TCONS_00007596 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007596
Unique NameTCONS_00007596
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3487

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007596 ID=TCONS_00007596|Name=TCONS_00007596|organism=Clytia hemisphaerica|type=transcript|length=3487bp
TAACTCTTTATACTCTAAAACCAAAATATGACGATAAGAAAATAGTTTTC
tctataaaaattcaaaagatttattgttatagcaatttttaattatttat
tacACTTCATTTTTTCATCCGTAGACCCTTAGAGTTTCATTTTAAAGTGA
TGACCTGGATTTATGATCTTCATCTTATAcccattttcttttgtttattt
attcttAGAGACTTAAAtaattgaaatataaaaaaataataaacaaaaat
gtCGATGAAAAAGGGTTTATTAGACGAGGAAGAATCGCCTTCACACGAAT
TGACCGCTATCCATCTGGATGAAGTTTCAGAAGACACACGATTGAGTCCA
AACAAACATGCAAGCGAGGCTGATAGAACGTTCTTTCATGGTCTACCCAG
CCAGGTTGTGAGGACAAGCAGGGGGGATATCCATGTTATGATACAAGGCG
ATACATCAAAGAAACGTACAGCAATCGTCACACTACATGACATTGGTCAA
AACCACATCAGTGGGTTCCAGTCCATCTTCAGTTTTCATCAGTTCCGACC
ATTGTTGGACAACTTCACAGTGTATCATCTTAACTTCCCAGGGCAACAAG
AAAATGCACAAGAGCTGCCACAGGATTACGCATACCCTACCATGGATGAA
ATGACCGGAATGGTGGAAGAGGTTCTCAAATATTTCAACTTGACGAACAC
CATATGTTTTGGTATCGGTGCTGGAGCAAATGTGTTCGTTCGTCTTGGAT
TGATGGACCCTCGCCATGTGGAATGCTGTATTTTAGTCAACGCTACTTGC
ACTTCTTCCTCGTGGTCCGAATGGGGTTATGAAAAAATGTCCAGCCATTA
CCTGAAAACGAAAGGAATGACGCAATTCTGCGAAGATTTCCTACTGAGCC
ACTATTTCGGAAAAGTCGACGAGACAACCAACACAGATCTATTATCCATT
GTTCGAGACAATCTCCGTGCCATCAAATATCCACGAAATCTCGCCATGTT
CATGGAGTCTTACTCCAAGCGTCCAAACATTAAAATCACTCGACCGGTCA
TCGGAGATAAAACCATTAATACCATGAAATGCGGAACCCTAATTATCACC
GGTGCGAACTCACCTGCAGTTGACGACACGGTGAATCTGAATTCTAAACT
AGACCCTGCTAAAACGACTTGGATGAAGATCACCGACGCCACTAGTCTAG
TGTTGGACGAACAACCCACGAACGTCACCAATGCTATCGTTCTTTTCCTA
CAAGGCTATGGACACGcAATGAAAACAAGACCTCCAACTTTATCTTTCAC
TCGTCAAGAAGAGATACAAGGACCTCCAGCTATCTGCTGAATAAAACAAC
ACACAAGCACAGAGAGAAAGAAGATGCGTAGAAGCTAAGGAAAGTAATCC
TAAAAAGTCTCTCGTCGCAAAACAACAACCAGCCACGTTGCGTGTGGATA
AATGCTTATTTATTTTCGAATGCGACAAAATACGACTTATTATTGGCAAA
GTGATTTGTCTTTTAACCTAAATGCAATAGATGGTATATATTTAAGATAG
TAAAAAAATGTGTTAAACTTTACTAATTTTGCTTGCAAATAGAAGTTCAG
CCTCCAATGGGTAGTCAATGGTTTGTCCGCCAGATCTTGTCTGTCAGATG
GTTTTCTTTCATTCTCATTTCCAGAGGTTTTTTGTTTGCAAGCATTGTTT
ATTGTTTACTATAGTCTTGTTTAGTTCAGAGGTGTATAATGTTTAGTTTA
TGTatctagattttttttaattttcactttaATTTCGACATGATGACATC
GAGGTCTTTATTTTGACCATAATCAATTCAACTTAGGGATAGATTTTGTT
CTACTCAAGCTAATTCGATGGAAGGATTTTCTTTTATGTTCGTTCTTCCT
TCCATcataaaaaattgctaaaaagattgcaatatatttattttttaata
tgaaacttctgtaaaaaaaataatattttgaatgGAATAGAAAgtcaaaa
cttaattttttcagatttacaTGCCATAATATTTTAAATTACCAACTACA
TAATTATGGGCTTATAGTTTTATCTTTTAAATTTAACCTTTTCTAGCATG
CTTTGTTTTTTCAGTAGTTAAAATGCAAATCTTCAAAGTCACTTTTTTCC
ATGATGTTATCAAAAGAGGCTTGGTGTACACTCGGCAACGATGTTACAGC
TCTGTGCACAATGGACAAACATCAGCTTTAACAAGTTGTGAAGAACTGCA
TGAGAAATTACAAAATAAAGAATGGCAtaaaaaattgaggattttGGATG
CACGGTGTAACGTGGAACCTTTGGATTACNAtaaaaaattgaggattttG
GATGCACGGTGTAACGTTGAACCTTTGGATTACCAAGCTATGCACATGAA
GAATAGGATTCAAGGTTCCAAGTTTTTCTCGTTCACTGAAAGTTCTGATA
AAACTTCCAATTATCCAATCATGATGCCTACATCACGTGACTTCTCTGCT
TACGTCACCAGTCTGGGAATCTCCAATCAACACCACGTGATCGTTTACGA
TGACGATGATTCACTGGGTGCTTTCTTCTCACCAAGAGTGTGGTGGATGT
TTCGTGCATTTGGACATGAAAACATTTCCATCTTAGATGGTGGTTTTGGT
AAATGGCGTGTAGACGGATATCCAACAGTTTCTGGTGATTACACGATGGA
AGAAGATTTGGCGTCACCAGACCAACCTTTCAAAGCAATTCAAGAACCaa
aacattacgtcactttTGAACAGATGAAAAGAGACGTCGAATCTGAAAAT
CCGACACAACTAGTTGACACCCGTCTTCTCGACGAATTCTCTGCCGGACA
TATTCCAGGAGCCAAGATGACCCCTTTCACTGATTTTTTCAACAAAgata
aaacaatgaaaagcaaaGAGGATTTAGTTGAATTTTTCCGGTCCAGCAAA
GTGGATATTGATTCAGATATTATTTCAACATGCCAGATTGGAGTGACAGC
TGCTTTAGCTGCGCATGCTCTGTTTCAAGCAAGAGGGAAAGAAATTCCTG
TTTACGATGGCTCGTTTGCTGAATGGTTGGAACGAGCTCCTGAACTTGTA
TCACGTGATTGATTCCAACCAATCAATTTTCGATTGTCTAACACAGTAAA
GGGAATTTTGTGTTCGTCAAACTTTTTGCTTTTGATGAAATGGGGGAAAT
CATTACACGTTCACGGGGAAGGGACTTTAAGGGTCTTAGACATGGCGGAT
TTTGTAATGTATAGTCTTTTGGACTAAGTGTTCCGGTCGTTTGCTCTGGA
GAATATATGAGATACCATTGCATggatatatatttttataactttctata
tttttacttttgtaCCGAATCTATTATAGTATGGGGTAAtcgatttgttt
tttttttctaaatttttattttctaaaatttcacaTGTAGTTTACACACT
GGAAAATATATCGTAAGAGACAGGAATAGTTAAATGa
Run BLAST on NCBI

protein sequence of TCONS_00007596-protein

>TCONS_00007596-protein ID=TCONS_00007596-protein|Name=TCONS_00007596-protein|organism=Clytia hemisphaerica|type=polypeptide|length=363bp
MSMKKGLLDEEESPSHELTAIHLDEVSEDTRLSPNKHASEADRTFFHGLP
SQVVRTSRGDIHVMIQGDTSKKRTAIVTLHDIGQNHISGFQSIFSFHQFR
PLLDNFTVYHLNFPGQQENAQELPQDYAYPTMDEMTGMVEEVLKYFNLTN
TICFGIGAGANVFVRLGLMDPRHVECCILVNATCTSSSWSEWGYEKMSSH
YLKTKGMTQFCEDFLLSHYFGKVDETTNTDLLSIVRDNLRAIKYPRNLAM
FMESYSKRPNIKITRPVIGDKTINTMKCGTLIITGANSPAVDDTVNLNSK
LDPAKTTWMKITDATSLVLDEQPTNVTNAIVLFLQGYGHAMKTRPPTLSF
TRQEEIQGPPAIC
Run BLAST on NCBI

transcript from alignment at sc0000078:514859..520591+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007596 ID=TCONS_00007596|Name=TCONS_00007596|organism=Clytia hemisphaerica|type=transcript|length=5733bp|location=Sequence derived from alignment at sc0000078:514859..520591+ (Clytia hemisphaerica)
TAACTCTTTATACTCTAAAACCAAAATATGACGATAAGAAAATAGTTTTC
tctataaaaattcaaaagatttattgttatagcaatttttaattatttat
tacACTTCATTTTTTCATCCGTAGACCCTTAGAGTTTCATTTTAAAGTGA
TGACCTGGATTTATGATCTTCATCTTATAcccattttcttttgtttattt
attcttAGAGACTTAAAtaattgaaatataaaaaaataataaacaaaaat
gtCGATGAAAAAGGGTTTATTAGACGAGGAAGAATCGCCTTCACACGAAT
TGACCGCTATCCATCTGGATGAAGTTTCAGAAGACACACGATTGAGTCCA
AACAAACATGCAAGCGAGGCTGATAGAACGTTCTTTCATGGTCTACCCAG
CCAGGTTGTGAGGACAAGCAGGGGTATGTACGATAATAtttgatacctct
tttttaGTATGTTATAATGAATCTTTACAAGTTTGATTTATCAATATCCA
AAGAAACTTTTGCATCTTTTGCTATTGCCCCAAAGTCATGACTTCATTCA
TTCACTTAATCTTAGTTTATCCATGAGACCCCATGATATTTTGGTGTGTT
TGTCTTTTCAGAGGAAATCATTACAAGACTTTTTATCTGCTCTGTCAATC
TCGGTCTTTCTtctgttttgaaatattgataacTTGACATTCATTCCCTC
CACTCATCAGGGGATATCCATGTTATGATACAAGGCGATACATCAAAGAA
ACGTACAGCAATCGTCACACTACATGACATTGGTCAAAACCACATCAGTG
GGTTCCAGTCCATCTTCAGTTTTCATCAGTTCCGACCATTGTTGGACAAC
TTCACAGTGTATCATCTTAACTTCCCAGGGCAACAAGAAAATGCACAAGA
GCTGCCACAGGTTCATGTTTTTCcaacttttgtttaaaaaaaaatattct
accTAGTAGTTATGAGCCATTTGCAACTAAAATACAAGAcgtattttttg
tgttttccctacatttttgaatatttgaatACCCGGAAGATTCACAACGA
GTTAAAATGTTTTTCAGCatttaaagatcttttttccaactCACAATTta
tatagataatcTCTTTATCGTAATCCCTTTTTTTAACAGTGGAAATTATA
AGGTCCTGTGGGCTAATACACCTAAAGAATTAAGAACTGTTCCTTAAAAA
TAACAAGGTTTTAGATTGTGCTATCTTGGTAGGTCTACAATGTCATCTCG
AACAACTAATAACAGCCTAGTATGCACAATTTCGCTTGAACACTTCAATA
AAACAGTTTACTTATTTCACAGGATTACGCATACCCTACCATGGATGAAA
TGACCGGAATGGTGGAAGAGGTTCTCAAATATTTCAACTTGACGAACACC
ATATGTTTTGGTATCGGTGCTGGAGCAAATGTGTTCGTTCGTCTTGGATT
GATGGACCCTCGCCATGTGGAATGCTGTATTTTAGTCAACGCTACTTGCA
CTTCTTCCTCGTGGTCCGAATGGGGTTATGAAAAAGTATGCTTTGAGAAG
ATTTTTCaacaaactaaaatgaccaaTGTTTTGTAGTGGAAGATTACCAA
AAATTCTCAGAGCTGCTACTATTCTTAGACACAGCACAATCATTTTCAAG
CTTAaatatctaccattttgaaatacaAGCTCTTTTTACTTTATAAAGGA
AACTCGTTTGGAGATCTATTACAGGCTTTATTTTAGGTATTTATTTTATC
CGAAGTATGACAATATCCCAAACAGATGTCGATCTCCCAATAAGCCTAAT
ACTTAACTTTATTACCTTTGCAGATGTCCAGCCATTACCTGAAAACGAAA
GGAATGACGCAATTCTGCGAAGATTTCCTACTGAGCCACTATTTCGGAAA
AGTCGACGAGACAACCAACACAGATCTATTATCCATTGTTCGAGACAATC
TCCGTGCCATCAAATATCCACGAAATCTCGCCATGTTCATGGAGTCTTAC
TCCAAGCGTCCAAACATTAAAATCACTCGACCGGTCATCGGAGATAAAAC
CATTAATACCATGAAATGCGGAACCCTAATTATCACCGGTGCGAACTCAC
CTGCAGTTGACGACACGGTGAATCTGAATTCTAAACTAGACCCTGCTAAA
ACGACTTGGATGAAGATCACCGACGCCACTAGTCTAGTGTTGGACGAACA
ACCCACGAACGTCACCAATGCTATCGTTCTTTTCCTACAAGGCTATGGAC
ACGGTATGAATTTTCAGTccttttcagttataatccagtGCCTTTTTGAT
TGTGCTTTACCATAGTTTTACCATATGTCTTAGTGCCTTTGTCTCTTTGA
CAAGTAACGTGTATAATATGAATCGAGACTCTCTTTACTACGTTAGAATA
ATGCTATTCAAAGATTCGCACTAAGTGTGTAACTAGAGAGCATCTTTTTC
ACTTATAAGACGTTTCAAATTTCTCGACTACTTAGCCTTCCCTGTGTGTG
CTTAAGACCAcatttttgtcataaaaaaaatGGAACGTAGATGTATAGTT
GCTTGCTTTTCCAGCTGCTGCATATTTTCCTCTAAGAGTACTGTGCAATG
CCTGACTGTGACAAAACATAAGTAGGGCTTATTTTTTTGTGTTACACCAA
TTTGGTATTTACAAATTGCTTTAAATTGTATTACACTTCTTAACCTTATT
CAAAATGatatgtttttcttattttagcAATGAAAACAAGACCTCCAACT
TTATCTTTCACTCGTCAAGAAGAGATACAAGGACCTCCAGCTATCTGCTG
AATAAAACAACACACAAGCACAGAGAGAAAGAAGATGCGTAGAAGCTAAG
GAAAGTAATCCTAAAAAGTCTCTCGTCGCAAAACAACAACCAGCCACGTT
GCGTGTGGATAAATGCTTATTTATTTTCGAATGCGACAAAATACGACTTA
TTATTGGCAAAGTGATTTGTCTTTTAACCTAAATGCAATAGATGGTATAT
ATTTAAGATAGTAAAAAAATGTGTTAAACTTTACTAATTTTGCTTGCAAA
TAGAAGTTCAGCCTCCAATGGGTAGTCAATGGTTTGTCCGCCAGATCTTG
TCTGTCAGATGGTTTTCTTTCATTCTCATTTCCAGAGGTTTTTTGTTTGC
AAGCATTGTTTATTGTTTACTATAGTCTTGTTTAGTTCAGAGGTGTATAA
TGTTTAGTTTATGTatctagattttttttaattttcactttaATTTCGAC
ATGATGACATCGAGGTCTTTATTTTGACCATAATCAATTCAACTTAGGGA
TAGATTTTGTTCTACTCAAGCTAATTCGATGGAAGGATTTTCTTTTATGT
TCGTTCTTCCTTCCATcataaaaaattgctaaaaagattgcaatatattt
attttttaatatgaaacttctgtaaaaaaaataatattttgaatgGAATA
GAAAgtcaaaacttaattttttcagatttacaTGCCATAATATTTTAAAT
TACCAACTACATAATTATGGGCTTATAGTTTTATCTTTTAAATTTAACCT
TTTCTAGCATGCTTTGTTTTTTCAGTAGTTAAAATGCAAATCTTCAAAGT
CACTTTTTTCCATGATGTTATCAAAAGAGGCTTGGTGTACACTCGGCAAC
GATGTTACAGCTCTGTGCACAATGGACAAACATCAGCTTTAACAAGTTGT
GAAGAACTGCATGAGAAATTACAAAATAAAGAATGGCAtaaaaaattgag
gattttGGATGCACGGTGTAACGTGGAACCTTTGGATTACNAtaaaaaat
tgaggattttGGATGCACGGTGTAACGTTGAACCTTTGGATTACCAAGCT
ATGCACATGAAGAATAGGATTCAAGGTTTgtgaaaaatcaattcaaaagc
TCTCTCTAATTTGTTTTAGAATGGTTGTATTATTTCTAAAGCTATCCCAA
AATTTTGCGGCATTTTCATATTATAATGAAAAGTTTGTTTGCATTCTATA
CGGTGATGATGTTAGCGAAAACTGATATTATCTCATACTTGATATCAGCG
GCCTTATGCTTCAAACGGAACAGGAATGAAGCCTTTCGTAAACTGTttaa
tttttggtcaaaagaGGCTCAACAAAACGTGAATGTAATTTCCTTGCTTT
TTATTTATACAGGTTCCAAGTTTTTCTCGTTCACTGAAAGTTCTGATAAA
ACTTCCAATTATCCAATCATGATGCCTACATCACGTGACTTCTCTGCTTA
CGTCACCAGTCTGGGAATCTCCAATCAACACCACGTGATCGTTTACGATG
ACGATGATTCACTGGGTGCTTTCTTCTCACCAAGAGTGTGGTGGATGTTT
CGTGCATTTGGACATGAAAACATTTCCATCTTAGATGGTGGTTTTGGTAA
ATGGCGTGTAGACGGATATCCAACAGTTTCTGGTGATTACACGATGGAAG
AAGATTTGGCGTGTAAGTTTCGTTTCAACATTCTCTTACACAGCACCGCA
ATCACCGTCGaaatatatttacaattttgggtattttaacaattttcaga
atttaaagccgGGCGAGAATTAGCATTTCAGTACTTCTTTGtttcattga
atttttctaTTCGGGTGGGGAAGAGTGGTAGCCACTTTCCTGGCTATATT
TATATTCTCATCCTTATTGGAACGTTTTTAAGCTTTTAGATCTCGAGTCT
CAAGTATAACTATACTTTTAAACTGTACTTTATAAAACACTCAAAATTCA
CTCGGAGTACACTTTGGCACTTTGGCACTAAAGGGGATTGCCTTTAGTGC
CAGATATTACGGCAGTGATTGTACATAGAAGAAGCTGCTCTATTTTTCCT
AAACAGCTACCTTAGACCACAGTAAAAAACAGCTGCTAATACAGATGTCA
GCTAATTACACTGATCATTTTCCAGGTGACTGCAATGTGATGGCTCTTTT
TTCGTTTTAGCACCAGACCAACCTTTCAAAGCAATTCAAGAACCaaaaca
ttacgtcactttTGAACAGATGAAAAGAGACGTCGAATCTGAAAATCCGA
CACAACTAGTTGACACCCGTCTTCTCGACGAATTCTCTGCCGGACATATT
CCAGGAGCCAAGATGACCCCTTTCACTGATTTTTTCAACAAAgataaaac
aatgaaaagcaaaGAGGATTTAGTTGAATTTTTCCGGTCCAGCAAAGTGG
ATATTGATTCAGATATTATTTCAACATGCCAGATTGGAGTGACAGCTGCT
TTAGCTGCGCATGCTCTGTTTCAAGCAAGAGGGAAAGAAATTCCTGTTTA
CGATGGCTCGTTTGCTGAATGGTTGGAACGAGCTCCTGAACTTGTATCAC
GTGATTGATTCCAACCAATCAATTTTCGATTGTCTAACACAGTAAAGGGA
ATTTTGTGTTCGTCAAACTTTTTGCTTTTGATGAAATGGGGGAAATCATT
ACACGTTCACGGGGAAGGGACTTTAAGGGTCTTAGACATGGCGGATTTTG
TAATGTATAGTCTTTTGGACTAAGTGTTCCGGTCGTTTGCTCTGGAGAAT
ATATGAGATACCATTGCATggatatatatttttataactttctatatttt
tacttttgtaCCGAATCTATTATAGTATGGGGTAAtcgatttgttttttt
tttctaaatttttattttctaaaatttcacaTGTAGTTTACACACTGGAA
AATATATCGTAAGAGACAGGAATAGTTAAATGa

Coding sequence (CDS) from alignment at sc0000078:514859..520591+

>TCONS_00007596 ID=TCONS_00007596|Name=TCONS_00007596|organism=Clytia hemisphaerica|type=CDS|length=5460bp|location=Sequence derived from alignment at sc0000078:514859..520591+ (Clytia hemisphaerica)
atgtCGATGAAAAAGGGTTTATTAGACGAGGAAGAATCGCCTTCACACGA
ATTGACCGCTATCCATCTGGATGAAGTTTCAGAAGACACACGATTGAGTC
CAAACAAACATGCAAGCGAGGCTGATAGAACGTTCTTTCATGGTCTACCC
AGCCAGGTTGTGAGGACAAGCAGGGGGGATATCCATGTTATGATACAAGG
CGATACATCAAAGAAACGTACAGCAATCGTCACACTACATGACATTGGTC
AAAACCACATCAGTGGGTTCCAGTCCATCTTCAGTTTTCATCAGTTCCGA
CCATTGTTGGACAACTTCACAGTGTATCATCTTAACTTCCCAGGGCAACA
AGAAAATGCACAAGAGCTGCCACAGGATTACGCATACCCTACCATGGATG
AAATGACCGGAATGGTGGAAGAGGTTCTCAAATATTTCAACTTGACGAAC
ACCATATGTTTTGGTATCGGTGCTGGAGCAAATGTGTTCGTTCGTCTTGG
ATTGATGGACCCTCGCCATGTGGAATGCTGTATTTTAGTCAACGCTACTT
GCACTTCTTCCTCGTGGTCCGAATGGGGTTATGAAAAAATGTCCAGCCAT
TACCTGAAAACGAAAGGAATGACGCAATTCTGCGAAGATTTCCTACTGAG
CCACTATTTCGGAAAAGTCGACGAGACAACCAACACAGATCTATTATCCA
TTGTTCGAGACAATCTCCGTGCCATCAAATATCCACGAAATCTCGCCATG
TTCATGGAGTCTTACTCCAAGCGTCCAAACATTAAAATCACTCGACCGGT
CATCGGAGATAAAACCATTAATACCATGAAATGCGGAACCCTAATTATCA
CCGGTGCGAACTCACCTGCAGTTGACGACACGGTGAATCTGAATTCTAAA
CTAGACCCTGCTAAAACGACTTGGATGAAGATCACCGACGCCACTAGTCT
AGTGTTGGACGAACAACCCACGAACGTCACCAATGCTATCGTTCTTTTCC
TACAAGGCTATGGACACGcAATGAAAACAAGACCTCCAACTTTATCTTTC
ACTCGTCAAGAAGAGATACAAGGACCTCCAGCTATCTGCTGAatgtCGAT
GAAAAAGGGTTTATTAGACGAGGAAGAATCGCCTTCACACGAATTGACCG
CTATCCATCTGGATGAAGTTTCAGAAGACACACGATTGAGTCCAAACAAA
CATGCAAGCGAGGCTGATAGAACGTTCTTTCATGGTCTACCCAGCCAGGT
TGTGAGGACAAGCAGGGGGGATATCCATGTTATGATACAAGGCGATACAT
CAAAGAAACGTACAGCAATCGTCACACTACATGACATTGGTCAAAACCAC
ATCAGTGGGTTCCAGTCCATCTTCAGTTTTCATCAGTTCCGACCATTGTT
GGACAACTTCACAGTGTATCATCTTAACTTCCCAGGGCAACAAGAAAATG
CACAAGAGCTGCCACAGGATTACGCATACCCTACCATGGATGAAATGACC
GGAATGGTGGAAGAGGTTCTCAAATATTTCAACTTGACGAACACCATATG
TTTTGGTATCGGTGCTGGAGCAAATGTGTTCGTTCGTCTTGGATTGATGG
ACCCTCGCCATGTGGAATGCTGTATTTTAGTCAACGCTACTTGCACTTCT
TCCTCGTGGTCCGAATGGGGTTATGAAAAAATGTCCAGCCATTACCTGAA
AACGAAAGGAATGACGCAATTCTGCGAAGATTTCCTACTGAGCCACTATT
TCGGAAAAGTCGACGAGACAACCAACACAGATCTATTATCCATTGTTCGA
GACAATCTCCGTGCCATCAAATATCCACGAAATCTCGCCATGTTCATGGA
GTCTTACTCCAAGCGTCCAAACATTAAAATCACTCGACCGGTCATCGGAG
ATAAAACCATTAATACCATGAAATGCGGAACCCTAATTATCACCGGTGCG
AACTCACCTGCAGTTGACGACACGGTGAATCTGAATTCTAAACTAGACCC
TGCTAAAACGACTTGGATGAAGATCACCGACGCCACTAGTCTAGTGTTGG
ACGAACAACCCACGAACGTCACCAATGCTATCGTTCTTTTCCTACAAGGC
TATGGACACGcAATGAAAACAAGACCTCCAACTTTATCTTTCACTCGTCA
AGAAGAGATACAAGGACCTCCAGCTATCTGCTGAatgtCGATGAAAAAGG
GTTTATTAGACGAGGAAGAATCGCCTTCACACGAATTGACCGCTATCCAT
CTGGATGAAGTTTCAGAAGACACACGATTGAGTCCAAACAAACATGCAAG
CGAGGCTGATAGAACGTTCTTTCATGGTCTACCCAGCCAGGTTGTGAGGA
CAAGCAGGGGGGATATCCATGTTATGATACAAGGCGATACATCAAAGAAA
CGTACAGCAATCGTCACACTACATGACATTGGTCAAAACCACATCAGTGG
GTTCCAGTCCATCTTCAGTTTTCATCAGTTCCGACCATTGTTGGACAACT
TCACAGTGTATCATCTTAACTTCCCAGGGCAACAAGAAAATGCACAAGAG
CTGCCACAGGATTACGCATACCCTACCATGGATGAAATGACCGGAATGGT
GGAAGAGGTTCTCAAATATTTCAACTTGACGAACACCATATGTTTTGGTA
TCGGTGCTGGAGCAAATGTGTTCGTTCGTCTTGGATTGATGGACCCTCGC
CATGTGGAATGCTGTATTTTAGTCAACGCTACTTGCACTTCTTCCTCGTG
GTCCGAATGGGGTTATGAAAAAATGTCCAGCCATTACCTGAAAACGAAAG
GAATGACGCAATTCTGCGAAGATTTCCTACTGAGCCACTATTTCGGAAAA
GTCGACGAGACAACCAACACAGATCTATTATCCATTGTTCGAGACAATCT
CCGTGCCATCAAATATCCACGAAATCTCGCCATGTTCATGGAGTCTTACT
CCAAGCGTCCAAACATTAAAATCACTCGACCGGTCATCGGAGATAAAACC
ATTAATACCATGAAATGCGGAACCCTAATTATCACCGGTGCGAACTCACC
TGCAGTTGACGACACGGTGAATCTGAATTCTAAACTAGACCCTGCTAAAA
CGACTTGGATGAAGATCACCGACGCCACTAGTCTAGTGTTGGACGAACAA
CCCACGAACGTCACCAATGCTATCGTTCTTTTCCTACAAGGCTATGGACA
CGcAATGAAAACAAGACCTCCAACTTTATCTTTCACTCGTCAAGAAGAGA
TACAAGGACCTCCAGCTATCTGCTGAatgtCGATGAAAAAGGGTTTATTA
GACGAGGAAGAATCGCCTTCACACGAATTGACCGCTATCCATCTGGATGA
AGTTTCAGAAGACACACGATTGAGTCCAAACAAACATGCAAGCGAGGCTG
ATAGAACGTTCTTTCATGGTCTACCCAGCCAGGTTGTGAGGACAAGCAGG
GGGGATATCCATGTTATGATACAAGGCGATACATCAAAGAAACGTACAGC
AATCGTCACACTACATGACATTGGTCAAAACCACATCAGTGGGTTCCAGT
CCATCTTCAGTTTTCATCAGTTCCGACCATTGTTGGACAACTTCACAGTG
TATCATCTTAACTTCCCAGGGCAACAAGAAAATGCACAAGAGCTGCCACA
GGATTACGCATACCCTACCATGGATGAAATGACCGGAATGGTGGAAGAGG
TTCTCAAATATTTCAACTTGACGAACACCATATGTTTTGGTATCGGTGCT
GGAGCAAATGTGTTCGTTCGTCTTGGATTGATGGACCCTCGCCATGTGGA
ATGCTGTATTTTAGTCAACGCTACTTGCACTTCTTCCTCGTGGTCCGAAT
GGGGTTATGAAAAAATGTCCAGCCATTACCTGAAAACGAAAGGAATGACG
CAATTCTGCGAAGATTTCCTACTGAGCCACTATTTCGGAAAAGTCGACGA
GACAACCAACACAGATCTATTATCCATTGTTCGAGACAATCTCCGTGCCA
TCAAATATCCACGAAATCTCGCCATGTTCATGGAGTCTTACTCCAAGCGT
CCAAACATTAAAATCACTCGACCGGTCATCGGAGATAAAACCATTAATAC
CATGAAATGCGGAACCCTAATTATCACCGGTGCGAACTCACCTGCAGTTG
ACGACACGGTGAATCTGAATTCTAAACTAGACCCTGCTAAAACGACTTGG
ATGAAGATCACCGACGCCACTAGTCTAGTGTTGGACGAACAACCCACGAA
CGTCACCAATGCTATCGTTCTTTTCCTACAAGGCTATGGACACGcAATGA
AAACAAGACCTCCAACTTTATCTTTCACTCGTCAAGAAGAGATACAAGGA
CCTCCAGCTATCTGCTGAatgtCGATGAAAAAGGGTTTATTAGACGAGGA
AGAATCGCCTTCACACGAATTGACCGCTATCCATCTGGATGAAGTTTCAG
AAGACACACGATTGAGTCCAAACAAACATGCAAGCGAGGCTGATAGAACG
TTCTTTCATGGTCTACCCAGCCAGGTTGTGAGGACAAGCAGGGGGGATAT
CCATGTTATGATACAAGGCGATACATCAAAGAAACGTACAGCAATCGTCA
CACTACATGACATTGGTCAAAACCACATCAGTGGGTTCCAGTCCATCTTC
AGTTTTCATCAGTTCCGACCATTGTTGGACAACTTCACAGTGTATCATCT
TAACTTCCCAGGGCAACAAGAAAATGCACAAGAGCTGCCACAGGATTACG
CATACCCTACCATGGATGAAATGACCGGAATGGTGGAAGAGGTTCTCAAA
TATTTCAACTTGACGAACACCATATGTTTTGGTATCGGTGCTGGAGCAAA
TGTGTTCGTTCGTCTTGGATTGATGGACCCTCGCCATGTGGAATGCTGTA
TTTTAGTCAACGCTACTTGCACTTCTTCCTCGTGGTCCGAATGGGGTTAT
GAAAAAATGTCCAGCCATTACCTGAAAACGAAAGGAATGACGCAATTCTG
CGAAGATTTCCTACTGAGCCACTATTTCGGAAAAGTCGACGAGACAACCA
ACACAGATCTATTATCCATTGTTCGAGACAATCTCCGTGCCATCAAATAT
CCACGAAATCTCGCCATGTTCATGGAGTCTTACTCCAAGCGTCCAAACAT
TAAAATCACTCGACCGGTCATCGGAGATAAAACCATTAATACCATGAAAT
GCGGAACCCTAATTATCACCGGTGCGAACTCACCTGCAGTTGACGACACG
GTGAATCTGAATTCTAAACTAGACCCTGCTAAAACGACTTGGATGAAGAT
CACCGACGCCACTAGTCTAGTGTTGGACGAACAACCCACGAACGTCACCA
ATGCTATCGTTCTTTTCCTACAAGGCTATGGACACGcAATGAAAACAAGA
CCTCCAACTTTATCTTTCACTCGTCAAGAAGAGATACAAGGACCTCCAGC
TATCTGCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004286XLOC_004286Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007596-exon-sc0000078-1491911889:514859..515281TCONS_00007596-exon-sc0000078-1491911889:514859..515281Clytia hemisphaericaexon
TCONS_00007596-exon-sc0000078-1510915933:514859..515281TCONS_00007596-exon-sc0000078-1510915933:514859..515281Clytia hemisphaericaexon
TCONS_00007596-exon-sc0000078-1575043694:514859..515281TCONS_00007596-exon-sc0000078-1575043694:514859..515281Clytia hemisphaericaexon
TCONS_00007596-exon-sc0000078-1491911889:515569..515768TCONS_00007596-exon-sc0000078-1491911889:515569..515768Clytia hemisphaericaexon
TCONS_00007596-exon-sc0000078-1510915933:515569..515768TCONS_00007596-exon-sc0000078-1510915933:515569..515768Clytia hemisphaericaexon
TCONS_00007596-exon-sc0000078-1575043694:515569..515768TCONS_00007596-exon-sc0000078-1575043694:515569..515768Clytia hemisphaericaexon
TCONS_00007596-exon-sc0000078-1491911889:516181..516393TCONS_00007596-exon-sc0000078-1491911889:516181..516393Clytia hemisphaericaexon
TCONS_00007596-exon-sc0000078-1510915933:516181..516393TCONS_00007596-exon-sc0000078-1510915933:516181..516393Clytia hemisphaericaexon
TCONS_00007596-exon-sc0000078-1575043694:516181..516393TCONS_00007596-exon-sc0000078-1575043694:516181..516393Clytia hemisphaericaexon
TCONS_00007596-exon-sc0000078-1491911889:516682..517111TCONS_00007596-exon-sc0000078-1491911889:516682..517111Clytia hemisphaericaexon
TCONS_00007596-exon-sc0000078-1510915933:516682..517111TCONS_00007596-exon-sc0000078-1510915933:516682..517111Clytia hemisphaericaexon
TCONS_00007596-exon-sc0000078-1575043694:516682..517111TCONS_00007596-exon-sc0000078-1575043694:516682..517111Clytia hemisphaericaexon
TCONS_00007596-exon-sc0000078-1491911889:517586..518733TCONS_00007596-exon-sc0000078-1491911889:517586..518733Clytia hemisphaericaexon
TCONS_00007596-exon-sc0000078-1510915933:517586..518733TCONS_00007596-exon-sc0000078-1510915933:517586..518733Clytia hemisphaericaexon
TCONS_00007596-exon-sc0000078-1575043694:517586..518733TCONS_00007596-exon-sc0000078-1575043694:517586..518733Clytia hemisphaericaexon
TCONS_00007596-exon-sc0000078-1491911889:519021..519320TCONS_00007596-exon-sc0000078-1491911889:519021..519320Clytia hemisphaericaexon
TCONS_00007596-exon-sc0000078-1510915933:519021..519320TCONS_00007596-exon-sc0000078-1510915933:519021..519320Clytia hemisphaericaexon
TCONS_00007596-exon-sc0000078-1575043694:519021..519320TCONS_00007596-exon-sc0000078-1575043694:519021..519320Clytia hemisphaericaexon
TCONS_00007596-exon-sc0000078-1491911889:519819..520591TCONS_00007596-exon-sc0000078-1491911889:519819..520591Clytia hemisphaericaexon
TCONS_00007596-exon-sc0000078-1510915933:519819..520591TCONS_00007596-exon-sc0000078-1510915933:519819..520591Clytia hemisphaericaexon
TCONS_00007596-exon-sc0000078-1575043694:519819..520591TCONS_00007596-exon-sc0000078-1575043694:519819..520591Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007596-proteinTCONS_00007596-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000078supercontigsc0000078:514859..520591 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
186.781	180.822	211.847	200.18	22.7716	18.9332	36.7264	37.2563	35.0661	37.8141	41.7185	34.5891	31.3592	31.4434	21.3096	26.8038	40.5382	37.4349	24.2892	27.2985	36.9334	39.2012	80.2648	72.4987	48.0786	53.3171	68.263	55.5648	58.8255	56.9623
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR004142NDRG
IPR029058AB_hydrolase
Blast
[Close]
BLAST of TCONS_00007596 vs. Swiss-Prot (Human)
Match: NDRG3 (Protein NDRG3 OS=Homo sapiens GN=NDRG3 PE=1 SV=2)

HSP 1 Score: 213.386 bits (542), Expect = 3.119e-60
Identity = 113/301 (37.54%), Postives = 165/301 (54.82%), Query Frame = 3 
Query:  408 VRTSRGDIHVMIQGDTSKKRTAIVTLHDIGQNHISGFQSIFSFHQFRPLLDNFTVYHLNFPGQQENAQELPQDYAYPTMDEMTGMVEEVLKYFNLTNTICFGIGAGANVFVRLGLMDPRHVECCILVNATCTSSSWSEWGYEKMSSHYLKTKGMTQFCEDFLLSHYFGKVDETTNTDLLSIVRDNLRAIKYPRNLAMFMESYSKRPNIKITRPVIG--DKTINTMKCGTLIITGANSPAVDDTVNLNSKLDPAKTTWMKITDATSLVLDEQPTNVTNAIVLFLQGYGHAMKTRPPTLSFTR 1304
            + T+ G +HV I+G     R  I+T HDIG NH S F + F+F   + +  +F V H++ PGQQE A   P  Y YPTMDE+  M+  VL + +L + I  G+GAGA +  R  L  P  VE  +L+N    +  W +W   K+S       G+T    D +L+H+FG+ +   N DL+   R ++       NL +F+ SY+ R +++I RP++G  D    T+KC TL++ G NSPAV+  V  NS+L+P  TT +K+ D   L    QP  +T A   FLQG G+      P+ S TR
Sbjct:   35 IETTHGVVHVTIRGLPKGNRPVILTYHDIGLNHKSCFNAFFNFEDMQEITQHFAVCHVDAPGQQEGAPSFPTGYQYPTMDELAEMLPPVLTHLSLKSIIGIGVGAGAYILSRFALNHPELVEGLVLINVDPCAKGWIDWAASKLS-------GLTTNVVDIILAHHFGQEELQANLDLIQTYRMHIAQDINQDNLQLFLNSYNGRRDLEIERPILGQNDNKSKTLKCSTLLVVGDNSPAVEAVVECNSRLNPINTTLLKMADCGGLPQVVQPGKLTEAFKYFLQGMGYI-----PSASMTR 323
The following BLAST results are available for this feature:
BLAST of TCONS_00007596 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NDRG33.119e-6037.54Protein NDRG3 OS=Homo sapiens GN=NDRG3 PE=1 SV=2[more]
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