XLOC_004513 (gene) - C. hemisphaerica

Overview
NameXLOC_004513
Unique NameXLOC_004513
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000081:574482..582667+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004513 ID=XLOC_004513|Name=XLOC_004513|organism=Clytia hemisphaerica|type=gene|length=8186bp|location=Sequence derived from alignment at sc0000081:574482..582667+ (Clytia hemisphaerica)
ttttgattttcacgattcGTGAATTTTTCATCCACTATGTAAGCTATATT CAAttatttgtttccttttttcaggTGATTTTACTGGAGATATCCAGGGA AAGGGAGAGCACTTTTGTGGGTCATATTATGTCATATTCAGTGGGTTGGG TGGGGGCAAACAACGAAATTGGATGCAAGTTTTGAGAGTGTCGTATTCTG TGAATTAACTATTAGGATCCTGAAATACCAAGATTGCTTACAGGAATTTT TAATCTTCATCATGCGTGATCTTATTTAATTGCCTGTATATGTATGCTGT GTTTACTACAAGAACAAGCTCCCCTCTTCTTCAGCAATCTCTTTgaagta tagacttaaactcccTATTATACCTATACCTATCCCAGCCCAGCCCAGGC GTAGTTAATATCGATacaatcgataatcttgagtaatcgataaataatcg ataagtaatcgatggattagatatcgattaaccgattgAATCAataggta atcagaccttcaaaaaatcttgagtatcgatcagcgatcgattatttcca agctaCACCCCCACCATGAATGGCCCTAAATCCGACatccctgcctaaat ccgacccctcAAATAattgctatgaaaaaaattctatgtttacaaaaatt tcctctccaagttgagcaataaactattgcaagaactttGGAAACAAAAC ATCTTACCAAAtaactataatgtcaagatgtcaattaatgtgatcaataa aatgtgagttgtaaaaataattacctctattattctgaatccattgctcg tgtttaaaacgtttaacaattttgtaatcaaaaattatgttttatgTTGA TCATTTGgtggttctattcccaggagaataatttaccgtcagccaaataa ggattatttttgtacctcTGCTGCTTAtctttcagcttgagtttatgttt AATGtcatggttttttgaagtgcttgattctaagagatgagcaaatatta ttatttttagtttttaagagaagcaaatttaatcttccTATTACAAGATT ACAAACATTACTACAAGATTGAACCATTTTTTAGATTCCATgaatgacca aaataaaaaagttttccgACCGacccaaaatctagggtcgggtgacaaCA AACCAAGAATTTTTAGAAGTCTAGCCTAAATTAGAAACTTTAAGTACATG ATCTGTTTTCTTTCAGTAGCAGTTTACTAGTGGATTAAAAAAATGGGAAA AGAAAAAGGAGGATTTCTGACTCCAAAAGCAATAGCAAATAGAATCAAAT CAAAAGGGTTGCAGAAGCTACGCTGGTATTGTCAGATGTGTCAAAAGCAA TGTCGTGACGAGGTACTTattcataaaatttattttcatacaTTTTAGAG GCTTGATgttataattattttaaaatattatatgaattatattattttta aaaaaggaaTGAAAACAGTCTGACTagtaattttaatattttgtcaACCC AAAAAAATCTAAGCATTTTGATTAGTTGAGAACATTGAAATAATTGTGAT ATTAGATATTAGATTTTTCACATATAAATATGAAAGCATTGACTCCATGT TGTCCTCAGTGtaagaatttataaaaaaacatctctGGAAACTACTTCGA AgtcttttgtttagttttggTAATTCCTCCTGagagtcaatttttttgtc agtttttctcaaaaagttcattcgaatcaggggggggggggcttgcagtt actccttgaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNccacccatgttgcagttagtccactgg tggagtaactgttttcccaaattttggtttatataccaccacggtagtaa ttgtcatagtgtttataactgcatgaccccccccctgttcgaatggtcaa aattcaaaaagagaaaataatgcAGGAGGGATGATggatataataaaaaa aaaaaaaaaaatgcattgaaaagattttttgggTCGACAATGAATGACAA CATGACAACAACATGACTTTGAGTGCAATATGAGAAATACTTTGCTTGGT CTAagattttataaatatttttacaatatttttaaatCTGGTATATATAT ATACGGagaataagaaaatttaaagtgaTTTTACCAACGAAGAGGAGAAA CTTtggattttttgtgaaaatctggtacgaCAGTCCTCAGCTTTAAAGAC CTAGATAGAAgggtgatgatgatgatgatgatgagtcCTCGTACCCATTG TGTTGTGACTGTTTTAGCCTCAGAAAAGTATTACAGAAAAATCTCAGaac ttgtaaaatatttctGGTATTGCATATAAGTCATGTGATACTAGTATATA CATGGTGGAATGATGGAGTGGAATCTTGATAATAATTTTATTTAACTTGT TTTAGAATGGATTCAAATGCCATTGTATGTCAGAAGCTCATCAAAGACAG TTGCTATTGTTTGCAGAAAACCCAAATAAATATCTAGATTCATTTTCACA GTGAGTATTAAAAAATAGccttataaattttgaaaaagtaacaAGTCCat agataaattttttttaagcctGACATATGCTGCATGAAATTGATTGCAAT TGAAGGATTGAAGTGTGCTATGAAAAGCAGCAGGGTGACTATTACGTACT AATGCTGCACTAGTAAAAGCGAAGTTGAAATGGTGGACTAAACTTGAGTT TGTATAAAGTCTGTTATAAAAACATCAACTGATCTTAAAGCTAACCATGT AGATTGTTTATAGAGGTTCTTTTCCCtcattataaaatataatctcTGAG TTACCTGTATGTTTTGGTGAGCTTGACTTGACTTCAACATCTTCAAAGTT GAAGTAGAATTTCATGTGCTTATAATATCTCTGCAATTCATTATTATTTT CAGGGACTTTTATGATGATTTCGTCAcattattgaaaagaagatttGGTA TGTATTCAAATCCCTTTTGCCGCAGATGGATTTCTAACTCAGCCAGGCTC TAAAATGGCATTTGGGCctcaattttcatttaaatttgaaaagagTGAAA TAAAATTCTAGTTACTGTAttaaaatctgtttttagtttCCTGGAGATTT GTGCTTGTATTACTTATTCCTATAATCAATATTTGTTGGGAATCTTCTCT GTGACTCTATGGAAATGGAAACACCCAAAGATATACAAAGTGGATATAAT GTGTATGTCTATTCTAAATTATAGGCACCAAACGTGTTCACTGCAACATT ATATATCAAGAATACGTTGCAGAGAGAGATCATACTCACATGAATGCTAC ACAATGGGAAACTTTGACAGAATTTGTAAAGTGGCTTGGTCGTGAGGGTC ATTGTACCGTAGATGAGACTCCTAAGGGATGGTTTGTCACTTATATTGAT AAAGATCCTGAAGTTATTGCTAGACAGAAGGTATTTTATTAATAAGAAAT ATCTactttgcttttttaaaccagaTTCATTGTCCTTTCAAATGGTGGAC TTGGATTATAGACAGATTATCAGAACAAAAAGCCTCAATGCCTGACTAAA ATCTAATTTTAATGCTAATTTGTAGGACATTTTACTTGTTATTGAAAATt gtgattttgatttcaaaccGTGCAGTCCAATCAAACCTATCATGTAACTC AAATCAGCTATTGAATTTCTCcctaaacaatttttttctttctaaggNCC AAAGCTATCATGTAACTCAAATCGGCTATTGAATTTCTCcctaaacaatt tttttctaaggGGTTCAAGATGtataagattttaaaagaatcattcctat ttcattggaaagaagaaagataaacttaaattttgatgtattaaATTCGA CTCATTAGATCAGAAGTTGtgctcaattgaatgaaaaagatattgtctga aagtgctcaaaaacgttaaaaaatttttgttttccagGCTGCACAATCAC AAGAGAGAAAAGAACTTGATGACCAAGAAAGAATGGGTATGAATACTTAT CCATGCCTCATTTGTATGACTAACTTTCTTCTTTACCTCCTTTGCCTGTG ACTTGAAGCTTTCAATCTCAAATCTTTGCTAGAAAAAGAACAAATTCATT GCATTGATATCAAAAGAATGCTAGTTattaaaatttaaacattaattTTC TGGCTGCCTTTCTTAAAGATGAATGAATAGTAAGGCAGAAAATCAATCAT ATTTTgttattaataaaaaaaaattatttcatccgttaaatttatttttc ttgacaGCAAAATTTATCGAGAAACAAGTTGAACGGGCCAAAGCAACTAC TGGTGACCAGGTATGGAAATAACGTTTCATAACAGTGAAAGTAGAGATTG TTAATTGATTATATCCTTGCAAAGTCACAAGGATATTGTTAGAGTATTGG GAAATAGTGTCTAGAATATTCCTCACATTTTATCAACTCTCGTCATTATT GTTTTGTCACATTATTATCAGCTTTGAGAGGTCTTGACCTTACGGtagat ataaaataaaaatcaattcaCCATGCTTTCCTTTACACCCAAACAATATT TCATATTGAAAATAAAGTTGGTATTGAGGTTTTTACTGTACAGTATGTCA GTTGACTCAAATTTAATTATAAACAATATTTCAGTTAATGTCATATATTA TTATTGActattgatttgttttttttaggaaGAGAGCAAATTTACAGAAT TACAAAGGGAAGATGAATCTGAGAAAGGTTGTAGTACttgatttttctca ttttttcttaAATCTTACACAAAATTAGCTTGGTTTTATTTTTGAGAACT TCTAAAAAAGTCAACTCTTAATATGGTACTTATAgtcgattttcattttt acattttacacaGAATTTGCTaggctttttcaaaatttcgtcaTTTTAGC GAacattttgtgttttttcaaCTCCAAAATATTGTGTTGGCTATCAATTT TCTCATTGAtctcttcaaatatttttctttttttatttagtcactttcga ttttggaaAACCAGGCTCTTCAAAAAGCAGCTCGTCTAAAACTAGTTCCT CTAAGACTAGCTCTTCATCTTTAGAAAAGTAAGTCCTGTTTTTGTATCTG TAGTGTTTTTTATGTaccaaaagacaaaagaaaattctCTCTACTTTTTC TCTGTGTGCATTTGTCTTTTTTCATTCTAATCTTTTCTTCCTGTCTAATC TTTTTGATGCTAAAACTTTATAATTACTTTAGAAAATCCATCTCAATAGC AGATAAAagtggaattttcaaaaattctgaaaaagaaaagtctTCAAAAG GGTAAGCTATTCTCATATATTCTATGTTTTCACTGTTAATTTCTTTGAGT TTTTTGATACCATTTGTGAGCTGTCTGTTTTATATGATATACAACAGGCT TTCCATACAATCGTTTTATAGAAAATCAAAGGAAACAACAAAACGAAAAT CAGCTTTGGATGAAATTCTTGAGGTAACTCAAATTTAAATGTCTGTCTAT CCAGGTCTATCTGTTTATTAAAGTTTTGGGAAACTTGTTATTTTATAGAC TTTGATTGACATTCTGGCACTTGTTAAAGCCAATCTATACATATATATGA AGCTGTTTgctgaccttgcaaaaactATGTGTGTCCACACACACGCTTAA AATTGTCCTTGTATTCTGCTCAATTTTAGGAAGAGAATgctttgaagaag aagaaactaAAGgaagtcaaaaaagaaaattggctGACAGAGGTTTCTAC ATGTCATACTTTTTGCAGCATAATTTTTAATTGTCAGATATAAAGTTGAC TATTATGTTGTGCTGGGCTAGTTGTCCTATGGTGTTGCTGACAAGTCTAA TATTTGTTTCTTTCAGGGTATTGTTGTGAAGATCATTACTAAAAAGCTTG GTGATAAATACTATAAACAAAAATGTGTTATAAAGGTAGACCTAATTTct cttgaaaaagaattttttgttcatCATGTACCAAAGTATACAACAGTGAC AAAAATCTATCCAAATTGTGATGTGCTTCctattgaaataatttttttta atgagtTACCACTTTCACTGACATTATATTTGTATCTTTTCAGGAAGTGA AAAACTTGTTTATTGCTGTAGTTGAGGTCTTGAATTCTGGAGATGTCATC AAACTTGATCAAATGCATTTAGAGACTGTCTTGCCAGGCCCAGGTTAAAA CTCTAATTTTTCTACAGATACTTTAATGAGATAAAGTTtcgtggggatta aatttcgcagatgGGTCTATCCACGAAATTCATACCCAAGTCTGTaaaat ctgcgaaattaaatccccacaaaagtttatcccattaaagtatatccCAT TAAAGACATTAAAGTATATTGCTCCTACCACTTATGAAACCTAAATAAAT TTATTGCTTTCTCATCCGAATTACATCTCTTTCTTATTTTATGTTGGAAA TTGGCTAGATTCTCTTTTAGCTGTGAATCAGTTTTAATTTTGTTTAGGTC GACCATTGAAAGTAGTGAATGGTGAACATAGAGGTTGTAATGCTGAAATG ATTGGCCTGAACCAAGGAAAATTTACTGCATCAGTCAAATTAACTTCAGT AAGTACATTTCAATCGCTCCCTTTATCCAGTCAGTGAATTTGCtttaaat aaaatgataaattacagggacctcaacttttgaaaaatcgTTTTCTTGTT CTTCCATATCCTAGTGTCTTTAGAAAAGCACTTCGGAGCAAAATTTTTAC ATACTTAACCCCTTTATAAGGTACTAATCACCAAAATTAGagcaaagaat tgaaaaatttttgaaaggcGGACACTTCAAACTAGCAGATACTAACCCTA TTCCCTGATGGTGTAATGTATTAATTCTTCTCTTAAGCCATATTTTGCCC CCTTTCTGATATTAATAGACTTGATTGGGCTTTTGTTCACAtcgaaaagt tttttatcatAAGAAATTGGCCTCTAAAGATTGATGGTTAAAAAGATTGG TTAAACAAATGCAACAAATCTGTTTATCAGTTCAAACAGATGGACACCTA AGAGAATAAGGTACTAAATGACTACAATATCAAGGCACAGTATCAATgaa gatgtttttgatgatgtGACCTTTACTCTTCTTTACTCAGGGTCCACAGA AAGGAATTACAGTAAAACTGCCATACGAAGAAATATGCAAAGTACCTTCA GGATCTTGAAGAAAAAGAATAACAATGTGCAGATGTCACAAAATGAAGCC ATGAGAGTATTCAAAATGCTGTGTAGGTCTGATCTGAATAACTTCAGTGC AAAGAGTAAATAATTTTATGGCATGGTCGATGAAAAGGATGTCATTGAAA TCCAATAAAAGTCTAATTCCTCCAAGAAGCACGAGTTTTCTACAACTTTC AAATGAAGatgcaaaattgtttttattgggaAAAGCAATCAATCTTTCAA AACGAATCAAATTCAAAACCATTCAGATTAgggttttcaatatttttatg cATATTGTATATATTTTAATTTCTAATTGGTGTTATAAAGTAAAGAAAGA CTTATGAGATGGTATGGGGATCTGAAACCCCTCACCGTTTGAAGAAAAGA GGTGGGGCATGTAGCAGATGAGTTGTGAACCTTATACTTTATCTCAGTCT ACAACAatgatgttttttaaatttcaaaattctttt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008009TCONS_00008009Clytia hemisphaericatranscript
TCONS_00008010TCONS_00008010Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008009-proteinTCONS_00008009-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000081supercontigsc0000081:574482..582667 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
KINDNA/RNA-binding protein KIN17 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
18.16 17.13 18.53 16.99 29.29 21.58 22.03 24.08 23.75 18.9 20.44 16.7 14.73 16.28 16.03 14.34 19.21 18.24 10.74 10.12 19.13 16.6 24.99 23.6 18.42 20.64 11.89 9.22 18.62 17.73