TCONS_00008010 (transcript) - C. hemisphaerica

Overview
NameTCONS_00008010
Unique NameTCONS_00008010
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1672

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00008010 ID=TCONS_00008010|Name=TCONS_00008010|organism=Clytia hemisphaerica|type=transcript|length=1672bp
TTCAGTAGCAGTTTACTAGTGGATTAAAAAAATGGGAAAAGAAAAAGGAG
GATTTCTGACTCCAAAAGCAATAGCAAATAGAATCAAATCAAAAGGGTTG
CAGAAGCTACGCTGGTATTGTCAGATGTGTCAAAAGCAATGTCGTGACGA
GAATGGATTCAAATGCCATTGTATGTCAGAAGCTCATCAAAGACAGTTGC
TATTGTTTGCAGAAAACCCAAATAAATATCTAGATTCATTTTCACAGGAC
TTTTATGATGATTTCGTCAcattattgaaaagaagatttGGCACCAAACG
TGTTCACTGCAACATTATATATCAAGAATACGTTGCAGAGAGAGATCATA
CTCACATGAATGCTACACAATGGGAAACTTTGACAGAATTTGTAAAGTGG
CTTGGTCGTGAGGGTCATTGTACCGTAGATGAGACTCCTAAGGGATGGTT
TGTCACTTATATTGATAAAGATCCTGAAGTTATTGCTAGACAGAAGGCTG
CACAATCACAAGAGAGAAAAGAACTTGATGACCAAGAAAGAATGGCAAAA
TTTATCGAGAAACAAGTTGAACGGGCCAAAGCAACTACTGGTGACCAGga
aGAGAGCAAATTTACAGAATTACAAAGGGAAGATGAATCTGAGAAAGtca
ctttcgattttggaaAACCAGGCTCTTCAAAAAGCAGCTCGTCTAAAACT
AGTTCCTCTAAGACTAGCTCTTCATCTTTAGAAAAAAAATCCATCTCAAT
AGCAGATAAAagtggaattttcaaaaattctgaaaaagaaaagtctTCAA
AAGGAAAATCAAAGGAAACAACAAAACGAAAATCAGCTTTGGATGAAATT
CTTGAGGGTATTGTTGTGAAGATCATTACTAAAAAGCTTGGTGATAAATA
CTATAAACAAAAATGTGTTATAAAGGAAGTGAAAAACTTGTTTATTGCTG
TAGTTGAGGTCTTGAATTCTGGAGATGTCATCAAACTTGATCAAATGCAT
TTAGAGACTGTCTTGCCAGGCCCAGGTCGACCATTGAAAGTAGTGAATGG
TGAACATAGAGGTTGTAATGCTGAAATGATTGGCCTGAACCAAGGAAAAT
TTACTGCATCAGTCAAATTAACTTCAGGTCCACAGAAAGGAATTACAGTA
AAACTGCCATACGAAGAAATATGCAAAGTACCTTCAGGATCTTGAAGAAA
AAGAATAACAATGTGCAGATGTCACAAAATGAAGCCATGAGAGTATTCAA
AATGCTGTGTAGGTCTGATCTGAATAACTTCAGTGCAAAGAGTAAATAAT
TTTATGGCATGGTCGATGAAAAGGATGTCATTGAAATCCAATAAAAGTCT
AATTCCTCCAAGAAGCACGAGTTTTCTACAACTTTCAAATGAAGatgcaa
aattgtttttattgggaAAAGCAATCAATCTTTCAAAACGAATCAAATTC
AAAACCATTCAGATTAgggttttcaatatttttatgcATATTGTATATAT
TTTAATTTCTAATTGGTGTTATAAAGTAAAGAAAGACTTATGAGATGGTA
TGGGGATCTGAAACCCCTCACCGTTTGAAGAAAAGAGGTGGGGCATGTAG
CAGATGAGTTGTGAACCTTATACTTTATCTCAGTCTACAACAatgatgtt
ttttaaatttcaaaattctttt
Run BLAST on NCBI

transcript from alignment at sc0000081:575693..582667+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00008010 ID=TCONS_00008010|Name=TCONS_00008010|organism=Clytia hemisphaerica|type=transcript|length=6975bp|location=Sequence derived from alignment at sc0000081:575693..582667+ (Clytia hemisphaerica)
TTCAGTAGCAGTTTACTAGTGGATTAAAAAAATGGGAAAAGAAAAAGGAG
GATTTCTGACTCCAAAAGCAATAGCAAATAGAATCAAATCAAAAGGGTTG
CAGAAGCTACGCTGGTATTGTCAGATGTGTCAAAAGCAATGTCGTGACGA
GGTACTTattcataaaatttattttcatacaTTTTAGAGGCTTGATgtta
taattattttaaaatattatatgaattatattatttttaaaaaaggaaTG
AAAACAGTCTGACTagtaattttaatattttgtcaACCCAAAAAAATCTA
AGCATTTTGATTAGTTGAGAACATTGAAATAATTGTGATATTAGATATTA
GATTTTTCACATATAAATATGAAAGCATTGACTCCATGTTGTCCTCAGTG
taagaatttataaaaaaacatctctGGAAACTACTTCGAAgtcttttgtt
tagttttggTAATTCCTCCTGagagtcaatttttttgtcagtttttctca
aaaagttcattcgaatcaggggggggggggcttgcagttactccttgaNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNccacccatgttgcagttagtccactggtggagtaactg
ttttcccaaattttggtttatataccaccacggtagtaattgtcatagtg
tttataactgcatgaccccccccctgttcgaatggtcaaaattcaaaaag
agaaaataatgcAGGAGGGATGATggatataataaaaaaaaaaaaaaaaa
tgcattgaaaagattttttgggTCGACAATGAATGACAACATGACAACAA
CATGACTTTGAGTGCAATATGAGAAATACTTTGCTTGGTCTAagatttta
taaatatttttacaatatttttaaatCTGGTATATATATATACGGagaat
aagaaaatttaaagtgaTTTTACCAACGAAGAGGAGAAACTTtggatttt
ttgtgaaaatctggtacgaCAGTCCTCAGCTTTAAAGACCTAGATAGAAg
ggtgatgatgatgatgatgatgagtcCTCGTACCCATTGTGTTGTGACTG
TTTTAGCCTCAGAAAAGTATTACAGAAAAATCTCAGaacttgtaaaatat
ttctGGTATTGCATATAAGTCATGTGATACTAGTATATACATGGTGGAAT
GATGGAGTGGAATCTTGATAATAATTTTATTTAACTTGTTTTAGAATGGA
TTCAAATGCCATTGTATGTCAGAAGCTCATCAAAGACAGTTGCTATTGTT
TGCAGAAAACCCAAATAAATATCTAGATTCATTTTCACAGTGAGTATTAA
AAAATAGccttataaattttgaaaaagtaacaAGTCCatagataaatttt
ttttaagcctGACATATGCTGCATGAAATTGATTGCAATTGAAGGATTGA
AGTGTGCTATGAAAAGCAGCAGGGTGACTATTACGTACTAATGCTGCACT
AGTAAAAGCGAAGTTGAAATGGTGGACTAAACTTGAGTTTGTATAAAGTC
TGTTATAAAAACATCAACTGATCTTAAAGCTAACCATGTAGATTGTTTAT
AGAGGTTCTTTTCCCtcattataaaatataatctcTGAGTTACCTGTATG
TTTTGGTGAGCTTGACTTGACTTCAACATCTTCAAAGTTGAAGTAGAATT
TCATGTGCTTATAATATCTCTGCAATTCATTATTATTTTCAGGGACTTTT
ATGATGATTTCGTCAcattattgaaaagaagatttGGTATGTATTCAAAT
CCCTTTTGCCGCAGATGGATTTCTAACTCAGCCAGGCTCTAAAATGGCAT
TTGGGCctcaattttcatttaaatttgaaaagagTGAAATAAAATTCTAG
TTACTGTAttaaaatctgtttttagtttCCTGGAGATTTGTGCTTGTATT
ACTTATTCCTATAATCAATATTTGTTGGGAATCTTCTCTGTGACTCTATG
GAAATGGAAACACCCAAAGATATACAAAGTGGATATAATGTGTATGTCTA
TTCTAAATTATAGGCACCAAACGTGTTCACTGCAACATTATATATCAAGA
ATACGTTGCAGAGAGAGATCATACTCACATGAATGCTACACAATGGGAAA
CTTTGACAGAATTTGTAAAGTGGCTTGGTCGTGAGGGTCATTGTACCGTA
GATGAGACTCCTAAGGGATGGTTTGTCACTTATATTGATAAAGATCCTGA
AGTTATTGCTAGACAGAAGGTATTTTATTAATAAGAAATATCTactttgc
ttttttaaaccagaTTCATTGTCCTTTCAAATGGTGGACTTGGATTATAG
ACAGATTATCAGAACAAAAAGCCTCAATGCCTGACTAAAATCTAATTTTA
ATGCTAATTTGTAGGACATTTTACTTGTTATTGAAAATtgtgattttgat
ttcaaaccGTGCAGTCCAATCAAACCTATCATGTAACTCAAATCAGCTAT
TGAATTTCTCcctaaacaatttttttctttctaaggNCCAAAGCTATCAT
GTAACTCAAATCGGCTATTGAATTTCTCcctaaacaatttttttctaagg
GGTTCAAGATGtataagattttaaaagaatcattcctatttcattggaaa
gaagaaagataaacttaaattttgatgtattaaATTCGACTCATTAGATC
AGAAGTTGtgctcaattgaatgaaaaagatattgtctgaaagtgctcaaa
aacgttaaaaaatttttgttttccagGCTGCACAATCACAAGAGAGAAAA
GAACTTGATGACCAAGAAAGAATGGGTATGAATACTTATCCATGCCTCAT
TTGTATGACTAACTTTCTTCTTTACCTCCTTTGCCTGTGACTTGAAGCTT
TCAATCTCAAATCTTTGCTAGAAAAAGAACAAATTCATTGCATTGATATC
AAAAGAATGCTAGTTattaaaatttaaacattaattTTCTGGCTGCCTTT
CTTAAAGATGAATGAATAGTAAGGCAGAAAATCAATCATATTTTgttatt
aataaaaaaaaattatttcatccgttaaatttatttttcttgacaGCAAA
ATTTATCGAGAAACAAGTTGAACGGGCCAAAGCAACTACTGGTGACCAGG
TATGGAAATAACGTTTCATAACAGTGAAAGTAGAGATTGTTAATTGATTA
TATCCTTGCAAAGTCACAAGGATATTGTTAGAGTATTGGGAAATAGTGTC
TAGAATATTCCTCACATTTTATCAACTCTCGTCATTATTGTTTTGTCACA
TTATTATCAGCTTTGAGAGGTCTTGACCTTACGGtagatataaaataaaa
atcaattcaCCATGCTTTCCTTTACACCCAAACAATATTTCATATTGAAA
ATAAAGTTGGTATTGAGGTTTTTACTGTACAGTATGTCAGTTGACTCAAA
TTTAATTATAAACAATATTTCAGTTAATGTCATATATTATTATTGActat
tgatttgttttttttaggaaGAGAGCAAATTTACAGAATTACAAAGGGAA
GATGAATCTGAGAAAGGTTGTAGTACttgatttttctcattttttcttaA
ATCTTACACAAAATTAGCTTGGTTTTATTTTTGAGAACTTCTAAAAAAGT
CAACTCTTAATATGGTACTTATAgtcgattttcatttttacattttacac
aGAATTTGCTaggctttttcaaaatttcgtcaTTTTAGCGAacattttgt
gttttttcaaCTCCAAAATATTGTGTTGGCTATCAATTTTCTCATTGAtc
tcttcaaatatttttctttttttatttagtcactttcgattttggaaAAC
CAGGCTCTTCAAAAAGCAGCTCGTCTAAAACTAGTTCCTCTAAGACTAGC
TCTTCATCTTTAGAAAAGTAAGTCCTGTTTTTGTATCTGTAGTGTTTTTT
ATGTaccaaaagacaaaagaaaattctCTCTACTTTTTCTCTGTGTGCAT
TTGTCTTTTTTCATTCTAATCTTTTCTTCCTGTCTAATCTTTTTGATGCT
AAAACTTTATAATTACTTTAGAAAATCCATCTCAATAGCAGATAAAagtg
gaattttcaaaaattctgaaaaagaaaagtctTCAAAAGGGTAAGCTATT
CTCATATATTCTATGTTTTCACTGTTAATTTCTTTGAGTTTTTTGATACC
ATTTGTGAGCTGTCTGTTTTATATGATATACAACAGGCTTTCCATACAAT
CGTTTTATAGAAAATCAAAGGAAACAACAAAACGAAAATCAGCTTTGGAT
GAAATTCTTGAGGTAACTCAAATTTAAATGTCTGTCTATCCAGGTCTATC
TGTTTATTAAAGTTTTGGGAAACTTGTTATTTTATAGACTTTGATTGACA
TTCTGGCACTTGTTAAAGCCAATCTATACATATATATGAAGCTGTTTgct
gaccttgcaaaaactATGTGTGTCCACACACACGCTTAAAATTGTCCTTG
TATTCTGCTCAATTTTAGGAAGAGAATgctttgaagaagaagaaactaAA
GgaagtcaaaaaagaaaattggctGACAGAGGTTTCTACATGTCATACTT
TTTGCAGCATAATTTTTAATTGTCAGATATAAAGTTGACTATTATGTTGT
GCTGGGCTAGTTGTCCTATGGTGTTGCTGACAAGTCTAATATTTGTTTCT
TTCAGGGTATTGTTGTGAAGATCATTACTAAAAAGCTTGGTGATAAATAC
TATAAACAAAAATGTGTTATAAAGGTAGACCTAATTTctcttgaaaaaga
attttttgttcatCATGTACCAAAGTATACAACAGTGACAAAAATCTATC
CAAATTGTGATGTGCTTCctattgaaataattttttttaatgagtTACCA
CTTTCACTGACATTATATTTGTATCTTTTCAGGAAGTGAAAAACTTGTTT
ATTGCTGTAGTTGAGGTCTTGAATTCTGGAGATGTCATCAAACTTGATCA
AATGCATTTAGAGACTGTCTTGCCAGGCCCAGGTTAAAACTCTAATTTTT
CTACAGATACTTTAATGAGATAAAGTTtcgtggggattaaatttcgcaga
tgGGTCTATCCACGAAATTCATACCCAAGTCTGTaaaatctgcgaaatta
aatccccacaaaagtttatcccattaaagtatatccCATTAAAGACATTA
AAGTATATTGCTCCTACCACTTATGAAACCTAAATAAATTTATTGCTTTC
TCATCCGAATTACATCTCTTTCTTATTTTATGTTGGAAATTGGCTAGATT
CTCTTTTAGCTGTGAATCAGTTTTAATTTTGTTTAGGTCGACCATTGAAA
GTAGTGAATGGTGAACATAGAGGTTGTAATGCTGAAATGATTGGCCTGAA
CCAAGGAAAATTTACTGCATCAGTCAAATTAACTTCAGTAAGTACATTTC
AATCGCTCCCTTTATCCAGTCAGTGAATTTGCtttaaataaaatgataaa
ttacagggacctcaacttttgaaaaatcgTTTTCTTGTTCTTCCATATCC
TAGTGTCTTTAGAAAAGCACTTCGGAGCAAAATTTTTACATACTTAACCC
CTTTATAAGGTACTAATCACCAAAATTAGagcaaagaattgaaaaatttt
tgaaaggcGGACACTTCAAACTAGCAGATACTAACCCTATTCCCTGATGG
TGTAATGTATTAATTCTTCTCTTAAGCCATATTTTGCCCCCTTTCTGATA
TTAATAGACTTGATTGGGCTTTTGTTCACAtcgaaaagttttttatcatA
AGAAATTGGCCTCTAAAGATTGATGGTTAAAAAGATTGGTTAAACAAATG
CAACAAATCTGTTTATCAGTTCAAACAGATGGACACCTAAGAGAATAAGG
TACTAAATGACTACAATATCAAGGCACAGTATCAATgaagatgtttttga
tgatgtGACCTTTACTCTTCTTTACTCAGGGTCCACAGAAAGGAATTACA
GTAAAACTGCCATACGAAGAAATATGCAAAGTACCTTCAGGATCTTGAAG
AAAAAGAATAACAATGTGCAGATGTCACAAAATGAAGCCATGAGAGTATT
CAAAATGCTGTGTAGGTCTGATCTGAATAACTTCAGTGCAAAGAGTAAAT
AATTTTATGGCATGGTCGATGAAAAGGATGTCATTGAAATCCAATAAAAG
TCTAATTCCTCCAAGAAGCACGAGTTTTCTACAACTTTCAAATGAAGatg
caaaattgtttttattgggaAAAGCAATCAATCTTTCAAAACGAATCAAA
TTCAAAACCATTCAGATTAgggttttcaatatttttatgcATATTGTATA
TATTTTAATTTCTAATTGGTGTTATAAAGTAAAGAAAGACTTATGAGATG
GTATGGGGATCTGAAACCCCTCACCGTTTGAAGAAAAGAGGTGGGGCATG
TAGCAGATGAGTTGTGAACCTTATACTTTATCTCAGTCTACAACAatgat
gttttttaaatttcaaaattctttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004513XLOC_004513Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00008010-exon-sc0000081-1491911889:575693..575843TCONS_00008010-exon-sc0000081-1491911889:575693..575843Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1510915933:575693..575843TCONS_00008010-exon-sc0000081-1510915933:575693..575843Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1575043694:575693..575843TCONS_00008010-exon-sc0000081-1575043694:575693..575843Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1491911889:577387..577481TCONS_00008010-exon-sc0000081-1491911889:577387..577481Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1510915933:577387..577481TCONS_00008010-exon-sc0000081-1510915933:577387..577481Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1575043694:577387..577481TCONS_00008010-exon-sc0000081-1575043694:577387..577481Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1491911889:577885..577928TCONS_00008010-exon-sc0000081-1491911889:577885..577928Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1510915933:577885..577928TCONS_00008010-exon-sc0000081-1510915933:577885..577928Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1575043694:577885..577928TCONS_00008010-exon-sc0000081-1575043694:577885..577928Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1491911889:578206..578411TCONS_00008010-exon-sc0000081-1491911889:578206..578411Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1510915933:578206..578411TCONS_00008010-exon-sc0000081-1510915933:578206..578411Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1575043694:578206..578411TCONS_00008010-exon-sc0000081-1575043694:578206..578411Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1491911889:578919..578967TCONS_00008010-exon-sc0000081-1491911889:578919..578967Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1510915933:578919..578967TCONS_00008010-exon-sc0000081-1510915933:578919..578967Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1575043694:578919..578967TCONS_00008010-exon-sc0000081-1575043694:578919..578967Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1491911889:579239..579291TCONS_00008010-exon-sc0000081-1491911889:579239..579291Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1510915933:579239..579291TCONS_00008010-exon-sc0000081-1510915933:579239..579291Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1575043694:579239..579291TCONS_00008010-exon-sc0000081-1575043694:579239..579291Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1491911889:579660..579708TCONS_00008010-exon-sc0000081-1491911889:579660..579708Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1510915933:579660..579708TCONS_00008010-exon-sc0000081-1510915933:579660..579708Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1575043694:579660..579708TCONS_00008010-exon-sc0000081-1575043694:579660..579708Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1491911889:579972..580059TCONS_00008010-exon-sc0000081-1491911889:579972..580059Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1510915933:579972..580059TCONS_00008010-exon-sc0000081-1510915933:579972..580059Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1575043694:579972..580059TCONS_00008010-exon-sc0000081-1575043694:579972..580059Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1491911889:580214..580282TCONS_00008010-exon-sc0000081-1491911889:580214..580282Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1510915933:580214..580282TCONS_00008010-exon-sc0000081-1510915933:580214..580282Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1575043694:580214..580282TCONS_00008010-exon-sc0000081-1575043694:580214..580282Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1491911889:580403..580454TCONS_00008010-exon-sc0000081-1491911889:580403..580454Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1510915933:580403..580454TCONS_00008010-exon-sc0000081-1510915933:580403..580454Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1575043694:580403..580454TCONS_00008010-exon-sc0000081-1575043694:580403..580454Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1491911889:580848..580916TCONS_00008010-exon-sc0000081-1491911889:580848..580916Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1510915933:580848..580916TCONS_00008010-exon-sc0000081-1510915933:580848..580916Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1575043694:580848..580916TCONS_00008010-exon-sc0000081-1575043694:580848..580916Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1491911889:581075..581174TCONS_00008010-exon-sc0000081-1491911889:581075..581174Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1510915933:581075..581174TCONS_00008010-exon-sc0000081-1510915933:581075..581174Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1575043694:581075..581174TCONS_00008010-exon-sc0000081-1575043694:581075..581174Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1491911889:581479..581579TCONS_00008010-exon-sc0000081-1491911889:581479..581579Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1510915933:581479..581579TCONS_00008010-exon-sc0000081-1510915933:581479..581579Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1575043694:581479..581579TCONS_00008010-exon-sc0000081-1575043694:581479..581579Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1491911889:582122..582667TCONS_00008010-exon-sc0000081-1491911889:582122..582667Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1510915933:582122..582667TCONS_00008010-exon-sc0000081-1510915933:582122..582667Clytia hemisphaericaexon
TCONS_00008010-exon-sc0000081-1575043694:582122..582667TCONS_00008010-exon-sc0000081-1575043694:582122..582667Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000081supercontigsc0000081:575693..582667 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.51828	2.10123	1.28683	0	1.25349	0	0	0	7.37799	6.80636	5.10512	1.86398	5.17627	5.38434	6.23204	2.69365	6.81163	4.78645	3.14444	1.0716	4.80021	1.39375	6.30418	6.95095	0	0.874727	0.603253	2.09122	3.76461	4.20884
Blast
[Close]
BLAST of TCONS_00008010 vs. Swiss-Prot (Human)
Match: KIN17 (DNA/RNA-binding protein KIN17 OS=Homo sapiens GN=KIN PE=1 SV=2)

HSP 1 Score: 314.309 bits (804), Expect = 5.666e-101
Identity = 141/208 (67.79%), Postives = 172/208 (82.69%), Query Frame = 2 
Query:   44 KGGFLTPKAIANRIKSKGLQKLRWYCQMCQKQCRDENGFKCHCMSEAHQRQLLLFAENPNKYLDSFSQDFYDDFVTLLKRRFGTKRVHCNIIYQEYVAERDHTHMNATQWETLTEFVKWLGREGHCTVDETPKGWFVTYIDKDPEVIARQKAAQSQERKELDDQERMAKFIEKQVERAKATTGDQEESKFTELQREDESEKVTFDFGK 667
            K  FLTPKAIANRIKSKGLQKLRWYCQMCQKQCRDENGFKCHCMSE+HQRQLLL +ENP +++D FS++F +DF+ LL+RRFGTKRVH NI+Y EY++ R+H HMNATQWETLT+F KWLGREG C VDETPKGW++ YID+DPE I RQ   + +++++LDD+E+ AKFIE+QV R      +QE   FTEL RE++ EKVTF+  K
Sbjct:    3 KSDFLTPKAIANRIKSKGLQKLRWYCQMCQKQCRDENGFKCHCMSESHQRQLLLASENPQQFMDYFSEEFRNDFLELLRRRFGTKRVHNNIVYNEYISHREHIHMNATQWETLTDFTKWLGREGLCKVDETPKGWYIQYIDRDPETIRRQLELEKKKKQDLDDEEKTAKFIEEQVRRG-LEGKEQEVPTFTELSRENDEEKVTFNLSK 209

HSP 2 Score: 110.923 bits (276), Expect = 3.018e-26
Identity = 52/108 (48.15%), Postives = 82/108 (75.93%), Query Frame = 2 
Query:  860 IVVKIITKKLGDKYYKQKCVIKEVKNLFIAVVEVLNSGDVIKLDQMHLETVLPGPGRPLKVVNGEHRGCNAEMIGLNQGKFTASVKLTSGPQKGITVK-LPYEEICKV 1180
            I+VKIITKKLG+KY+K+K ++KEV + + AVV++++SGD +KLDQ HLETV+P PG+ + V+NG +RG    +  +N+  F+A++ + +GP KG  V+ + YE+I K+
Sbjct:  285 IIVKIITKKLGEKYHKKKAIVKEVIDKYTAVVKMIDSGDKLKLDQTHLETVIPAPGKRILVLNGGYRGNEGTLESINEKTFSATIVIETGPLKGRRVEGIQYEDISKL 392
The following BLAST results are available for this feature:
BLAST of TCONS_00008010 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KIN175.666e-10167.79DNA/RNA-binding protein KIN17 OS=Homo sapiens GN=K... [more]
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