAGCAACGTACGGGTTTCGTGGTGAAGC
ATTGGCTAGCATCAGTCACGTGGCCCATTTGACCATCACAACGAAGACGG
GGGACTCGCCATGCGCTTTCAAAGCCAAATATGAAGATGGCAAGATGGTG
CCACTTCAAGTGGGAGGGAAAGTGGAAGCCAAAGCATGCGCTGGTAACAA
AGGTATGTCTCCATTCCCTTTTGTTGTGGTGAGATATATCTATAGTGAGA
TTAAAGTAAACTTTGATTTGTTACTCAGCTTGGAAAGTATTGTATTCGAT
TTCCTTGTTCTTTAAGGTACTCAGATCACAGTGGAAGACCTCTTTTACAA
CGTTGCTGTGCGTCGAAAAGCATTACGTAATACCAACGAGGAGCACGCCA
AAATTGTTGACGTCATCAGTAAATACGCTATACATAATCCGTCTGTCGGG
TTTTCACTCAAGAAAGTCGGTAACAGTGTCGGAGATGTTCGGACGTCACC
AAAATCCACCGTCATCGACAACATCAAGACAATCTATGGGCCGACTTTGT
CGAAAGAGTTACTGGAAGTTACTCACGAGGATACTCAGTACGCTTTCAAA
ATGCACGCTTTTGTATCAAACGCCAATTACTCCATAAAGAAATGTACTCT
GTTGCTGTTCATCAACCACCGACTTGTGGAGTCAACGGCGCTTCGTAAGG
CTCTTGATGCCGTGTATGTGAACTATCTACCCAAAGACAAACACCCTTTC
ATGTACATGAGTTTAGAACTAAATCCCATCAACTTAGATGTCAACGTCCA
CCCTACAAAACACGAAGTGAAGTTCCTCCATGAAGAAGCTATCATTGAAT
CTATCCAGAAGTGCGTGGAAACCAAATTGCTCGGCTCCAATGAATCCCGA
CAATATTACACACAGTCGTTGATACCGAAAATGTTGTCGGCTGGTGTTGA
TTGTCCTGTTGCAGGTTAAACTTTTTACTTATTTGGTTACTTGAGCGGAT
ACAGGCTGTTACAGAATTATGTTTGAATAATTCCCTTTCGTTTAGATATT
GTTCAAGGTAACCAAAGCGATAAAAACAACAATGCGAATGAAGGAGAGAG
CGAAAAGAAGAAACTGTACGCCCATCAGATGGTGCGAACGGACGCACGCG
AACAAAAGATTGANTGTTGTGGCGAGATATATCTATAGTGAGATTAAAGT
AAACTTTGATTTGTTACTCAGCTTGGAAAGTATTGTATTCGATTTCCTTG
TTCTTTAAGGTACTCAGATCACAGTGGAAGACCTCTTTTACAACGTTGCT
GTGCGTCGAAAAGCATTACGTAATACCAACGAGGAGCACGCCAAAATTGT
TGACGTCATCAGTAAATACGCTATACATAATCCGTCTGTCGGGTTTTCAC
TCAAGAAAGTCGGTAACAGTGTCGGAGATGTTCGGACGTCACCAAAATCC
ACCGTCATCGACAACATCAAGACAATCTATGGGCCGACTTTGTCGAAAGA
GTTACTGGAAGTTACTCACGAGGATACTCAGTACGCTTTCAAAATGCACG
CTTTTGTATCAAACGCCAATTACTCCATAAAGAAATGTACTCTGTTGCTG
TTCATCAACCACCGACTTGTGGAGTCAACGGCGCTTCGTAAGGCTCTTGA
TGCCGTGTATGTGAACTATCTACCCAAAGACAAACACCCTTTCATGTACA
TGAGTTTAGAACTAAATCCCATCAACTTAGATGTCAACGTCCACCCTACA
AAACACGAAGTGAAGTTCCTCCATGAAGAAGCTATCATTGAATCTATCCA
GAAGTGCGTGGAAACCAAATTGCTCGGCTCCAATGAATCCCGACAATATT
ACACACAGTCGTTGATACCGAAAATGTTGTCGGCTGGTGTTGATTGTCCT
GTTGCAGGTTAAACTTTTTACTTATTTGGTTACTTGAGCGGATACAGGCT
GTTACAGAATTATGTTTGAATAATTCCCTTTCGTTTAGATATTGTTCAAG
GTAACCAAAGCGATAAAAACAACAATGCGAATGAAGGAGAGAGCGAAAAG
AAGAAACTGTACGCCCATCAGATGGTGCGAACGGACGCACGCGAACAAAA
GATTGAAGCTTTCTTCCCCTACAAAGCGCAAGTCAAAAGTCCAACACAAT
GTTCAAAAGTGACGGAAGAAACGGTCAACCAAACTTCACATGTTAATAAA
GAAAATGTCGAAACTGATGGAGCTAGTAATGCAACAATTCTAACAGTTGA
TAGGTATTTACTCACTGAATGAACAATTCTCCTGAAAAGTGTCAGTTCCT
CGAGAACAGTTAAGGTTGATATCTATTCATACTTGAATATTCGAATTACT
CGCTCGTACATTACGTTATCAATTTCAATTCCGTATCGGTTTTCGGAATG
AATGCCAGTGTCAGTGATTAACTAGTTAGTCACTTTCTTACCCTTCTTTT
TCAAATAGTGAACTTCATGGAAATGAACACTCGAACACATCAAACCAAAA
TGGTATCCCTGATGACCAATCAGGTGGTCACTTGACTGAAGTCAATGAAC
TACCACGTGAAGAACGGAAAGAAAATGGTAGCGAAGGAGCAACAACGATC
AACTTGCTCCAAGATGAAGAAGGAGACGTCCAAATGAAAGATGTTGAACA
AAACACAAGAAGAGGAGACGAGCATTCAAATAATACGCATCAGAAAAGAC
ATGCTGCTGATGGTCTatatactttcattttcaatttctaaacaaCTGTT
TTGCTNATACGCATCAGAAAAGACCTGCTGCTGATGGTCTatatactttc
attttcaatttctaaacaactgttttgctattttttacaaattttcaaaa
aaatctcaacTAGTTGTTCTCATCGCTAACTCTTTTTTTGAATGAACGAA
TTCTTTACCTTTTTTAGTAAAGCAACCCGTTGCGAAATCGTCAAGCAAGA
TATCTTCAACAGCGTGTGATGAACGAACCATGAAATTGACCAGCATCCGA
AACTTGAGACGTCAAATTGAAGATAATGAACACTTAGGCGTGAAAAAGAT
TTTAGAGGAGCACAAATTTGTTGGCTGTGTAAATAGGTCTTTAGCTTTGA
TGCAACACTTGACGCAACTCTATCTTGTCAACgttcaaaatttaagtcaa
gAGCTTTTTTacgaaatcatcattttccGATTCGGAAATTTCGGATATTT
AGAATTGTCAGAACCGGCCCCGATTTTTGAACTTGTCCGGTTAGTTTTGG
ATACTCCGGAAAGCGGTTGGGAACCGGAAGATGGCGAGAAAGACGAACTT
GCGAAATACACTGTGGACTTGTTGAAGAGTAAAGCTGATATGTTGATGGA
TTATTTCTCTGTTGAAATCAACGAACAAGGAGAATTGACAGCAATACCTC
TTCTGTTGAGTAACTATACACCGAATTGGAATAAATTGCCCTTGCTGATG
TTGCGGCTTGCTTCTGAGGTTTGTTTGTTAAAATGGTTTATTACACTTTC
AAAGGGAGGTATTTTAAGCAAGAAGTAATTTTCGCGAGCAACGTGAATTC
TAAGAGAAAGTAAATATGTTCTTCTTACTTATGAAAAATATGCTTGGAAC
TAAtgtctatttttgaaaatcgtgaacagactttttGCAATACAGCgatt
tttctatcaattttgGCGATGAATAACGAGTTCTCGTTAAGGTAAATCCC
TGAAGTTTCCACTCTGATGACATAAAACTTTCTTTCAGCCGAGATAAATA
TTAGTTTAGTTTAGACAAAATCAAAACCTTGCCCGCAACAACATTTTTAA
CGGAATAACCTTTTCGACGGCATGTTTTTTGGAACAAAGTTGTTCAAATA
CTACATGATCTTCCTCCTTGAGGAGTAAAACATTCTACATTTGATCAGCA
ATCCTTCGGTTGAGTGAAACTTACAGTTATCTACCTTTTACTTGTTGACA
AATAAATGTATCATTTTGATCTTCCTCCTTAGGTGGATTGGGACAACGAA
CAGCAATGTTTTCACGATTTCGCGATAGAGTTGAGTGATTTTTATTCCAC
AGGAGGATCAAAACAACAAACAGAAGACGAGGATGAAGGAGAATGGAAGC
ATCAGATCGAACACCTCATTTTCCCTGCTCTAAGAAACACTTTCATCCCT
CCTAAACGTTTCTCTAATGATGGTTGCTTCTTAGAAGTCGCAAACCTGCC
TGACTTATACAAAGTCTTCGAAAGATGTTAGAATTAAAGAGTTTCTTTAT
GATTTGGTTTTATGTTAACTTTGTGAAGTTATGAAGAAAATTTCCCTAAG
AAGTTCTTTCGTGTTCACCGCTTCGATTTTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004712XLOC_004712Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008397-exon-sc0000085-1491911889:173451..173656TCONS_00008397-exon-sc0000085-1491911889:173451..173656Clytia hemisphaericaexon
TCONS_00008397-exon-sc0000085-1510915933:173451..173656TCONS_00008397-exon-sc0000085-1510915933:173451..173656Clytia hemisphaericaexon
TCONS_00008397-exon-sc0000085-1575043694:173451..173656TCONS_00008397-exon-sc0000085-1575043694:173451..173656Clytia hemisphaericaexon
TCONS_00008397-exon-sc0000085-1491911889:173787..174102TCONS_00008397-exon-sc0000085-1491911889:173787..174102Clytia hemisphaericaexon
TCONS_00008397-exon-sc0000085-1510915933:173787..174102TCONS_00008397-exon-sc0000085-1510915933:173787..174102Clytia hemisphaericaexon
TCONS_00008397-exon-sc0000085-1575043694:173787..174102TCONS_00008397-exon-sc0000085-1575043694:173787..174102Clytia hemisphaericaexon
TCONS_00008397-exon-sc0000085-1491911889:174217..174864TCONS_00008397-exon-sc0000085-1491911889:174217..174864Clytia hemisphaericaexon
TCONS_00008397-exon-sc0000085-1510915933:174217..174864TCONS_00008397-exon-sc0000085-1510915933:174217..174864Clytia hemisphaericaexon
TCONS_00008397-exon-sc0000085-1575043694:174217..174864TCONS_00008397-exon-sc0000085-1575043694:174217..174864Clytia hemisphaericaexon
TCONS_00008397-exon-sc0000085-1491911889:174946..174957TCONS_00008397-exon-sc0000085-1491911889:174946..174957Clytia hemisphaericaexon
TCONS_00008397-exon-sc0000085-1510915933:174946..174957TCONS_00008397-exon-sc0000085-1510915933:174946..174957Clytia hemisphaericaexon
TCONS_00008397-exon-sc0000085-1575043694:174946..174957TCONS_00008397-exon-sc0000085-1575043694:174946..174957Clytia hemisphaericaexon
TCONS_00008397-exon-sc0000085-1491911889:175901..176153TCONS_00008397-exon-sc0000085-1491911889:175901..176153Clytia hemisphaericaexon
TCONS_00008397-exon-sc0000085-1510915933:175901..176153TCONS_00008397-exon-sc0000085-1510915933:175901..176153Clytia hemisphaericaexon
TCONS_00008397-exon-sc0000085-1575043694:175901..176153TCONS_00008397-exon-sc0000085-1575043694:175901..176153Clytia hemisphaericaexon
TCONS_00008397-exon-sc0000085-1491911889:176359..176686TCONS_00008397-exon-sc0000085-1491911889:176359..176686Clytia hemisphaericaexon
TCONS_00008397-exon-sc0000085-1510915933:176359..176686TCONS_00008397-exon-sc0000085-1510915933:176359..176686Clytia hemisphaericaexon
TCONS_00008397-exon-sc0000085-1575043694:176359..176686TCONS_00008397-exon-sc0000085-1575043694:176359..176686Clytia hemisphaericaexon
TCONS_00008397-exon-sc0000085-1491911889:176818..177368TCONS_00008397-exon-sc0000085-1491911889:176818..177368Clytia hemisphaericaexon
TCONS_00008397-exon-sc0000085-1510915933:176818..177368TCONS_00008397-exon-sc0000085-1510915933:176818..177368Clytia hemisphaericaexon
TCONS_00008397-exon-sc0000085-1575043694:176818..177368TCONS_00008397-exon-sc0000085-1575043694:176818..177368Clytia hemisphaericaexon
TCONS_00008397-exon-sc0000085-1491911889:177883..178232TCONS_00008397-exon-sc0000085-1491911889:177883..178232Clytia hemisphaericaexon
TCONS_00008397-exon-sc0000085-1510915933:177883..178232TCONS_00008397-exon-sc0000085-1510915933:177883..178232Clytia hemisphaericaexon
TCONS_00008397-exon-sc0000085-1575043694:177883..178232TCONS_00008397-exon-sc0000085-1575043694:177883..178232Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000085supercontigsc0000085:173451..178232 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0.321751	0	0.179256	0	0.265319	0.608882	0	0.420054	0.33559	1.06014	0	0.677129	0.295282	0	0	0	0	0	0.487331	0	0.458294	0
Blast
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BLAST of TCONS_00008397 vs. Swiss-Prot (Human)
Match: MLH1 (DNA mismatch repair protein Mlh1 OS=Homo sapiens GN=MLH1 PE=1 SV=1)

HSP 1 Score: 541.576 bits (1394), Expect = 1.278e-179
Identity = 262/430 (60.93%), Postives = 337/430 (78.37%), Query Frame = 3 
Query:   84 IQKLDEVVVNRIAAGEVIQRPANAIKEMIENSLDAKSKSIQVTVKDGGLKLLQIQDDGCGIRKEDMHIVCERFTTSKLASFDDLKSIATYGFRGEALASISHVAHLTITTKTGDSPCAFKAKYEDGKMVPLQVGGKVEAKACAGNKGTQITVEDLFYNVAVRRKALRNTNEEHAKIVDVISKYAIHNPSVGFSLKKVGNSVGDVRTSPKSTVIDNIKTIYGPTLSKELLEVTHEDTQYAFKMHAFVSNANYSIKKCTLLLFINHRLVESTALRKALDAVYVNYLPKDKHPFMYMSLELNPINLDVNVHPTKHEVKFLHEEAIIESIQKCVETKLLGSNESRQYYTQSLIPKMLSAGVDCPVADIVQGNQSDKNNNANEGESEKKKLYAHQMVRTDAREQKIEAFF-PYKAQVKSPTQCSKVTEETVNQTS 1370
            I++LDE VVNRIAAGEVIQRPANAIKEMIEN LDAKS SIQV VK+GGLKL+QIQD+G GIRKED+ IVCERFTTSKL SF+DL SI+TYGFRGEALASISHVAH+TITTKT D  CA++A Y DGK+       K   K CAGN+GTQITVEDLFYN+A RRKAL+N +EE+ KI++V+ +Y++HN  + FS+KK G +V DVRT P ++ +DNI++I+G  +S+EL+E+  ED   AFKM+ ++SNANYS+KKC  LLFINHRLVEST+LRKA++ VY  YLPK+ HPF+Y+SLE++P N+DVNVHPTKHEV FLHEE+I+E +Q+ +E+KLLGSN SR Y+TQ+L+P     G+  P  ++V+   S  +++ +       K+YAHQMVRTD+REQK++AF  P    + S  Q + VTE+  + +S
Sbjct:    8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYRASYSDGKL-------KAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSVHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCEDKTLAFKMNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQTLLP-----GLAGPSGEMVKSTTSLTSSSTS---GSSDKVYAHQMVRTDSREQKLDAFLQPLSKPLSSQPQ-AIVTEDKTDISS 421

HSP 2 Score: 273.863 bits (699), Expect = 8.123e-79
Identity = 135/286 (47.20%), Postives = 186/286 (65.03%), Query Frame = 2 
Query: 1742 QKRPAADVKQPVAKSSSKISSTACD--ERTMKLTSIRNLRRQIEDNEHLGVKKILEEHKFVGCVNRSLALMQHLTQLYLVNVQNLSQELFYEIIIFRFGNFGYLELSEPAPIFELVRLVLDTPESGWEPEDGEKDELAKYTVDLLKSKADMLMDYFSVEINEQGELTAIPLLLSNYTPNWNKLPLLMLRLASEVDWDNEQQCFHDFAIELSDFYST-----------GGSKQQTEDEDEGEWKHQIEHLIFPALRNTFIPPKRFSNDGCFLEVANLPDLYKVFERC 2560
            + R  +DV+  V   S K  + AC    R + LTS+ +L+ +I +  H  ++++L  H FVGCVN   AL QH T+LYL+N   LS+ELFY+I+I+ F NFG L LSEPAP+F+L  L LD+PESGW  EDG K+ LA+Y V+ LK KA+ML DYFS+EI+E+G L  +PLL+ NY P    LP+ +LRLA+EV+WD E++CF   + E + FYS             G + +        WK  +EH+++ ALR+  +PPK F+ DG  L++ANLPDLYKVFERC
Sbjct:  472 RHREDSDVEM-VEDDSRKEMTAACTPRRRIINLTSVLSLQEEINEQGHEVLREMLHNHSFVGCVNPQWALAQHQTKLYLLNTTKLSEELFYQILIYDFANFGVLRLSEPAPLFDLAMLALDSPESGWTEEDGPKEGLAEYIVEFLKKKAEMLADYFSLEIDEEGNLIGLPLLIDNYVPPLEGLPIFILRLATEVNWDEEKECFESLSKECAMFYSIRKQYISEESTLSGQQSEVPGSIPNSWKWTVEHIVYKALRSHILPPKHFTEDGNILQLANLPDLYKVFERC 756
The following BLAST results are available for this feature:
BLAST of TCONS_00008397 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MLH11.278e-17960.93DNA mismatch repair protein Mlh1 OS=Homo sapiens G... [more]
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