TCONS_00008261 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008261
Unique NameTCONS_00008261
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length912

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008261 ID=TCONS_00008261|Name=TCONS_00008261|organism=Clytia hemisphaerica|type=transcript|length=912bp
ttccaGTGTGGAATCCATGCAAAAGCCACACCGAAGATATTTTGAGGATC
AAGAAGGTTACACCCAATTAAGGGCATTctcacgccgaatatattcggcg
tactGTGTATGAATTCCAGACTGGGGTGTATTCATGGAAGATCTTTCAAT
ATTTAGAACAGACCCCCCAACTTTCAGGTCAAAGACATTCATCACTCATG
TTGTTAACCCAGTTGGAACGTCATTCAACCATCCATTTCAAAGATAGCTT
TTGGGAGGTGCTTCGTGTCTGAACTAGAACCGGATAACACGACTGGAACA
CTGATATCAAAGCTGAGAAATTTGGGAAATTGCAGatttgGTGGAATGTG
TAATCTCATCAGAAGAATGCAGCAAGATTTTCACCGGTCAAGGTGGTGTC
ATCTTAACACCGGACTACCCGAGCGAATATCCGGACGAACTTGCTTGTTC
TTGGGCCATCAAGGTTCCGGCAGATAAACGAATCAAGATCTTTTTCGAGG
ATTTTCAATTAGAAAAGGCTGCTTCATGTTTTGATCaacttgttctaaga
gatggcGTCGATGGACCTTTCTTAGGAGAATTTTGCGGCACAGATGCCAA
AGGAATGACTGTGACGTCATCAGCAAATACTCTCATGGTGCAATTTGTAT
CAGATGGTAGCGTCGGTGATCGCGGTgtcaaaattgtttgggagcAAATC
CCCAAAATCACTATCACAGATATTAATAAAGTATCATTCCAAGACCCATG
GCTTGGTAAAGTATCGCCAGCCGGTGTAAAGATAATCGAGAGTGGATTAT
CAAGTATGAGTATATGGATTGTTGATCAGTTTAATGATGTCCATTATTAT
GATGGTTTCTCCTGGGACGTTCTTAAAGGTAAAGCCAAAACACTGAGCGT
TGGCGAGACTGN
Run BLAST on NCBI

transcript from alignment at sc0000084:128827..148044+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008261 ID=TCONS_00008261|Name=TCONS_00008261|organism=Clytia hemisphaerica|type=transcript|length=19218bp|location=Sequence derived from alignment at sc0000084:128827..148044+ (Clytia hemisphaerica)
ttccaGTGTGGAATCCATGCAAAAGCCACACCGAAGATATTTTGAGGATC
AAGAAGGTTACACCCAATTAAGGGCATTctcacgccgaatatattcggcg
tactGTGTATGAATTCCAGACTGGGGTGTATTCATGGAAGATCTTTCAAT
ATTTAGAACAGACCCCCCAACTTTCAGGGTACTCATTTTATACACAGAAC
AGCTCAAACAGTGTGATCATATCTTCAAGTGCCAATATTCCACTCCGTAC
ACCCTTTCAGCTGGAAATATAAGCCTAGAACAGATAATGAAAATTACCAT
CAGTTGGTCCCAGTggagttggtctaatctcgacatccctctcttctaat
ttcgacgcCCTTTTtcagagataggaataataggaaggtcaggATCACCA
TAGCTGTCACATTTGCCTTGCAAAAATGTGGGAGAGCTTCTAGTCAGAAA
AACTTTCCCcgataatccaatttttctgaatcggaaaatcaggaaatcga
GGGAATTTCCCTGTGAAGTctgattttattggaaattttttttggaaaat
cggaGAAATTCAGGAAATTTTGACATGCCGCTTTctgaaaatctgatttt
tttgcaggaagtcggaaaatttttcgaaatgcGGGAAATGCgggagaaaa
tcctgaaaatgcagGGAGATTTAGCTGAATTATTTTCCTGTGGGAAAAAA
TATCAGCATGCGGGAGTCTCCGGCCcaatgcgggagagttgacagctagg
atcactgatagacaaaagatttctTCCTCCCTGATCGCTAAGCAAAAAAG
ATTCCGATTCCgaccttcatattattcctatccaTCTCTGAAGAAGGGTG
CCAAatttagaagagggatgttgacattagaccaacttacggtagtttTC
TtggaattgaaaaagaaaaatctataGAAAAGATCAACTTTCAGACTTTG
ATTTCTATTTAAAACAGATCTAAATTTCAAGGTAGGtagattttaagaac
agatcTACATTTTCCTCCAGGACGGCGTGaggtgtcaaaattttttccgA
TATCCTTTAGCTTAGGCTGACATACCTTGGTTCAGAACAAGCCTGTACAA
CTTccaaaaaagtgacaaaattgaTTGGGAAGCTATTAACATAGAGTTAT
ATCCTATCTTATCTCTTAGTTATTATTATCTGGACACTAATTTTGATGAC
CCAAATTGTTAATACACCAGTTTCCTGGAAAAATGCCTACTGTGAAAAAG
CATTTTACCAACTAGAAATccgccaaaaaaattttcaaaggttcCAAGAG
ATCTTTGTATTCTTATGAGGAAGCCTTTGAAACTCTCCCCAAAAAGAATT
TTAGAAgtaacaaaataaaacagaaaataccataagttggtctaacaTTG
ACTTCCCTCATCCAATTTGGAAACcctctttagagacaggaataaccAGG
GGGGATCTTTCATAAAACTGCTAAAGCTATTATAAGAAGGgggaattttt
taaagaatggaTGGGGGTGGAGCTGGAGGTCCTCTTTTGATTCCAAATTG
GAAGTTCTGGTTCTGTCTCGCCAGCCATGAACCTTAGACAGCTGTTTTGG
AAAACATAGAGTTTATCAATATCTCTCTTTTTGAGGGATTAGGTTTCACA
GGCATAGATAGTTAAATTGGTATTATCAGCGCGTAAAAAAGTCTCAACTT
GATTTAGTAGGGGAGGGAGGTCATTTCTAGACAAtatgttttgtttcaat
ttaCCAAAAGCAACTAATGCTTTAAGCTATTTTCTGCATGCAACATCATC
ACTAGTTACTTTTACTTTTGGTTACTTCGAGCATATATTATTTCTGGCAA
AAATCTTTTGATCCACACCACACAATCTTTATCAAATCCACAAGTCCTGA
AGACAAAATGGAAAAGCAGAGAGattttgtttctaaaaattgagtttgAG
TCAACTCTCCTAAACTCTGCATAACCACCGAATTGAACTAATTAAAATTA
TATCcagtgaatttttgaatttatccgttgatatttttttcaagtttcta
ATGCTTTGCTCCTTGTATTGCTGGGATGCGTCAATTTTTAGGTATCATTG
ACCTGATATGATTTTaatacaaaattgtttacaGTTTCGATTTTCTTTCC
ATCAATGAATATCGAATCATCTTCATTTGACAAAACTTCATATCTTTTCA
TGTTGATTTTCAAAACCtcattttccagtgggaagggttgccagtggatc
tgtgagaagggggtgtatttctCATCAGAGTTTCGAGTAGGAAAGATATA
TTAAGTGTGTTTGAAGNtttattttttttattttccaatttatttAACGT
TGGTCTGACATAGTTATAATTAAATACTAATTAATACCAACTATATAGAA
TACAATAATATANtccagtgggaagggttgccagtgggtctgtgaaaagg
gggtgtaTTTCTCATCAGAGTTTCGAGTAGGAAAGATATATTAAGTTTGT
TTGAAGATGCTCTTTCCATAGATTCAGGACAGTATCAGGGTCATGCTTCA
TTCCTTTTGAGTCTTTTACATTGCTCAGAGACTTCAAATNCAGaatgata
aattaaaaaaaaagaaaaaattttatgtacatattttacaaagacaaata
tttttaagatttaatttttctttcagtgagGATTTAAAAGATTCAATAGA
GGATTtgagcttaatattttcaggaatttGATTCCAGAGCAGGCTTCCTC
GAAATAAAAAGGNAAGAGGTTGTGCctatcattttttgaaagtcttcgTC
CAATTTGTTAATTTTAGCTGTAATATTATCCGTTTTCAGTCTTTTGACTG
ACGATTTGACTATATTATTGATCTCGATATGCGTTTCTTTGGCAGTTGGC
GAGTTTGGTAATTTAATAAAGTgcaatcatagtataagaaagccgcggct
ggaatgatctgaatttctgttgttctatctctgtcgtatttgatgagtat
ttttgttgatcaagaaaccAGTAATACaacatctttaatggtaaatttta
ttggtttgtcgttgatacttacttctcagtgcgttttagacattaatgat
atgcccttgataatacacttgcattataaaatgattgtaaaggaaaaatc
aacaataagaaatttaaacaagcacaaaatggcttggttgaaagaactca
aaaattaataaagtgcctcgaaatgccttcacaatatttcagtaaaatct
ttttagaaatcaaatgaaaaagtacatcaagataatactgtgaaaatttc
aagccaacgccttcaaaagttatcattcaaactgacaggaaagttgtcat
cttgaatatagttcttataattttaattttggcaaaaaactattgtttcc
acaaaatacccctgaAACATGTCCAAAAATCAGTTCAAGTGTTTCATTGG
GTACAGATTCgaagatatctagcaataaaaaaactttttgtgaaggaaaa
taaaacaagacgacttaaagtcgaaaatttcgcctaaagtttaaactgca
tgagaaaaaacaagaagtagagatgaaagctaatctgaagtctactttac
atcgacCCTTGATGAAACTATTTGATATGagcaacgaggctcaaaatcgc
taaaaagataagatcaatttacgaacaatggttgtttaattcttaagaac
taataactgaAGGGCATATCACCATCTATAAAGAGTNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNtcatattgtgcgccatcccttattta
ctttgtaagaactaattaccgaaaggtatatcacagtctatcaagagtta
ttgatttgattcttataaagtgtatgcatataagaaaaataaatatgctc
atattgtgtgccatcccttgtttactttgtaagaactaattacggaaggg
tatatcaccgtttatcaagagttattgatttgattcttataaagtatatg
cttataagaaaaataaatatgctcatattgtatgccatcccttgtttact
tcgtaagaactaattaccgaaaggtatatcacagtctatcaagagttgtt
gatttgattcttataaagtatatgcttataagaaaaataaataNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNaattaccgaaaggtatatcaccatcta
tcaagagttattgacttgattcttataaagtatatgcttataataaaaat
aaatatgctcattttgtgcaagagttattgatttgattcttataatataa
agtatatgcttataagaaaataaataaaaaatccaaactgtgaagctaaa
ggacactaagatatatgacgtaatccaaagaaaacccgcgaaaatcgtcc
gtggttatacgagcgtataatttgtaaattaaatttagtgagttcgtcca
ccgtatcgagtactttttAATTTAaccttgatgttcttataaagctcgga
gacagagatagaacagcaattaactgaaaagacaatgcggtacatattcc
agctgCGGCTTTCTTACACTATGGTGCAATAAATGACTTTAACAGTGAAT
CAATTTTCTTCCTCAATGAATTAATAAGCttcgaaaaaaatctgaaaagt
gAAATTCTCCTATATTTTAGTCAAAGACATTCATCACTCATGTTGTTAAC
CCAGTTGGAACGTCATTCAACCATCCATTTCAAAGATAGCTTTTGGGAGG
TGCTTCGTGTCTGAACTAGAACCGGATAACACGACTGGAACACTGATATC
AAAGCTGAGAAATTTGGGAAATTGCAGGTACCATTTTTGTTTCATGTGCG
ACTTTCAATATTGCTAACTTAGCCTAAAAAACCAAGCCAATAAACCAATA
TATGAATTGAGACCAATTTACACATAGTTTTCTGGGTGGTTCAAACCCCC
TATAATCAACCCCCTAAAGGCCAAAACCACCCCCTCGCCCTTAATAACTG
AGTTAGTAAACCCTGTGATTAATTTTTCGACTGAGAATGACACTGATAAT
GNtgatttgattcttataaagtatatgcttataagaagaataaatatgct
tatattgtgcgccatcccttgtttactttgtaagaactaattaccgaagg
gtatatcaccgcctatcaagagttattgatttgattcttataaagtatat
gcttataagaaaaataaatatgcttatattgtgcgccatcccttgtttac
tttNtaaaaaattttgaaccccTCCCTTTATAACCATACTCCCTAAATGC
CAACCCCCTCTAATTATTGAGACTTTTTCAAACCCCCCTCTTACAGGGTT
GTCTGAGAATTTGAAGACCTCCCCCCCCCCTATGCTCCGGTCCgtaaaat
aaaagtaatttGCTACATTTGAATATCGATGTGATgattcttttcattaa
aaaaagatatatgTTTGGTACTACAACGAGAAATTAAATTTATCTCGCCT
AAGTTTAGCTCTTTGTGGCTTTTAACAACTATAAATCTGACTAGACATTC
AATAGAGCCTCAAAGACAGATTATCAGCGAAACTACAGGTTTGAGAAAAA
CCTCAGATCTGTGGTCGGATCAGCCTCTATACTTTAAAGATCTAACATCA
ATTCTCACATCTTTAGCCTGGATTATGGTTTGAATTTTTGGTCGttacaa
aatttaaagaaaCTCGACAACGAAAAGCATCatgattgatttttctttaa
atgttGATGTTGTTGTTTTCCGACTTTTAAAAGGTTGAATTCGTATTTGA
AATTAGCCTGGACATCCAGTCTGAATACTCGCTTTTTTAATTTGATGTTT
CTGGTTtactaccgagtttatgtatcgaaggatatcgagggcggcggtaa
gtgaaatgatacaaaacaaagtcgatagttgatgaaCGGCTCtttatcgc
ctttgctcacctaaacagacgacggtattttggtgtttttaccgtcgtcg
agcaaagtggacggtgattttggagacatgtcaactttgctttataacGT
CcacctcgatttatctcgaatacataaactcgctactacCTAGGGAGGGG
GGGCATACCAGTTTGTCGGTGTGTCggtattgacctttttttgcgtcggt
atttcggtgatcAACAAAAAATGTGTCTGTATCTCGGTGTTTAAGAtgct
tttcggtgacggaaaGATTTTCAATCGGTGATACGGTAATTTTGCTCAAA
ACGTCGGAGAAACGGTGCTAAATCAACGGCTATCTCTCAGAAATCCTCTT
ATTCTCTTCGTATCGGTTTTTCGTAAAAAACtctcggtatttcggtgtcc
agaaccctcgtacgccccccactacCTAGTCTCCTAAATCGAATTTACAT
TCTCAACAGAATCGCTTGCTGTCAAGAATTTTAGCCTATCCTGCCTACAT
AGAGGAGTTTAAGGAAGCAGTAAGCaaggaaaatatgaaaataaaaagtc
tACAGTTTGGATATcttgttattttgaaataatcatGAACCACCAAATGC
AGAGGCACCGCGGCAATTTTCGCCCGTCGGTCCCacccatggtggcgcct
ccttagtcagTATATCGTGGCCCTATCACTTTGAAAGTGGAGCCGCGGCC
CCTGAAATGAGGCTGTAGGCATCATTTAAGTTCAACTAAAAGCGAAAGAA
CTGAttgtattcaaaaataaaaaaggaaattatGATATCATTCCACCTGC
TGAGTTTGTGAAAGTCATTATTTCCATCATCCAAAGTGATTTTTAATGGC
TTTCATAGTGGTGTAATAAGTTTTAAGGGAGTACCTTCTTTTAACCTCTT
GCGGTTCCTATTAACTTTATCATGTCTTAAAAGTTAATGAgtgtaaataa
aattaaaggGAGGTCATCATCATAATAATGTCATCAGGCTAAGAGGCTTT
ACCGAAACAAAAAAAGTGACGTATAGTAGAAGGATTTAAAATCATCATTT
CTCTTAagtgtttttatatatttttgtctTGTTTCTTTATAATTCTTTTT
CCTCCTAGAGACTGACGCTTTTATAGTCGTGAGAAAGTAATATCCTTTAT
CGCTCTTTTTTTGAGGCAGGCTGGAAGTGACAGCATTATATTGATAAAAG
GGCCTGacttttcaacacttttttgatttttttttgttgctaatGGAATT
TTCTTTTGACACTGAATGGGATGGTATCATATATTATTTCGGCGCGTGAA
cagtttttctgttttctttctcGTTTCTCTgaagtttatttattttagtt
aAGTAGAGTCTAGAGATTGATCGAGTGCATTGCTTTGATTACGATTCATC
AGTAGTTTAATTTTGGAGCCGTTGGTTGTATCAAAGGCAGCTTTTATAAC
CCAAATTCATAAAGtgtataaatattttaaagttaattATTAGTTCCGTG
attatcgaattagagagaatcatTGTATTTGTAAATCACAACAAAGCTGC
TTGTATTGTATTCTTTATTATCGGACTTAAAGCTTCAAATCCAGGCTCTA
AAGAACTGTTTTCTCGGATAGAAGAATGATACAGTCCAGTCATTCCTTGT
TTTGATTTCAGGCTCTAAAGAATTGTTTTTTTAGATATAAGAATGTCAAA
TTCCACGTTTAGCCATTCTTTCAACATGAGCTTGCACTAAATCATGAAAG
TTAAATGTCCTGCCTCGTTAGACTACAATtttgacatttaaaaaatataa
agttgcTATATCTTACTGAAACACGGTTATGGTTCACAATGTGTTTGTTA
TGGCACTCTGTTTTCAATAGAGTAAAGGTTGCTAAAAGTTCCTTGTATGT
TATCAGTAGCAGTGAGTGGCACCCCTTTCTTCAATGAACACATTTCAGGT
CCTCGGCGGAGAAGTGTCAACAAACGTTTGTTTTTGTCCTCAAGCGCATT
ATGATTTACTCCATCGAAGAGCTTTTTCGATAACACCTTAGTCAACATCT
TGCCTAAACTCAATGTTTCCGACTCAGTTGCTTACATAATATTCTCTACG
GCGAGTTGATGTCACCAGTGGCGCAGCTCCGATTTTTTACGTTACCGCCT
AATATAGACACTTTATGCGTTTTCTCCAGAGAGGATATTTGGATATGTCA
TCTATCGTCATGCCACATCATTCATGCGTTGTGAAAAGGAAAACTACCGT
GATCACTTTTTGGATCTTTCGTAGATAATGTCAAAGTTATGGATAAGAAA
AGTCTAAGTATTTCAAATTTGTATCGCTACTAGTAAGTAACCAGTTTACG
TCTGGTTTAAGTGGCAACCGCCTTAGATGTCTGCGAAAAGTTTTAGGTTC
GACTAAAGTGatcagatgaaaaattggtgaTCAAAAGTTTCGTTTAgtta
aattaaagaaaatgttCAGTTTGGAGTCTTCTACCAAAGAGCATCACCTT
CTTGAAGTTGACAAAAGATTACGATTAAAGTTCTCGATGCTCAATATGAG
GCTCAATATGTTAGATTGGTACTCAAAATGAAGACAAAATAGAGTTGACT
CAATCAATCACTTTTTAAGAAGTCGATATATACTATGACAGTTTACACAT
TGTGATTTGCTTTTCAGGTCTCCCTTATGTCAATATTAAAATAGCGTTAC
TTAAGAGATACATTTGAATCACTCTTCATACATATCCGTGACTTTCTCTT
GAACTACGTTACAATTGACGATAGAAAGGATATTTTTACATGCTTCTGCG
ATTTGTTATTTTATAAAGAGAAGTTCAGTCAGTTTTTCATTGACCTAACT
AAACTTAGTAGGTCAATTGAATTTTGCTCACACTTTGATCACTTCATCAT
GAATAAGGATGACATAGTAAATGTTTTTGGAGTCAGAGAGTTATTTCTAG
ATCATGTTTAAACCTAAAGTAGTTTTGTGAAAGTCATTTAGCGTGAGAGA
TATTTATCTAATTACAGGGAAAGATTGGCGACGAATACTTTGAGACGGAT
TTTCTATCAAGATATATAGCATGTGACAGGTTTAGACTATAGCTTACCGA
TCAATTTGTTTAATAACTTATAGCCTATGGTACCAAGTTATCATGTTCAA
CAGTCGTCATCCAAGCtacaatcagggtcataatatattggcacttttgg
ctaatttacaatttttcgaaaattgaagttcgagcgagaatgtcaatttt
taggccttcaacttgatttcatcaagtatttcgatctgggagggatttat
gggtttctaggctatatttcaagccctactagaccatttttcaacttttg
gatcctcagatcctaaggtcttaaatctagcgttaaaactcagagttaaa
actctacccttcgaacctactttagagcacttacaaatcgattgtggttt
caaaacaccccggtgaatttcctttttgtgccaaatattttgtccctgat
tgtagtcTATATTATCCTTTATTAGAAAGTGAGACATTTCATTAATCATT
ATGAATAAAAGGTATCACAAAGGACATCGGAAGGATGCTTATTTTCCGTT
CATAAAGCAGTGATATGTCTTAGCCAGTTGTTTAGAAAAAGTCTTTTTAA
GTACAGATTCGGATATTAGAACCGTTTGACTATACTTCAGAAGTTGTATT
GATTTATTTAATAAGAGAAAGAGGGGTCTCTGTATTTTAATAACTCGATG
GATCCTGTATGATGTATTAACTTCAGTaacttgttgtttttttattttta
tacgtCTAGCCAACTGTGACTGAATAATAGAACAGGGTATGATCAATAAG
GGGCTGTTAATTGATTACTCGATGATAGAATAGGACAACgagaatttgaa
tatttttttgcatAACATATTCTCATTTAAAAGGAAATCTACTTTCAAGC
ATTGTTGGTTGGTACTGGTATCTCTTGTATGATTTTgggtttgatatttt
tgaattgaaaattggTTAGTTTTGGCAAGGACGGTTATTTGAAAAGGCCG
ATTTTATTGATTTCTCCATCATATTATACCGAATGGGATTTGAATGAATG
ATGTTTAAACAATTGCTGGTTTACCATGTGCTGGCTCTTATTATCTCCAC
AAGATGTAAGTAAAGAGTTCTTTCCCCTTGTTGTGACATTTCTTGTGCTA
AATATTTTAATTGGGTTTGCGGTCTTGTAATTATACTTAAAGGGTAATAC
TAGATTTTTGATCGGCTTATTATTCGTAGCAACTAACTTTTAGTGGTTTT
TTAGTAATTCCATTAACAATGATTTGATGATTTGAgctcatgtttttttt
aaattttatatttgGTTTGATTCTAAAAATTCTTGTCAACTTAAATTTAG
CTCAAATTTGAAAACCAATCAATAATAAAAAGGCTTTTGTACAATTTGTT
TACTTCTTATAAAAGAGCCTTGACGTTTCGAGTTTGAATTTAGCTATAGA
TGCAATtgactctctataattcgatcttcacagggtcaaaaactttcttc
gaactagagaaagattcgaattacaaagagtAATTTATAAAGCCACTTTC
CAGCTTAGGGgatcaatattttagttcgaattacaaaaaaattcgaatAT
TAAAGGTTCGAATgagagagagagttgactgaaGGTCCTAAAATGTATAT
AACAAGTCAAATACCACAGAAAAGATGAGCTTTAGGTATAAACTATATCT
CTTCGTACAACAGTCAATAAACACTGTTTCAAACAGCTACTGATCATGTC
TGAAAGAACGTGTGTCAGGtaaattgaaatttgagaaatgccttaaaagt
aaaaatgacctcctccTACAGTTTTAAGTAAAGGTATCCAACGCAACAGA
TTAAGTCATTCATGATATATCTCTTAAGATGTatgctacatgtttttttt
ataagcattgcacttgtaagcatatccaggctcagatatggggaaaaatt
aagcatatggcaagcattacttgagcctacgaaaaatgtttttttcctga
ttttgttttttttttggctggaattttacggattttcagtatttccacgt
gaattttgttttggatataagcatccctcaagcattttttcagcctttcg
acctaagcatctctaagcctgttttcgtatttttttatgcttataaaaaa
gaacatgtAGCTTTTAAGGTCTCCTAACCTGAGAaaacttacacgttttt
tttataagatcaagCTATATAAGAATGTAAGGCTTCGATGCCCAAAATGT
TAACTACAAGTTAAAAACACTTTAAGGCTTTATTGACTTTCAAACACCCA
ATTTTTTAGgaaatgcacaaaaatacttacgaaatttttaaattaaaaac
aattcaacaacattttaggcttgaaattcaaaaagttaagaacatgcgAA
GGCAtcattttggatgctcttataaaaacgtaTATAGCTCAAGTCATGGA
CAGTTATCCTCGTAATTAAAAATTTCTCTAGTTGTAACAGGAGCTCAAAA
GTTCTCTAAGATTTCTTGTTCCTTATTTATCTTATTGAGGGGAGTCAAGG
AAAAAgatcttacaaagtaaatattttgtatatCACACTCAATCAACCCC
TTTTCAGTTGATCTATATGACGGTAAATAGagattattttgatatttgag
ATTTCTGCGAACACCAATAGTATACCCCTTTTTAACGCGTCTCTTTATCA
CCCCTTAGGCTGAAATGATTTGTCTTTTTAACCTATTCATGACAATTTTA
GAGAACCAAAACTTTGACAGTTTTCAAAATCTACTTTAAGCAAGACTCGT
TACTAGTATTTTGGTTGACTATACAAAAAGAGAAATAGCTCAGATTTTGA
AATGAGCCCTTAGGTCTTTCTTACAAAACATTCCCTTAACTATCACAGCG
TTGATGAAACCTGgtccaaaagaaattttctcaaGCAAGCATTTTTATTC
AAGATTTTGTGATCCCTAGGTGTGTACAGCACTACTTCCCTTAACGACGT
CAAAATCGGCTTTTTGTTAAATACATAGAGCGCTTGATGATTTAATCGTA
AAACAAACTTAAATAAGGAAAGCTTTATTAATCTTCTTACCATAGACTTG
TTAATGCTTTTTAATGAGAGAGTGTTAATTTCAGCACTTTGTTTGATGAT
GCCTCTAGCTGATGActtcattgagtttcaagctgaaggctagaggtcaa
tcttcaacctttcccaAGCAAGCAAAagtttaaacgttttttatgagaac
atccaacattttttaagccttcggatgttcttaacattttgagatttaag
cctaaaaatgttctgagcatgttcttattttgaccattttcctaagaaat
agagCGTtcttgagtccacaaagccttaaaatgttcttaacttgttctta
acattttggccggccagcgaagccttatgttcttatatagtttgttctta
taaaaaaacgtgtactataCTGAAAGTAACTATTTAGATTTACGCCGCTT
ATCGGATGACCGAAATGAAAcaactttctttgttttcgcgtTTGGCGTTT
TTCGAATTCTGGCGGTACTTCTGGCGGTACTTCTGGCGGTTATTCTGGCG
GTTATTCTGGCGGTAATTCTGGCGGTACTAAGTTGTTTCAAATCCTACGT
AGACGATTGGACTTAAGCCTTCAGCCATGCCTCAAAATAGCTCGCATGTT
TGTCACTAGTCTTATTGTTTGAATTAGTGGCAAACAAACACCCGGTCTTT
TTTAGGTGCTTccatataaaacattacgtcatgaatatcatgaatatagg
TTCACATGATGTAACATTCAAAATCTCTTAAAGGGCTTGACTTCATCTTG
GATCTTAGAGAGTAAAATTGGTTTTACGTCACTCCCATTTCCTCTCGTAA
TCACTAGCCTACTGGATAACTGTCTTTATCATTGAATTGAAGTCAACAGT
CTATTTATAGcgattttttcaggaatttacaaaattatttcaataaaTGT
TTCGCTGTATGCTTTAGGAAATGAGAAAATCCTCTTGTCAACTACACAAG
CTGCGCTGTTATGAAAGTATTTGACAAATCTGTAGGCATAAACCAATCGT
TATTTTCTCGTTCATTGATAGCGAACAAAGACGCCATTGAGAAAATAAGA
GATGTGTCCACTTTTCTAGTGTCCTAAAATATGGAAATTTAATACcccca
cttttttcattttttggaagGAAGGAAGTACCTACTAAAAAATCTAAACA
GTTCCCCCTCTCTGTGTTATCTGGCACCTGatgtgaaaaactttttccga
cCTGAATCTGAACATCGGGGGGGGGGGAGATTTCAAACATCAATACCTTT
TAGCCTTAGAAGAAGAATTTAGCCTGAACGTGCAACGAATTTTGCAGAAA
AGGtctgaatgtttttttttgggtgATATTCTCCTCATAACAGCTCCTGA
CCATCGCGCGGTGGTTTATTGTCACTTTATGCAACAAAGCCTGATGAATC
GAGTCAAGAATTTCCTACTCCCCTCCTGACTATCCCTCCTTTAAGCTTAA
GCATGGgtggccgccaatacgccatcacAATCAGAGAATACTTTTAACTT
TACGAGCATCATAATccttaacaaaaaaatcacttatTAGATGGAAATAT
AAGCTCAGTTACTAAAAGATTATCACCTATTTACATCAGACAGTCAGggc
tataataaaacaaatagcTCGATAATCCTTTCGAAAGGATATTAAGATTA
GATATGTAAAATGGGAAGTCGTTTTGATTAAGAATGCCAAAttcgaattt
ctattatttaCTTCTGTTTGAAAACTGTCCCCCTCCCCCTTAAATGTACA
TGACTAGCCAGGTTAAGTGTCAATAGATGACATACTGTGATCTGATAGAG
GGCGGGTGAGCGTCAGGCGGGCGTAATGTTTGGTAAGTTGGGACGTCGTT
CCTTAATCAAGGCTCATAACTACCGTCTCCTTCACGCCACATGATTTCTT
CGCAGGCTAAAAGAAAggtattgaattgaattgaattgaatatattttcg
ctgcaacgcagcaggataaccccttactctaatacaatggggaaactaga
agaaactgaaaaattgttacaaaactaaagaaaaaaaaattgaataaacg
attatcgtaatattaataataacatcaaaatttGTCTACCGGGACCTGAT
CCAAATGTACCAATACGAAGAAATTGGTCTACCGTGGTCAAAGTGAAACT
AATACTGTACttctatatttgaaaaaaaattgaaagctaTACACTCCTCT
TGGGGTTGGttcaaaattttaacatctgatcaaaaagtgagcaaagccca
aataatttctcaacgcaatttcaagtaagaaacaatagAGAGAAACAAAA
GTCTTCCAGGCCGGGATTTTTTATACGGTCTTTGACGTGAACGATCCTGG
ACTGTAAAACGTTTTTGAGTTACTATTTCAatacttttcaaatattttac
tatttatttttagatttgGTGGAATGTGTAATCTCATCAGAAGGTATACC
GTCACTTACTTTTTCACTGATCTCTATTTTCATTCCCTGGATCAAGCTCT
TCCCTTTGGAGAAGATCTTAANCTTACTTTTTCACTGATCTCTATTTTCA
TTCCCTGGATCAAGCTCTTCCCTATGGAGAAGATcttaattttggcaaat
ataACCTAAGTTAGCGGCAGTAGAGTtagtctgaattgcagacctctaca
aaaccccaggtagtatatcTATAGGGAGCAAGAATCCGTTAgaggatgcc
agcagcctacagTAGAATTTGACGTACTTCCGACACTGTTTAATCCACCC
AGGTCTTCGCCTAAGTTTATCAATCTTTCCCGTATCATTCAGATATTAAT
TGTTATCATTAACCTTTTACCTTATCCAATCAGAATGCAGCAAGATTTTC
ACCGGTCAAGGTGGTGTCATCTTAACACCGGACTACCCGAGCGAATATCC
GGACGAACTTGCTTGTTCTTGGGCCATCAAGGTTCCGGCAGATAAACGAA
TCAAGATCTTTTTCGAGGATTTTCAATTAGAAAAGGCTGCTTCATGTTTT
GATCaacttgttctaagagatggcGTCGATGGACCTTTCTTAGGTGAGTT
AAACGTTTTTCTTATTAGAACATCCGAACTTTTGGAgctttcaaatgttc
ttaacttttagagttttaggcctaaaaatgttcttagcttgttcctAATT
TTACACGactttgtgagtattttttttttttaataagttatTTTaaagtc
cataaagccttaaaatgttcttgatatTTCAATCATCGAATCATTATGTT
CTTCTAtagtttgttcctataaaaagttGTGTGTCTTCATTTGCTGCAGT
TCTTAAAATTTCTATAAAGGTGATGGTTTTTTTTGATAGCTAtagatttc
tttttcaataattaaGCATGGTGTTTTCAAAAACgcatttatttctcaaa
ttgatgccattctttttttgacatttttgtagGAGAATTTTGCGGCACAG
ATGCCAAAGGAATGACTGTGACGTCATCAGCAAATACTCTCATGGTGCAA
TTTGTATCAGATGGTAGCGTCGGTGATCGCGGTgtcaaaattgtttggga
gcAAATCCCCAAAATCACTATCACAGATATTAATAGTAAGTCTATCATCC
TTCGATTTACTATTGACTCTCTCCAACCTgttcccgtgtatcccaggctt
tatttgcGTTACTTATGAACGCCAGAGCTATTATCTggtgctatcagtaa
gcatcaaaaagctgataatacgcagggaacaaGGTTGGACTCTCTCTAAC
CCGATattcaagggaccaaaaattttcttcgaattatagaacAATTAGAG
CTACGGAAAGTATCTTGGATAACTTCCCACCTGAGGGGACAAATGTTTTA
GTTCGCATTAtataaagattcgaatagtagtAACTCGGATTAAGGAAAAT
TGACTGTATTTTTATTTGAGTAGCTTTCCTACAATAATCCTTCTTGTATT
ACCGTCATTCTTTCCCGATCCCTAACTTTTTTCATTGCTTCCATAAGCGT
CAAAGTCTGTCTTACAGCTTAATCCAACAGTTGTAACAAGGATAAATTTG
AGTTTCGTTGGCTTAAAGCAATGTTCTTTGTAATTCATTTCTACAAGTTG
ATAAAGAAGACATTATTCTTCATTAAGTTTGATCCAAAAGACTGAAAGAT
TAAAAAAGATAGGCACTAGGTTTCTTTTGCTTTCGATTGGCTAGACTGTA
ATCCCAAATGTCTTATCTCCTTTAGAAGTATCATTCCAAGACCCATGGCT
TGGTAAAGTATCGCCAGCCGGTGTAAAGATAATCGAGAGTGGATTATCAA
GTATGAGTATATGGATTGTTGATCAGTTTAATGATGTCCATTATTATGAT
GGTTTCTCCTGGGACGTTCTTAAAGGTAAAAAACcattttctcgtttttt
ttttcacagagAAGAGCCTCATGGGTcatgagaaaaaaacattaacgTCA
AAGAGTACTAAAGATTAAGAAAAATCATAATGCCTTAAAGTTGTGACTAT
TTTTAATGTCCTTGGCCCGACTTGGCTTCTAAGCTGATTTTAAGAGTCCT
TCATTATTGTAATTGTGAATTGCGTTCCAAACAAACGCATTTCCCTATTt
cgacgtcaatgcaatgatttCTTTGAATCTTCTTCAAGCaaagcttcttt
taattgacaACTTTCTGCCCGCTTTTTGCCTACTTCTTCAAGAAGTTTTA
CAGAAAGTCAGCCTGCTAGACTAGaactaaaattcttttttctcctttgG
TCTGTAGGTAAAGCAACAATTTCTTTGAATCTtcttcaagcaaagatttt
aactgccaactttcaacccactttttttttgtagGTAAAGCCAAAACACT
GAGCGTTGGCGAGACTGN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004647XLOC_004647Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008261-exon-sc0000084-1491911889:128827..129004TCONS_00008261-exon-sc0000084-1491911889:128827..129004Clytia hemisphaericaexon
TCONS_00008261-exon-sc0000084-1510915933:128827..129004TCONS_00008261-exon-sc0000084-1510915933:128827..129004Clytia hemisphaericaexon
TCONS_00008261-exon-sc0000084-1575043694:128827..129004TCONS_00008261-exon-sc0000084-1575043694:128827..129004Clytia hemisphaericaexon
TCONS_00008261-exon-sc0000084-1491911889:135747..135903TCONS_00008261-exon-sc0000084-1491911889:135747..135903Clytia hemisphaericaexon
TCONS_00008261-exon-sc0000084-1510915933:135747..135903TCONS_00008261-exon-sc0000084-1510915933:135747..135903Clytia hemisphaericaexon
TCONS_00008261-exon-sc0000084-1575043694:135747..135903TCONS_00008261-exon-sc0000084-1575043694:135747..135903Clytia hemisphaericaexon
TCONS_00008261-exon-sc0000084-1491911889:145590..145619TCONS_00008261-exon-sc0000084-1491911889:145590..145619Clytia hemisphaericaexon
TCONS_00008261-exon-sc0000084-1510915933:145590..145619TCONS_00008261-exon-sc0000084-1510915933:145590..145619Clytia hemisphaericaexon
TCONS_00008261-exon-sc0000084-1575043694:145590..145619TCONS_00008261-exon-sc0000084-1575043694:145590..145619Clytia hemisphaericaexon
TCONS_00008261-exon-sc0000084-1491911889:146010..146219TCONS_00008261-exon-sc0000084-1491911889:146010..146219Clytia hemisphaericaexon
TCONS_00008261-exon-sc0000084-1510915933:146010..146219TCONS_00008261-exon-sc0000084-1510915933:146010..146219Clytia hemisphaericaexon
TCONS_00008261-exon-sc0000084-1575043694:146010..146219TCONS_00008261-exon-sc0000084-1575043694:146010..146219Clytia hemisphaericaexon
TCONS_00008261-exon-sc0000084-1491911889:146609..146761TCONS_00008261-exon-sc0000084-1491911889:146609..146761Clytia hemisphaericaexon
TCONS_00008261-exon-sc0000084-1510915933:146609..146761TCONS_00008261-exon-sc0000084-1510915933:146609..146761Clytia hemisphaericaexon
TCONS_00008261-exon-sc0000084-1575043694:146609..146761TCONS_00008261-exon-sc0000084-1575043694:146609..146761Clytia hemisphaericaexon
TCONS_00008261-exon-sc0000084-1491911889:147402..147551TCONS_00008261-exon-sc0000084-1491911889:147402..147551Clytia hemisphaericaexon
TCONS_00008261-exon-sc0000084-1510915933:147402..147551TCONS_00008261-exon-sc0000084-1510915933:147402..147551Clytia hemisphaericaexon
TCONS_00008261-exon-sc0000084-1575043694:147402..147551TCONS_00008261-exon-sc0000084-1575043694:147402..147551Clytia hemisphaericaexon
TCONS_00008261-exon-sc0000084-1491911889:148011..148044TCONS_00008261-exon-sc0000084-1491911889:148011..148044Clytia hemisphaericaexon
TCONS_00008261-exon-sc0000084-1510915933:148011..148044TCONS_00008261-exon-sc0000084-1510915933:148011..148044Clytia hemisphaericaexon
TCONS_00008261-exon-sc0000084-1575043694:148011..148044TCONS_00008261-exon-sc0000084-1575043694:148011..148044Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000084supercontigsc0000084:128827..148044 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.188309	0	0	0.0146153	1.9524	1.94662	0	1.17142	0	0	0	0.41142	1.01485	0.487852	0.35722	0.710378	1.69376	0.230326	0.515304	7.53209e-07	0	0	0	0.107523	1.08184	2.73682	0	0.222482	0.218458	0
Blast
[Close]
BLAST of TCONS_00008261 vs. Swiss-Prot (Human)
Match: AGRG6 (Adhesion G-protein coupled receptor G6 OS=Homo sapiens GN=ADGRG6 PE=1 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 2.826e-17
Identity = 39/104 (37.50%), Postives = 59/104 (56.73%), Query Frame = 2 
Query:  368 CSKIFTGQGGVILTPDYPSEYPDELACSWAIKVPADKRIKIFFEDFQLEKAASC-FDQLVLRDGVDGPFLGEFCGTDAKGMTVTSSANTLMVQFVSDGSVGDRG 676
            C  + +   G   +P YP++YP+  AC W ++ P    I+I F DF +E+A +C +D L L +G       +FCG  AKG++  SSAN + V F SD S+  +G
Sbjct:   41 CRVVLSNPSGTFTSPCYPNDYPNSQACMWTLRAPTGYIIQITFNDFDIEEAPNCIYDSLSLDNGESQT---KFCGATAKGLSFNSSANEMHVSFSSDFSIQKKG 141
The following BLAST results are available for this feature:
BLAST of TCONS_00008261 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AGRG62.826e-1737.50Adhesion G-protein coupled receptor G6 OS=Homo sap... [more]
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