TCONS_00008302 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008302
Unique NameTCONS_00008302
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2131

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008302 ID=TCONS_00008302|Name=TCONS_00008302|organism=Clytia hemisphaerica|type=transcript|length=2131bp
GAAACTGCGAATGGATTCACTTTTCAAGAGAAGACAATCAACCGTTTAGA
ACTATGTAAGATCCACACTTGCCAGCGCTGCGGGAAGTCCATCACAGACG
AATTCATATTACGTTTATCTACATCATCAGAATGGCATACTCAATGTCTC
AATTGCGAAAATTGCGGAGATAATCTAAGTTTTTTGGATTCATGTTATGT
AAGAAATGGCCGACCCTATTGTAAACAAGATTACCAGAGGATGTTTGGTA
AAACATGTTCTGGGTGCAACGTCAAGCTGAACGAAAATGACTttgtgatg
aaaatcaaatctCACGTCTTTCATCCGGAATGTTTCCGTTGTATTATTTG
TAATGTTATCTTGACTTCTGGTGATTCTTTCCGGTTTAATCTCAACGGAA
TCGTTTGCAAACAACATTTTGATGCTTTCCAAGGAAAACTAAATGAAGAT
ATGAAAGACCCaagtatttttgatgacgaCAGCAATAATTTCGATCACCA
GCAGCAACCGATTAAAAATGGCGCAGATAAAATGAAACATGAGAATGGCG
TTAGAAAGGAGAATGTGGGCGAACACAATGGGAAGTCTACTGTTGACGCA
TGCGCAAATGAAACATACAAGCCGACAAGAATTCGGACAGTGTTAACGGA
CAAGCAGGTCGCCATCTTGAAGACATGTTACACAGCCAATCCACGGCCAG
ACGCTTTGATGAAAGAACAATTGGTGGAAATGACTGGATTGTCTTTGAGG
GTGATCAGAGTATGGTTTCAAAACAAACGGTGCAAAGATAAAAAGAAATC
CGTCACCATAACGGCTAAACGAAAATTCGTCAATTCGTACGACACAGTCA
CTCTTTCAACTGCTGCTGCAGCAAACTCATCCCCATACCTCCCGAAAAGG
ACTGAGAACCAAATTCTAAACAACCAATGGGCTTCAGTTGCTAACCAAAC
ATACAGTCGTCATGGaacaattcaaaatggtagTTATCAAAGCTACCTCA
TCAATAATGGTGGATTGGACAATGGGTGGTATGAAAAAgaatctggtctg
caaaatatGCAACATCAAACTCCAAGTCCTTCATATTCGACACATGAGGA
ATTGGATCTAGCAACGAAAACGTCATCATCACTCAAACCGTCCGAGTTTT
TCCAACTCATAAATTTGCCAAATAGCTCAGCAGAGATCAGTAAGAAACAT
TCGCCCACTTTCAACGCCAACACGCCCGGAGATACATCTTTATACAAGAG
CAAACAATCCGCCCATTCTCACATCAGCGAACTAGGGTGGTCTGAAAGCG
AAGATGATCACACCACCCACAGCCGCCCTACTGCAACGAGTGCATCTGGT
TTCTACACACCTTTCCAAACAATTGCGTAATCAGAAGGAAGTATTGCGTA
ATGATTGCGATTGAGAGAGGAAAACGATGCCAGCTTTCACAACAGAGATG
GGTACGACAAGATAGTATCAATCGAATAATGAAGGAACCAGCTGGAAGGC
TGTTCGATTGTCCAAGTGGCTCCAAATATAATAAAACGTACTCACGACTT
AAAGCTCGAAAGCTACACTTAAAAGCTCGAAAGCTACACTTAAAAGCTCG
AAAGCTACACTTCAAAGTTTTGCTACACTCAGCTGGTACATCAATTAATG
AACACTTTCTTTAAATGAAACTTATTTACGCGGGAACGAATCATTTTAAC
GCTTCCATTTTGGTAACGTGAAAGTTAGTTCCCGCAAAACTTAATTATTG
CAAATATTATCAGCATTTTCGAGACAAAAACCCTACaaagatgaaagaaa
tttgtcaaaaaagagCAAAACGGCGAAAATTAATACAGTTggacaatttt
gttaatttgttatgaattttatgagattttatttttcgaggattagccat
aatttcatgccaaacttatatctaccgactcacacttacttctcaGCCGT
CTGACTACTTGATCAGTATCTACCCCTAATCTAGGTCATAtgcaaatgga
aagttaaataTGAATTTTATGAGATTTTGTATTACATAACGTGTATTTAC
CGATAATTCTAAACATAAGTTTTTCAtgacatttttggaaaattcaagGT
GAATTATGTTTTTTGACAATTTACAGTTTTT
Run BLAST on NCBI

transcript from alignment at sc0000084:624046..641327+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008302 ID=TCONS_00008302|Name=TCONS_00008302|organism=Clytia hemisphaerica|type=transcript|length=17282bp|location=Sequence derived from alignment at sc0000084:624046..641327+ (Clytia hemisphaerica)
GAAACTGCGAATGGATTCACTTTTCAAGGTTAGGATTATTGAACTTGAAG
CCTATGGAAGAGAAACTTAAAAAAAGGATCAATTTGTTTGGTAGCACATA
TTTTATGATGGATAAATGAGCCGtgcatttttttaaaatctgCTAGTGAA
GTTAAAGTGTCAAAACGACGTGAGCCGTACGGGTTGTTGTAAGGTCCcga
tattttcatttctttgcaTGGAACTTTGAGTTTAGCATTCTTTGCCTGAA
AGATAAAAACCGGAACCGAACGAAACCAAACATCTTTGATGTTGATGTGT
ACAGGGTGAACTTTTCTGAAATATGATACCACGGGTGGATGAGATAGCCT
TTACCCGCGATACGGTACTTATCTCCTTAAACAATAATCAGATTAAGTTA
GCATTCCTTCGCGATGGACATTACTGTCGATTTCAACGTACGGGGTGCTC
TCAGGTTAAGATGCCAGGTATCGCAGCTAGACAAACACCCTGTATTTTAG
GTTTGTTTATTCTGGTGTCAGCACTGACTGTAGTTTATTGGGTCAGGTGT
GTTTTTAAGCGTGACACTTAGTTGCAGGGCGGAAACGCCACTCACCGCAT
GATTCTCTGTGAGATTGTATCGGCTGAAGAGCTCCCCAACATCTTCCCTA
ATTTCCCAACTTGGCTTGCTTGGTTGACCCGGGCCAGAATTTGTGgggga
gagcagatttttatgagacggtaattatctttttgtattatgaatagata
attactgtgtcataaaagtCTGCTCTCTAacattttgcgcccctcctgtc
tacgctactgcggAAATAGATTTTCATACATATCTGCCATTCTGTTGAAC
AGTAGTGTTTGATTAACCAGTGAAttcgaaaaaagtaaaaaagtaaaaaa
aaaatccaaagaatCTTTTATTTATGGGCACCTTCCCGCTCCGAACCACC
TTTTCTCATCAGGGAACTGTCTACGCTAGCTTTTTCGTCGGCCCACAAAA
CTCAAGCCAAATCTCATATCCCTTTATAGAGAATGAAATTTCAGACTGAA
ACCCAAATGAATCTTATTTCTTTGTTACAGAGAAGACAATCAACCGTTTA
GAACTATGTAAGATCCACACTTGCCAGCGCTGCGGGAAGTCCATCACAGA
CGAATTCATATTACGTTTATCTACATCATCAGAATGGCATACTCAATGTC
TCAATTGCGAAAATTGCGGAGATAATCTAAGTTTTTTGGATTCATGTTAT
GTAAGAAATGGCCGACCCTATTGTAAACAAGATTACCAGAGGTTTGTGTG
TGTTTATTTCCCTCTCTACTTCGATCGTCAACCAAATCTCGTGTATTTTA
TTCGAATTGAAAAGGAATTTTGATAGTGCGccatacccctgtgtcacata
cccactgggaccccagcccactggaaaatttagcaaaaatttcgtccccg
gtgggaaaataccctggaattctAGCCCCAcagggaaattgactttgatt
tcatccccactattgcactccaaaatcatccccactggattttttaacat
tagaacaatagaatttttatccccattgaagaaaaaagttcggccggggc
tgtgagacaggggtgttacgCCGGGGATTTTTCCCTCTTCAAACATTAAT
AGGCTCTTTCATTCAAACTGGATTTGAGTGACTCGAAATCTCGAATTATT
TTTGGTGTAAAAgggatcaaaatttttttggcctGAACATCAATGTTCGG
GTCAAGTTCAAAATCCTGGCCCGAACATGCGCGGGTTAGTTCGGATCATG
TTCGGGACTTTTTTTCAGTTCACAACAAGTGACCCGAAAAAGTTTGGGCC
ATACAGTTAACTTTCCATAATGAGAGAGAGAGTATGTTAAGAGAGTTTAC
GAAGATTCGAAAAACAGAAGggcgaataagcgagagtccaTTGTAGCTCC
GAGTTGTGAGTCAGGCACATAAGTCAAAACGACTTTATTTTTAGGGCTCT
TAATACCTTAGTGTGGGCCGGCTGAGATATTACAGTTTTAGATTTCAAAT
TATTACAATTACTATTtgtaatcgcacgatgggttattttttcttatttg
gcacgtcCTCagagagagcaattaatcgttaattgcatcctgtagagagc
aatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTCTCAGTatgttttaaa
ggttttctttttacataagtgtttccgtttcatatcagacacatatttca
tatcagggcagtgtctgtctattgttatattatgctgatataagccaaaa
ggtttttcttttccacattcgtgtcaattcaatatcaaaaagatggaaaa
tcaaaattgatgagtaagcaaattttaattcaatgtgaaaaagctcgtga
attaaaattgatgtaagcaaacgatatcattcttatttaaaaacaaaacc
tttaactagTAAGGAAATATAAGAGACCTAAATATCATTGGGATGGAAAT
TCAAGTTCTATTTAAAGGTTGGCACCCGTTGAAAAGAGTTCTTTTAAGTT
TGGCTGAAGAACATGATTTCCATGGAAACTGAAACATTCGATTAGCATAT
GTATAATCGTTTTTTGTATAAGCCAATTCATGGTTAAAATGAATTATAGG
CACCATAACCACCGCGCTCTGATAACCACTTTATTGCTGTTGTTTGAACA
TATTCTGTTGTATTTatctactctaaggtcccgaataaacTTCCCCTACC
AGctaataattttcgaaaatttttctgaaaacccACCCACCCCGTTCTTA
TTAGGACCCGTAggaattttgttgttttctgattttgagTCGGAGTATGA
ATCAGGCTTAATTTCTTTGGAGCGttcgaaatttgccatttcaattccat
tttattattttgttttagcaCTTGAAAGCTCATAACATTTTCGGATTATT
CATCACTCATAAATCATTTCGACCGTTAAACAGCAAATTTCCCGCCAAAT
TATAAAACCTTACATAATTTTTATGATTTAGGATGTTTGGTAAAACATGT
TCTGGGTGCAACGTCAAGCTGAACGAAAATGACTttgtgatgaaaatcaa
atctCACGTCTTTCATCCGGAATGTTTCCGTTGTATTATTTGTAATGTTA
TCTTGACTTCTGGTGATTCTTTCCGGTTTAATCTCAACGGAATCGTTTGC
AAACAACATTTTGATGCTTTCCAAGGAAAACTAAATGAAGGTGAGCCCTT
TTTGAAGAGATCCGTTACTTGTTCTGGTACTTCcactttttatacttttt
aaacATACTCAGATATATGTTTAATATGATGCTTGTCTAGACGCTAGacg
gtaacagacgaacgataACTGGATGCTTCAGAAGGAgacccggaattccc
gagttattttttccgagttacgaaaaaaccgagttatcccgagtgatgac
gtcatttttgttaTTTAGGGACATCATTTTTACATatcataactcggttt
attttctATAAGGAGCATGAATCCGTAAGCAAGCAACCTagggataactc
ggttttttcgtaactcgtttttttaactctgaaaaaataactcgggaatt
ccgatTCTCCTTCAGAGGGGTATCCGGAGGAAAAAATTATCTTGAACCAC
GTTTTCCAAAGAGGGGAGAAAGAACATTTTACTGATACTCATAATTCCCA
GAATAATTCTAtaatatatacagttgacgctctctaattcgatcttcaag
ggaaattggattttcatcgaataagggagcgtcgtttcttgttgacggtg
gctctcaatattatcgaataagtgagcctatcgaatagtagaacgtcgaa
ttagagagcgtcaactgtattggGAATAATAAAATTTACTTGAGCAAAAC
ATGAGAAAAgttaaagaacatccaaaagtttcagaaattttggatgttct
tataaaaaacgtgtaatggaGAGATCAAGACATGCACAATgaataacacc
cccttctcacagacctgccaaagacccggtaggattcttTCAGCCAGTTG
GGGTAAAAACGGGACTGAAACACAGTAAACAGTCCGTCCTCGCAGATTCA
ATTTCAGAGAACGTTAAACTGTATTAATTCACGGTATTAATCGTTGTAAA
TTCAAACTGTAATTTTAGATATGAAAGACCCaagtatttttgatgacgaC
AGCAATAATTTCGATCACCAGCAGCAACCGATTAAAAATGGCGCAGATAA
AATGAAACATGAGAATGGCGTTAGAAAGGAGAATGTGGGCGAACACAATG
GGAAGTCTACTGTTGACGCATGCGCAAATGAAACATACAAGCCGACAAGA
ATTCGGACAGTGTTAACGGACAAGCAGGTTTGAATGTTATTTTTTAAGGA
ATACTTTCTTCTATAGAtggatagagtcgatattttacgtgaatagccca
gtaatctaggacttttagacagtctttcgattgttttcatggggtccacg
gccagccggctcggctatttATGAACNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNagaaagtggaagtgctaaaatagtaattct
cgcccgaactttaaattctgaaaaacattaaaatacactaaaatctcaat
atatttcgaccatgattgtacccATATAATCCAACAAGACGGTACTAATT
CTTTTCCAGGTCGCCATCTTGAAGACATGTTACACAGCCAATCCACGGCC
AGACGCTTTGATGAAAGAACAATTGGTGGAAATGACTGGATTGTCTTTGA
GGGTGATCAGAGTATGGTTTCAAAACAAACGGTGCAAAGATAAAAAGAAA
TCCGTCACCATAACGGCTAAACGAAAATTCGTCAATTCGGTATAATGGGT
TTTATATTATAAGTTTTGGTTTTAAACTGATGTCAATGATTTTTCGAGCC
ATATCTTTTTACttttaacttgaaaaagaaaaacaacttgaaaaagaaaa
acgaaacaAAGACTTTTGACAATCgactcgaattagagagagatcCGAAT
TACAGGGAGTCTAGTATACCATTTTTGAGAGCATTAAGAGTCAAAGTCTT
AATTCGAAATTTGTGAACCAGTCTCTTTTTcacctaattttttttgatca
aaattgaaaattaatccacgtcAAATTTAATCCGCTTAAGGTAGTTTTAC
TTTTAGGATTCCAATGGAAAGTCAAAATGtaaccaaaaatctttttgaat
ttaCAGTACGACACAGTCACTCTTTCAACTGCTGCTGCAGCAAACTCATC
CCCATACCTCCCGAAAAGGACTGAGAACCAAATTCTAAACAACCAATGGG
CTTCAGTTGCTAACCAAACATACAGTCGTCATGGaacaattcaaaatggt
agTTATCAAAGCTACCTCATCAATAATGGTGGATTGGACAATGGGTGGTA
TGAAAAAgaatctggtctgcaaaatatGCAACATCAAACTCCAAGTCCTT
CATATTCGACACATGAGGAATTGGATCTAGCAACGAAAACGTCATCATCA
CTCAAACCGTCCGAGTTTTTCCAACTCATAAATTTGCCAAATAGCTCAGC
AGGTAAATAACTTTAGCTTACCATTAGGTTTTAAAACCCATCAGGGTCCT
GCGGATTCTTTGGATAAAGAAATGAggttttctagaaaaaaattgtcgaa
GAATATTCTAACTTAAGCAATTTAAAAACTACATTTAGTATGTAAAATAA
ATAANTATTCTAACTTAAGCAATTTAAAAACTACATTTAGTATGTAAAAT
AAATAATCCACTTTAACCTAGAAATTGATGATTGTTATGTGATATTTCTC
AATATCTTGGCTATCAAAGCCATATCTTCTCctgtctgttcttataaaaa
ctacTGTTAAtgtaagtttttttataagaacaattaggATCGAAAACTCC
AAAAACCAGACCCCATTACTCGAACTTTCCGAACCACTTTTTTACTCGAA
CTTACTCGAACAAGTAAAGAAATCAAGATCATAAGTTAGACTATGTTCGA
GTAATTAGCCGAACTTACTCGAACTTTGGATTCTAAGGTATGTTAAAGTT
CGAGTAAACATTTCTTCAATCGAACTTCTCCAACTTCTCCAACTAATCGA
ACTTCTCCAACTAATCGAACTTCTCCAACTAATCGAACTTCTCCAACTAA
TCGAACTTCTCCAACTAATCGAACTTCTCCAACTAATCGAACTTCTCCAA
CAAATCGAACTTCTCCAACTAATCGAACTTCTCCAACTAATCGAACTTCT
CCAACTAATCGAACTtctcgaactaatcgaacttctccaactaatcgaac
ttctcgaactaatcgaacttctcCAACTAATCGAACTTCTTCAACTAATC
GAACTTCTACAACTAATCAAACTTCTACAACTAATCGAACTTCTACAACT
AATCGAACTTCTCCAACTAATCGAACTTCTTCAACTAATCGAACTTCTAC
AACTAATCGAACTTCTCCAACTAATCGAACTTCTTCAACTAATCGAACTT
CTCGAACTTCTCGAACTtctcgaactaatcgaacttctcCAACTTCTcac
agatttttgaaaatttccagaaGCTCGAGTAAAGGAATTACTCGAACTTT
ACTTGTTTGAATAAGTTCGAGTAGTTTGAATTTCGAATTGTTCGAGTCTG
GcataaaatttacaatttaacaaaaaaagcAAATTAATGGTCAAAATACT
TGAAAGGCATGATCACCCAAAACACCTCAATTTTGCCataaaaaaggata
aaaacTACTTGAAGCTCATAAGATTatacaatgttttttcttcacaCAAG
CTACTTTATTTTTCAGAGATCAGTAAGAAACATTCGCCCACTTTCAACGC
CAACACGCCCGGAGATACATCTTTATACAAGAGCAAACAATCCGCCCATT
CTCACATCAGCGAACTAGGGTGGTCTGAAAGCGAAGATGATCACACCACC
CACAGCCGCCCTACTGCAACGAGTGCATCTGGTTTCTACACACCTTTCCA
AACAGTAAgcgttttgtattttttttaaatctttaattttcagCTTCAGT
CAAGTAAGAATCTGAGCATAAGACTTTGTaagatttttctcttttagaTC
TTAGGCTATAAACtcgtacacatttttttataaacaaccgTGTTGCTAAG
GGTCAAGCCCTgagaatggccaaaaaattaagcaaCTTGGAAAATTAGCA
TTTCCCTGGAAAGCAACTGAAAATAACACTCACAGATCCGCCACAGACTC
GGTAGGGACTGAAACACAAATTCAGAGAACGTTTAACTGTGATACTCGCG
GTATTACTTCTCATGAATTTAAACTATATTTACCTGGAAAGCAACTGAAA
ATACCTAAGAAATAGGCTTTTTGGACATAAGTTGGCATTGAAATTTgtac
tttcgcggggattaaatttcacggttaagcctatccgcgaaattcaaaaa
tttcgcgggtggcactattgggtggcaatattttctcgattttgtgactt
ttactgtcaaatcatgccatattggttgttgaaatacacattatttgcgc
ctcttttgatgcaagtaaccattgtctttatttgacatattttgagtttt
gtttagaaatattttgcggatgaggcccttccaactttccaatgggactt
aattcaatccccgcgaaagtttatcccattaaagtaccaaatttgaggta
ttttggacataaaatgagataaaaagccaaaatttttgaaatttgtttgg
AATTTTTGGGTCAAAATTCATTAGCATTTTTTTACTGAAATCccaccctc
gactccatggcttatctaacccccttacgctattgatgattctgatggac
gcgttgacgggggatataagccctggtacACATAGAAAACGAANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNAtaatgacggataggaaaaaaaatcttgtcCGAACTA
CGGATGgtttatatcatttttcaacaaaaacaaatacaaaCTAGCCACAA
CCAGACTGTCAAATGTTTAAGCCAAACTGTTTCTCCAAAgcaaaacagaa
tatgcaagaGGATCACTTGTCACTTTCTTGATTCCTTTCTCATTGAATAC
GAAGAATGTTCTTCTGATTAAGCAAAATGCCATCGGAATTTCATACTGCT
AACGAACACTATAGAGGGAACTAAACAAATTTGATGCTGATTTTCTACTG
CCTGCTGCTGATGAATGAATAAAGACATAAGGACATAagaactatgtaaa
aggtcctATGTCTACGTATAATTATATCTCTGGTACTGATGTCAGCTAGC
ACTCAATGGCTGAATGCCAATTGTGTTCATCGATCTGGTTGGAAGAATTG
GAAGTTGCCTTCTTTAGAAGTGGGAGTTTTAAAGACATATCCATAAAATG
AAATGGACTTATATGGATTGAATAATAAAGTATTATAAGAATATAATCTG
CTCTGGGTATACCTACAACTGAACTTGGCTTTACTTTTTATGTCCTTGTA
TAACTTTGTGTACGTAACCTGATCCCTTACCCAAGTGACAGTAAAAATAT
GGATTGACGTGAAATGTTTATAATGAGATATGGATTTGAATAGCTTTATA
TAAATGATAATGACTGAATGATATTTGGGGAACGTTGAGATAATGTGCTG
AAATATTCTTGTATTACTCTGTACATATCTTTTGACACCTGAGTGAAACT
ACCTGATACCAATGACTGACATTGTTGAACGTTTGAATGAGAATGGTGAC
tactaatttttatcattttggcacttgggaaaattttcaacattttttca
aaatacaccTGAATGATAATTATAAAAACACAATGCCATTATGTACATTT
TGGACTAAATTTGATAATAAACTTGCCAAAATTGGatataatattaatat
ataatttttattttatacaaactttgaacatttcaaccttttggaaataa
acaaaaaggcaATAATCATGTTACTCAGtacaattttaaacttttgtgTT
TGTCAAAtctcaaatgttttgaatatttctaaagatcaaactaatttttc
aaacaaattcagaagattgaatcaaaaatgaattttcagattAGTTCAAG
CTCTTTTATTTTGATCCAAATGATTGGGGAATTTATAACAATAACCTTTC
TGTTTTGGAAAGTACAAACTTCTTGACTTTTTTCCAAGATTTCTACATTA
TtctgtattttttttgttttttttgaaggaaaataagttTCTTCCttaga
aaatagaaatttgtacTAGTATTTTAAGCATTACTGTTtatgttttgaaa
gaaaatgatttttctgcatttttaaagaaaaatgtctCTGTATTCTTATA
GGAAActcaatttttgtattttgcaagGAAACTTACGTCTGACTAGCAGT
TTGCTTTGAATTgtggtaaaatttgaaaaattgaaagacattttttttta
cttttaataaaaaatgaccCTCTCCAAGCAAATTTTCTTACCaaactttt
ctttcaaagaaatagAAATCATTTTCTACATTTCcccccttttctatttt
ttcagacTGCTCAAGAAACGAATTTCTTTTCTGCTGatttctaaatttct
aaaaactTGCTAATTTCCTACAAGGTTGGTCacccagaaagttttaaaag
aatgtGATGagatttgttaaaaatcaatcaaagtttaTGCTGCCCCTTTT
CCATGGTTTTCCTTGATTTCCAGTCTCCTAGGAatcttttttatcctttt
tcagGATCTTGCTTCTTTCGTCCAAAAATCCTGCaacaaaaaagaatgaa
atataATATTGCCAAACAAGAGCATACcttaagtgtattaattttggcgt
gtacttaatttggcggttgagcGACAGGctaattttggcgggtatttaat
ttggcggttgatcaattttggaaattttggcgggtatttaatttggcgga
tgacaaaaaaaattaaaattatgcttggataaaatgttcttgaataatcg
aaataaacaattaaaaacaGATTTTGCGTTTAAAACGcgatttttgttaa
tttatgcgggtatttaatttggcggttgaccgactttgaaaattttggcg
ggtatttaatttggcggatttcgcctaaaaccgccaaatccgccaaattt
aatccccgccaaaattaatacacttaagGTAATTTTTTGGAATGAACAAT
CGCAGATTTGGGTTccatttgaaaagttttattagGTCCTTTAAAAATCA
AACCTATTAAATTATTGATTTGTTGAAAGATTGACATGGAAAGCTTCAAA
TAATAAAAGGGACAACttacataaaataaataaaactttcatTCTCTGGT
AAGATAATTCTTGTTAACCGTTAGCCTTAATGGactacaattttgaaaaa
ttaccctGATTATTAAAATGGATTAAAATACAAttacaaacaacaatcaa
tattatTATGTTGTATAAAAATTCCTTTAAACACCTCTTTTACActcaat
tttcatattttggataatttcataattttgtaaAGAGATCCTGTGAAAAG
TCAATTTAAaatttcccgccaaatttaaattttctcaaatcgaTTTTTCA
CTATTTAGACGTCATAAAAGGGggtatttcaaacattttcaccttaattt
taatagaccttttttcaaagaggccaccctgttgaataattatgtagtcc
agcagaaaaacaatgataaaaccatgcataattattacaatatgcatgat
attGTAATTATgccatggctctatcattgtttttatggctggactacata
attattcaacaggacgtcctctttgaaaaaaggtctatccttGAAACCCA
TCatatgccaaattaaattcccgccaaaaattcttccttttttttgttca
gtattcttgaatagaaaaaatctaATCTTGACAAAATCAATTCCAGCGGA
AAATCTTACTAATTTCACAAAATTATAATTTCCatcatgcaaaatttttg
actttgatacAAGATTCTTGTAGAATCCctccagtagcgtagacaagagg
ggccCAAAATTCGTGTAGAAGAGCAGACTTTCATGGCatagtaattatct
attcataatataaaaatataattattgTCTCATAAAAATCAGCTCTCCTA
CAAATTTTGCACCCCTCCTGTCTACGGTACTGCCCTCTAGAAAATCTGGA
AATAACCCAAAATCttgaatgtgtttttttttttttttggaaaataatta
tacttttgggcaaaaattagtatttttatagtatttttaatataattgat
gtAAATTAGCATGCAAGATCTGAAGATATACTTACTGTCaatggctctaa
cttgggacagtctgataaaacatgggacagcaattcggccatcaTTTTac
agaacctccaaagtcatttaatcaACACAATCGCAAATCTCATAGAAAAC
AACTTTGTTGTCAAgaaagatttaacagtaagtgaaaatacagaccagaa
agtcaaccatcccattatatgaccactcgtcccaagttagagccgttgac
agtacacaggaaaaaattcagaaaaattccttgtgactttttagtgaatt
cacaTTGAAACTAGGTGAAAAGTTGCAACCTTTCAACAATTCACAGCTTT
TTTGAGTGAATTATTGAatgattgcagcttttcaccatGAATTCACTAAA
ATGTCACGGTGATTTTTCCTGGTTAATTAAACATTTTCATGAATAGCAGC
ATTAtagttttcatgttttcattatagttttcatgtttttgttttatgtt
ttcataAATTTGATCTGCAAAGTAAACATTGTCAGGtgtccatcatcatc
atcataatattttctttttctcgtaaatcttatcatttgatgtccacaat
ataatatttaaacaATGGCCATGTTCGTTATTGCAAAAATCCTTTCAGTG
TCTTTGGCTGCCAAATGTATAAATACTACGATCCATGTACAACTATTTGC
AGGACAAAAATGTCattctaaaattttaaacatgtacgTTAACACCAAAC
TAAGCAATGTTAATTTTAGCAACCAGAAATACCAGGGCTAAAAAACACAG
TAATCTCTCAGAGTTTTTTATAACTCAATTCAACGAAAATGAAGTTTATT
CCATAAATTGGTTGATGTTACGTTAAATCTCATCTGATAAATTCATTCTT
CAGTTTGCCAGTGTTGCATCTTTCACAGCGGCAAAAAAGCAGCTGCCATG
ATGTGATTTGATAAATACGCTTTTAGGTTAACATTACTGCATGGGCTGTC
TGGTGGGGCTCGCTGGTTATATAAGACATTAGTAGTCAATCAGCTACTCT
TCAAATTGCCATTGGAAAATAATAAGCATGAGATTTGTTTTATTCTAACA
ACTTctctaaaaataaagaacacAAAGCTCATAATTAACAGCAACTAAAT
TCAGGGCTGAAATTAGGACCTGCTGTCTGAGTCTAAACATGACTAAAGTC
AGTCAAAGAGAAAGaggcaaaagtcaaaaacacaccatccacatccagga
aaacattaacatttatgatgattttgactgaattagataattttgagcca
gtaaaacTAAAACTCACACAGACAGTTTAATCAATATATAgtgtaaattt
ttattgagaGAAAAACAGTCAAAGTTCCAATATTAGTCCAACACTTGCTT
AATCCATCAAAAACGAGAAACTAACTTTTCAAGATATTGGTTTTCATTGC
CGTGGTCGTACAGCGTAAAGCTATTCAcagtattttgatgaaaattataC
TAGTAAGTGCGTTCGCAGCTCGATTTTCTGTCTTCCCGAAATCTTTCTCT
CACTCACTCAGCCagagtccaaaggtcgaaaaatatcaagattcttgATA
TTTTCTCTTCCAaagtaccagggccctaaacgattcctccaattttacgg
tactggcctctttaagtcgcagaatcgtttatcggccctggctcgcgagg
gtgctGAAATCCGGAAAATCCTTAGCAACTGCGGCCCTGGGCCGAAAATT
GAggttggtttaaaaaaaaatgtgtacattaGGTCCATGTCACCCATTTT
TAGTGATTGtttgacactttttgaaaaactgtaacttttgatctactaat
ttttttaaatatttggaATTAGAAATTAGACGTAAAATTTaaccaaaaaa
ttttccagGTTGTAACAAAATCTTCGAATTATCCGGGCCACCCTAACATG
GATTTTCTCTTTCTATCCTTAGATTGCGTAATCAGAAGGAAGTATTGCGT
AATGATTGCGATTGAGAGAGGAAAACGATGCCAGCTTTCACAACAGAGAT
GGGTACGACAAGATAGTATCAATCGAATAATGAAGGAACCAGCTGGAAGG
CTGTTCGATTGTCCAAGTGGCTCCAAATATAATAAAACGTACTCACGACT
TAAAGCTCGAAAGCTACACTTAAAAGCTCGAAAGCTACACTTAAAAGCTC
GAAAGCTACACTTCAAAGTTTTGCTACACTCAGCTGGTACATCAATTAAT
GAACACTTTCTTTAAATGAAACTTATTTACGCGGGAACGAATCATTTTAA
CGCTTCCATTTTGGTAACGTGAAAGTTAGTTCCCGCAAAACTTAATTATT
GCAAATATTATCAGCATTTTCGAGACAAAAACCCTACaaagatgaaagaa
atttgtcaaaaaagagCAAAACGGCGAAAATTAATACAGTTggacaattt
tgttaatttgttatgaattttatgagattttatttttcgaggattagcca
taatttcatgccaaacttatatctaccgactcacacttacttctcaGCCG
TCTGACTACTTGATCAGTATCTACCCCTAATCTAGGTCATAtgcaaatgg
aaagttaaataTGAATTTTATGAGATTTTGTATTACATAACGTGTATTTA
CCGATAATTCTAAACATAAGTTTTTCAtgacatttttggaaaattcaagG
TGAATTATGTTTTTTGACAATTTACAGTTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004661XLOC_004661Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008302-exon-sc0000084-1491911889:624046..624073TCONS_00008302-exon-sc0000084-1491911889:624046..624073Clytia hemisphaericaexon
TCONS_00008302-exon-sc0000084-1510915933:624046..624073TCONS_00008302-exon-sc0000084-1510915933:624046..624073Clytia hemisphaericaexon
TCONS_00008302-exon-sc0000084-1575043694:624046..624073TCONS_00008302-exon-sc0000084-1575043694:624046..624073Clytia hemisphaericaexon
TCONS_00008302-exon-sc0000084-1491911889:625126..625336TCONS_00008302-exon-sc0000084-1491911889:625126..625336Clytia hemisphaericaexon
TCONS_00008302-exon-sc0000084-1510915933:625126..625336TCONS_00008302-exon-sc0000084-1510915933:625126..625336Clytia hemisphaericaexon
TCONS_00008302-exon-sc0000084-1575043694:625126..625336TCONS_00008302-exon-sc0000084-1575043694:625126..625336Clytia hemisphaericaexon
TCONS_00008302-exon-sc0000084-1491911889:627827..628035TCONS_00008302-exon-sc0000084-1491911889:627827..628035Clytia hemisphaericaexon
TCONS_00008302-exon-sc0000084-1510915933:627827..628035TCONS_00008302-exon-sc0000084-1510915933:627827..628035Clytia hemisphaericaexon
TCONS_00008302-exon-sc0000084-1575043694:627827..628035TCONS_00008302-exon-sc0000084-1575043694:627827..628035Clytia hemisphaericaexon
TCONS_00008302-exon-sc0000084-1491911889:628964..629172TCONS_00008302-exon-sc0000084-1491911889:628964..629172Clytia hemisphaericaexon
TCONS_00008302-exon-sc0000084-1510915933:628964..629172TCONS_00008302-exon-sc0000084-1510915933:628964..629172Clytia hemisphaericaexon
TCONS_00008302-exon-sc0000084-1575043694:628964..629172TCONS_00008302-exon-sc0000084-1575043694:628964..629172Clytia hemisphaericaexon
TCONS_00008302-exon-sc0000084-1491911889:631805..631984TCONS_00008302-exon-sc0000084-1491911889:631805..631984Clytia hemisphaericaexon
TCONS_00008302-exon-sc0000084-1510915933:631805..631984TCONS_00008302-exon-sc0000084-1510915933:631805..631984Clytia hemisphaericaexon
TCONS_00008302-exon-sc0000084-1575043694:631805..631984TCONS_00008302-exon-sc0000084-1575043694:631805..631984Clytia hemisphaericaexon
TCONS_00008302-exon-sc0000084-1491911889:632352..632697TCONS_00008302-exon-sc0000084-1491911889:632352..632697Clytia hemisphaericaexon
TCONS_00008302-exon-sc0000084-1510915933:632352..632697TCONS_00008302-exon-sc0000084-1510915933:632352..632697Clytia hemisphaericaexon
TCONS_00008302-exon-sc0000084-1575043694:632352..632697TCONS_00008302-exon-sc0000084-1575043694:632352..632697Clytia hemisphaericaexon
TCONS_00008302-exon-sc0000084-1491911889:633962..634149TCONS_00008302-exon-sc0000084-1491911889:633962..634149Clytia hemisphaericaexon
TCONS_00008302-exon-sc0000084-1510915933:633962..634149TCONS_00008302-exon-sc0000084-1510915933:633962..634149Clytia hemisphaericaexon
TCONS_00008302-exon-sc0000084-1575043694:633962..634149TCONS_00008302-exon-sc0000084-1575043694:633962..634149Clytia hemisphaericaexon
TCONS_00008302-exon-sc0000084-1491911889:640568..641327TCONS_00008302-exon-sc0000084-1491911889:640568..641327Clytia hemisphaericaexon
TCONS_00008302-exon-sc0000084-1510915933:640568..641327TCONS_00008302-exon-sc0000084-1510915933:640568..641327Clytia hemisphaericaexon
TCONS_00008302-exon-sc0000084-1575043694:640568..641327TCONS_00008302-exon-sc0000084-1575043694:640568..641327Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000084supercontigsc0000084:624046..641327 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.76648	0.627253	0.400755	0.422315	0	4.9945e-08	2.92842	4.12698	1.27109	0.00211256	1.41718	1.08308	5.68614e-05	0.0441854	0.15759	0.163731	0.502789	0	0.0856021	0	0.809429	1.64708	0.915725	0.0440743	0.179106	0.43859	0	0	0	0
Blast
[Close]
BLAST of TCONS_00008302 vs. Swiss-Prot (Human)
Match: ISL1 (Insulin gene enhancer protein ISL-1 OS=Homo sapiens GN=ISL1 PE=1 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.627e-66
Identity = 108/250 (43.20%), Postives = 150/250 (60.00%), Query Frame = 1 
Query:   61 IHTCQRCGKSITDEFILRLSTSSEWHTQCLNCENCGDNLSFLDSCYVRNGRPYCKQDYQRMFGKTCSGCNVKLNENDFVMKIKSHVFHPECFRCIICNVILTSGDSFRFNLNGIVCKQHFDAFQGKLNEDMKDPSIFDDDSNNFDHQQQPIKNGADKMKHENGVRKENVGEHNGKSTVDACANETYKPTRIRTVLTDKQVAILKTCYTANPRPDALMKEQLVEMTGLSLRVIRVWFQNKRCKDKKKSVTI 810
            I  C  CG  I D++ILR+S   EWH  CL C  C   L    +C+VR+G+ YCK+DY R++G  C+ C++  ++NDFVM+ +S V+H ECFRC+ C+  L  GD F    +G+ C+   D  +          S+   D  +  H  +P++  A+ +       + +V +   K+            TR+RTVL +KQ+  L+TCY ANPRPDALMKEQLVEMTGLS RVIRVWFQNKRCKDKK+S+ +
Sbjct:   14 ISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIRLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADHDVVERA--------SLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKT------------TRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKRSIMM 243
The following BLAST results are available for this feature:
BLAST of TCONS_00008302 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ISL11.627e-6643.20Insulin gene enhancer protein ISL-1 OS=Homo sapien... [more]
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