TCONS_00008391 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008391
Unique NameTCONS_00008391
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2244

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008391 ID=TCONS_00008391|Name=TCONS_00008391|organism=Clytia hemisphaerica|type=transcript|length=2244bp
ATCTGCTCTTCTTTTCTAGATAAAAAATGGAAACTTTTGAGAACTGTCTT
CAAAGTTTGAAGCAGTCAAAATCAGATAATGAAAGGTTGGCAGCATTGAT
GGTCATTTCCAAACTGACTCAACCAACGTCAACTGGTTATTCTCCCAAAC
CATTGGAAATCAATGAGCAGTTAGCTGGACGTCTTTACAATGCAGTTTCT
GGAACATTCATTGTACGTTTGTTGAAAACATCAGAGAGCAAAGATGAGAA
TTCGTTACTTTTTCATCAGTTGGCTTTGAATGTCCTCACTGTGGTCGCTC
GTTATCATTCACATTCCATTTCTAAAGACGACTGTGTTGTGGAGCAACTA
GTGTCTTTGTTACACGAAACCACAAAAGTAGAAGAGCAGCAGAGCATTCT
GGACTTACTCACTGTTTTCCTCAAAGATTCCCATAAACTCTTACTCGATA
AGAATCCAACGAAGCTACTTAGTACGtctttgaaactttttaaagaGAAA
GAAACAGAGAAATCAGCTGAAATGTTTTTGACGATCATCATGTCTTCAGA
TTCTTGGTCACACCACTTGGCTATCATTATGTATGAACGTTGCGAAGTCC
TGCTCAACAATCAGGACCTTCAGAAATTCAAAGAGCTCGAAATTCTGGAG
AAATTAACCACATTGTTGAGACGTCACAATGCGAAGATGAAGTTGAACGA
agagaagaaaacaaagatgtTGGAAAACGTAGCATTAGCTGCGCAAGATT
TATTGAAATCACGTGTCAAGTCAGAGTACAAATGTTTGACGATTAGCCTG
GTATCCAACATGATACATTTCTTCGGACTAGACTGGATTTTCACAGTGAA
TGAAGActcttcaaaattttgcttGCTTTTGCTGGCCTGTATTTCTGTTG
AGCTAGCCTGGATATTGAATAGTGACTCTACATTAACTGAGAATGAAGTA
TTGGCAAAAGAACGTTTTGTGGTTGCTTGTTTCGAAATCACCAAAATGAT
TGTGGTTCGCATTTGTAGTGAAGAGTTTGAAGACAGTGAATTAGCGAGCA
ATAGCTCCTTTATTGTCAATCTGTTTAacactttcaaaaatatcatcaaC
ACCGTCTACTCGTTCATCCAAACTTTTTATAACCAAGATGCTTGTCTCGA
TCATCCGCTACTTCTCGGTGCTATGGATCTAGTTTGCGTTTGGGCAACCG
AGGAAACTGAATCTCTTCAAGAAGAATTGAAAACAACCATCcccattttg
ttgaaatttgctCGTGAGACATTAGAGAAGAAGAACAATGGCACAATTCA
CCATCTGTTCACATCACTGCTCCCCTGTATCGCGCAATTACTTCCCGATA
ATGATTTACGTAAATTAATGATTGATAATGGCCTTCTTGACCTTCTTCAA
AcgtttggtgacgtcatcaaaacggatgagaaagaaaatcaattggTGGA
GTGCTTTATCCATATTTTCCACGAGGTTATCATTTTAATTCCTACACATT
GTAAGCGTGTAACGTGGAAAGCAAGCCTTATTGAAAAGTTTGTCAAACTG
TATCACCAAGGCTACGAAATCAGAGGTATGTTTACATTATACAGTCGCGT
TGAGATGACAATAGTCCTATTGCGATTACCTGTATTATGTGGCTTGAAGC
tacccgacgaaaattttttacaaagtgTAACTGGGTTTTTATCGGATAAT
GTGGACGATCTTGAAGACATGGGCGAAAGCTACTCCGATATGTGGTCCAT
TGCAATGCAATCACTGTTGGAGGTAGTTTCCAACAATGACTTTGAGCGTA
ACAAATTGAAAGGAAGTTCTAGTGTAAAGAGAGCTTTATCTGAAGCTTCT
AAAAATGCGATGTCAAAAAACGTGAAATCTCTCATCAAGGACTTGCAAAG
AATTTTGTACACCTGAAaggtttgaattttcttttaataatttttcatag
aaaCCACAATAGATTTGTTGACATCAAGGAATATTATATACGGGAATTCT
TGATCAGGTCTTTCTTTAGTATTGAATTGTTTAATAAATTAACGAAATAA
ATAATGAAATACTATGTAAAATGATTAAGACTTAAGAGTAAAATACAATG
TTAGATCTACGTTTTCTATGTGCAAAGATTATTGATCATCAGCATCATCA
TTACTCGATCGCAGTCGAGCTGATTATTGATGATTAAGATTATTGATGGT
AGCCCACTTCAGGGTTGATTTTCTTAGCTTCGAAGTCTCAGTCA
Run BLAST on NCBI

protein sequence of TCONS_00008391-protein

>TCONS_00008391-protein ID=TCONS_00008391-protein|Name=TCONS_00008391-protein|organism=Clytia hemisphaerica|type=polypeptide|length=629bp
METFENCLQSLKQSKSDNERLAALMVISKLTQPTSTGYSPKPLEINEQLA
GRLYNAVSGTFIVRLLKTSESKDENSLLFHQLALNVLTVVARYHSHSISK
DDCVVEQLVSLLHETTKVEEQQSILDLLTVFLKDSHKLLLDKNPTKLLST
SLKLFKEKETEKSAEMFLTIIMSSDSWSHHLAIIMYERCEVLLNNQDLQK
FKELEILEKLTTLLRRHNAKMKLNEEKKTKMLENVALAAQDLLKSRVKSE
YKCLTISLVSNMIHFFGLDWIFTVNEDSSKFCLLLLACISVELAWILNSD
STLTENEVLAKERFVVACFEITKMIVVRICSEEFEDSELASNSSFIVNLF
NTFKNIINTVYSFIQTFYNQDACLDHPLLLGAMDLVCVWATEETESLQEE
LKTTIPILLKFARETLEKKNNGTIHHLFTSLLPCIAQLLPDNDLRKLMID
NGLLDLLQTFGDVIKTDEKENQLVECFIHIFHEVIILIPTHCKRVTWKAS
LIEKFVKLYHQGYEIRGMFTLYSRVEMTIVLLRLPVLCGLKLPDENFLQS
VTGFLSDNVDDLEDMGESYSDMWSIAMQSLLEVVSNNDFERNKLKGSSSV
KRALSEASKNAMSKNVKSLIKDLQRILYT
Run BLAST on NCBI

transcript from alignment at sc0000085:152615..159006+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008391 ID=TCONS_00008391|Name=TCONS_00008391|organism=Clytia hemisphaerica|type=transcript|length=6392bp|location=Sequence derived from alignment at sc0000085:152615..159006+ (Clytia hemisphaerica)
ATCTGCTCTTCTTTTCTAGATAAAAAATGGAAACTTTTGAGAACTGTCTT
CAAAGTTTGAAGCAGTCAAAATCAGATAATGAAAGGTTGGCAGCATTGAT
GGTCATTTCCAAACTGACTCAACCAACGTCAACTGGTTATTCTCCCAAAC
CATTGGAAATCAATGAGCAGTTAGCTGGACGTCTTTACAATGCAGTTTCT
GGAACATTCATTGTACGTTTGTTGAAAACATCAGAGAGCAAAGATGAGAA
TTCGTTACTTTTTCATCAGTTGGCTTTGAATGTCCTCACTGTGGTCGCTC
GTTATCATTCACATTCCATTTCTAAAGACGACTGTGTTGTGGAGCAACTA
GTGTCTTTGTTACACGAAACCACAAAAGTAGAAGAGCAGCAGAGCATTCT
GGACTTACTCACTGTTTTCCTCAAAGATTCCCATAAACTCTTACTCGATA
AGAATCCAACGAAGCTACTTAGTACGtctttgaaactttttaaagaGAAA
GAAACAGAGAAATCAGCTGAAATGTTTTTGACGATCATCATGTCTTCAGA
TTCTTGGTCACACCACTTGGCTATCATTATGTATGAACGTTGCGAAGTCC
TGCTCAACAATCAGGACCTTCAGAAATTCAAAGAGCTCGAAATTCTGGAG
AAATTAACCACATTGTTGAGACGTCACAATGCGAAGATGAAGTTGAACGA
agagaagaaaacaaagatgtTGGAAAACGTAGCATTAGCTGCGCAAGATT
TATTGAAATCACGTGTCAAGTCAGAGTACAAATGTTTGACGATTAGCCTG
GTATCCAACATGATACATTTCTTCGGACTAGACTGGATTTTCACAGTGAA
TGAAGActcttcaaaattttgcttGCTTTTGCTGGCCTGTATTTCTGTTG
AGCTAGCCTGGATATTGAATAGTGACTCTACATTAACTGAGAATGAAGTA
TTGGCAAAAGAACGTTTTGTGGTTGCTTGTTTCGAAATCACCAAAATGAT
TGTGGTTCGCATTTGTAGTGAAGAGTTTGAAGACAGTGAATTAGCGAGCA
ATAGCTCCTTTATTGTCAATCTGTTTAacactttcaaaaatatcatcaaC
ACCGTCTACTCGTTCATCCAAACTTTTTATAACCAAGATGCTTGTCTCGA
TCATCCGCTACTTCTCGGTGCTATGGATCTAGTTTGCGTTTGGGCAACCG
AGGAAACTGAATCTCTTCAAGAAGAATTGAAAACAACCATCcccattttg
ttgaaatttgctCGTGAGACATTAGAGAGTAAGTACTTCTTTATTCCTTT
TTATCCAAAACATTAATTTGTGAGgtcaattttatttcttaaaaggTTAA
CGTGATAATTTCTTATCAAACTTTGGTCTAAACTACAACAGTACATCGGA
AACTCTATTCAGCAGACGCCATCGAGGGGACGCATTGACGTCCGCTGATT
AGAAGGGTCTTTTGAAGGGTGTTGATTTACAAGCTCAAGTCTTGGAGATA
AATTCGTACTGGGGTGTCGCGAACATGAAATTTCTGAAAGACACGCCATG
GCCATGAAAGACACATCTTTTGAAACCGTCATTTTAGAATATACTGGCAA
ACGTATGTCAAGGGGAGGTTGTGGATTTATTGGTCCAGGAAATGTTTTCG
ATTCggcaaaggaaaattttctgaaaacaaaaaccaaaaaaaaagtggTT
TAAAAAGGATAATTTTTATTCGTTTTCTGATGTCGGAAATTAGTTTTGCC
CTCAATGTCTGCTAATTGGAGGGACAATAAGAAATAAGCTTTTGACCAAT
CTGTGTATACATTTTTATCCGCTGAAAGGAGATGTTATGTTAACCGCTAA
TCGCTTGCCCGCTATTTAAAGGTTGTAACTATAGAACAGTTCCCTtataa
gtcaaaaaaattattgtaaatGTGTCGATACCCCCTTAGTCCAATGGCCA
CCTGAGTTCACCTTGACATCGAGTACATATGGGTTTGAATCTGACGATGG
TAATGCTTTTTGGAGATAATACTCGACATTGTCAACGAAATCCTTTACAA
CACCAGTCGAGGACCAGTAAATGTTGTGCAGCATTCCTCCTCCATCAACA
ACTACTGCCTCAGGTTTGATTCCACGAGAACTCTCCTGACACTTAAGATT
TTTCATTAAGACCGATTTGCAATTTGAGTACCTGGGTTCTCCAGATTCCT
TGAATAGTGCAGTTGGAACAGAAGCTCGTAATTGAAGATGTCTTCGAATT
CCATTTGATTTGTTCCaagaagataatttttttttttttttaacatttat
tCGACgtcaatttttacaaaattgttcTTCCGTCTAAACTGagaattata
aaaatgaaaatgcaaaagatataaattattaaattattaaatatagtaaa
atttttatattgatttaagATGTAATTAAAGAATGCTAAAGACACAGGAC
TGGCAAGAGATTGAATTAAGGATGAGATATGAGGTATAGAGCTAGGCCTG
CTAGGAAGTCAAGAAAACATGGATGACGGTAAACAAAAGGCTGTAAGATT
AATaagtcaataaagaaaaaaaatatataaccgtaaaatacataaataat
taaaagtaacaaaatatttataatgctaatttggatttgaaattGATAAT
TAATAATTAAGATCGTTGGGTGACCTGCGGGTGAGAAAAAATTAGAATGT
TCATCGAGCTAGGTAGTATGGATTGGGGAAAAAGATAGATAACTAAATGG
CAGTGCTGAGCTAAAATTCAGAGAGTAGGAAAAAATCACAGGGATAAAAC
CCTGGCTAATGctttatcaaaataatattttttagctTCTTTATTAAATT
CTTCTAGAgtctttaaagattttatgtTTTCTGGCAGATCATCATACCAA
CGAGCTTGACATTGAAATGTACCATCATTAACAACTTTGACCATTGGTTC
TTTGAGTGTACAGCGAAGCTCTGCGAAGCTTCTTACTAGGGTCAGAGAAT
TCGACATTTAGATAACTGGGATGATTTTTATCTCGACGTGACTTGTGAAC
AATTTTAGCGGTGTTAAGTTCGATGTACTCTTTGACTGGtagccatttta
gttgaattaCGTCATTTAAAGTAGCGAATCGAGAAAGCACGTAGCCAGCT
GCAATATTTTGGATCTTTGGATAAAGAACACGGGAGAAAATGACGTCTGT
GTTGTAtccatttttttcattctttttctttgacCGTTTGTCGTTCACAG
ATTGCATGAGTATCACCTTTGAGGTGATATGGGCTCTAAATGAATCCGGA
AGATCTGCTTCTCACCAATCTCGCCAGCCTTATGTACATTTACAGAAGAG
TCAGATTCTTCTCCACTGTAGATGTTGAAGAGTATTAGAGGCATGGGTGT
GAATTTGAAGTGGGTGGATGCATTTCTCTAGAGCTCTTCTGATTTTCATA
GGATCGTTGTTATCTGATTTGATTCTTCCATTTCATTCTTCCTTGTGTTT
ATCATTGTCTGGTTTTCTTTTATCCCTTTGTTCACCATGTTCTGTAAAGA
GCTCTCCACAGATATGATGACTATTTGCCCAGATTGCCACTGTCCTTTCA
CTTGTGGTGACACCAATCATCCCAGTTGGTccttataaaaataataatga
agGTAAAATTTACCAATGTTAAATTTATCAAGGATAGTAGTTTGACCAGC
CTAGCCTGAATCAGCAACATTTGAAAATATGGTAACAAGAATTTGAGATA
CTTACTAAACAGTACCAGATCAGATTCGTGTAGTTTATGATGTTTTAGAT
AAAAATGGATTTACCTTTTCCTACTTTCGTGTAGGTTGATTCGATTGCCA
TATAATCCATATACTATTGTGGATCTTCCGTCTTTGAATCTTACCACACG
CTCTCCCTTCATAAACTGTTTCAGTAGATCGCTTGGCATCCTGTGAATTG
ATCTGAGGTAGACGATTCCATCATGCGCATAGTTCAGATGGCCAGCAGTG
AAGAAGTCCGGGATCATCTTTTGACAGCAGTACAAATGCAATCCAAAATC
TCCTTCTCTCTCTGCACGTAGGTATTTCATCATGAGGAACAGTGCACTGG
ATCAATGAGATTCGTTATCCAATGTTGTGCCAGCTTGCTGTTTTTTGATA
GATCATCTAAGGACTTGACTAGGTCTTTTCGGGTCGTATTTTCGTCGACT
AAGTGCTTTAGGAGCTCAAAAGCAACAATCCGGAGTGCTCGTACATTCAT
CGGATATTTTTTGCCGGTCAACATCTTTTCAACGCCTGCAAAACCTGCCA
AGTCCACTATTCTTCATGAGTTTTCCAACCGACCCAACGAAGCTGATGAG
CCAGTGCATCCCACCAATTCTTGGGTAGAAATTTTCCCATCTTGCCGGGT
CATTCCAGATGATGTCCATTGTGATCCTATGCAGCTGCTGATCACAGATG
AACACAGTTACCCTCTAACCTGCTTTGTTGGAAACACTTTAGACATTACA
CATGGCTATTAGAATCGTGGATGGATGTGATGGTGTTTGTTGATTAATGG
TTTGTAATTCACTGCTGTCATATTCCTTTTGGATACTCAATATCGAAACC
ATTTTCCCAATAGGGAAATCTGTTTATCTGGCGCTAATTCAAGCAAAAAT
TTAGTAGGAAGCAATCGCCTATATAACTATATTGTAGGTTTTAGATTCTN
CTGGCGCtaattcaaacaaaaatttagtaGGAAGCTATCGCCTATATTGT
AGGTTTTAGATTCTTTCAATTGTGGCTATTGTTCCGTCGATATAGATAAG
ATGTAAAATAAGATCTAAAATTTCTAAAGAATTTTTCCTTGTACTAAGAT
ATCTATATATATATCAAAACCCCTAGGATTATCATTTTCGCAATCTacat
aaaaatatctttcaaacgaGTACTTGACTATGTTTagacaattttttaat
tttttttcacgattttttgacatttttcatgTCATTCCTTAAAAACCATG
TAAAAAATTTCCCCCAAAGTTTGAGGAGGGTAAGTCTGGCTTTTTAGACT
CATTATATACCATAGTAATAGGAAATGCAATAAAAACCCATATGTACTCG
ATGTCAAGGTGGCCTTTAAAATTGCTACTTGGCCATTGGACTACCTGGAA
ACTAGCGTGAATTGCAAAAATACTCTTGGAAAGAATCTTTTTATACCTTT
TAAAAAGTGAGGGTGGATGAActgaaatcagtcttttaccccgtggaaat
tttagaataactttttacccgcttggaaaaatgaaaaaaaaaaaccctgg
aaatttttctcggattacCTTCTGGAAAttacccccctgtatggatataa
aatggaatggcccaatgttaTAATGTTTAATGTAAAATGCAGAGAAATGA
ATAATTTTTCCGCTGTTCTCATTTAGAGAAGAACAATGGCACAATTCACC
ATCTGTTCACATCACTGCTCCCCTGTATCGCGCAATTACTTCCCGATAAT
GATTTACGTAAATTAATGATTGATAATGGCCTTCTTGACCTTCTTCAAAc
gtttggtgacgtcatcaaaacggatgagaaagaaaatcaattggTGGAGT
GCTTTATCCATATTTTCCACGAGGTTATCATTTTAATTCCTACACATTGT
AAGCGTGTAACGTGGAAAGCAAGCCTTATTGAAAAGTTTGTCAAACTGTA
TCACCAAGGCTACGAAATCAGAGGTATGTTTACATTATACAGTCGCGTTG
AGATGACAATAGTCCTATTGCGATTACCTGTATTATGTGGCTTGAAGCta
cccgacgaaaattttttacaaagtgTAACTGGGTTTTTATCGGATAATGT
GGACGATCTTGAAGACATGGGCGAAAGCTACTCCGATATGTGGTCCATTG
CAATGCAATCACTGTTGGAGGTAGTTTCCAACAATGACTTTGAGCGTAAC
AAATTGAAAGGAAGTTCTAGTGTAAAGAGAGCTTTATCTGAAGCTTCTAA
AAATGCGATGTCAAAAAACGTGAAATCTCTCATCAAGGACTTGCAAAGAA
TTTTGTACACCTGAAaggtttgaattttcttttaataatttttcatagaa
aCCACAATAGATTTGTTGACATCAAGGAATATTATATACGGGAATTCTTG
ATCAGGTCTTTCTTTAGTATTGAATTGTTTAATAAATTAACGAAATAAAT
AATGAAATACTATGTAAAATGATTAAGACTTAAGAGTAAAATACAATGTT
AGATCTACGTTTTCTATGTGCAAAGATTATTGATCATCAGCATCATCATT
ACTCGATCGCAGTCGAGCTGATTATTGATGATTAAGATTATTGATGGTAG
CCCACTTCAGGGTTGATTTTCTTAGCTTCGAAGTCTCAGTCA

Coding sequence (CDS) from alignment at sc0000085:152615..159006+

>TCONS_00008391 ID=TCONS_00008391|Name=TCONS_00008391|organism=Clytia hemisphaerica|type=CDS|length=3780bp|location=Sequence derived from alignment at sc0000085:152615..159006+ (Clytia hemisphaerica)
ATGGAAACTTTTGAGAACTGTCTTCAAAGTTTGAAGCAGTCAAAATCAGA
TAATGAAAGGTTGGCAGCATTGATGGTCATTTCCAAACTGACTCAACCAA
CGTCAACTGGTTATTCTCCCAAACCATTGGAAATCAATGAGCAGTTAGCT
GGACGTCTTTACAATGCAGTTTCTGGAACATTCATTGTACGTTTGTTGAA
AACATCAGAGAGCAAAGATGAGAATTCGTTACTTTTTCATCAGTTGGCTT
TGAATGTCCTCACTGTGGTCGCTCGTTATCATTCACATTCCATTTCTAAA
GACGACTGTGTTGTGGAGCAACTAGTGTCTTTGTTACACGAAACCACAAA
AGTAGAAGAGCAGCAGAGCATTCTGGACTTACTCACTGTTTTCCTCAAAG
ATTCCCATAAACTCTTACTCGATAAGAATCCAACGAAGCTACTTAGTACG
tctttgaaactttttaaagaGAAAGAAACAGAGAAATCAGCTGAAATGTT
TTTGACGATCATCATGTCTTCAGATTCTTGGTCACACCACTTGGCTATCA
TTATGTATGAACGTTGCGAAGTCCTGCTCAACAATCAGGACCTTCAGAAA
TTCAAAGAGCTCGAAATTCTGGAGAAATTAACCACATTGTTGAGACGTCA
CAATGCGAAGATGAAGTTGAACGAagagaagaaaacaaagatgtTGGAAA
ACGTAGCATTAGCTGCGCAAGATTTATTGAAATCACGTGTCAAGTCAGAG
TACAAATGTTTGACGATTAGCCTGGTATCCAACATGATACATTTCTTCGG
ACTAGACTGGATTTTCACAGTGAATGAAGActcttcaaaattttgcttGC
TTTTGCTGGCCTGTATTTCTGTTGAGCTAGCCTGGATATTGAATAGTGAC
TCTACATTAACTGAGAATGAAGTATTGGCAAAAGAACGTTTTGTGGTTGC
TTGTTTCGAAATCACCAAAATGATTGTGGTTCGCATTTGTAGTGAAGAGT
TTGAAGACAGTGAATTAGCGAGCAATAGCTCCTTTATTGTCAATCTGTTT
AacactttcaaaaatatcatcaaCACCGTCTACTCGTTCATCCAAACTTT
TTATAACCAAGATGCTTGTCTCGATCATCCGCTACTTCTCGGTGCTATGG
ATCTAGTTTGCGTTTGGGCAACCGAGGAAACTGAATCTCTTCAAGAAGAA
TTGAAAACAACCATCcccattttgttgaaatttgctCGTGAGACATTAGA
GAAGAAGAACAATGGCACAATTCACCATCTGTTCACATCACTGCTCCCCT
GTATCGCGCAATTACTTCCCGATAATGATTTACGTAAATTAATGATTGAT
AATGGCCTTCTTGACCTTCTTCAAAcgtttggtgacgtcatcaaaacgga
tgagaaagaaaatcaattggTGGAGTGCTTTATCCATATTTTCCACGAGG
TTATCATTTTAATTCCTACACATTGTAAGCGTGTAACGTGGAAAGCAAGC
CTTATTGAAAAGTTTGTCAAACTGTATCACCAAGGCTACGAAATCAGAGG
TATGTTTACATTATACAGTCGCGTTGAGATGACAATAGTCCTATTGCGAT
TACCTGTATTATGTGGCTTGAAGCtacccgacgaaaattttttacaaagt
gTAACTGGGTTTTTATCGGATAATGTGGACGATCTTGAAGACATGGGCGA
AAGCTACTCCGATATGTGGTCCATTGCAATGCAATCACTGTTGGAGGTAG
TTTCCAACAATGACTTTGAGCGTAACAAATTGAAAGGAAGTTCTAGTGTA
AAGAGAGCTTTATCTGAAGCTTCTAAAAATGCGATGTCAAAAAACGTGAA
ATCTCTCATCAAGGACTTGCAAAGAATTTTGTACACCTGAATGGAAACTT
TTGAGAACTGTCTTCAAAGTTTGAAGCAGTCAAAATCAGATAATGAAAGG
TTGGCAGCATTGATGGTCATTTCCAAACTGACTCAACCAACGTCAACTGG
TTATTCTCCCAAACCATTGGAAATCAATGAGCAGTTAGCTGGACGTCTTT
ACAATGCAGTTTCTGGAACATTCATTGTACGTTTGTTGAAAACATCAGAG
AGCAAAGATGAGAATTCGTTACTTTTTCATCAGTTGGCTTTGAATGTCCT
CACTGTGGTCGCTCGTTATCATTCACATTCCATTTCTAAAGACGACTGTG
TTGTGGAGCAACTAGTGTCTTTGTTACACGAAACCACAAAAGTAGAAGAG
CAGCAGAGCATTCTGGACTTACTCACTGTTTTCCTCAAAGATTCCCATAA
ACTCTTACTCGATAAGAATCCAACGAAGCTACTTAGTACGtctttgaaac
tttttaaagaGAAAGAAACAGAGAAATCAGCTGAAATGTTTTTGACGATC
ATCATGTCTTCAGATTCTTGGTCACACCACTTGGCTATCATTATGTATGA
ACGTTGCGAAGTCCTGCTCAACAATCAGGACCTTCAGAAATTCAAAGAGC
TCGAAATTCTGGAGAAATTAACCACATTGTTGAGACGTCACAATGCGAAG
ATGAAGTTGAACGAagagaagaaaacaaagatgtTGGAAAACGTAGCATT
AGCTGCGCAAGATTTATTGAAATCACGTGTCAAGTCAGAGTACAAATGTT
TGACGATTAGCCTGGTATCCAACATGATACATTTCTTCGGACTAGACTGG
ATTTTCACAGTGAATGAAGActcttcaaaattttgcttGCTTTTGCTGGC
CTGTATTTCTGTTGAGCTAGCCTGGATATTGAATAGTGACTCTACATTAA
CTGAGAATGAAGTATTGGCAAAAGAACGTTTTGTGGTTGCTTGTTTCGAA
ATCACCAAAATGATTGTGGTTCGCATTTGTAGTGAAGAGTTTGAAGACAG
TGAATTAGCGAGCAATAGCTCCTTTATTGTCAATCTGTTTAacactttca
aaaatatcatcaaCACCGTCTACTCGTTCATCCAAACTTTTTATAACCAA
GATGCTTGTCTCGATCATCCGCTACTTCTCGGTGCTATGGATCTAGTTTG
CGTTTGGGCAACCGAGGAAACTGAATCTCTTCAAGAAGAATTGAAAACAA
CCATCcccattttgttgaaatttgctCGTGAGACATTAGAGAAGAAGAAC
AATGGCACAATTCACCATCTGTTCACATCACTGCTCCCCTGTATCGCGCA
ATTACTTCCCGATAATGATTTACGTAAATTAATGATTGATAATGGCCTTC
TTGACCTTCTTCAAAcgtttggtgacgtcatcaaaacggatgagaaagaa
aatcaattggTGGAGTGCTTTATCCATATTTTCCACGAGGTTATCATTTT
AATTCCTACACATTGTAAGCGTGTAACGTGGAAAGCAAGCCTTATTGAAA
AGTTTGTCAAACTGTATCACCAAGGCTACGAAATCAGAGGTATGTTTACA
TTATACAGTCGCGTTGAGATGACAATAGTCCTATTGCGATTACCTGTATT
ATGTGGCTTGAAGCtacccgacgaaaattttttacaaagtgTAACTGGGT
TTTTATCGGATAATGTGGACGATCTTGAAGACATGGGCGAAAGCTACTCC
GATATGTGGTCCATTGCAATGCAATCACTGTTGGAGGTAGTTTCCAACAA
TGACTTTGAGCGTAACAAATTGAAAGGAAGTTCTAGTGTAAAGAGAGCTT
TATCTGAAGCTTCTAAAAATGCGATGTCAAAAAACGTGAAATCTCTCATC
AAGGACTTGCAAAGAATTTTGTACACCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004711XLOC_004711Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008391-proteinTCONS_00008391-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008391-exon-sc0000085-1491911889:152615..153892TCONS_00008391-exon-sc0000085-1491911889:152615..153892Clytia hemisphaericaexon
TCONS_00008391-exon-sc0000085-1510915933:152615..153892TCONS_00008391-exon-sc0000085-1510915933:152615..153892Clytia hemisphaericaexon
TCONS_00008391-exon-sc0000085-1575043694:152615..153892TCONS_00008391-exon-sc0000085-1575043694:152615..153892Clytia hemisphaericaexon
TCONS_00008391-exon-sc0000085-1491911889:158041..159006TCONS_00008391-exon-sc0000085-1491911889:158041..159006Clytia hemisphaericaexon
TCONS_00008391-exon-sc0000085-1510915933:158041..159006TCONS_00008391-exon-sc0000085-1510915933:158041..159006Clytia hemisphaericaexon
TCONS_00008391-exon-sc0000085-1575043694:158041..159006TCONS_00008391-exon-sc0000085-1575043694:158041..159006Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000085supercontigsc0000085:152615..159006 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.99583	8.51734	3.05961	2.51055	8.91045	7.13405	8.78624	8.49836	8.40074	6.51464	7.29472	7.04776	8.18583	8.11575	7.37511	8.35019	6.66152	8.41073	3.03933	3.0253	6.23671	5.59597	10.3144	11.0674	12.0543	13.1136	2.58176	2.39815	5.72764	5.95385
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR008709Neurochondrin
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008391 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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