TCONS_00007991 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007991
Unique NameTCONS_00007991
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4170

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007991 ID=TCONS_00007991|Name=TCONS_00007991|organism=Clytia hemisphaerica|type=transcript|length=4170bp
tcttCTTGCATATTTATGAATTAAGAATTCAAAGTTATTTTATTTGAGAA
AATCTTATGTAAATAGACTACTTTGCCTGGTGAGAGATACTAATTAGTTT
AAACCTTTACCAAATTCTCAACAACACTGTGTTCCAGCTTCGTCACAGTT
TAGGAAATTAGATGTGAAGAATGTTATGCAAATTACAATTCTCAAACCTG
ACTGATAAATTTATCAGACTGATTTGAAATTATGCCTTCAAAGGGAGATT
AAAATGACATCTAAGGAATCGATCACAATCTGCAATTTGTACAATATTAA
AACACCCTGTGTCACAAACTCGGTGGTTCATACAATAAAAAATCCGTTAT
GACCACAACCAAATCCATATTAAACATGTTATTGGGTCCTACCGGTTATA
Taccttcctttaaaaatacgggttttttataagaataaactgtataagaa
cataaggtttctattgcaaaaatattaaaaataacgtattacattttaag
gttttacaGACTCTTAAACATCCGAATTTCTTAGGTATTTGCTGTATTTG
CCCCGTATTTACACAAGATAACAGAATTGGGAAAAACAAGAATACtcgaa
gaattttttttggaagttTCTGTAGTGAAGGGCTgtataaatttgaaata
agtcCTGGTTCGTTTTCAATAAGTCCTTCGTTTTATTTTCCCTATTCAAA
AACATAGAATTCGAAACAGATTTTTTATTAACAGACAGATACTAAACAAC
AACCCTAACAAAAACAATTCTATAGCCTTATAATGTTTACTTTATATTTT
GTCCGAAGTTTTAAGCCTTTAAAGCCTTAAACAAAGTTTTTCATCTTATT
TACTTATGAatgtaatattttttctttggtttaaagcgaatacacgtttt
tttataagaacaaactatatcagaacataaggcttcgatggccaaaatgt
aaCATGGCcatggtcaaaaatactcacaaaatagtccaaataagaacatg
ttaagaacatttttaggcttaaaactcaaaaagttaagaacatccgaagg
cttcataaattttggatgttcttataaaaaaacgtgtattgtttattttg
tttggCCTGTTTCAGAAAGTTACCATGACGACATTTCTGATAATTTGTTA
gttttttaaggctttatgatAATATGGGGGATTCCATAGTTTCTAAGGAC
GCGAACTGGGAACTAAGGCTGCTTAACATTCATTGGACGTTCATCCTAGA
CGATTTTAGAATACTTCGTATACTCTTAAACTAGAAGAACATCTTTCtta
cgtccatttaacgttattGCTTGGAAGACAATCATTTCAATGTCGAAAAT
CCAAAACTTCGTACCATAATCTTTGAACTAACTTTACGCAAGAAACATTT
TATTTGCCTTCgttgtttttaattttgcaatttttgcagGAGCAGGCTTT
TTCTCGTTAAATGGCGAAATTgtttaagaatttttcaaataaataaattt
tgattcaaaCATTTATGTCAAGGTGGATGGGGTaaatttatgataatttt
tGCGCTGGAATATTTCTCATTAAAATAAACTACAGTATTAGGTTAAACGC
ATGATAACATAATATAGCACCCGTACTTTTCACCTGTAAAGATCTTCACA
AAAATTGGGAGTTCTTCGATATTAGAACCATCTGAGAGACTTGTGAAAAA
ACGGGGAGATTTTTCATTATATTAGTTTGaactttttttccgaaattttg
aaatatagtTTGTTGGAATTTTGTCTGTCGGAAAATTATCATCAAAtggt
ttgtttattttatcaCCATGGCAACTAATCATTTTGGGATTCGGTATTTT
AGCGATATTAATTTTGAATCAATTTCCAACTAATTATTTTGGGAGTTTTA
TACAATATTCATTCATCTTTTTCAATAATTACCCCCCATTTGtctaaaat
ttattaaaattaccCCTGAAgtacaaaacaatttcaaagtCATTTGGCGA
GAACCTTCCTGAACTTTAGGCGCTCTCTGCACTTTCAACGCAAAACCTGC
ACTTCTATACGTCGAAAATTAGTTAAATTTTGCACTATAGAACAACTGGT
ACATCTAAACTTGTATAAATATCACACTAAATCAAGCACGACAACTTCAC
TATAATATTATCGCAACACATTTCAAGCATCTCTACCAAACATTCAAAGC
ATCAATTTTTACGGAGAATTTTTCTACATTTAATTGCATGATGTTTTCTT
GTTGTGGAAGTTCCAAGAGGAAAAGCGGGGTTCTGCCAAATAACGAGCCT
ACCGCCGTTACCAACAACAACGCTAACAACAACGTTATTAACGCCAAGAA
GCAACCTGTCAATCAAAATACATCATCGACAACAACATTAAAAATGGCTG
AATACCCAGATCTTTCCAAACACAACAACTGGATGTCCAGAGTCATGAAC
AAAGAATTGTTcgacaaaatgtcaaaattgaaaacaccAAATGGTGTCAC
TTTTGAACAAATCATTAAAACTGGTATTGCAAACCCAGGGCATCCTTTCA
TCGTAACCGTGGGTTGCGTTGCCGGTGATGAAGAATCGTATGAGACATTC
AAGGAATTTTTCGATCCCGTAATTGAAGGACGCCACAACGGATACAAACC
CGACGCTAAACACAAGACTGACTTGAACTTTGAAAATCTCAAAGGAGGTG
ATGATTTGGACCCCAATTTTGTTATTTCAAGCCGTGTCCGTACTGGAAGA
AGTATCCGTGGTTTGAACTTGCCACCTGTCTGTAACATTCAAGAAAGACG
AGATGTAGAAGAGATTGTCACCAAAGCTTTGGGAGCCCTTGGTGGTGACT
TTGCTGGAAAATACTACCCATTGACTGGTATGTCCGAAGAAGATCAAAAC
CAACTTATCGAAGACCATTTCTTATTCGATAAACCCGTTTCCCCTTTACT
CACTGCTTCTGGTATGGCACGTGACTGGCCCGATGCACGTGGTATCTGGC
ATAACAAAGACAAGAACTTCTTAGTGTGGGTCAACGAAGAAGATCATATC
CGAGTTATCTCCATGGAGAAGAGTGGAAACATGCGAGAAGTATTCAATCG
ATTCTGTAAAGGTTTAGCTATGTTTGAAGAACAAATGAAAGGAAATGGTC
ACTCCTTCATGTGGAATGAACATTTGGGTTTCGTTTTGACTTGTCCATCT
AATCTTGgAACTGGTATCAGAGCTGGAGTGCACGTCAAACTCCCACTTTT
GGCAAAACATTCCGAATTCGACAACATTCTCAAGAAACTCAGACTCCAAA
AGAGAGGAACCGGAGGTGTTGATACTGCAGCTGAAGGCGGTACTTTCGAT
ATCTCTAATGCTGATCGTTTGGGATTTTCCGAAGTCGCACTTGTCCAATT
AGTCGTGGATGGTGTCGGCCTTTTGGTCCGTATGGAGAAAGAATTGATGA
ACAAAGGGGATATCACTTCCTTGATCCCCAACTAAGAATCTTTCTCTCCA
CATGGTCCATTTAGAACCAGATTTAGTCATTTAGTGTATCAAATTTATAT
CATTCTTTCGCACACATTGTCGTATTAATTCCTTTATAATATTTAAATCa
tgtacacaatttttttttgtatatttttcaaaCATACCCACGCGTCAACT
TTTAGCCATAACCTGAAACCTTATAGAACAGAAATCTTGTAATAATTAGT
TTTCAGTGCTTCGATATCAGCCTTCAGCCCTTTGTTCATGCTTCAAAAGA
ACTTTTGGGAAGAAATATGATATTCTAAATGCCCTTGTTGAACTCAATTC
CTAATGTGCATCGGCCCCAAATTTGAAATGAGTATTTATCATAGATTTTT
CGTCCTTTTTTTGTCTTTTAATGCTTGGTTTGATAATTCAATTTGTAAAT
ATAATTGTAAAGTGATCGAATACAAAATCTATTTAATGTAAGAAAAGAAA
AGCACAGGAAAACTAATCTCAATGAAAAAGTCTCACTACTTTACCCACAC
CCTTATGAATCCATACCCTCCTTCTTGCCTCTTCCCTAATTTGAGCCCAT
ATGGCGGTTCAAGTTATTTATCGGAGGCATGGCGATCGCAACAGCTATAG
CCAAATGATTGGTTGGTCTGTTCGCCGTCCAACTATATATGTCACCCTAT
GAATAACCTTTAATtataat
Run BLAST on NCBI

transcript from alignment at sc0000081:304521..313679+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007991 ID=TCONS_00007991|Name=TCONS_00007991|organism=Clytia hemisphaerica|type=transcript|length=9159bp|location=Sequence derived from alignment at sc0000081:304521..313679+ (Clytia hemisphaerica)
tcttCTTGCATATTTATGAATTAAGAATTCAAAGTTATTTTATTTGAGAA
AATCTTATGTAAATAGACTACTTTGCCTGGTGAGAGATACTAATTAGTTT
AAACCTTTACCAAATTCTCAACAACACTGTGTTCCAGCTTCGTCACAGTT
TAGGAAATTAGATGTGAAGAATGTTATGCAAATTACAATTCTCAAACCTG
ACTGATAAATTTATCAGACTGATTTGAAATTATGCCTTCAAAGGGAGATT
AAAATGACATCTAAGGAATCGATCACAATCTGCAATTTGTACAATATTAA
AACACCCTGTGTCACAAACTCGGTGGTTCATACAATAAAAAATCCGTTAT
GACCACAACCAAATCCATATTAAACATGTTATTGGGTCCTACCGGTTATA
Taccttcctttaaaaatacgggttttttataagaataaactgtataagaa
cataaggtttctattgcaaaaatattaaaaataacgtattacattttaag
gttttacaGACTCTTAAACATCCGAATTTCTTAGGTATTTGCTGTATTTG
CCCCGTATTTACACAAGATAACAGAATTGGGAAAAACAAGAATACtcgaa
gaattttttttggaagttTCTGTAGTGAAGGGCTgtataaatttgaaata
agtcCTGGTTCGTTTTCAATAAGTCCTTCGTTTTATTTTCCCTATTCAAA
AACATAGAATTCGAAACAGATTTTTTATTAACAGACAGATACTAAACAAC
AACCCTAACAAAAACAATTCTATAGCCTTATAATGTTTACTTTATATTTT
GTCCGAAGTTTTAAGCCTTTAAAGCCTTAAACAAAGTTTTTCATCTTATT
TACTTATGAatgtaatattttttctttggtttaaagcgaatacacgtttt
tttataagaacaaactatatcagaacataaggcttcgatggccaaaatgt
aaCATGGCcatggtcaaaaatactcacaaaatagtccaaataagaacatg
ttaagaacatttttaggcttaaaactcaaaaagttaagaacatccgaagg
cttcataaattttggatgttcttataaaaaaacgtgtattgtttattttg
tttggCCTGTTTCAGAAAGTTACCATGACGACATTTCTGATAATTTGTTA
gttttttaaggctttatgatAATATGGGGGATTCCATAGTTTCTAAGGAC
GCGAACTGGGAACTAAGGCTGCTTAACATTCATTGGACGTTCATCCTAGA
CGATTTTAGAATACTTCGTATACTCTTAAACTAGAAGAACATCTTTCtta
cgtccatttaacgttattGCTTGGAAGACAATCATTTCAATGTCGAAAAT
CCAAAACTTCGTACCATAATCTTTGAACTAACTTTACGCAAGAAACATTT
TATTTGCCTTCgttgtttttaattttgcaatttttgcagGAGCAGGCTTT
TTCTCGTTAAATGGCGAAATTgtttaagaatttttcaaataaataaattt
tgattcaaaCATTTATGTCAAGGTGGATGGGGTaaatttatgataatttt
tGCGCTGGAATATTTCTCATTAAAATAAACTACAGTATTAGGTTAAACGC
ATGATAACATAATATAGCACCCGTACTTTTCACCTGTAAAGATCTTCACA
AAAATTGGGAGTTCTTCGATATTAGAACCATCTGAGAGACTTGTGAAAAA
ACGGGGAGATTTTTCATTATATTAGTTTGaactttttttccgaaattttg
aaatatagtTTGTTGGAATTTTGTCTGTCGGAAAATTATCATCAAAtggt
ttgtttattttatcaCCATGGCAACTAATCATTTTGGGATTCGGTATTTT
AGCGATATTAATTTTGAATCAATTTCCAACTAATTATTTTGGGAGTTTTA
TACAATATTCATTCATCTTTTTCAATAATTACCCCCCATTTGtctaaaat
ttattaaaattaccCCTGAAgtacaaaacaatttcaaagtCATTTGGCGA
GAACCTTCCTGAACTTTAGGCGCTCTCTGCACTTTCAACGCAAAACCTGC
ACTTCTATACGTCGAAAATTAGTTAAATTTTGCACTATAGAACAACTGGT
ACATCTAAACTTGTATAAATATCACACTAAATCAAGCACGACAACTTCAC
TATAATATTATCGCAACACATTTCAAGCATCTCTACCAAACATTCAAAGC
ATCAATTTTTACGGAGAATTTTTCTACATTTAATTGCATGATGTTTTCTT
GTTGTGGAAGTTCCAAGAGGAAAAGCGGGGTATATTCTTtttacatttat
ttatttacgtTCATACAGTTTAATTGAAACTATTTACTTTATTGTGGTTT
AACGGCGCGCTAGCCTTATACTTTAAAGCCTTGTCAATCCAAGGGcctga
gaaatattttacacgattttgtttataagaatgctgttcatttcatttca
tcatgcCTACCAGACTGGTATTCTTATGTTAGAATCTAAATCcaacttaa
atttggcatgTAATACCTTTCCGGGGCATGAAATGATGGTGCTATTCTta
gtatattcttaattttttgaccaattttatcATGAATAATATAAAGTtcc
aattttataaaaaaagcgcgTACTTATCTATAATTGAGAAATTcaactga
attttgaaaattatctcAATTTTCTAATTCTGATGGGGAATtaagtattt
caaaatttcacgagAAAATCCCATTCCCCCGTTTCCAAAGCCGAGATTTT
CCAGACCGTATTTAAGATATACTTTTGGGTTTGgattataaatattttct
tttaaatcaacTCTCNGCGCTTACTTATCTATAATTGAGAAATTCagctg
aattttgaaaattatctcAATTTTCTAATTCTGATGGGGAATTAAGTATT
TCAAAATCTCACGAGAAGATCCCATTCCCCCGTTTCCAAAGCCGAGATTT
TCCAGACCGTATTTAAGATATACTTTTGGGCTTTgattataaatattttc
ttttaaatcaacTCTCTAAAAATGGAAAGTTCAGATATGACCTTTGATAG
CCACTAAAAAAACATGGTCTCGATCATCAAAATACATTGAGTAGGAGCTT
GGCTAATCTTATCTTTTGACAAAGACAACACATCAACCTCAGAATAAGGG
CGTAGCTGGAATCGATGCTATTAAGAGGGATTTATATAAAAAGTTCTATC
TTTAACCAAATAACAAACGGGACTAGTTTATCTTTGTGGTGGTCTAGAAA
GGAATACAGTCACGCGAGGGAAATTCTTTTGGTTagataaaagaaatatt
tcaagtAATTTTAGTTACAATTTTTAGCATAGCATCGTCAGTGTGAGGAC
AGTTGGTCGTCGAGTCATCTAAAAGAGTATAACAAGGTGGAGTATCAAAT
AATTGGGTTGGGTCAAAGctattaccttatcggccttaattattagtcgg
ccctaagtttAGTCatctcgtcaaaatttagtcactaagggccgactcaT
AATTAAGACCGAATAAAAATTAGTGggttaaggaaagcttaattataaac
ttttagtttggcccaaatttttagtcggccctaactttagtcacctcgtc
aaaatttagtcacttagggtcGACTAAGTTCTGGCCGATTATACAATCTA
ACATATTGGTGGGTAATTAGTATTATTTGGTCTGTTATTCATGTTTCAGT
CTCAAGAATGTATTTTTCGCTCATCGTATCCTACAGTATATTTCATGCCC
TTAGGGTTCGGGGGTCTGACCAAAAAAGATTAAACAGTGAGATTAGTATT
tgcagtacacgtttttttataagaacatctagaATCTTTGAAGAGTTCGG
ATAtttcgagttttaagccttaaaaatgttcttaagatgttcttatttca
ccattttgtgaatatttttgtcatttttctaagaaaccggctgttttaga
gtcggcaaagccttaaaatgttcttaacttgctcttaacatttcGGTCAC
CgtagccttatgttcttatatagtttgttcttataaaaagcgtgtacgtA
CTAGAATAGATACTATTTTCGAAGAAAGTGTGGAAAGGAGTCCTTGTACT
GTCACGGAATTTTTAGAAACCTAAGTAATCGAAGATTCTCTGGACTCAGT
TCTTCAGTATAAAACcatgattttttattgaaatgccACCGCAGCAGACC
GATCAAATTAATTGTTAAAATGGCCTTAAAAAGTTATGCTGATAGCTGTA
ACTTTTGTTAGAATAATgtctatgaatttttgaaacgaattttcagttat
aatatCCTTAAGCATGCGTTTAGCTCCCTGCAGTGACAATAACCATATGT
GACTCTAATGAATCCTTCAATTTTTCTCTTAGAAGGTTCTGCCAAATAAC
GAGCCTACCGCCGTTACCAACAACAACGCTAACAACAACGTTATTAACGC
CAAGAAGCAACCTGTCAATCAAAATACATCATCGACAACAACATTAAAAA
TGGCTGAATACCCAGATCTTTCCAAACACAACAACTGGATGTCCAGAGTC
ATGAACAAAGAATTGTTcgacaaaatgtcaaaattgaaaacaccAAATGG
TGTCACTTTTGAACAAATCATTAAAACTGGTATTGCAAACCCAGGGCATC
CTTTCATCGTAACCGTGGGTTGCGTTGCCGGTGATGAAGAATCGTATGAG
ACATTCAAGGAATTTTTCGATCCCGTAATTGAAGGACGCCACAACGGTGA
GTCAAAAAAAGCTCATATATAAGATCATGTGAGCTCTGTTCACccgtata
tatatatatagtctagaagtataaaaccttcaactactcaaaatggaaac
aatatagacaaaaacccacaaaacaaaaagacaatacaaatacaacaaaa
atctagaatgaacattcacagaaaatcaatcaggttggagtagaaaagga
aaatatgatgaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtcct
cagttttcgacctacacaggatttcggccatttgtgaaaatatcctccta
tatgatggaaagatggaaatatatatataatagtTGTAGTGtcttttata
aatatttcaaatttagtGTTTTTACAGCGGCCGGTAGCACGATGCTAGCG
AGCCGGGCTCAAAATCACTAACATATTactttggtggttcgagccagTGT
CAAATCTGCAATTTTGAATAAAACTCTATGTCGCTGATCTAAGCATTTAG
CTACATGTGTTCAAAATACAAATTTCAGTTACACGAAAGATTTTCTGAAA
TGTTTACTTACCCTGATGCTAAAATAACAATATGGATAGAATCACAGTAA
AGTTTACTataatttgaataaatacaCTTGATCTACTCAGCTGTCAGAAT
CTTTCAAAGATTCGATGAAAATCCTTAAGATGGTCCTTGAGAGTATTATA
TAAGCGCTGCTAAGATAAAGTCTATATATCTTcattccaatctatgattt
gtagGATACAAACCCGACGCTAAACACAAGACTGACTTGAACTTTGAAAA
TCTCAAAGGAGGTGATGATTTGGACCCCAATTTTGTTATTTCAAGCCGTG
TCCGTACTGGAAGAAGTATCCGTGGTTTGAACTTGCCACCTGTCTGTAAC
ATTCAAGAAAGACGAGATGTAGAAGAGATTGTCACCAAAGCTTTGGGAGC
CCTTGGTGGTGACTTTGCTGGTAAGTGACGTGTTTTATACAAAAACAGTA
CCTTATTTCTGCTTAAACTATTATTCGCGAatccaaaatctaaaaatttc
gcaTGCACTAAatttaccctcttttttatccaaattctttcattttttta
ggttttttgaaaaaaaatttgatttaaaatttttctaataTTCGCGAAAA
CTAATCcgcgcgaaatttaatccacttgaCTTGAGGTAGAGAATGTGTCT
CTCTTACGTTACAAAGCTCGTACCCAGTTCCTTAATTCGCTTTTTTATGA
GTTTAGTATGTCAGCCTTTTCTAAAGAAATTCATAGTCGATGGATTTCTT
TTCCAGGAAAATACTACCCATTGACTGGTATGTCCGAAGAAGATCAAAAC
CAACTTATCGAAGACCATTTCTTATTCGATAAACCCGTTTCCCCTTTACT
CACTGCTTCTGGTATGGCACGTGACTGGCCCGATGCACGTGGTATCTGGC
ATAACAAAGACAAGAACTTCTTAGTGTGGGTCAACGAAGAAGATCATATC
CGAGTTATCTCCATGGAGAAGAGTGGAAACATGCGAGAAGTATTCAATCG
ATTCTGTAAAGGTTTAGCTATGTTTGAAGAACAAATGAAAGGAAATGGTC
ACTCCTTCATGTGGAATGAACATTTGGGTTTCGTTTTGACTTGTCCATCT
AATCTTGGTAAGTTTGACCACACTTTGGTCTATCCCatctgacacacaac
gttgtttcaaagtttatctaacgttcacaacgtccatatatcgttaaatg
aacgttgaaaaacgttgtgtgcctgctGGGATTTCCCTGACCCTCAAATA
AGCTATACACATTTTCTTTTGTAAGAACcaatacagttgatgctctctag
tTTGACATTCTACTATTCCATATCCAGCTGgcgcacaacgttgtttcaac
gttcatttaacgttatatggactttgtgaacattaaataaacgttgaaac
aactgtgccagctgggtatgcTTTATTTCTCAATAATGTTGAAAGTCTCC
GTCAACATAATCTCTCATAAGTGATGTTCTGCCATTCCATTCTCTCtagt
tttgaatttgtttttagaCTTCGGTCAAAATTGAGTGCGTTCTATTCTTA
TGAAAACCTTTAGTAAAGCTATTAAAATACCCTCAAATTTTTTTCGCGAC
TCTCTAAGTAATAAAGtatattcttttcttttcaggAACTGGTATCAGAG
CTGGAGTGCACGTCAAACTCCCACTTTTGGCAAAACATTCCGAATTCGAC
AACATTCTCAAGAAACTCAGACTCCAAAAGAGAGGTAAGTAGCTTTGTTA
AAGCCATAGCTGGAACAACCgatagttaaattccgctgtctCTTTCCAAA
TAGCATACAAAGCTTATTGTTTAAAAACAAACCTACAGTATCTATTCAAA
AATTCCTTAAGAGTAGAAATCTAATTGACGAACACTGCTCCAAGCTCCAA
GCTCCTCCACTCCTCCATTGAACCCATGTTCTTGGACTAAGGAACACGTC
AAAATGACTCATTTTCTGCGAATAGAGGATAATGTACCCATACCATACTA
TAATGAAGTATAGTACACTCTAATTCTACACATGTCAAATTTATAACGCA
TTCTAATCAAAAATTTACATATCTTTTACAGGAACCGGAGGTGTTGATAC
TGCAGCTGAAGGCGGTACTTTCGATATCTCTAATGCTGATCGTTTGGGAT
TTTCCGAAGTCGCACTTGTCCAATTAGTCGTGGATGGTGTCGGCCTTTTG
GTCCGTATGGAGAAAGAATTGATGAACAAAGGGGATATCACTTCCTTGAT
CCCCAACTAAGAATCTTTCTCTCCACATGGTCCATTTAGAACCAGATTTA
GTCATTTAGTGTATCAAATTTATATCATTCTTTCGCACACATTGTCGTAT
TAATTCCTTTATAATATTTAAATCatgtacacaatttttttttgtatatt
tttcaaaCATACCCACGCGTTAACTTTTAGCCATNTATCatgtacacaat
tttttttgtatatttttcaaaCATACCCACGCGTCAACTTTTAGCCATAA
CCTGAAACCTTATAGAACAGAAATCTTGTAATAATTAGTTTTCAGTGCTT
CGATATCAGCCTTCAGCCCTTTGTTCATGCTTCAAAAGAACTTTTGGGAA
GAAATATGATATTCTAAATGCCCTTGTTGAACTCAATTCCTAATGTGCAT
CGGCCCCAAATTTGAAATGAGTATTTATCATAGATTTTTCGTCCTTTTTT
TGTCTTTTAATGCTTGGTTTGATAATTCAATTTGTAAATATAATTGTAAA
GTGATCGAATACAAAATCTATTTAATGTAAGAAAAGAAAAGCACAGGAAA
ACTAATCTCAATGAAAAAGTCTCACTACTTTACCCACACCCTTATGAATC
CATACCCTCCTTCTTGCCTCTTCCCTAATTTGAGCCCATATGGCGGTTCA
AGTTATTTATCGGAGGCATGGCGATCGCAACAGCTATAGCCAAATGATTG
GTTGGTCTGTTCGCCGTCCAACTATATATGTCACCCTATGAATAACCTTT
AATtataat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004506XLOC_004506Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007991-exon-sc0000081-1491911889:304521..306799TCONS_00007991-exon-sc0000081-1491911889:304521..306799Clytia hemisphaericaexon
TCONS_00007991-exon-sc0000081-1510915933:304521..306799TCONS_00007991-exon-sc0000081-1510915933:304521..306799Clytia hemisphaericaexon
TCONS_00007991-exon-sc0000081-1575043694:304521..306799TCONS_00007991-exon-sc0000081-1575043694:304521..306799Clytia hemisphaericaexon
TCONS_00007991-exon-sc0000081-1491911889:308906..309266TCONS_00007991-exon-sc0000081-1491911889:308906..309266Clytia hemisphaericaexon
TCONS_00007991-exon-sc0000081-1510915933:308906..309266TCONS_00007991-exon-sc0000081-1510915933:308906..309266Clytia hemisphaericaexon
TCONS_00007991-exon-sc0000081-1575043694:308906..309266TCONS_00007991-exon-sc0000081-1575043694:308906..309266Clytia hemisphaericaexon
TCONS_00007991-exon-sc0000081-1491911889:310875..311090TCONS_00007991-exon-sc0000081-1491911889:310875..311090Clytia hemisphaericaexon
TCONS_00007991-exon-sc0000081-1510915933:310875..311090TCONS_00007991-exon-sc0000081-1510915933:310875..311090Clytia hemisphaericaexon
TCONS_00007991-exon-sc0000081-1575043694:310875..311090TCONS_00007991-exon-sc0000081-1575043694:310875..311090Clytia hemisphaericaexon
TCONS_00007991-exon-sc0000081-1491911889:311427..311777TCONS_00007991-exon-sc0000081-1491911889:311427..311777Clytia hemisphaericaexon
TCONS_00007991-exon-sc0000081-1510915933:311427..311777TCONS_00007991-exon-sc0000081-1510915933:311427..311777Clytia hemisphaericaexon
TCONS_00007991-exon-sc0000081-1575043694:311427..311777TCONS_00007991-exon-sc0000081-1575043694:311427..311777Clytia hemisphaericaexon
TCONS_00007991-exon-sc0000081-1491911889:312306..312404TCONS_00007991-exon-sc0000081-1491911889:312306..312404Clytia hemisphaericaexon
TCONS_00007991-exon-sc0000081-1510915933:312306..312404TCONS_00007991-exon-sc0000081-1510915933:312306..312404Clytia hemisphaericaexon
TCONS_00007991-exon-sc0000081-1575043694:312306..312404TCONS_00007991-exon-sc0000081-1575043694:312306..312404Clytia hemisphaericaexon
TCONS_00007991-exon-sc0000081-1491911889:312752..313078TCONS_00007991-exon-sc0000081-1491911889:312752..313078Clytia hemisphaericaexon
TCONS_00007991-exon-sc0000081-1510915933:312752..313078TCONS_00007991-exon-sc0000081-1510915933:312752..313078Clytia hemisphaericaexon
TCONS_00007991-exon-sc0000081-1575043694:312752..313078TCONS_00007991-exon-sc0000081-1575043694:312752..313078Clytia hemisphaericaexon
TCONS_00007991-exon-sc0000081-1491911889:313143..313679TCONS_00007991-exon-sc0000081-1491911889:313143..313679Clytia hemisphaericaexon
TCONS_00007991-exon-sc0000081-1510915933:313143..313679TCONS_00007991-exon-sc0000081-1510915933:313143..313679Clytia hemisphaericaexon
TCONS_00007991-exon-sc0000081-1575043694:313143..313679TCONS_00007991-exon-sc0000081-1575043694:313143..313679Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000081supercontigsc0000081:304521..313679 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0542453	0.01273	0.09047	0.112187	299.916	211.441	88.1442	100.14	120.972	116.47	116.475	141.168	1.3883	1.45006	0	0.0582255	0.041433	0	3.192	2.51345	0	0.244922	0	0	0	0	0.109892	0.0658026	0.0626123	0.0312405
Blast
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BLAST of TCONS_00007991 vs. Swiss-Prot (Human)
Match: KCRM (Creatine kinase M-type OS=Homo sapiens GN=CKM PE=1 SV=2)

HSP 1 Score: 513.457 bits (1321), Expect = 8.177e-169
Identity = 252/360 (70.00%), Postives = 293/360 (81.39%), Query Frame = 3 
Query: 2400 EYPDLSKHNNWMSRVMNKELFDKMSKLKTPNGVTFEQIIKTGIANPGHPFIVTVGCVAGDEESYETFKEFFDPVIEGRHNGYKPDAKHKTDLNFENLKGGDDLDPNFVISSRVRTGRSIRGLNLPPVCNIQERRDVEEIVTKALGALGGDFAGKYYPLTGMSEEDQNQLIEDHFLFDKPVSPLLTASGMARDWPDARGIWHNKDKNFLVWVNEEDHIRVISMEKSGNMREVFNRFCKGLAMFEEQMKGNGHSFMWNEHLGFVLTCPSNLGTGIRAGVHVKLPLLAKHSEFDNILKKLRLQKRGTGGVDTAAEGGTFDISNADRLGFSEXXXXXXXXXXXXXXXRMEKELMNKGDITSLIP 3479
            EYPDLSKHNN M++V+  EL+ K+   +TP+G T + +I+TG+ NPGHPFI+TVGCVAGDEESYE FKE FDP+I  RH GYKP  KHKTDLN ENLKGGDDLDPN+V+SSRVRTGRSI+G  LPP C+  ERR VE++  +AL +L G+F GKYYPL  M+E++Q QLI+DHFLFDKPVSPLL ASGMARDWPDARGIWHN +K+FLVWVNEEDH+RVISMEK GNM+EVF RFC GL   EE  K  GH FMWN+HLG+VLTCPSNLGTG+R GVHVKL  L+KH +F+ IL +LRLQKRGTGGVDTAA G  FD+SNADRLG SEV  VQLVVDGV L+V MEK+L     I  +IP
Sbjct:   19 EYPDLSKHNNHMAKVLTLELYKKLRDKETPSGFTVDDVIQTGVDNPGHPFIMTVGCVAGDEESYEVFKELFDPIISDRHGGYKPTDKHKTDLNHENLKGGDDLDPNYVLSSRVRTGRSIKGYTLPPHCSRGERRAVEKLSVEALNSLTGEFKGKYYPLKSMTEKEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKSFLVWVNEEDHLRVISMEKGGNMKEVFRRFCVGLQKIEEIFKKAGHPFMWNQHLGYVLTCPSNLGTGLRGGVHVKLAHLSKHPKFEEILTRLRLQKRGTGGVDTAAVGSVFDVSNADRLGSSEVEQVQLVVDGVKLMVEMEKKLEKGQSIDDMIP 378
The following BLAST results are available for this feature:
BLAST of TCONS_00007991 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KCRM8.177e-16970.00Creatine kinase M-type OS=Homo sapiens GN=CKM PE=1... [more]
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