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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007977 ID=TCONS_00007977|Name=TCONS_00007977|organism=Clytia hemisphaerica|type=transcript|length=1294bp
TAAAACTATAATGATTAATTAAAATGAGTTTTGATCGAGAGAGAGCTTAT
CTCTTAACTTGAGAGAGAAAAACTGTGAAATAATTGCTTGAACGAACGAA
AATCTTATGAATTCAATATTTCTGGCTGAAAACTCTCCTCGTTGAAATAT
ATTGGACGTGTTATAATTCATTAAAACCTCTTTTCGTAGGAAGGGAACAG
ATTGCTGGAAATTAATGAAATGTAAAAAGCCAATAGTTTGCTTCCAAATA
GACATCGGAAGAGAATTGGGATGGAGTATTTTTCCTGGCTTTCAGACTTT
GAAGTAACATTCTTGTTTTTGAAGTTATATGTTATGATAATATGATTGAT
AatacttttgatatttttccaCTTGATATTTATTGGTAACGTGACCAACA
CCTTATGAAAGTATCCATTTGGACAATAAAGAAATGCAGGATGGATCACA
TTTTTTGTAAACACTTTAGTTTGAACATTCCCACAGTATGATAGAAGATA
GAAACCTAAGAATGGACATCCCTGTATCAGTCACCCAGTGAAGGTTATTA
AGCAGATTGAAGTTTAATTGACCATTGGGGCTTGGGaaatggaaaataaa
agaaaatgggaaatgggaaatgaagccacttatttcccatggAAAAGCTA
gtattccaaaatattttaagacacccctgtgtcacagacccgctaggACC
CCCAGTCCCACTGAGTCCCACCGGAAAACTTcgcaaaaatatcgtccccg
cggtgggaaaataccccgaaatttcatccccactgggaaattgactttga
tttcatccccatttgaaattcaatgtttaaaaattgcactccaaacccat
caccactggattttttaaccttggaacaatagaatttctatccccattga
ggagtttttattcccactgaggaaaaaagttccaccggggctgtgagaca
ggggtgttttaaggGTCTGACCAAACGGGGTAAAAGCTCAGCAGTGTATG
TAGATCTCCTATGGAGATGAACAACATCAACAGATTTGCAATATTCCTTA
TTTTCAACtacgcctaagcaaaagcagaTTACCAAACCCTACTAGATGAC
CACGAGAAAGCCCCATCCAGTCTTTCAAGAAGCCTTAAGTGGATCCCGGA
CCAGGTTGTGTATCATGTTGAAGCATGATGGGCAGATGGATGGATAACAA
AGTGAGCGGTAATCAAAACTACTGAAAGGTGACATAAGGGCAAGGTTGTT
AAAGAAAACATCCAGAGAGAAataaatgtttcttttataagcat Run BLAST on NCBI transcript from alignment at sc0000080:557301..558594 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007977 ID=TCONS_00007977|Name=TCONS_00007977|organism=Clytia hemisphaerica|type=transcript|length=1294bp|location=Sequence derived from alignment at sc0000080:557301..558594 (Clytia hemisphaerica)
atgcttataaaagaaacatttatTTCTCTCTGGATGTTTTCTTTAACAAC
CTTGCCCTTATGTCACCTTTCAGTAGTTTTGATTACCGCTCACTTTGTTA
TCCATCCATCTGCCCATCATGCTTCAACATGATACACAACCTGGTCCGGG
ATCCACTTAAGGCTTCTTGAAAGACTGGATGGGGCTTTCTCGTGGTCATC
TAGTAGGGTTTGGTAAtctgcttttgcttaggcgtaGTTGAAAATAAGGA
ATATTGCAAATCTGTTGATGTTGTTCATCTCCATAGGAGATCTACATACA
CTGCTGAGCTTTTACCCCGTTTGGTCAGACccttaaaacacccctgtctc
acagccccggtggaacttttttcctcagtgggaataaaaactcctcaatg
gggatagaaattctattgttccaaggttaaaaaatccagtggtgatgggt
ttggagtgcaatttttaaacattgaatttcaaatggggatgaaatcaaag
tcaatttcccagtggggatgaaatttcggggtattttcccaccgcgggga
cgatatttttgcgAAGTTTTCCGGTGGGACTCAGTGGGACTGGGGGTcct
agcgggtctgtgacacaggggtgtcttaaaatattttggaatacTAGCTT
TTccatgggaaataagtggcttcatttcccatttcccattttcttttatt
ttccatttCCCAAGCCCCAATGGTCAATTAAACTTCAATCTGCTTAATAA
CCTTCACTGGGTGACTGATACAGGGATGTCCATTCTTAGGTTTCTATCTT
CTATCATACTGTGGGAATGTTCAAACTAAAGTGTTTACAAAAAATGTGAT
CCATCCTGCATTTCTTTATTGTCCAAATGGATACTTTCATAAGGTGTTGG
TCACGTTACCAATAAATATCAAGtggaaaaatatcaaaagtatTATCAAT
CATATTATCATAACATATAACTTCAAAAACAAGAATGTTACTTCAAAGTC
TGAAAGCCAGGAAAAATACTCCATCCCAATTCTCTTCCGATGTCTATTTG
GAAGCAAACTATTGGCTTTTTACATTTCATTAATTTCCAGCAATCTGTTC
CCTTCCTACGAAAAGAGGTTTTAATGAATTATAACACGTCCAATATATTT
CAACGAGGAGAGTTTTCAGCCAGAAATATTGAATTCATAAGATTTTCGTT
CGTTCAAGCAATTATTTCACAGTTTTTCTCTCTCAAGTTAAGAGATAAGC
TCTCTCTCGATCAAAACTCATTTTAATTAATCATTATAGTTTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007977-exon-sc0000080-1491911889:557301..558594 | TCONS_00007977-exon-sc0000080-1491911889:557301..558594 | Clytia hemisphaerica | exon |
| TCONS_00007977-exon-sc0000080-1510915933:557301..558594 | TCONS_00007977-exon-sc0000080-1510915933:557301..558594 | Clytia hemisphaerica | exon |
| TCONS_00007977-exon-sc0000080-1575043694:557301..558594 | TCONS_00007977-exon-sc0000080-1575043694:557301..558594 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000080 | supercontig | sc0000080:557301..558594 . |
Blast
The following BLAST results are available for this feature:
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