TCONS_00008027 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008027
Unique NameTCONS_00008027
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1057

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008027 ID=TCONS_00008027|Name=TCONS_00008027|organism=Clytia hemisphaerica|type=transcript|length=1057bp
aattgaaatttcatattaaaTCAAGGTGGgaaatacaaacaaaatgtTTA
TACGTACATTCATAATATGTTACGTAGTCTACGTTAGTTTTACGTTAGGG
GAAGAAACTATCGTTCGTACGGCTACGGGAGATTACTTAAACGGACAGGA
CCTTGATTGTGGTTTTTACGGCGCAACGGCAATTGGAAACGATACATGTT
TTTGTGGTAGTGGAAAATCATATTTCACGAACTCATCAGGTTCCTCGTCT
TGCTTTTTTGGTAGAGGACAAGAAGAATTAGGATGTACAGTTTACAATAT
GAATGATCCACGAGaccaaattcaaattttgaacatgaGTGTGGATACGC
TCATTGATCTTAATTCTGATAAAGGATTACAGTGTCAACCAACACCTGTT
GTGTTGAAGGAATGGGTAAATGAGACTTGGGTCAATATGGAAGGAAGTAA
CTTGCCTGTTGGAATTAATTCAAGAACTGTAGATCAACCTGGTGGTGGTG
CTAAAGTCACTATCAAAACACTTCATCTTTACCCTGTAGTTGATGAAGct
aaaaaagaatatttacaAGGAAAGCTGGTCAGATTTGATTTTACTGTGTG
CAACCATTCAAGCTGCCTCTTACTCAAATACCCTGGAGAAAGAACCTGGA
ATGCACCCCAGCCGCCCACTGAAGCACCGACTACAACAACAGCTGCGCCC
ACTACAACAACTGCGGTGCCTACAACCGGAAGTGGAGGAGGTGGTATTAA
CGGTACTAACAGTACTATCGCTACACCAACGAGAGAGCCGTCGACTGGGG
ACGATAATGATGACGAAGACCTTCTCATCAAAATTCTTGTTCCAGTGTGt
gtcatcattttcatcatcattttctGTACAATTCTTTACTTATGTTGGAG
ACACAAGAACTCGAGTGTGTCCAACGAAGATAAAATCATGGTTGGATCTC
CACCAGTATCCTCGCATGATAATGTGGTGGATATCTCGACAAGCGAGAAG
AACTGAGAAAAACTTATACTAATTTTCGactcgtcgttttttcacacaaC
GTTCCAA
Run BLAST on NCBI

transcript from alignment at sc0000081:145041..156968-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008027 ID=TCONS_00008027|Name=TCONS_00008027|organism=Clytia hemisphaerica|type=transcript|length=11928bp|location=Sequence derived from alignment at sc0000081:145041..156968- (Clytia hemisphaerica)
AATTGAAATTTCATATTAAATCAAGGTGGGAAATACAAACAAAATGTTTA
TACGTACATTCATAATATGTTACGTAGTCTACGTTAGTTTTACGTTAGGG
GAAGAAACTATCGTTCGTACGGCTACGGGAGATTACTTAAACGGACAGGA
CCTTGATTGTGGTTTTTACGGCGCAACGGCAATTGGAAACGATACATGTT
TTTGTGGTAGTGGAAAATCATATTTCACGAACTCATCAGGTTCCTCGTCT
TGCTTTTTTGGTAGAGGACAAGAAGAATTAGGTATGTTTCTTTATATAAT
TTTTTTCCTTATTTCTAATCAGATTTCTATTACATTGACAAATTAAAGGT
TTTGTTTTTAAATAAGAGTGATGTCGTTTTTGCTTACTCGTCAATTTTAA
TTCACAAGCTTTTTCATATTGGATTGACACCAATGTGGAGCAAGATTGTT
CAGAAAGAGGGAAATGAAAAGATTTTTTGCTTATGTCAGCATAATATAAC
AAAAGGCAGACATTGTCCTGATATCAAATATGTGTCTGATATGAAACGAG
AACACTTATGTAAAAATAAAACTTTAACTGCTATATACAATTTTGCTTTT
TTGTGGGCTGCATTTTCACCATGACTTCGCGTTTGTTGAAAATTACTTCC
CCCCCTCCCTCTACAGAGGTAATACTTTTAGGTTTAAATATTTCAAAGGC
ATAACCAGTTGAAAAAATTTTCTTTCTATAAGACATAACCTGATGGTCTA
TTTGATGCAGATTTGGTGTAAAAAATAAGTTAAATAAACGAGTCTAGGTA
ATGTTCTAGTTGGTGAGTTGGGGAGTTGGGGAGTTGCTAGTTTCGAGTTG
GGATGTTCGTAAAACTTTACGGCGACCGAAAATTTTCTAATTTAAACTAA
TGTAGCCCAAAAGTACAAATTTCAAATTAGCCAGTACCAAACATATTATC
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNAATCTTTAAATACAATGATTGTCAAACAAATTTCCCAAAAAATAT
TGATCATACTGCAAGTGATGCTTATTGTATAAAAGGATATAAGTTGACAG
TCATCTTAGCATCAAAAAATTCGTAGAGATAGCTTATAGAGCTAGAAAAA
TAATGACACTTTCTTTTATCACTTATCATTTTATCATTGGAATTGACACT
TTTTAATAAAAATTTTGATCACATTATAAAATACAATGGTTCTAAAGTCA
CTTTAATCAAGAATAAACCAGCTGCGCTGGAAAGTCAGCCCAAAAGGCTT
AGAAGGCTTAGAAGTACAAATAAGAGATCTAGCTTTGTTAAAATCTGAAA
AGCTTGAAAGAGCGTATCTATTTGCTTGAAACGTTCAGACGAAAAAGTAG
TGGTGCATAGTGGGATCTGTCCAAAGCAGAAGTCGGTGAAACAAATTGAT
ACCATTGCTGTATTATTTGAATTTCGCTCCTCAAAAAGACAGTTGATGAA
TTAGCCAATGAAAGCTTGTTTTAGTTTCTCTTTTCAAACTGCCTCAGAAA
AAAGCGCGATTTTTTTATTGTCCAGTCGTTTACTCATTTTTATTCAGTGA
GTGAGTCCTGCGCTTGTTCAACTGTTAAAAATGTGAGTCCAAAATTGGAC
TCACAGCTCGAACCTGTCTAGTTTATATCAGAGATATCAGATTATAAAAA
ACACTCGACGGGTGTCTTGTCATGACAATAAAATAAAAGACCCAAATAGA
AGAATTTCTACAAGTAGTATATTTCTTTTATACTCACTTTCTCTATAATT
AGTTCTCTTTCTTTATTTACAATGAAAAAAGTATCTTTTATTTACTATGA
AAATGATGCAAAATTTTTTCTTATTATTAATTATACACGTCTTTTTATGT
TATGTGTTTTTCTCGTCCTATTTTATCTTACTAAGAAAAAATTATTTTCG
CGCGCTAAGTAATTCCGAAATCCTGTTTCCCGAAAATAATCCAAAATCGG
AATTAAAACTTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTTGTTTTACAAGTTTGTTTTGGACACGT
GATTTTAATTGTTCTCTTTAATGACACGTGGTTCGCGCAATGTTTACATT
TTACTACTGTTATGTCCCTTTAACGACGACCAGCTGGAAAAAAATCGTCG
AACCGATTTGAAGAGTCACCTGGGCTGACTAATTATATTTATACTCAATG
TGATGCAGGAAATATAAATGGATATGAATTGACAGTAGAAAATAGCTTTC
CATGCTCTCAGCGCACGTGTTTAAGGCAAATAAGCATATATTACAGGTGG
TATATGTATTATACGTATTATATGTGTTATATATTACTCTCAATCTCATA
TTACATTTACTTTCAAAATCGTACTTTTGATGTATGTTATTCTTTTTCGG
TAGCCGGTAATTCTTTAACTCCCCAACTCGAAACTAGCAACTCCCCAACT
CGAAACTAGCAACTCCCTAACTCGCGACTAGAATAGTTTCCAAACTCTAA
ATAAACCGAAATAAAACAAAAGATTCTTTTGAAGAACGACAAATAAACAA
AAGATATGTTCAATTTACCTTTTTTATTATTTTTTATCAACACTTTGCCT
TCATTACACTAAATTTGGACATGGATGGCCTATTTTAGTACCTTTTTTAT
TGCAAAAACATTGGAGTGATGAGTTTGTGAGTGATGAAGTTTGTTTCTGA
GTGATGTTGTTTATGTTCGAGAACAATAGAATTACAACGTGAGATACGTG
TGCGTACAAGACATCCGTATTGGCTAATTTTTAGATCGGTATTTTTATTT
CAGGATGTACAGTTTACAATATGAATGATCCACGAGACCAAATTCAAATT
TTGAACATGAGTGTGGATACGCTCATTGATCTTAATTCTGATAAAGGATT
ACAGTGTCAACCAACACCTGTTGTGTTGAAGGAATGGGTAAATGAGACTT
GGGTCAATATGGAAGGAAGTAACTTGCCTGTTGGAATTAATTCAAGAACT
GTAGATCAACCTGGTGGTGGTGCTAAAGTCACTATCAAAACACTTCATGT
ATGTATTGCCGGGGAGGGGGAGGTACTTAGGCAAAATGGGTGCCGGGTAT
GTGCGAGCCATAAGGGTACCTTTTCTCATTCCTCAAAGTCTCTCAAAGTG
GTACAAATTCAAAAGTTAGTCTCTTAAAGGGTCCCATAATCATGAAAATC
AAAAATTTCTCTCTCAAAGGGTCACTATTTCCAAAAATTTTGACCGAAAT
TTGGTGAAAATCAAACCAAAATTTGGAAAAAATGGACCAAAATTTAGGAA
AAAGTCTCTCAAAGGGTCTCAAAATCACCAAAATTTTGTCTCTCAAAGGG
TCGATTTTCAGCTCGGACATACCCGTCACCTTGCAAACCTAGTACCACCC
GGATGTATTGTATGATCTTTTATCTGGAGGGGTATAAGAATTGTAATCCC
TGAGAGATTTTTGTCGTTATTTTACTTAGATCACGTTTGCACGTGACGGT
TCCGTTTCGCTCCGAAAGGAAATGGAGCCATTCTATTGGTTACATTCAAG
TGTTACGTCACTTCTAACCAATAGAATGACTTTATTTGTTTTCGGAGCGA
AACGGAATCGTCAAGTGCGAACATAGCCTTAGACGATCCTATCGTCTACA
CACAATAATAAAAGAGGCGTGATAAATCTGTAAATGGAATTTAGCCCAGG
CGGAGTGAGCAGTGGTGGAGGTGTTTACAATCTTTCAAACTCTACCACCA
CTATTTTTCTTGTAAAACGCCGTGATGTGTGTAAACTCTACACATATATA
TTTTCCACGTTTACTATCCCTCCTACGGACGATATCATCGTCTAGCCGTT
GCTATGTGGTATGTGCCGCCTGACTTTGACCCTCGGACCTTAAGCGAGGC
TACAAAGGAGGAAAAAAAGAAAAATTTGTGACCCTAATTAGGCTAATTCA
TAAGACTCGTGCATTTGTTACATGCTATTTTCTATTCAATTTAAATTGTC
AAATTTTGGAAAATGATGACGTCATTTTGATACCTTTTAACGCTTTTTAC
TCACATTTAGTACATTTTCAGACTTTTATGTAAGCAAAAAAGTTGGTCAG
CATGAAAAATACTTTTTAACGGTATATAATATGCCTATGTTTGAAGACAT
CAAAATTTCAAAAGAATTCAAAATCCGCCATTTTGAAATCCCACCATTAT
GGAAAATGCCCAAGTTGAGGAAAGTGGTTTTGTTGCAATTGTAAAACTTA
TAATCTCAATTCACAAAAGAGTGTTCAAACCATAAAAAGTTGATTTCTTT
AATGACGTAGAAAAATACCATGTACTACAATATGAATCCTATGAAATGGG
CTAATCGGGACTAATTTGACCAAAATTTCGGTTTTGCAACTTTAAAATTT
CCTATTTTTCAGAGCTTTAGTACTAGTAGGACTTCCAGGTTACACAAAGA
CACCTTTAAGGACAGTACATACATGTAACCTTCACTTGTTTTGGTATCCC
CTTGGCTATTGTGTTAATTTCAGTTCCATTGAAGTAAAAAATCATCAAGA
TTTTATTCAAAATGAAATCTGTTTCGTTTTGTTTTAACACACACTGTAGC
ATGTCTTATAGATGGACCTGTCTTTTCGAATCTGTAGGGGGTACCCGATT
CCACCATTCCGTCAAATTTTTCCTTAAATTCCGTTAAACCTTCTAAACGA
GCACAAAAATTCCGTCACCTTAAACTTCCATAACATTCCGGAAATTTTGA
ATAATCTTATACCCGATTCCAAAATCCCGAACAATTTTTTGCTAAATTCC
GTTTTTCTTCTGAACTGAAACAGAACAAATTTCCGTCTCCGAAATAGGAT
CGTATTTCCTAAATTCCGTCCAAATTTGACGTCAAATTCTGCCACTCCGT
CCGAAAAAAAAGAATGGTTCCGCTTTCCGCCAACCATGAACTCCCCCCCC
CCAAAAAAAAAATTATTCTTGTAAAATTTATTATTTCTTTTTCTTATAGC
TTTACCCTGTAGTTGATGAAGCTAAAAAAGAATATTTACAAGGAAAGCTG
GTCAGATTTGATTTTACTGTGTGCAACCATTCAAGCTGCCTCTTACTCAA
ATACCCTGGAGAAAGAACCTGTAAGCTATTAAACTCTTTTTGATGAGATA
AATTTTGGTAGTTGAGCTCATCTGTATCTAGACCATCTAAAACTAATGAT
AAACCAATTATAAAAGATTTATAAGCGCTCATGTCATATGCAACTTTTGT
AAATGAAGTATTCGGTAACTTGGTAGCATTTCCTACCCAGACATTTCTGT
GACTAATTGTGATTTCGTCGGTTTGAGAAAAAGATCTGTGGTGTATACTC
AGGAGGGGTGACAAGACGGTTGCCCCGCGCGATAATTACTCCCCGGGTGA
TTGCCCCTTCGGACAATTGCCCCCGGACAATTAACCCCAGGACAATTACC
CCCCAGACAATTGCCCCCTGGACAGTTGCCCCCAGACAATTGCCCCCAAA
CATTTGTCCTGGGGGTAATTGTCTGGGGGTCTCCATTACCCCCAATTTGC
AATTTGCTAATTAGAACTAAAAACATTCTCAGAGAATAATTCTAGTTCTA
TCTATATACTCTGCGTTTGATTTAATATTCAGGTTTTTTATCGACCTCAT
TTTAGCCTGTAGTGTATGCTTGTTAATGTTAATATTTAAGTTTATTAAAC
CATGCTCGATTTTCTCAAATATGTGTCGTGGACTCGGTGGGTTAACCCCA
TCCTACTGGAAGATTTGGCTAATATTTCATCCCCGGTGGGAAAAATACCC
TCTAATTTCAGACTAACTAAGAAATTGATTTTTTTGAAGTGAACGTGTGA
CCAACAATTTTTACTCGTTATATTTTTCATAATATATTTTGAGACATTGA
TTTTTTATTGATTTTCACCATGCTCACTTGTTATCTAATGTAAAAAAGTT
GCACTTTAAAACCTTTTCCAATGGGTTTTTGTTAGCTCGGAATAATAGAA
TTCATTCCATTCCCATTGGCATTTCGATAGAAATTTTTATCACCGTCGTG
GAAAAAAGTTACACAGGTGTTGTGAGACAGGGATTTGTAGAAAGGAGTAC
CCTAGATATTGTTAATTTCTTTGCAGGGAATGCACCCCAGCCGCCCACTG
AAGCACCGACTACAACAACAGCTGCGCCCACTACAACAACTGCGGTGCCT
ACAACCGGAAGTGGAGGAGGTGGTATTAACGGTACTAACAGTACTATCGC
TACACCAACGGTACATTTTTCATTTCTTTTGTTTTACACTAATATAATTA
GCTAAAGAAGGGCTAGTACACCTTTTTCGACCATAGCCGCTAATTGCTAC
GTGGGCATCTTTTTGTCCGTTTTACCATAGAGGTATAAAGAAAGACAGGA
GATGAATTTGTCGGTAATTGGTCGTTAAAGTCTTTTGATTTCTTTTATGT
AATAAATCAAAAGAAATTCTAGGCTCGCCCGATGAAATACGACTTTCTAG
TAGAACTCAAGTTTGCTCTGAACATTCTTACTATCAGCATCGAAGATTTC
TAGGCTTCTAATATACGAGAATAAAATAAAATTTAGCTCCACGAAATAAG
TTTGCGTTCAATTTTGTCATCCGTTAAATTTTGTTTTGAAAAGATATTTT
CTCCAGCCAGAAAATAAAAAGTTCTTTATAAGCACACACAATTTCAGACT
CAATTTGTAGACAAAAAGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNCAGACCCAATTTGTAGACAAAAA
GTCGCTGGAGAATTTTGGAGGAAAGTATTAAGCAATAGAGTTCACCTTGA
AGAAAATGTTGATCGAAAAATCTTGTATTTTGATGAAGGATTGCAAAGTT
TACAGGCCCTTATTTAATCCAAATATTTTCTAACACCAATGTCAGAAACA
ATGAATCTCGTCTCATCTTATTTCCAACACTTAATTTAGCCAATAAGATT
TCACCTATCAACAAAAAAGCTCATTAAAAATGCACGATATATGAGATTAT
GAGCATGCATACCTCGTATTTTTTTTAATCGTAGGGCGAGCATGGTTACA
ATAGCATACTTCTCCTGTTTCTTTATACCTCCATGGTTTTACAGCCCTAA
AACCGAGTCCCAATCTTTTTTCGCACCTAAAGACAATAAAAAAAAGTGTA
AAAAAAGGATTGGATCGAGTTTAGGGTGGTAAATAAACAAATAAAGTGTG
AATTTAAAAAGCATAAACCAAATGCTTTTTGAAAGATTATAGAAATGTAT
TTTCAGTATGGTACCAAAAATATCGTCTAGTTTCCCCGGGAATAAGAAAG
CCTAACCGTCCTGCTGTGTTTTACCGAATATCTTTCTGCATTTTAGCGAG
CTTCAATAGTTGTATTTTACTACCGAACATCTTTTTATTGTATTTTACCG
AACATCGTTTTGTTGTGTTTTACTCATTGACTTCCAGGCCCGAAGGGCTA
GACTCGAGACTCCTGGATTGGAAATGAAGTCACTTATTTCCCATTCAGAA
CGCCTGCACGTGGTTTTTACACAAACGGTGGATTGAAAGTAAAATCTATC
GGTAGATTTAAAAAAAATGCAGTCCTCAAAAAGAAAGGAAGCGCTATATT
TAATTTGTTGTCATGATTGAGGTGTGTTTTAGGTGCGTTTTGGATGGGAA
ACAAGTGACTTCACTTTTACTTGCCTGGGAAAAGTTAGAGATTTTACTCT
AGCCCTTCAAGCTTTAAACTCGATGGTTTTATCCAATATATTTTTGTTGT
ATTTTACCTAATATCTTTTATTGTATTTTACCGAGCATATTTTTTATGTA
TTTTACCGAACATATCTTATTGTATTTTACAGAGAGAGCCGTCGACTGGG
GACGATAATGATGACGAAGACCTTCTCATCAAAATTCTTGTTCCAGTGTG
TGTCATCATTTTCATCATCATTTTCTGTACAATTCTTTACTTATGTTGGA
GACACAAGAACTCGAGGTATAATGTCGAAGAAAGGTAAATTGTTTTACCG
CGCCCTCTGTGAGCGAAGGATTAGCCTATATCATAGGATTCGTGTTTTTA
GCACATGATATTTTTCTACTTCACTACTTTTTTACGGTTGAACAGTCTTT
TGCGAATTGATCAATAATGACAAAGGATCTATTTTTTCTACGTCTTTCTT
GAAGGAAAATTTGCAATTATTTGTACATTTTTACCCTGTAAACTGAATAG
AAAATAGCATGTGACAGGTGCACGAATCCTGTGAAATAGGCTAATAGCGA
GTTTATGTATTTGCACTTTTGAGGACGGCGGATTGATTGAAGCGATTTGA
AATAACCCGCAATTTTGACCCGCAAAGTTGAGGACTGTAAAAGTGCTGAT
TTACCGACGTCCTCAGTCAGGATCTAGACAAATCAGAGCACGTATACATA
AACTCGCTTATGTTCAGACGTTACGGTTTCACAGTGTTCCGAAATGAAAC
GTTTCCAAAAACCAAACAAATCATAGCTTCAAAAAAGAGTTAATTAAAAA
GCAAAAACGGATTGAATTTGCTCAAATCTTTTCGCACAGCTACTTCGTTT
TCCTGCACAGAAAAGTTCTGAAACCAACATGAACACGTAAAGAAACCCAT
GGCAGAGCGATTCCAAACCTTAACGTCTGAACATGATCGAAGTCTCCCAG
TTTGACATACACACACACAACTTTATTTCAACGTTCAAGTTACGCTCATA
CCAGGCTTGTGCATAATGTTAATTCAACGTTCGTCTCACGTTATATGGAC
GCTGTGAACTTTAGATAAACGTTGAAACAACATTCTGTGCCGACTGGGTA
AGAGAGTCTATATAACATTAGTGTGACTTTCAATTTGAAACAGCATTATA
ATCCAGTTGGTCTTTCCTCAACGAGTTAACAATGTTGACGATGACCACGC
CTCCGCCCCCACAGTCCTGGTCAAACCTCCTACTCCCCATATTCAGTTTC
ACCTCATTATTAGAAAACTGTAATGGACTAACATCCCTATAGAGAAATAT
ACTAGGTTCTTAATGATATCCATTGGATTCTGGGAAAACCATAGATATCT
TATTTAAAGCCACTCTGTATTTCCCAAGCAACGGCAGGTGAAGCAAAATA
ATCCGCCATCTTTGCTGAAAGTAGGTCACAGTAGGTCACAGTTCTACCGG
CAATTTGTTCAACCAAGCAAAAAAAAACTAAATGGTTCGAAGCGATGAGG
TGAAAGATTTGATTGATCTGCCGGCAACGAACTATGGTCTATTTATCAAA
GATGGCGGATTATTTTGATTCAAATAGGGACGGAGTAGCTCTTTATAGTG
TTTTATATAAGATATCTGTTAGGAAGACACATTCAAAACAAGAAATTTTA
CCAAAAACAAAGAAAAACCCCTGAAGCGTTATCGAAATAAAAAAAAACTG
CGTGGGCAAAGAACTAAATGTGTGAAATACCCTACCTCTGATAGTAACTA
TGGCGAGTTTATGTATTCGAGATACATCGAAGGAGACGGTATAAAGCAAA
GTTTGCATTTCTCCAAAATCGCCACGACACCGAAATGCCGTGGTCTTTTC
AGGCGAGCCAAGGCGATAAAGAGCCGCAGACCAACTATCAACTTTGTGTT
GCGTCGACTTCACTTACCGTTGGCCTCGATATCTTCCGATACATAAACTC
GCTGCTACTTCTTTGGCGGCAAATGATAAAATTTTAAATGTCTGATCTAC
AAAAGTTGCCCCGATAATTTATATCAACCCTTTTTGGACTATGTATAACT
GGCTGCAATAAGATTAGCAGTTATGATAAAAGAAAGCTTTTTCTTTAACC
TCGTGAACTAGCATTGGCAAAAAGTCGATAATTTTCAAGCGCAAACACTA
ACTAACCTTTGGACAGTTTCTCCACCTTTTTGACCCACCTGGATGGTTTC
GTACTAAATTGTAAAGGGCCTGGACACACTTGATCACTTTTTTGGTGAAG
ATTTGGGCGTAATGTTTAACCGTTTGTTTGTCTTGCAGTGTGTCCAACGA
AGATAAAATCATGGTTGGATCTCCACCAGTATCCTCGGTAAGTGTTTTTC
TTTAACTCGAAACTCTAAACTTCCCAAACCCCTAACTCTAACAGTCAATA
CATCATCAAATAATCTGAAGATACATTCGAAGGTCAAGAACACCTTCAAA
TTAGCCTATGACTATTTTATATAATCTAATTAGCCGAAAATCGACAAAAT
TTCGATTGATGCACTTTCGAATGTCTCTTCAACTCGAATCTCTACATCTC
GAACGAATGTCTCTTTAGCTGGAACAAGTTTTCACGCTACTTCATTTAAC
GATGCCTTTGAAACTCTACTCCATAACTCGAGCAAAATTGTGTTATCCCC
GTGCAGGTTATTAAGACTCCACTCTATGCGAGACAACTGAACTTAAGTAT
AAGTTATAGGGGATCGTATGGAAAACTTATCAGTTACTTAACAATTACTG
CATAACCCTATAACACATGCTACATGTACTATAAATGACTTCTTCAGTCT
ATCATTTTCCTTCCACCACACCGTTTTTTATACATAAATTTATTCCTAGT
AAACACCCCCTTCTCACAGACCCACTGGAACCCCTTCCCACTGGAAAAAA
TTGGCCAAAATATTGTCCCCGGGGGAAAATTATCCTCCAATTTTTGTCCC
CAATGAAAATAATCAAATAAACCAATCCTCACTGCAAATTATTATGTCAA
TTTCCCATCCCCACTGAATTATCTGACTTGAAAACATGAAAATATGGGAA
TATCAATCCCCATCAAGTTTCAGTCCATTTTTTTTATCCCAACTGGCTGC
TGGGTCTGTGAGAAAGGGGTGTTGGTAAGGAATATTTGAATTACGAATTC
TTTATCATTTGCATCTTTGGGGTTGGTGGTTTTTTTTCGGGGGGGGGGGG
GCACTCCAATTAAGTGACCTACCGGACGTGCGGCCCTTAAGGGTAGGTTT
TTTGGACTTTGGAAAGTGCACTGTTAGGGTTGATTTGTGGGAAAAAGTGC
AATGTAAGGGTGTAAAATTTGAGAAAATAAATACCAAATTTTGAGGTTAA
ATTTGAGAAATTTCAAAAAATCTTTCCCTGAAAAGGGCAAAAAATTACGA
AAAATTGTACTCTACTATAAGGGTCAATTTTCAGCCAAATTTGTCCTGAA
CTGTAAGGGTCCGATTTTAGAGACCTGATTTTTGGCCGAACATACGGTCG
TTTTCAAAATCGAGTACCCCTCCGGGTTTATTTTACGACGTTCCATTAGA
AGTCTGTCGGTCAAATGTATAATTTTATGTTTTAGCATGATAATGTGGTG
GATATCTCGACAAGCGAGAAGAACTGAGAAAAACTTATACTAATTTTCGA
CTCGTCGTTTTTTCACACAACGTTCCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004519XLOC_004519Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008027-exon-sc0000081-1575043694:156688..156968TCONS_00008027-exon-sc0000081-1575043694:156688..156968Clytia hemisphaericaexon
TCONS_00008027-exon-sc0000081-1575043694:153471..153715TCONS_00008027-exon-sc0000081-1575043694:153471..153715Clytia hemisphaericaexon
TCONS_00008027-exon-sc0000081-1575043694:151399..151519TCONS_00008027-exon-sc0000081-1575043694:151399..151519Clytia hemisphaericaexon
TCONS_00008027-exon-sc0000081-1575043694:150259..150392TCONS_00008027-exon-sc0000081-1575043694:150259..150392Clytia hemisphaericaexon
TCONS_00008027-exon-sc0000081-1575043694:148453..148586TCONS_00008027-exon-sc0000081-1575043694:148453..148586Clytia hemisphaericaexon
TCONS_00008027-exon-sc0000081-1575043694:146382..146430TCONS_00008027-exon-sc0000081-1575043694:146382..146430Clytia hemisphaericaexon
TCONS_00008027-exon-sc0000081-1575043694:145041..145133TCONS_00008027-exon-sc0000081-1575043694:145041..145133Clytia hemisphaericaexon
TCONS_00008027-exon-sc0000081-1510915933:156688..156968TCONS_00008027-exon-sc0000081-1510915933:156688..156968Clytia hemisphaericaexon
TCONS_00008027-exon-sc0000081-1510915933:153471..153715TCONS_00008027-exon-sc0000081-1510915933:153471..153715Clytia hemisphaericaexon
TCONS_00008027-exon-sc0000081-1510915933:151399..151519TCONS_00008027-exon-sc0000081-1510915933:151399..151519Clytia hemisphaericaexon
TCONS_00008027-exon-sc0000081-1510915933:150259..150392TCONS_00008027-exon-sc0000081-1510915933:150259..150392Clytia hemisphaericaexon
TCONS_00008027-exon-sc0000081-1510915933:148453..148586TCONS_00008027-exon-sc0000081-1510915933:148453..148586Clytia hemisphaericaexon
TCONS_00008027-exon-sc0000081-1510915933:146382..146430TCONS_00008027-exon-sc0000081-1510915933:146382..146430Clytia hemisphaericaexon
TCONS_00008027-exon-sc0000081-1510915933:145041..145133TCONS_00008027-exon-sc0000081-1510915933:145041..145133Clytia hemisphaericaexon
TCONS_00008027-exon-sc0000081-1491911889:156688..156968TCONS_00008027-exon-sc0000081-1491911889:156688..156968Clytia hemisphaericaexon
TCONS_00008027-exon-sc0000081-1491911889:153471..153715TCONS_00008027-exon-sc0000081-1491911889:153471..153715Clytia hemisphaericaexon
TCONS_00008027-exon-sc0000081-1491911889:151399..151519TCONS_00008027-exon-sc0000081-1491911889:151399..151519Clytia hemisphaericaexon
TCONS_00008027-exon-sc0000081-1491911889:150259..150392TCONS_00008027-exon-sc0000081-1491911889:150259..150392Clytia hemisphaericaexon
TCONS_00008027-exon-sc0000081-1491911889:148453..148586TCONS_00008027-exon-sc0000081-1491911889:148453..148586Clytia hemisphaericaexon
TCONS_00008027-exon-sc0000081-1491911889:146382..146430TCONS_00008027-exon-sc0000081-1491911889:146382..146430Clytia hemisphaericaexon
TCONS_00008027-exon-sc0000081-1491911889:145041..145133TCONS_00008027-exon-sc0000081-1491911889:145041..145133Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000081supercontigsc0000081:145041..156968 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.316989	0.282381	0	0.157578	0.001883	0.431656	1.63673	0.440784	14.9978	12.0101	0	0.210223	0.00162648	0	11.0524	24.6743	0	0.355145	0	0.203861	1.48061	1.15253	0.0852373	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00008027 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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