TCONS_00008037 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008037
Unique NameTCONS_00008037
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2817

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008037 ID=TCONS_00008037|Name=TCONS_00008037|organism=Clytia hemisphaerica|type=transcript|length=2817bp
ACACAAGCCAGTTGAAAGGAGCTGGAAGTTATTTCCGTTTGAGGAGTGGA
TTGCAGGGATAAGTGTTTCCGGAACGGAAACTTTGCTTAATCTGTATTAG
ATCTAGCTTTTGGTCTATTTGAATGAAGAGTTAATGATAGCACAGGAGCA
TCTTTACAATCATCGATAGGTGCtagaaaagatttgtaaacTTTTAAGTG
AACATCCGAGAATTCACATTGAAAATTCTACCTTTCAAGATTTGAGAGGG
TAGAATTTTCAtaaccaaaaaaagaaaaatagaagaaaaaattggAAGAT
TGAATATCTAGACTATAATACAACATGGAAATCAACAATCTAGTGAAACT
GCAACACCCACGGAGTCACCATGTGGCTCATCTCTACCAACGAAGCAGCG
TGGCTCAATATCCGTCACCTTATGACTACATCAAAGAACCATTGCATTGT
TGTTCAATCTTGATCTGTAAATGGCGCGAAATCACttccaatttttataa
aaacaatcacGTTCGACGACATATTTTAATGCAGAATCATCTACTTGAGC
TACAAGGTTTGCGGATGAAATGTAGCACTTTTTTAGATCTGCCTGAATAT
GATCATTATAAAACAGATGAGACTGTTTACGTTCATTTAAGAGCAATTGA
ACATAACGAATCTTTTGTGGTCGAGATTGTTTCAATAACAAATGACCAAA
CTGTAGCAATGCCTCTTTATGATATTCACGCCTCTGCGGAAGAGCTTTTC
AAGCCACGATCCAGTCAGTATGGGACTGGAATCCCTTGTTGTGGTATAAT
GGAGTGTAAGAAACGAGATATGAAATTTGGACGTGAATTCATAACAACTG
CCGGTGGATTCCAATTCAAATTACATCCATTGTTTGATTTGCCTGCTGAA
GTCGCCGAAGCACCATCGCAAGATCGTGTCTGTCTGCATTTGAAGATTTT
GCAACAGGAAATTAAAGCTTTGTCAGCTTTCGTATGTCCTGTTGGATTTT
GTCATAAGACTAAATATTGTTCTTGTGATGCGTGTAAACACATGGTTTCG
ACGTACCATTTTGGAAGGAAAGTTTTGTCAACTGATGTGGTGATACCAAA
GACATCTCAACTCTATTTCATCTCAAAAGGTTTGAATCTATCATGTGAAA
GTAAGAATGCTATATTCATCATCACATGTCAACGATGCAAAGATTACCAA
TATGTCGGTCAAACCATCGGATCAAGCGTACGTGAGCGGATCAGAGCGTT
GTGTTATGATTACCGGAACGATAAACGAAGCCGGTTATGTAATCATTTCC
GGCAAAAAGATCATAACGGTCTGACAGATTGGGAGATAACGGTTATTGAT
CAGTTACCGCATGTTAAAGACAATCTGAATGACCTTGAACAACTATGGAT
TGATAGATTGGAAACATTGAATAAACAATATGGCGGATTGAATATGAACC
CAGCTGCTGGACAGAAGACTTTATTGTTCATTTCGGATAATAAGTTGATT
AATTGTTCAGCTGCACTCAAGTTTCATGAGATTACTccgaaaagatttcc
agGCAAATCAATCGACGAAATTGCAAAAATGGCTCCGATAATAATCGAAA
GAGAAAAACCAAAACGTATAATCCTACATGTGGGTAGCTTAGACGTCGCA
ACTGAAAAACCATGTAAACAAATTGCCAAAGAGATTTTACAACTGGTTTA
CAAGCTACAAACAAATTCTGGTTATGTTGTTTGGATTTCTGGTTTATTAC
CAAGAGATGgtttaaagaataaaaaagtgatGGCAATTAATAAGATTCTA
CATCATTATTGCCAAGAAAAGCCACAAATGAGATTCATAGACCATTGCAA
TATTGATCCCAGTGTTCATTTCAAGGTTGATCGACACTTGAATGCGTATG
GGATTCAAACTTTTGCCAGCAATGTAGATGGAGTGTTTCAGAAGAAGTAT
TCGGATGAGAGAAAAGAGAGATCGATTGATTTGTATAAAAAGGAACTAAT
ACATGGATAGAGACAACTTTTTGTATCCAGGTCTCTGgtgatttttcata
aatttttgcaGCGAAATGAGCGAACAATTATACAAATCATCCAAAGATGT
TGTTCTGTAAGTCTTAATGGAAAGCTTGTTAGTATGTAGTTGAACTCTAA
AGAAAATGGGAATGAAAAAAAGACATTGGTAGACTCTCTCTTGGAAGAGT
CATTTTGAATATGCGAATTTGATCGACACTTGAATGCTTATGGGATTCAA
ACTTTTGCCAGCAATGTGGATGGAGTGTTTCAGAAGAAGTATTCGGATGA
AAGGAAAGAGAGATTGATTGATTATATAAAATGGAGCTATTACATGGATA
GAAGCAACTTTCGGATTTGCCTTGAATTTGGTAGTGTGATTTTTACCATG
TGATAATAAGGACTCGTTATTTGAAATGTGGATCATCAAGTCATCAAAAG
ATACTGCTCAGCAGATTTAACCCTAAagacaatgaaatgaaaagttttga
aagggGAGCAAATTGTTAGTGGACCGAAGGTCTTAAAAGTTGGTCAAAAG
GCGATACGGAGCGTCAAAGGGGAGGGGGGGGGCAGTTTTGACCTACACCG
GACCCACTCCATACTTTAAGTTGAAAgactatttttgttatttttttaat
atttcgtaAAATGTAGGTAGACACAACATGAACGTGTGCCGAAATTGTAt
ttctaaatgtttttaaagaatTGTTACTTGTGGTTGATTTAAACCAGTTT
AAACTTGTATATCAGTGTATTAGATTTTGTATTAAGACAGGTTAAAAGGA
AAatggaagaagaaaag
Run BLAST on NCBI

protein sequence of TCONS_00008037-protein

>TCONS_00008037-protein ID=TCONS_00008037-protein|Name=TCONS_00008037-protein|organism=Clytia hemisphaerica|type=polypeptide|length=561bp
MEINNLVKLQHPRSHHVAHLYQRSSVAQYPSPYDYIKEPLHCCSILICKW
REITSNFYKNNHVRRHILMQNHLLELQGLRMKCSTFLDLPEYDHYKTDET
VYVHLRAIEHNESFVVEIVSITNDQTVAMPLYDIHASAEELFKPRSSQYG
TGIPCCGIMECKKRDMKFGREFITTAGGFQFKLHPLFDLPAEVAEAPSQD
RVCLHLKILQQEIKALSAFVCPVGFCHKTKYCSCDACKHMVSTYHFGRKV
LSTDVVIPKTSQLYFISKGLNLSCESKNAIFIITCQRCKDYQYVGQTIGS
SVRERIRALCYDYRNDKRSRLCNHFRQKDHNGLTDWEITVIDQLPHVKDN
LNDLEQLWIDRLETLNKQYGGLNMNPAAGQKTLLFISDNKLINCSAALKF
HEITPKRFPGKSIDEIAKMAPIIIEREKPKRIILHVGSLDVATEKPCKQI
AKEILQLVYKLQTNSGYVVWISGLLPRDGLKNKKVMAINKILHHYCQEKP
QMRFIDHCNIDPSVHFKVDRHLNAYGIQTFASNVDGVFQKKYSDERKERS
IDLYKKELIHG
Run BLAST on NCBI

transcript from alignment at sc0000081:379280..383086-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008037 ID=TCONS_00008037|Name=TCONS_00008037|organism=Clytia hemisphaerica|type=transcript|length=3807bp|location=Sequence derived from alignment at sc0000081:379280..383086- (Clytia hemisphaerica)
ACACAAGCCAGTTGAAAGGAGCTGGAAGTTATTTCCGTTTGAGGAGTGGA TTGCAGGGATAAGTGTTTCCGGAACGGAAACTTTGCTTAATCTGTATTAG ATCTAGCTTTTGGTCTATTTGAATGAAGAGTTAATGATAGCACAGGAGCA TCTTTACAATCATCGATAGGTGCTAGAAAAGATTTGTAAACTTTTAAGTG AACATCCGAGAATTCACATTGAAAATTCTACCTTTCAAGATTTGAGAGGG TAGAATTTTCATAACCAAAAAAAGAAAAATAGAAGAAAAAATTGGAAGAT TGAATATCTAGACTATAATACAACATGGAAATCAACAATCTAGTGAAACT GCAACACCCACGGAGTCACCATGTGGCTCATCTCTACCAACGAAGCAGCG TGGCTCAATATCCGTCACCTTATGACTACATCAAAGAACCATTGCATTGT TGTTCAATCTTGATCTGTAAATGGCGCGAAATCACTTCCAATTTTTATAA AAACAATCACGTTCGACGACATATTTTAATGCAGAATCATCTACTTGAGC TACAAGGTTTGCGGATGAAATGTAGCACTTTTTTAGATCTGCCTGAATAT GATCATTATAAAACAGATGAGACTGTTTACGTTCATTTAAGAGCAATTGA ACATAACGAATCTTTTGTGGTCGAGATTGTTTCAATAACAAATGACCAAA CTGTAGCAATGCCTCTTTATGATATTCACGCCTCTGCGGAAGAGCTTTTC AAGCCACGATCCAGTCAGTATGGGACTGGAATCCCTTGTTGTGGTATAAT GGAGTGTAAGAAACGAGATATGAAATTTGGACGTGAATTCATAACAACTG CCGGTGGATTCCAATTCAAATTACATCCATTGTTTGATTTGCCTGCTGAA GTCGCCGAAGCACCATCGCAAGATCGTGTCTGTCTGCATTTGAAGATTTT GCAACAGGAAATTAAAGCTTTGTCAGCTTTCGTATGTCCTGTTGGATTTT GTCATAAGACTAAATATTGTTCTTGTGATGCGTGTAAACACATGGTTTCG ACGTACCATTTTGGAAGGAAAGTTTTGTCAACTGATGTGGTGATACCAAA GACATCTCAACTCTATTTCATCTCAAAAGGTATGTATTATCAAAGTTTGA CTTAGTCTAAGACAAATCACTATCTAAGAAATACTCTAAGCCCAGTTCTT CGAAACTCTCCCGCCGATTTTTTTCCGTATACCGCCATAACGCCATACCA CCATATTTTCCCGCCTTTACCATCACTGTAACGGACGATAACATCGTCTA TATCAAAGTTTGAAAGTGGGTGACAAAATAGGAGGAAATTTCTCCAGTGC TAAGAATAGTTAAAATATGAACAAAACTCAGACCCAGATGAGAAAGGTTC ACGTCCTGTGTTGAAAATAGTCTGTCCCAGAAGTTTGCTCAACTCAAGAC ATAAACAAAGAATGAATGCGGTTGAGAAGAAAACTAGCAACCCTACATAA AGACAATGTAAGAAAACGCTTGACCAATAGGAGTTTTTCAATTTGTTAAA ATTATGTGATTTCCGCCATCACGGAAGCAAAGGTTCGATTTGCATATTCG AACGTTTGCTTCCAGAATGGCAGAAATAAGATGACTTATAACAAAACATG CTAAACTTCTATGCCAAACAAATTTCTTATCTTTCATTTCAGGTTTGAAT CTATCATGTGAAAGTAAGAATGCTATATTCATCATCACATGTCAACGATG CAAAGATTACCAATATGTCGGTCAAACCATCGGATCAAGCGTACGTGAGC GGATCAGAGCGTTGTGTTATGATTACCGGAACGATAAACGAAGCCGGTTA TGTAATCATTTCCGGCAAAAAGATCATAACGGTCTGACAGATTGGGAGAT AACGGTTATTGATCAGTTACCGCATGTTAAAGACAATCTGAATGACCTTG AACAACTATGGATTGATAGATTGGAAACATTGAATAAACAATATGGCGGA TTGAATATGAACCCAGCTGCTGGACAGAAGACTTTATTGTTCATTTCGGA TAATAAGTTGATTAATTGTTCAGCTGCACTCAAGTTTCATGAGATTACTC CGAAAAGATTTCCAGGTAGGTGACCAAATCTCTTATAAAGGTTTTGGACA AGTCTGATTTCGTTTTTCTTCACACGCTTCTACTTCTTTGAAAGTTAACT CCTGATTGGTGGAATAATGGGTCCACGTGTGTATAGACTACAGAATGAAA ACAAAAGAATGTGGGGAAAACTCGTGCACAATTCCTTAATTTGTTTTTTA TGGTTGTAATGAAAGTTCCATTTACCAAAGATTGTAGCACGTTTATAAGT AAAGTGCAAGTAAAGTGCAAGTAAAGTGCAAAATATTATAATTGACATTT TCAATTGACACCAACCACGTTGTACATTTAAAAGGCTCTCCATAAAGTCT AGGTCCTGAATTTAGCTCACTGTTTATGAATTTGGTTAACATAAGTTTCG AATGTAAAAGATTAAAAAGTATAACCAATGTTTCCTTTTAAGGCAAATCA ATCGACGAAATTGCAAAAATGGCTCCGATAATAATCGAAAGAGAAAAACC AAAACGTATAATCCTACATGTGGGTAGCTTAGACGTCGCAACTGAAAAAC CATGTAAACAAATTGCCAAAGAGATTTTACAACTGGTTTACAAGCTACAA ACAAATTCTGGTTATGTTGTTTGGATTTCTGGTTTATTACCAAGAGATGG TTTAAAGAATAAAAAAGTGATGGCAATTAATAAGATTCTACATCATTATT GCCAAGAAAAGCCACAAATGAGATTCATAGACCATTGCAATATTGATCCC AGTGTTCATTTCAAGGTTGATCGACACTTGAATGCGTATGGGATTCAAAC TTTTGCCAGCAATGTAGATGGAGTGTTTCAGAAGAAGTATTCGGATGAGA GAAAAGAGAGATCGATTGATTTGTATAAAAAGGAACTAATACATGGATAG AGACAACTTTTTGTATCCAGGTCTCTGGTGATTTTTCATAAATTTTTGCA GCGAAATGAGCGAACAATTATACAAATCATCCAAAGATGTTGTTCTGTAA GTCTTAATGGAAAGCTTGTTAGTATGTAGTTGAACTCTAAAGAAAATGGG AATGAAAAAAAGACATTGGTAGACTCTCTCTTGGAAGAGTCATTTTGAAT ATGCGAATTTGATCGACACTTGAATGCTTATGGGATTCAAACTTTTGCCA GCAATGTGGATGGAGTGTTTCAGAAGAAGTATTCGGATGAAAGGAAAGAG AGATTGATTGATTATATAAAATGGAGCTATTACATGGATAGAAGCAACTT TCGGATTTGCCTTGAATTTGGTAGTGTGATTTTTACCATGTGATAATAAG GACTCGTTATTTGAAATGTGGATCATCAAGTCATCAAAAGATACTGCTCA GCAGATTTAACCCTAAAGACAATGAAATGAAAAGTTTTGAAAGGGGAGCA AATTGTTAGTGGACCGAAGGTCTTAAAAGTTGGTCAAAAGGCGATACGGA GCGTCAAAGGGGAGGGGGGGGGCAGTTTTGACCTACACCGGACCCACTCC ATACTTTAAGTTGAAAGACTATTTTTGTTATTTTTTTAATATTTCGTAAA ATGTAGGTAGACACAACATGAACGTGTGCCGAAATTGTATTTCTAAATGT TTTTAAAGAATTGTTACTTGTGGTTGATTTAAACCAGTTTAAACTTGTAT ATCAGTGTATTAGATTTTGTATTAAGACAGGTTAAAAGGAAAATGGAAGA AGAAAAG

Coding sequence (CDS) from alignment at sc0000081:379280..383086-

>TCONS_00008037 ID=TCONS_00008037|Name=TCONS_00008037|organism=Clytia hemisphaerica|type=CDS|length=5058bp|location=Sequence derived from alignment at sc0000081:379280..383086- (Clytia hemisphaerica)
GCAAATCAATCGACGAAATTGCAAAAATGGCTCCGATAATAATCGAAAGA
GAAAAACCAAAACGTATAATCCTACATGTGGGTAGCTTAGACGTCGCAAC
TGAAAAACCATGTAAACAAATTGCCAAAGAGATTTTACAACTGGTTTACA
AGCTACAAACAAATTCTGGTTATGTTGTTTGGATTTCTGGTTTATTACCA
AGAGATGGTTTAAAGAATAAAAAAGTGATGGCAATTAATAAGATTCTACA
TCATTATTGCCAAGAAAAGCCACAAATGAGATTCATAGACCATTGCAATA
TTGATCCCAGTGTTCATTTCAAGGTTGATCGACACTTGAATGCGTATGGG
ATTCAAACTTTTGCCAGCAATGTAGATGGAGTGTTTCAGAAGAAGTATTC
GGATGAGAGAAAAGAGAGATCGATTGATTTGTATAAAAAGGAACTAATAC
ATGGATAGGTTTGAATCTATCATGTGAAAGTAAGAATGCTATATTCATCA
TCACATGTCAACGATGCAAAGATTACCAATATGTCGGTCAAACCATCGGA
TCAAGCGTACGTGAGCGGATCAGAGCGTTGTGTTATGATTACCGGAACGA
TAAACGAAGCCGGTTATGTAATCATTTCCGGCAAAAAGATCATAACGGTC
TGACAGATTGGGAGATAACGGTTATTGATCAGTTACCGCATGTTAAAGAC
AATCTGAATGACCTTGAACAACTATGGATTGATAGATTGGAAACATTGAA
TAAACAATATGGCGGATTGAATATGAACCCAGCTGCTGGACAGAAGACTT
TATTGTTCATTTCGGATAATAAGTTGATTAATTGTTCAGCTGCACTCAAG
TTTCATGAGATTACTCCGAAAAGATTTCCAGATGGAAATCAACAATCTAG
TGAAACTGCAACACCCACGGAGTCACCATGTGGCTCATCTCTACCAACGA
AGCAGCGTGGCTCAATATCCGTCACCTTATGACTACATCAAAGAACCATT
GCATTGTTGTTCAATCTTGATCTGTAAATGGCGCGAAATCACTTCCAATT
TTTATAAAAACAATCACGTTCGACGACATATTTTAATGCAGAATCATCTA
CTTGAGCTACAAGGTTTGCGGATGAAATGTAGCACTTTTTTAGATCTGCC
TGAATATGATCATTATAAAACAGATGAGACTGTTTACGTTCATTTAAGAG
CAATTGAACATAACGAATCTTTTGTGGTCGAGATTGTTTCAATAACAAAT
GACCAAACTGTAGCAATGCCTCTTTATGATATTCACGCCTCTGCGGAAGA
GCTTTTCAAGCCACGATCCAGTCAGTATGGGACTGGAATCCCTTGTTGTG
GTATAATGGAGTGTAAGAAACGAGATATGAAATTTGGACGTGAATTCATA
ACAACTGCCGGTGGATTCCAATTCAAATTACATCCATTGTTTGATTTGCC
TGCTGAAGTCGCCGAAGCACCATCGCAAGATCGTGTCTGTCTGCATTTGA
AGATTTTGCAACAGGAAATTAAAGCTTTGTCAGCTTTCGTATGTCCTGTT
GGATTTTGTCATAAGACTAAATATTGTTCTTGTGATGCGTGTAAACACAT
GGTTTCGACGTACCATTTTGGAAGGAAAGTTTTGTCAACTGATGTGGTGA
TACCAAAGACATCTCAACTCTATTTCATCTCAAAAGGCAAATCAATCGAC
GAAATTGCAAAAATGGCTCCGATAATAATCGAAAGAGAAAAACCAAAACG
TATAATCCTACATGTGGGTAGCTTAGACGTCGCAACTGAAAAACCATGTA
AACAAATTGCCAAAGAGATTTTACAACTGGTTTACAAGCTACAAACAAAT
TCTGGTTATGTTGTTTGGATTTCTGGTTTATTACCAAGAGATGGTTTAAA
GAATAAAAAAGTGATGGCAATTAATAAGATTCTACATCATTATTGCCAAG
AAAAGCCACAAATGAGATTCATAGACCATTGCAATATTGATCCCAGTGTT
CATTTCAAGGTTGATCGACACTTGAATGCGTATGGGATTCAAACTTTTGC
CAGCAATGTAGATGGAGTGTTTCAGAAGAAGTATTCGGATGAGAGAAAAG
AGAGATCGATTGATTTGTATAAAAAGGAACTAATACATGGATAGGTTTGA
ATCTATCATGTGAAAGTAAGAATGCTATATTCATCATCACATGTCAACGA
TGCAAAGATTACCAATATGTCGGTCAAACCATCGGATCAAGCGTACGTGA
GCGGATCAGAGCGTTGTGTTATGATTACCGGAACGATAAACGAAGCCGGT
TATGTAATCATTTCCGGCAAAAAGATCATAACGGTCTGACAGATTGGGAG
ATAACGGTTATTGATCAGTTACCGCATGTTAAAGACAATCTGAATGACCT
TGAACAACTATGGATTGATAGATTGGAAACATTGAATAAACAATATGGCG
GATTGAATATGAACCCAGCTGCTGGACAGAAGACTTTATTGTTCATTTCG
GATAATAAGTTGATTAATTGTTCAGCTGCACTCAAGTTTCATGAGATTAC
TCCGAAAAGATTTCCAGATGGAAATCAACAATCTAGTGAAACTGCAACAC
CCACGGAGTCACCATGTGGCTCATCTCTACCAACGAAGCAGCGTGGCTCA
ATATCCGTCACCTTATGACTACATCAAAGAACCATTGCATTGTTGTTCAA
TCTTGATCTGTAAATGGCGCGAAATCACTTCCAATTTTTATAAAAACAAT
CACGTTCGACGACATATTTTAATGCAGAATCATCTACTTGAGCTACAAGG
TTTGCGGATGAAATGTAGCACTTTTTTAGATCTGCCTGAATATGATCATT
ATAAAACAGATGAGACTGTTTACGTTCATTTAAGAGCAATTGAACATAAC
GAATCTTTTGTGGTCGAGATTGTTTCAATAACAAATGACCAAACTGTAGC
AATGCCTCTTTATGATATTCACGCCTCTGCGGAAGAGCTTTTCAAGCCAC
GATCCAGTCAGTATGGGACTGGAATCCCTTGTTGTGGTATAATGGAGTGT
AAGAAACGAGATATGAAATTTGGACGTGAATTCATAACAACTGCCGGTGG
ATTCCAATTCAAATTACATCCATTGTTTGATTTGCCTGCTGAAGTCGCCG
AAGCACCATCGCAAGATCGTGTCTGTCTGCATTTGAAGATTTTGCAACAG
GAAATTAAAGCTTTGTCAGCTTTCGTATGTCCTGTTGGATTTTGTCATAA
GACTAAATATTGTTCTTGTGATGCGTGTAAACACATGGTTTCGACGTACC
ATTTTGGAAGGAAAGTTTTGTCAACTGATGTGGTGATACCAAAGACATCT
CAACTCTATTTCATCTCAAAAGGCAAATCAATCGACGAAATTGCAAAAAT
GGCTCCGATAATAATCGAAAGAGAAAAACCAAAACGTATAATCCTACATG
TGGGTAGCTTAGACGTCGCAACTGAAAAACCATGTAAACAAATTGCCAAA
GAGATTTTACAACTGGTTTACAAGCTACAAACAAATTCTGGTTATGTTGT
TTGGATTTCTGGTTTATTACCAAGAGATGGTTTAAAGAATAAAAAAGTGA
TGGCAATTAATAAGATTCTACATCATTATTGCCAAGAAAAGCCACAAATG
AGATTCATAGACCATTGCAATATTGATCCCAGTGTTCATTTCAAGGTTGA
TCGACACTTGAATGCGTATGGGATTCAAACTTTTGCCAGCAATGTAGATG
GAGTGTTTCAGAAGAAGTATTCGGATGAGAGAAAAGAGAGATCGATTGAT
TTGTATAAAAAGGAACTAATACATGGATAGGTTTGAATCTATCATGTGAA
AGTAAGAATGCTATATTCATCATCACATGTCAACGATGCAAAGATTACCA
ATATGTCGGTCAAACCATCGGATCAAGCGTACGTGAGCGGATCAGAGCGT
TGTGTTATGATTACCGGAACGATAAACGAAGCCGGTTATGTAATCATTTC
CGGCAAAAAGATCATAACGGTCTGACAGATTGGGAGATAACGGTTATTGA
TCAGTTACCGCATGTTAAAGACAATCTGAATGACCTTGAACAACTATGGA
TTGATAGATTGGAAACATTGAATAAACAATATGGCGGATTGAATATGAAC
CCAGCTGCTGGACAGAAGACTTTATTGTTCATTTCGGATAATAAGTTGAT
TAATTGTTCAGCTGCACTCAAGTTTCATGAGATTACTCCGAAAAGATTTC
CAGATGGAAATCAACAATCTAGTGAAACTGCAACACCCACGGAGTCACCA
TGTGGCTCATCTCTACCAACGAAGCAGCGTGGCTCAATATCCGTCACCTT
ATGACTACATCAAAGAACCATTGCATTGTTGTTCAATCTTGATCTGTAAA
TGGCGCGAAATCACTTCCAATTTTTATAAAAACAATCACGTTCGACGACA
TATTTTAATGCAGAATCATCTACTTGAGCTACAAGGTTTGCGGATGAAAT
GTAGCACTTTTTTAGATCTGCCTGAATATGATCATTATAAAACAGATGAG
ACTGTTTACGTTCATTTAAGAGCAATTGAACATAACGAATCTTTTGTGGT
CGAGATTGTTTCAATAACAAATGACCAAACTGTAGCAATGCCTCTTTATG
ATATTCACGCCTCTGCGGAAGAGCTTTTCAAGCCACGATCCAGTCAGTAT
GGGACTGGAATCCCTTGTTGTGGTATAATGGAGTGTAAGAAACGAGATAT
GAAATTTGGACGTGAATTCATAACAACTGCCGGTGGATTCCAATTCAAAT
TACATCCATTGTTTGATTTGCCTGCTGAAGTCGCCGAAGCACCATCGCAA
GATCGTGTCTGTCTGCATTTGAAGATTTTGCAACAGGAAATTAAAGCTTT
GTCAGCTTTCGTATGTCCTGTTGGATTTTGTCATAAGACTAAATATTGTT
CTTGTGATGCGTGTAAACACATGGTTTCGACGTACCATTTTGGAAGGAAA
GTTTTGTCAACTGATGTGGTGATACCAAAGACATCTCAACTCTATTTCAT
CTCAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004527XLOC_004527Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008037-proteinTCONS_00008037-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008037-exon-sc0000081-1575043694:381958..383086TCONS_00008037-exon-sc0000081-1575043694:381958..383086Clytia hemisphaericaexon
TCONS_00008037-exon-sc0000081-1575043694:380972..381394TCONS_00008037-exon-sc0000081-1575043694:380972..381394Clytia hemisphaericaexon
TCONS_00008037-exon-sc0000081-1575043694:379280..380544TCONS_00008037-exon-sc0000081-1575043694:379280..380544Clytia hemisphaericaexon
TCONS_00008037-exon-sc0000081-1510915933:381958..383086TCONS_00008037-exon-sc0000081-1510915933:381958..383086Clytia hemisphaericaexon
TCONS_00008037-exon-sc0000081-1510915933:380972..381394TCONS_00008037-exon-sc0000081-1510915933:380972..381394Clytia hemisphaericaexon
TCONS_00008037-exon-sc0000081-1510915933:379280..380544TCONS_00008037-exon-sc0000081-1510915933:379280..380544Clytia hemisphaericaexon
TCONS_00008037-exon-sc0000081-1491911889:381958..383086TCONS_00008037-exon-sc0000081-1491911889:381958..383086Clytia hemisphaericaexon
TCONS_00008037-exon-sc0000081-1491911889:380972..381394TCONS_00008037-exon-sc0000081-1491911889:380972..381394Clytia hemisphaericaexon
TCONS_00008037-exon-sc0000081-1491911889:379280..380544TCONS_00008037-exon-sc0000081-1491911889:379280..380544Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000081supercontigsc0000081:379280..383086 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.018374 0.0290368 0.0174962 0 0.103337 0.0710148 0 0.0906726 3.00103 1.93835 0.0231811 0.0830692 0.184295 0.241336 4.1027 4.08505 1.19402 1.0576 0.281986 0.671119 0.988376 2.35994 0 0 0.0302381 0.0153911
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000305GIY-YIG_SF
IPR013830SGNH_hydro
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008037 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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