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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007779 ID=TCONS_00007779|Name=TCONS_00007779|organism=Clytia hemisphaerica|type=transcript|length=1542bp
AGATAATCGTTGCTTGGTCAACATAACACCAACTAAAGCGTCGTCGAAAA
GAATAACttgtattaaaaaaacatcATAAACTGTCTCGAGTCACTAACCG
ACAGTAGAAAAAAGATATTGCAAGAGCAAATTTCAGAACTACATACAGAT
AGAACCTAAAcgtgaacgaaaaaaaaaaaaaaaatacgacACAGGTCATT
GCAAAACAAGAGAGATATGCTTAACAATACAACCACTCAGTCGACTTCAA
TACCCAATCAACAACAAAATGATCATCAAATACACATAATCGATTACATT
ATCACCATCATTTATGTTTTTGTTCTCCTCATCGGGGTGATCGGCAATTT
AATGGTTTGTCTATACTTCCGGTTAGAAAACACACGACTGAAACACTTAC
AAACACTCATCTTTTACTTAGCTTTCTCGGATTTATGCGCCAGTTTTACA
AACCCAATTTTATTCATCTACCTACAATTGACACATAATAGGGAATGGCA
TTTCGGGATAATCGGATGTAAATTGTTTCCATTAACATGGCGTGTATTCT
CATCCATTTCCTGTGGCATCATTATGGTAATTAACATAGATCGCGGAATC
GCTTTAAAAATGCCGTTCAGGGACCCACCTAAGAAGAAACATGTACGATG
GCTCGTTGCTGGAATAGCTTTAATTGCAGTCTTAATGGAAACACCCTACC
TTGCATTTTCCGAGGTTGTTCCATATAAAGGAGCGTATGCATGCCGGGTG
CCAAGAGTGTCAGTTCCGGAATACGgttacccaaaattaatcatcagtCT
TTTCcgtgtttgtttatatttgagtGTGTTTATGGCGACTTCAATAATCA
TCCGACGCGAATTGTACGAAAAGGAGTCGTTGCAGAGTATGTTCCAGAAA
CAATTACGTCATCATGAGAATAATCACGTGATGAAGATGTTATTTATGGT
AGCATTGGTATTTATAGTGACTGTATTCCCAAGAGAGTTGTTTCATATAA
TCTATACTATAAGCTGGTTGATGCATAAGAATGCAGGGATTATGGTGAAC
CCAACGTTAGTCTATCTAAACTCGTTTTTTACTTGTTTGCTGTGTTCCAA
TACGTTTTGCAACGTGCTGATCTACGCTAAGTTACACCACAAGTTCCGGA
AAACTGTATTATCATCATTCACTACCTCATTTGGTATGTCAAGGAACAAT
AATTGTGAGATATCAAATAAGCGTTCCAAAATGTTATGCtggaaagagga
aaagaacGTAACAAATGTTTAAAAGACCACGTTCAAACACTACGGtttcg
tttcgctccgaaaTGAAATgtagccattctattggttacatttgagtttt
acgtcacttctaaccaatagaatggcttcatttagTTAAGGGGTAGATGG
GAACATGGTCATTGAATCTTACCTTCCTCTGTGGGTCagggccggtctcc
actttcgcgcaaaattagcgaaaattttgtaaggtcattggtcggttgaa
aaataaagcaattccattggtcaaaattgacgtaactttttt Run BLAST on NCBI protein sequence of TCONS_00007779-protein >TCONS_00007779-protein ID=TCONS_00007779-protein|Name=TCONS_00007779-protein|organism=Clytia hemisphaerica|type=polypeptide|length=351bp
MLNNTTTQSTSIPNQQQNDHQIHIIDYIITIIYVFVLLIGVIGNLMVCLY
FRLENTRLKHLQTLIFYLAFSDLCASFTNPILFIYLQLTHNREWHFGIIG
CKLFPLTWRVFSSISCGIIMVINIDRGIALKMPFRDPPKKKHVRWLVAGI
ALIAVLMETPYLAFSEVVPYKGAYACRVPRVSVPEYGYPKLIISLFRVCL
YLSVFMATSIIIRRELYEKESLQSMFQKQLRHHENNHVMKMLFMVALVFI
VTVFPRELFHIIYTISWLMHKNAGIMVNPTLVYLNSFFTCLLCSNTFCNV
LIYAKLHHKFRKTVLSSFTTSFGMSRNNNCEISNKRSKMLCWKEEKNVTN
V Run BLAST on NCBI transcript from alignment at sc0000079:697817..699358 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007779 ID=TCONS_00007779|Name=TCONS_00007779|organism=Clytia hemisphaerica|type=transcript|length=1542bp|location=Sequence derived from alignment at sc0000079:697817..699358 (Clytia hemisphaerica)
aaaaaagttacgtcaattttgaccaatggaattgctttatttttcaaccg
accaatgaccttacaaaattttcgctaattttgcgcgaaagtggagaccg
gccctGACCCACAGAGGAAGGTAAGATTCAATGACCATGTTCCCATCTAC
CCCTTAActaaatgaagccattctattggttagaagtgacgtaaaactca
aatgtaaccaatagaatggctacATTTCAtttcggagcgaaacgaaaCCG
TAGTGTTTGAACGTGGTCTTTTAAACATTTGTTACgttcttttcctcttt
ccaGCATAACATTTTGGAACGCTTATTTGATATCTCACAATTATTGTTCC
TTGACATACCAAATGAGGTAGTGAATGATGATAATACAGTTTTCCGGAAC
TTGTGGTGTAACTTAGCGTAGATCAGCACGTTGCAAAACGTATTGGAACA
CAGCAAACAAGTAAAAAACGAGTTTAGATAGACTAACGTTGGGTTCACCA
TAATCCCTGCATTCTTATGCATCAACCAGCTTATAGTATAGATTATATGA
AACAACTCTCTTGGGAATACAGTCACTATAAATACCAATGCTACCATAAA
TAACATCTTCATCACGTGATTATTCTCATGATGACGTAATTGTTTCTGGA
ACATACTCTGCAACGACTCCTTTTCGTACAATTCGCGTCGGATGATTATT
GAAGTCGCCATAAACACactcaaatataaacaaacacgGAAAAGactgat
gattaattttgggtaacCGTATTCCGGAACTGACACTCTTGGCACCCGGC
ATGCATACGCTCCTTTATATGGAACAACCTCGGAAAATGCAAGGTAGGGT
GTTTCCATTAAGACTGCAATTAAAGCTATTCCAGCAACGAGCCATCGTAC
ATGTTTCTTCTTAGGTGGGTCCCTGAACGGCATTTTTAAAGCGATTCCGC
GATCTATGTTAATTACCATAATGATGCCACAGGAAATGGATGAGAATACA
CGCCATGTTAATGGAAACAATTTACATCCGATTATCCCGAAATGCCATTC
CCTATTATGTGTCAATTGTAGGTAGATGAATAAAATTGGGTTTGTAAAAC
TGGCGCATAAATCCGAGAAAGCTAAGTAAAAGATGAGTGTTTGTAAGTGT
TTCAGTCGTGTGTTTTCTAACCGGAAGTATAGACAAACCATTAAATTGCC
GATCACCCCGATGAGGAGAACAAAAACATAAATGATGGTGATAATGTAAT
CGATTATGTGTATTTGATGATCATTTTGTTGTTGATTGGGTATTGAAGTC
GACTGAGTGGTTGTATTGTTAAGCATATCTCTCTTGTTTTGCAATGACCT
GTgtcgtattttttttttttttttcgttcacgTTTAGGTTCTATCTGTAT
GTAGTTCTGAAATTTGCTCTTGCAATATCTTTTTTCTACTGTCGGTTAGT
GACTCGAGACAGTTTATgatgtttttttaatacaaGTTATTCTTTTCGAC
GACGCTTTAGTTGGTGTTATGTTGACCAAGCAACGATTATCT Coding sequence (CDS) from alignment at sc0000079:697817..699358 >TCONS_00007779 ID=TCONS_00007779|Name=TCONS_00007779|organism=Clytia hemisphaerica|type=CDS|length=1056bp|location=Sequence derived from alignment at sc0000079:697817..699358 (Clytia hemisphaerica)
TTAAACATTTGTTACgttcttttcctctttccaGCATAACATTTTGGAAC
GCTTATTTGATATCTCACAATTATTGTTCCTTGACATACCAAATGAGGTA
GTGAATGATGATAATACAGTTTTCCGGAACTTGTGGTGTAACTTAGCGTA
GATCAGCACGTTGCAAAACGTATTGGAACACAGCAAACAAGTAAAAAACG
AGTTTAGATAGACTAACGTTGGGTTCACCATAATCCCTGCATTCTTATGC
ATCAACCAGCTTATAGTATAGATTATATGAAACAACTCTCTTGGGAATAC
AGTCACTATAAATACCAATGCTACCATAAATAACATCTTCATCACGTGAT
TATTCTCATGATGACGTAATTGTTTCTGGAACATACTCTGCAACGACTCC
TTTTCGTACAATTCGCGTCGGATGATTATTGAAGTCGCCATAAACACact
caaatataaacaaacacgGAAAAGactgatgattaattttgggtaacCGT
ATTCCGGAACTGACACTCTTGGCACCCGGCATGCATACGCTCCTTTATAT
GGAACAACCTCGGAAAATGCAAGGTAGGGTGTTTCCATTAAGACTGCAAT
TAAAGCTATTCCAGCAACGAGCCATCGTACATGTTTCTTCTTAGGTGGGT
CCCTGAACGGCATTTTTAAAGCGATTCCGCGATCTATGTTAATTACCATA
ATGATGCCACAGGAAATGGATGAGAATACACGCCATGTTAATGGAAACAA
TTTACATCCGATTATCCCGAAATGCCATTCCCTATTATGTGTCAATTGTA
GGTAGATGAATAAAATTGGGTTTGTAAAACTGGCGCATAAATCCGAGAAA
GCTAAGTAAAAGATGAGTGTTTGTAAGTGTTTCAGTCGTGTGTTTTCTAA
CCGGAAGTATAGACAAACCATTAAATTGCCGATCACCCCGATGAGGAGAA
CAAAAACATAAATGATGGTGATAATGTAATCGATTATGTGTATTTGATGA
TCATTTTGTTGTTGATTGGGTATTGAAGTCGACTGAGTGGTTGTATTGTT
AAGCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007779-exon-sc0000079-1491911889:697817..699358 | TCONS_00007779-exon-sc0000079-1491911889:697817..699358 | Clytia hemisphaerica | exon |
| TCONS_00007779-exon-sc0000079-1510915933:697817..699358 | TCONS_00007779-exon-sc0000079-1510915933:697817..699358 | Clytia hemisphaerica | exon |
| TCONS_00007779-exon-sc0000079-1575043694:697817..699358 | TCONS_00007779-exon-sc0000079-1575043694:697817..699358 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000079 | supercontig | sc0000079:697817..699358 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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