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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007650 ID=TCONS_00007650|Name=TCONS_00007650|organism=Clytia hemisphaerica|type=transcript|length=1100bp
attagaggggtcatttatagggtttcctaggctagatcatgagatatttg
agtatgaaattttgctgactcagcgtttttcaacgtttttggcCCTTTTC
TGCTGAGTCAGAAAAAttgtgatgcaacatattattaacgtctttttaaa
gttcataacgtctttttaaagttcataacgtcatttttgtaattaaattc
ttaattacttttatgggatttgatcaaaaagcaatttgtaaaggaaattc
tttgttaaaattgTAAAGGAACCCGAAACATTACTTTTATGCTCAAATAA
CAAAATCtattttttgactatggtcagagcccttaaattgcttttttttt
agCACAAAAACCATTTTAGAACTTAGTTCATTAATTTTGCAAAAGAATTA
AATTCGGGAAaacgcgaaaataagtccccgcgtaatatttgaaaactcat
gaatcgcgaaaataaatccctGCGAAATACTCAAATTttgcggatgagct
caaccgcgaaatttaatccccgcaaaaatttatcccaaaAGTACTTACAC
GAAATTATGTTTATATCTTCTAGGAGAAAAAGAGTGAATGTAATTCAAAT
AAGCTACCGGCTGGAATCTATGAAAGTACAATTAGAATACCTATATAAAT
ACAGTAATCGGTGTTGGACTCTTCAAACTCTTAGATTCTTGTGCAGAACG
CTTCataataggttaaattttcacaaaggAATACTATATCTTTAATTTTT
GTCATAACCCAAAAATTGCCAGTCGACGCACACCTACCCAGTCATGGTAG
TTTAGTGTGATTTCTTTGGGGATATGATAATGACAAAAtattacttttgt
tttcaggtATTAGCTAATGGCActgatttatcaaaaatacaaagaccTAC
CAATGCATAGAAGTACGACATCACACTGGTTAAAGAAATTTGGACAAAGG
AAGAATTATTAAATGGCTTGATAAATCCACAACCAGGGAAgacgaaaaaa
agaaaactggaCAGTGAAAAAGTTGAATTGATGAGTAGTAGAGAGATTTC
TGGAATTTGTTTTCATGTAAACAATCACTTGATTCGTCGTTTCGTTCCAG Run BLAST on NCBI transcript from alignment at sc0000078:108711..109810 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007650 ID=TCONS_00007650|Name=TCONS_00007650|organism=Clytia hemisphaerica|type=transcript|length=1100bp|location=Sequence derived from alignment at sc0000078:108711..109810 (Clytia hemisphaerica)
CTGGAACGAAACGACGAATCAAGTGATTGTTTACATGAAAACAAATTCCA
GAAATCTCTCTACTACTCATCAATTCAACTTTTTCACTGtccagttttct
ttttttcgtcTTCCCTGGTTGTGGATTTATCAAGCCATTTAATAATTCTT
CCTTTGTCCAAATTTCTTTAACCAGTGTGATGTCGTACTTCTATGCATTG
GTAggtctttgtatttttgataaatcagTGCCATTAGCTAATacctgaaa
acaaaagtaataTTTTGTCATTATCATATCCCCAAAGAAATCACACTAAA
CTACCATGACTGGGTAGGTGTGCGTCGACTGGCAATTTTTGGGTTATGAC
AAAAATTAAAGATATAGTATTcctttgtgaaaatttaacctattatGAAG
CGTTCTGCACAAGAATCTAAGAGTTTGAAGAGTCCAACACCGATTACTGT
ATTTATATAGGTATTCTAATTGTACTTTCATAGATTCCAGCCGGTAGCTT
ATTTGAATTACATTCACTCTTTTTCTCCTAGAAGATATAAACATAATTTC
GTGTAAGTACTtttgggataaatttttgcggggattaaatttcgcggttg
agctcatccgcaaAATTTGAGTATTTCGCagggatttattttcgcgattc
atgagttttcaaatattacgcggggacttattttcgcgttTTCCCGAATT
TAATTCTTTTGCAAAATTAATGAACTAAGTTCTAAAATGGTTTTTGTGct
aaaaaaaaagcaatttaagggctctgaccatagtcaaaaaataGATTTTG
TTATTTGAGCATAAAAGTAATGTTTCGGGTTCCTTTAcaattttaacaaa
gaatttcctttacaaattgctttttgatcaaatcccataaaagtaattaa
gaatttaattacaaaaatgacgttatgaactttaaaaagacgttatgaac
tttaaaaagacgttaataatatgttgcatcacaaTTTTTCTGACTCAGCA
GAAAAGGgccaaaaacgttgaaaaacgctgagtcagcaaaatttcatact
caaatatctcatgatctagcctaggaaaccctataaatgacccctctaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007650-exon-sc0000078-1491911889:108711..109810 | TCONS_00007650-exon-sc0000078-1491911889:108711..109810 | Clytia hemisphaerica | exon |
| TCONS_00007650-exon-sc0000078-1510915933:108711..109810 | TCONS_00007650-exon-sc0000078-1510915933:108711..109810 | Clytia hemisphaerica | exon |
| TCONS_00007650-exon-sc0000078-1575043694:108711..109810 | TCONS_00007650-exon-sc0000078-1575043694:108711..109810 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078 | supercontig | sc0000078:108711..109810 . |
Blast
The following BLAST results are available for this feature:
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