TCONS_00007681 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007681
Unique NameTCONS_00007681
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length164

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007681 ID=TCONS_00007681|Name=TCONS_00007681|organism=Clytia hemisphaerica|type=transcript|length=164bp
cagataataaagaaaataaaaaatgaaagaaatttacaAGAATTGATACC
AAACAAGatttatcaaaagaaagctCAAAATGATGGTTTACATCGTCGGA
TGGCTGACAAGAAGaaaggaattgaaaaaaattcatgcAAGCCAGGGATG
CATTGGAAAATGTA
Run BLAST on NCBI

transcript from alignment at sc0000079:12919..13518+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007681 ID=TCONS_00007681|Name=TCONS_00007681|organism=Clytia hemisphaerica|type=transcript|length=600bp|location=Sequence derived from alignment at sc0000079:12919..13518+ (Clytia hemisphaerica)
cagataataaagaaaataaaaaatgaaagaaatttacaAGAATTGATACC
AAACAAGatttatcaaaagaaagctCAAAATGATGGTTTACATCGTCGGT
AAATATTATCAAATTTatacgttttctttataagaacatcaaaaattttt
gaagtcttcggattttcttaactttttgagtttcaagcctaacaatgttc
ttaacaatgttcttattttcccattttgtgagtatttttgtccattttcc
taagaaattgggtgttctaGAATCTGAAAAGCcatgaaatgttcttaact
tgttcttaagattttggtcatcgaagccttatgttcttaagtagtttgtt
cttataaaaaaacacgtatGCTTATATTTCCTCATGGTCAACCAGAAGTT
AAACTAAAGTCTATTTGCCAGTATACTTGCACTCTTCTTTGCTACCATGA
AGAAAACCACCCTTACTGGTTTTTATTGAGCACACAGATCACAATCTATA
CTAGTTTTAATCATTATTGTTTTTACGTTTATAGGATGGCTGACAAGAAG
aaaggaattgaaaaaaattcatgcAAGCCAGGGATGCATTGGAAAATGTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004354XLOC_004354Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007681-exon-sc0000079-1491911889:12919..13016TCONS_00007681-exon-sc0000079-1491911889:12919..13016Clytia hemisphaericaexon
TCONS_00007681-exon-sc0000079-1510915933:12919..13016TCONS_00007681-exon-sc0000079-1510915933:12919..13016Clytia hemisphaericaexon
TCONS_00007681-exon-sc0000079-1575043694:12919..13016TCONS_00007681-exon-sc0000079-1575043694:12919..13016Clytia hemisphaericaexon
TCONS_00007681-exon-sc0000079-1491911889:13453..13518TCONS_00007681-exon-sc0000079-1491911889:13453..13518Clytia hemisphaericaexon
TCONS_00007681-exon-sc0000079-1510915933:13453..13518TCONS_00007681-exon-sc0000079-1510915933:13453..13518Clytia hemisphaericaexon
TCONS_00007681-exon-sc0000079-1575043694:13453..13518TCONS_00007681-exon-sc0000079-1575043694:13453..13518Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000079supercontigsc0000079:12919..13518 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007681 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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