TCONS_00007707 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007707
Unique NameTCONS_00007707
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length611

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007707 ID=TCONS_00007707|Name=TCONS_00007707|organism=Clytia hemisphaerica|type=transcript|length=611bp
TTTCAGATAGACCGCTTTAGTAGGAAACTAGACAAAACTAGACGGATTCC
AAAAGGGAAAATTTATttacgttttatttttacagacaCGTAACAATATA
GCGACGACCATCTTCAAAATGGAAAATCTTGTTTTGACCTGTCTTGTGGC
AATAGTTTTGATGGCTAATGTTAGCAGTACagTTGCAGCTGAATCATGCG
AGGATAGAATAGGAACTCCCATGTGCAAGAAACTTAAGGAACTTCTTCCC
CCGGCCGTCAAGAAGATTGTTTGCAGAAAGACCTGTGGATTTTGTTCTCA
AGATGAAACGGCTTCAGATGTAGTGTCACGTGACAAAAGAGGCGCATGCG
TCAACAAGACTACTTATTGCCAATTTCACGGCACATGGTTGGCTTGCAAG
ATTAATGTATGGGTCCGAGCAAACTGTCAAAAGCACTGCAAACTATGCTA
Ggcgaaatatcaaaataaatttttattgcaatgaattatctttgatgaaa
atttcattttcaagaaaagaTTTTGATAATGCCGAATCCGCAAAACATTG
AACATACctgcaaaagtttttttatttggaGAGCTGGTATAATGAAAATA
TACACAGAAAG
Run BLAST on NCBI

protein sequence of TCONS_00007707-protein

>TCONS_00007707-protein ID=TCONS_00007707-protein|Name=TCONS_00007707-protein|organism=Clytia hemisphaerica|type=polypeptide|length=110bp
MENLVLTCLVAIVLMANVSSTVAAESCEDRIGTPMCKKLKELLPPAVKKI
VCRKTCGFCSQDETASDVVSRDKRGACVNKTTYCQFHGTWLACKINVWVR
ANCQKHCKLC
Run BLAST on NCBI

transcript from alignment at sc0000079:211790..226230+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007707 ID=TCONS_00007707|Name=TCONS_00007707|organism=Clytia hemisphaerica|type=transcript|length=14441bp|location=Sequence derived from alignment at sc0000079:211790..226230+ (Clytia hemisphaerica)
TTTCAGATAGACCGCTTTAGTAGGAAACTAGACAAAACTAGACGGATTCC AAAAGGGAAAATTTATttacgttttatttttacagacaCGTAACAATATA GCGACGACCATCTTCAAAATGGAAAATCTTGTTTTGACCTGTCTTGTGGC AATAGTTTTGATGGCTAATGTTAGCAGTACaggtaaaaataatttattat tttcttttaccCATTAGCTTTTGACTATGTTGCCAAAGCCTGTGAATATT TCTTTAAACTGGAGATAAAGGCTATTTAAGCCTTGATTTATCTCTCATTA AACACATCTATAGCAGCAAACTTCGAAAACAATAAAACACCAGAAGCCCC CGCTTTGTagtaattttcaaaacaagaaaattgggAGACAGTTGCTTTAT ACTCTTATATGATAGTGAGATGGTTGATTGTGCTCGTTTTACctatgaaa tttatttgaagCGAAGCTTAGATTTAACTCGTCACGTTATCATACACTTT CTTCGTCTCTCGATATGATTAAACTATACATATTGGTCTCGCTAGCCTAA AAgataattttcaagaaattttcaaagtttttaaaaatgttaataAAGTA GTTTACTGAACTTTCATCACAAACGATTTCCTTGTTTAAACATCAATCTG AGTGAGACAAACGACATCCTTATGTCTTTTTAATTTATCATTATCGCGTC ATTTTGTTGGCGTGGCTAGCCACATTAATACTCCATAAGAAGGAAAGCCC ATCCTTCATGCTATTTTAAATAACCGCAATTATTTTTCTCAGTTTTCTAT TAGTTTTGGCGTTTCAGTCATCCTTGAAAGATGGTGGCAATTAAAGTTTT AAATATCTTCCTCTATTCTTCCGTGTAGGCTAAACTTCGCATTTCCTCAA TAATTTTTGACTACATTTTATCAGAAAAGAGACAAATCGCTGCTATTTAT AGATTTTCGTTAAAAAATACAACCAATTATTTAGTTTTTACAATctggaa aaatttttgtaaCAATCTCTCAAGGTCGTCTTTGCACCAAAATCTGTCTC TCTCGGGACCAGGATTCGAAGGTCAATTTCGCACGAATCCACTTCCACTT CTATAGTACTCCCCCTCCCAGAGCTCTGATTTTTTTGCTGGCTTTACCTA ATTTTCGAAGTTTAGGACTCAACCATAGTGGACCATGAGAGCTATTTAAT TTGGGGTAGAATTACCCAGGCAACTTTATATCGTGAAAACTTTTGATATC GTGAAAACTTTTGATATTGGGATTTTCATAGATCTAATGAAAGTTTAGGT TATCCACGATCGAAACGATGACACTGCTCCTGTTTACTCAATTACTCAAT TTAAAATTAGTATTTAACTATTCTTGATAATTGAAGGTCTAAAGATTAAG TATTTCCTTTAGTCTTCCGTGTAGGCTGAATCTTAGATTTCCTCGAGTAA TTATCCACTTTCAATAGCTTTTCGTGACTTCCAAAACTTCTAGAGTCGGA TATCATTAGGTCATAAATAGCCTACCTTGGAACCTACTCAGAATAAATTC TGGCAAAAACGATATCCTTAGCGACAGGAACGCCTTTTGGCtgacttttg tgattttctgaAACATTTTGGTGTCTGCATCgcgatttctttcatttttt acttctGAATTTGAGATTcaatatgataaaatgatatccTTGCGAGACTC ATGATGAGCTTGtctatttgattgttttttgagGTTACTTTTGGAACTTT TTCAGCACGTGTAATTTAGAGTAGGCAAAAACACTTTTGtatggtctgta aattacacgtactgaaaaagttccaaaaataaCCTCAAAAGAAATAAACG GGGGAGAGGTCTGAATAAACAGGGGTTGAAAACTTCTAATCGTTTAAACC TTTAAAGAGTATTCGAACATTACAAAGAAATaaaggggggtttgtacttt taaggtgtgacgggattgacgcttttttagtacggtattacgggatatga cgaaaaaagagacgggaaaacggtattttaaaatcagacggtgacggtat ttaggtacatttttgccctgtacaagccggtgtgacggtgttattatNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNcggtgacggtatttaggtacatttttgccctgtacaagccggtgt gacggtgttattattttttcaattttcgggattccgggattcagcaaaga ttttgacggaaaaacggtatttcgaacccctacaaacctcCCCCGAATAA AGACTGATTTACACTTCAACTCAAAAACAGAAAACTAGAAAATCtataaa cggggggtcctaataagaacggggggggggtccgaaaatttttccaaaat tgataACCACGAGGAcgtttattcgggaccttagagtaatcGATGccagt tttttttaagaattgagAACTGTTGAATAATATTGAACGATAGagttttt tatagaattttaaAGTGTGTGAGTACCAACTAAAAATGTGATAAACGTTA TCACTCTCAAggctcaaaattttcatttttataaatatGATATGGGGAGG GAGAGCTGACCCTTAAtataaacatgaaaaatatgagcaatctgattggt acataaatgctgtatttcatattgtaccgtacaaatacaagaccgcgttc aaaaaagggtctggtaagcgagagatcATAATTTGTACTTACTTTTGTAC CCAGGGgggagtacttaggcaaatggagggtacggtatgtgctgccctta agggtaccttttttggacttccaaactCCCGCTATTggtcagaaaaatca gaaaatcaaatttcagtcccactaaagggtcggaaaaataggaaaatttc aacttttaccccttgaaagatcgaaatttggtcaaaactcgtcaaatttg tcccgttaagggtcgtaaaattaacaaaattttcctttgttttctccttt ttagttagtttaggtataaacttatttctttttttatgatttttgttggc gaatACCTAAACTACTTTTTAGTCCCGGtgagggtccaaagttcgaaagt cgggtggacccccccccccgtcagctcgcaaccccagtcccccccccccc cccccagaccccccccccccccggcagctcgcaaccctagtccccccccc ccccgggcttttgTATCTTATATCCCGAAATTTATTCTCaggaatgtttt cttttttctctcaaTGCACATACAAAACAGACACAACTTGTCAAAAGaat gttttgacattttaaacacccctttctcacagacccattggGACCTCTTC CTACTAAAGAaactggccaaaatatcgttcccagcgaaaaattatactcc aatttttgcccccaatgaaaataatcagaaagaaaatcctcactgcaaaa tactgtgctatttttccatccctactgaattttccggcttgaaaacaatt gaaatcaaatccccagccataaaggacataggaatatcaatccccatcga ggtttggtccgttatttttacccctagCGGCTGAAAAAAACCCactggat ctgtgagaagggggtgtttctAATGATCATTCGAATCATTTTCGAAgagt cgaatgtttttatgttcatttcaccaaaatacagaaagtgaaaaaaaaac aaagaagagaCGCCAATGGAGAgagaaaagtttgttgatatttttcaagt tgatgataaaccagttatcacactttACTCCTACAATATTggaggctcgg aaaatattacaaaaaccctgaattcgaaaaatatatcccatattaTACTC TGTACCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN cgaaatttggaaaaaatggaccaaaatttaggaaaaagtctctcaaaggg tcgattttcgattttcggctcggacatacccgtcacctcgcaaacctatt accccccctcccccgggacTCTGTACTATTACTTaaccttaagggctctg accatagtgaatttttcataattgtcgtgtataaaatgtattttctgact gatgtaaccaacaaaactatggcatgttatacatttttcgttaggcaaac tattcctgaatctggaaaatttaaaaatcgtaatgaaaaaatttgatgaa gaagaaaatgaagacattttgAGAAGATAAGTGTTTCAACTTTgaggagc ttattttcggcgaagaaaaaagattttgaaaaaatctttgcaCTAGATGT TGTATCTTTAATCAAACTAAAAATGAATTtacggaaaatttttgtaaaag cttctttgtctcaaaatcttgaaaatagtggcttttgaccaattttccat cccaattttttgtacaaaaagagtcataacttttgaaaatcaatttagaa aattttttcgaaaatctttagatagttcaatcttttgcagacaattcaaa aaatttcgaaacaaaaaggttaattacccattaaaacttagcacttttta ttttttattatttaaattttattatCGTCTTTTTAAGGTTCATGGCGtca ttttttgtaattaaattgctaattactcttgatagaataaGTTCAGAAAC AACtttaaagacaattttttgttaaatgtgtcaaggaaatcaaaaaaaaa gttttatcttcaaaccTCGTAACAGatcttttgactatggtcagaccCCT TAAGATTTTCCTTAAACAACAATATAAAGAATTTTTACCCAAAAAGATTG CATACATTCAagatgtttttatttatttatcttttCCAAGTGTAAACAAA AGTATGATCGTATGataaattacaaaattattttcctgGGAACCATTCTC AGTGGTTCTATAGAACAACAACAGGTCAACCTTCGGTAGTTGGATTATCA GTCAATGTATAAAAAGAGTTGGTGGGACCACGCAATTAAGAGCGATACGA ATACTCCAACATTTTATCGATGGTATCAATTCAAGTGTTTTCAACTTCAA ACCAATCTTTCTTGAAAGAATAATCGATTCTCATTTTATCTGGTGATGGA ATTGCAAAAGGCTGCGTCAAAGTTCTTTGCTTTTTCCAAGATTCCCTTGA AATCCTTGAAGTTCATCGTCTTTTTAAGTCTCATTCAATTTATCTTTTCC GATTCAGCACCTTTGCTGCTTGTAAAATATCGAAATAATAAAGCATAGAT TCCAAATCTCTTTTACGTCTTCTACCTCCCCAATACATAACACTTCCATG GTCAGGTTGGCAGATTTTGgtattttgggtaaatttggaGCACCCAAGAA CTATTTCACCACATTTATGACAATCTGATGCAGCATTGCAAGGCTTGAAA TATTCACAGTCATCGCCTTGGCAAACATTGATCTGTACAACAATCAATAA GAAGACGACAATGACTGGCAATCTCATTGTTTTCACCAGTTGGTTCATTG TATTTCTATAAAAGTAGACTTGTGTCCAGTGTTTTCGACTACAAATCTTT AAATTGTagcttttcaaattttaaaagctgTGTCCTTCACTAACTTGTTC CTTTAActgtttcagtttcagtttttgTTCATTATAAATATACGTTTACC GGAACTCCATTATACATTTTGACTATCatttaaaagtatatttttgCTTA ATCTATCTTCTATTTAATTACTTGTACTTCCCTGTGCCTCTGCTTATTAA GCTGCCATGTGCTCTTTTTTATTAGCATTAGTAGATAGATTTTACTTAAC CTCGCATTGGCGATtcttattttcttgaaattgaaatCAGCATTCCTTAT CACTTTCTGTATTATGAGGCGCATACTGTTCTTCATTTGATCTTAATTTC GTCCAAATTTCAGCCTTGTTTTTTTAAGATTCTTCAAATAAAAGCTTGTA GTCTAACCACCTGCTCGCTCAATTTTATGACGAGTAATTAAGCTGAAATT TGTATATTATGGAAAGTGTGGGAGTGTTGATTAAAGGAAAAGCATTGCAA TGGAATGGAATATCATTAATCTTGTCAACATAGCTGAATGTTTTTTAATT AGGTGAGGCCAATTTAATtcgttgttttacgggccaagctaccctaAAAA GAGGGTCAGTTGGTCtgcgaaaaaaatgaaaataaaaatcgaaTTTCACT TATAAAAACTCCTAAAAAGGCATTAAATACTAcaacatcttgacaaaaat gcgaaatagaaaggcacaaaaaggtcgaattcgtggataaaaagaaaaat ttaacacAAAATTCTCAAACATTtggaaaaattaccaaaaattttgattt gggATTCTGTAGAgcgatgaaaataaaaatgaattgccaaaatgaatttt atttttatttcaatttttggaattttagggTCGGTTGGGACCGTAAAGCA ACTTATCAAAATTGCTCTTGTCTTAGAATTCGGAAGCTAATATAGATAAT TTGAGAAGTCTTTTTATCCTTAATTAAGTCTTTTGTTcctaaaatattgt tttttcttgcgTTTTAAGCCTCAGAGGGAGTGTAATCTCCAAAAGGAGAC AAAATTTATAGAGACCATATAAGAACGAAGAAAAAACGAGAAACGAACGA CAAATAACGTTTAAAACGACattaaagaacgacatatttagCCATCCCAA CGCTTGACCTTACAAGTGACACCACCCCTACGTATTCgtcaatgttttat tttatataaaaatagtGTAGTTCTGGATGATCCATCCAGACCCATTGAAG TATCGCAATTAATCGTATCCAGATAAATGGACAGGACTTTGAGTAGACAG TTcctaaaactaaaatttcctAACCAGGACCTTCgccatttttctataag aaccaGTGGATTTTTGATAGGGCTTAGCTGTtgttattttttggcacttt gagcctcagcTTGCTCTTGtcttgttcttatttatagggtgagATGTGTT TTAAGATTTATACCCAATGTTTACTACATTGACCCTTAAATCGATTAAAA TTGACTAATtctacccagctgacacacaacgttgtttcaacgttcattta acgttatatggacgttgtgaacgttatttaaacgttgaaacaacgttgtG TGCCAGCTGGGTAGGCTCATCTGTTCTTAAATCGTTTTCATTTTGGGCGA TTTTGAGTCTCCTTATTCCTTTAAAATTGTTCTTGTAAAATAAAAGTAGT ATTCCAGAAATGAATTTAGAGGTACCCGCTTGGGATTTCGTTTAAATTTT AGAGACCTCCCTTTAAACTATTTTAAAAAATGTTAATGGCTGCCCAGGAT TGTTCAGGTGTTTTGAGGGAAGATACTCTGAGGTAGACTTTCGCTAACCC TCAATTCTAACGAAAAACTTTTTAGATTATATGCATAGAGGCCTCTGAAT CTATGTATGTCGTAAACAAGGTTACCAAAAAGAACTATACTGAGTTgaat taatttattttaaaatattttctgattcttttcttatatttctttaaaat ctcaaaattttcagGAATACCGTTAAACAGTTCATAAAGCTAAGCTAGAC ACGATAATTGTTTAAAATAGTCACATAACAAAACAATCGGCAAATATGGA GTCCGCCTGGCCTTTTACCTTACATGTACTGTATACAATTATATtatatt cattttcaatgaaaaattacatTTAGGAATATTCGTCAGTAACGAGACAG AAGTTTTTAGTTGATATTTCACCGCGAAAGCACGTGTGAATGGCTCTTGC ATAATAAGTTCCAAGTTTCGAGATCTCCGTGAACCTACTTCTGGGTAATT CGAAAGTTGTTCTTTGTGTAAATATCATTTCAGATAACTTCTCTTCGTCT TCCCATTTGAGCACCCCTCTCGATACCACCAGTTGTTACATACGAACGGT ATATATTTCTAGCTGCACATTGATACTCATCTGGTTATGGAGTACTGATT TCATTCTGCAGGCTTTGTTAATGTTTTTCAGTACTACCATAAGCATCGTC AAATGGAATCCCCGTCATCGTTACAATATGTGTTTGTAAGTTCGTCAATC CTGCAGGCCAGTTGTTTTTAATTAAGTATTCTGGTAACTTCACTTGATAt tttggtcttctttttatGCCAAAACCTCCATATTGGTGTCtaaatttcca gttttctttCATCTATTTTTTTCTGTCGTTTTACCTGTAACGCCTTCATA ACATCGTAAGTCCGTAGCATGGAAGCCAAGtccctttttcttcttctttt tccacCCCAGAGTAAATTATTGCTATGATGTGGTTGACATGTATGTTTCG GGTGCACAGGTGATGCAGAGCAATCCATTACTATTTCTCCACAGTCCCCA CATTCTTTCTTCTCGCTGCAAGGTTCGAAATATTTGCATTTATCATTCTT CGGTGACCCATTAGTCACGTTGATGGCTAGCGTTATTATGGTGAAGATTA CCAGTAAAATATATCCCATTTTCTcatatattttcaaattcagtattcaA AAACAAGAAGTTACTCGTAGGTTCTGATAAGTTTCCTTCCGATGAATTCA AACGAAATCAACGCTGTTGCGATTGATCTTCCCTCAACAAAAGTGTTTTG TAAACTGTTTATATTTTGTGTTTGCGCTAACTTTTAAATactctttattt agattttttccccACAGGAAGTGCAATATACCTGAAAGCATTTTAATGAT GATCAGTTAAACAGCATTTTTGCTTAATTAATTCTTGAGAAAGAATTTTT ACGCACTTCCCCGTATGCAATTGTTGTTTTCCATGGCAATCCGCCTTTCA TTTAGCATCTTTAgataagaaataaataagaaatctTCATTTACAttctt aatatctttttaatgaaTCCCAATAGATTAATAATatctttttaattcat ttttatcATTCNATTCgtaatatctttttaatgaaGCCCAATAGATTAGT AATATCTTTTTAATTAATCTTTATCATTTATTTTCGCAAGCATTATAAAG TCCAATATGTGAAAAGAACGTGGGAGTATAGGAAAAAGTGGAATGTGTGC TTTTAgaagtatttcaaaatatttcaattcttgACGTATATGTCTTAGGT CAAAACATATGTTAGCAACGTCATACATTTACGCTCCAAGAAAAATTATG GGCGTGtctataatttgaaaatttcagaatgTCATGAGAACTTATAAACA GCCCTTTTTAAcaacaatttaacaatttgaATTCAGTCAAAGTCATGCTC AGGACAACAAAACAGAAACACATTATGACTTCAAATTTATGTCTCGGTCA GCAAGAGCGTGTAGTGAGCTAGCTAAACTGAGGAAGTTCAAGGCAATCTA GAAGGGCTTCTCAAAATTGTAGTGTTGGACTATTTTTCTCGTCAAGGGCG ACTTTTTGTTAGGTTTTCCAGTAGGTAGGGAATTCTATTGGACCAGGTCA TGAGGATGTGATGCCTGTTGTTAACATACGTATGATTAAATTTCTGAGCA CGTGCTTTGGCCTTGATTAATACTAATTTAGCTGGCTTTTGCCAACCGCT TATCACCTATTACAGAAGCACTTTGtggattttcaattcatttgGAATGG TTATTTTCTTATTCAATCAAAAATGGAAATACGAAAattcaaaatacgaa attttgcaaaatagTGCTCGtgtcagcaaaatttcgaaaaaatattctTG CAAAATTATCCTTTTTATGATGTGCAACTTTTCATGGTTCTACCATTAGC CAACGAAACtggatttattttaaaaaaaaatttggccctttttggttttt gcgttATTTCGTGATCAAAACTTTATCATGGTACCCTTCGTATTAAATCA CTAGTTTGCTCATTTCCCACCGGCTAATGctttctaaaaattatggtaat ttttatGCTTTTGAGTCATGCCATaggtgtaaaatttcaaattgttatgA ATGATATCATATAAACAGTCCTTTCAATCAATATTAATTGAAGCACCCTA ATTACAACAAGGCAGAGATACGCATAGGACATTAACAATTGCATTACTGA GTGAAATGAAAGTGAAATTGTAGTTTGAAACTATAGGTAAATCGTGTTAA AATTATTATATACGATGCAGCCATGTCTCGCTCAGCAAGATGTCATAGAA ACAATCTAGAAGGGTCTCTCAAATTGTAATTCTTTTACCCCACTGGGACG CTAGGTCAGTATATTTTTCCCATCTGGATGAAGTTTTAGGCTCTTTGCCA CATCAGGGGTgactttttgtcggtttttcaGTAGGGAGGGAAATCTAACC AGGTTATGAGGTTCCGATGCCTTTTAACTTTTCTTTGTTGTTAACGTCTC ATTAAGTTTCTGAAAGAGATATGAATTGACTTACGCGAGCACGTGCTTTG GCCATGATTAATACTAACGGCTGATTTATCGCCTATTACAGAAGCACTTT GtggattttcaattcatttgTAATGGTTATTTTTTCTCTTATACaatcaa atattatttttgaattatttttttctctgaCCATCTTAGTATACTTGCCA GCTATCATCCAAACAGTCAGAATTCATTCAATGGCCTGACTTTTAGTTTT GCATGCGACCCAGTTCTTCCAAAATAACGATAATTCTTCGATAAAAAAGC AACTTTTTAATCAGGACTTCGAGGGAAatcacatttttgaaaattaagaa gaaaaattgaaagaggACCAAAGAGATTTTCAAGTATTCGTTcacatttt ctgtttttgtgCACAAAATATGTGTaactaaaaagtaaatttaaagacCA AAATAAATCCACAAATGTGACCAGATGTGACAGAGTTAAATCTCAGGCAA ATTTCACCGGAAAACGGTTAAAAgggttttttgattttgatgtaaATTTG CCGTTATTGATTTATTCTAAGTTTTTGCCTAAAAGTACGGTATTGCTAAT GGTTAAAGATTGCCGAATCAGGTTTAGGCCTTGTCTTTCAGACTCAATTT TCAGATTTACTCATTtcattactctcgggtacctaatagccgcccccccc ctgcttattaatttttgggaaaatgtttttgaaagttccctctttagtcc taattctgctgtattagcctccttttcaaacattttccacccaggacatt ttttattccaatcccccccgtttattaaattttgagatattttccaaccc cctgcttattccaaccctcccggctattaggtacccgagactACTCAGTT CAAATGGTCATTCTTCAtataagttttttattttaaacaatatttcgacc tccTTAGTGGAGATGGTCATCAGGTTTACAAACGTTTAGTTGAGATCATC AGCTTTTTCGGATTATTTGAAAGTATCATATAAATGTGACTAACATAGAT AGTTTGGAAGATTGGACTGTTttagaaatagtctgtaccccctatgttga ggaggtatgACGTCCATGGTGTTCTGGAAAATTTTGGTGGTCTAgttttt tgaataataaaatccagggtggtctaaAGAAATCCAAGGaatcctgaaaa attgaaaaaaaatccagggggatctcctcaacatagggggtacaattctt tttggaaaaaagcaaaaaataaattttttgaataaatttatcaaatattt cATCCTTTTTCTTAGTTGCAGCTGAATCATGCGAGGATAGAATAGGAACT CCCATGTGCAAGAAACTTAAGGAACTTCTTCCCCCGGCCGTCAAGAAGAT TGTTTGCAGAAAGACCTGTGGATTTTGTTCTCAAGGTAAACATACAATCA aaatcataatatttgagaaaaaagggaaattcccacgaaatcttaaaaCC ACACACGCAGCCtagatttggaagtgctctaaacTAGGTTGGatgggtag agttttaacttaaGACTTaaaaccttaggatctgaggaactaaaattcca aaaatggtctaataggactcagaatatagcctggaagtggaagtctataa acccctcccgaattgagaCGAAATTGagatattcgaataaatttcaattt gcccaaaagcgactctttcgcccgaactttaaattgggcttttccagaaa tagtctgtgccctcctgttgaggatatttttgttcaaaagtgaatatcca gggggtcaaatatctacaagggagcggatatccaggggtaaagtttcttt tcaagtaaagaatacgatatccagggggtaagcatttttataaaagagga tatccaggggattgagcatatttttaagattggatatccagggggtcttt actaataaagtaagATCCAGGGGgctcgatacttcgaaaaatcaatatcc tcattTTGATTgtaaattcatcaaaaaattacaTTACTTCATTCATTCTG TTTATGGGCCCCAAAGTACAACGTTTCAAAATTTAATCCTTCAAAGTCGT GTTTATTACAAAATGGCTTTATTTATTGCACCATCTTCTAATCTGGTCGT GAATAACGATCTTTGATTCTTTTATTCATCAGATGAAACGGCTTCAGATG TAGTGTCACGTGACAAAAGAGGCGCATGCGTCAACAAGACTACTTATTGC CAATTTCACGGCACATGGTTGGCTTGCAAGATTAATGTATGGGTCCGAGC AAACTGTCAAAAGCACTGCAAACTATGCTAGgcgaaatatcaaaataaat ttttattgcaatgaattatctttgatgaaaatttcattttcaagaaaaga TTTTGATAATGCCGAATCCGCAAAACATTGAACATACctgcaaaagtttt tttatttggaGAGCTGGTATAATGAAAATATACACAGAAAG

Coding sequence (CDS) from alignment at sc0000079:211790..226230+

>TCONS_00007707 ID=TCONS_00007707|Name=TCONS_00007707|organism=Clytia hemisphaerica|type=CDS|length=999bp|location=Sequence derived from alignment at sc0000079:211790..226230+ (Clytia hemisphaerica)
ATGGAAAATCTTGTTTTGACCTGTCTTGTGGCAATAGTTTTGATGGCTAA
TGTTAGCAGTACagTTGCAGCTGAATCATGCGAGGATAGAATAGGAACTC
CCATGTGCAAGAAACTTAAGGAACTTCTTCCCCCGGCCGTCAAGAAGATT
GTTTGCAGAAAGACCTGTGGATTTTGTTCTCAAGATGAAACGGCTTCAGA
TGTAGTGTCACGTGACAAAAGAGGCGCATGCGTCAACAAGACTACTTATT
GCCAATTTCACGGCACATGGTTGGCTTGCAAGATTAATGTATGGGTCCGA
GCAAACTGTCAAAAGCACTGCAAACTATGCTAGATGGAAAATCTTGTTTT
GACCTGTCTTGTGGCAATAGTTTTGATGGCTAATGTTAGCAGTACagTTG
CAGCTGAATCATGCGAGGATAGAATAGGAACTCCCATGTGCAAGAAACTT
AAGGAACTTCTTCCCCCGGCCGTCAAGAAGATTGTTTGCAGAAAGACCTG
TGGATTTTGTTCTCAAGATGAAACGGCTTCAGATGTAGTGTCACGTGACA
AAAGAGGCGCATGCGTCAACAAGACTACTTATTGCCAATTTCACGGCACA
TGGTTGGCTTGCAAGATTAATGTATGGGTCCGAGCAAACTGTCAAAAGCA
CTGCAAACTATGCTAGATGGAAAATCTTGTTTTGACCTGTCTTGTGGCAA
TAGTTTTGATGGCTAATGTTAGCAGTACagTTGCAGCTGAATCATGCGAG
GATAGAATAGGAACTCCCATGTGCAAGAAACTTAAGGAACTTCTTCCCCC
GGCCGTCAAGAAGATTGTTTGCAGAAAGACCTGTGGATTTTGTTCTCAAG
ATGAAACGGCTTCAGATGTAGTGTCACGTGACAAAAGAGGCGCATGCGTC
AACAAGACTACTTATTGCCAATTTCACGGCACATGGTTGGCTTGCAAGAT
TAATGTATGGGTCCGAGCAAACTGTCAAAAGCACTGCAAACTATGCTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004369XLOC_004369Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007707-proteinTCONS_00007707-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007707-exon-sc0000079-1491911889:211790..211971TCONS_00007707-exon-sc0000079-1491911889:211790..211971Clytia hemisphaericaexon
TCONS_00007707-exon-sc0000079-1510915933:211790..211971TCONS_00007707-exon-sc0000079-1510915933:211790..211971Clytia hemisphaericaexon
TCONS_00007707-exon-sc0000079-1575043694:211790..211971TCONS_00007707-exon-sc0000079-1575043694:211790..211971Clytia hemisphaericaexon
TCONS_00007707-exon-sc0000079-1491911889:225055..225174TCONS_00007707-exon-sc0000079-1491911889:225055..225174Clytia hemisphaericaexon
TCONS_00007707-exon-sc0000079-1510915933:225055..225174TCONS_00007707-exon-sc0000079-1510915933:225055..225174Clytia hemisphaericaexon
TCONS_00007707-exon-sc0000079-1575043694:225055..225174TCONS_00007707-exon-sc0000079-1575043694:225055..225174Clytia hemisphaericaexon
TCONS_00007707-exon-sc0000079-1491911889:225922..226230TCONS_00007707-exon-sc0000079-1491911889:225922..226230Clytia hemisphaericaexon
TCONS_00007707-exon-sc0000079-1510915933:225922..226230TCONS_00007707-exon-sc0000079-1510915933:225922..226230Clytia hemisphaericaexon
TCONS_00007707-exon-sc0000079-1575043694:225922..226230TCONS_00007707-exon-sc0000079-1575043694:225922..226230Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000079supercontigsc0000079:211790..226230 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.5003 1.9794 0 1.75969 0.952114 1.59879 1.47502 1.3809 1.41301 1.93448 1.52001 1.05797 6.04552 7.68029 0.350791 0.699126 7.81765 11.1216 45.0672 25.3077 86.8444 98.8604 17.101 19.8711 19.6953 24.3548 0 0 0.48977 0.598798
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007707 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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