TCONS_00007596-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00007596-protein
Unique Name	TCONS_00007596-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	363

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00007596-protein ID=TCONS_00007596-protein|Name=TCONS_00007596-protein|organism=Clytia hemisphaerica|type=polypeptide|length=363bp
MSMKKGLLDEEESPSHELTAIHLDEVSEDTRLSPNKHASEADRTFFHGLP
SQVVRTSRGDIHVMIQGDTSKKRTAIVTLHDIGQNHISGFQSIFSFHQFR
PLLDNFTVYHLNFPGQQENAQELPQDYAYPTMDEMTGMVEEVLKYFNLTN
TICFGIGAGANVFVRLGLMDPRHVECCILVNATCTSSSWSEWGYEKMSSH
YLKTKGMTQFCEDFLLSHYFGKVDETTNTDLLSIVRDNLRAIKYPRNLAM
FMESYSKRPNIKITRPVIGDKTINTMKCGTLIITGANSPAVDDTVNLNSK
LDPAKTTWMKITDATSLVLDEQPTNVTNAIVLFLQGYGHAMKTRPPTLSF
TRQEEIQGPPAIC

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_004286	XLOC_004286	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00007596	TCONS_00007596	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004142	NDRG
IPR029058	AB_hydrolase

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004142	NDRG	PFAM	PF03096	Ndr	coord: 52..339 e-value: 2.1E-91 score: 305.5
IPR029058	Alpha/Beta hydrolase fold	GENE3D	3.40.50.1820		coord: 44..336 e-value: 2.1E-29 score: 102.4
IPR029058	Alpha/Beta hydrolase fold	SUPERFAMILY	53474	alpha/beta-Hydrolases	coord: 51..335

Blast

[Close]

BLAST of TCONS_00007596-protein vs. Swiss-Prot (Human)
Match: NDRG3 (Protein NDRG3 OS=Homo sapiens GN=NDRG3 PE=1 SV=2)

HSP 1 Score: 213.386 bits (542), Expect = 4.788e-66
Identity = 113/301 (37.54%), Postives = 165/301 (54.82%), Query Frame = 0

Query:   54 VRTSRGDIHVMIQGDTSKKRTAIVTLHDIGQNHISGFQSIFSFHQFRPLLDNFTVYHLNFPGQQENAQELPQDYAYPTMDEMTGMVEEVLKYFNLTNTICFGIGAGANVFVRLGLMDPRHVECCILVNATCTSSSWSEWGYEKMSSHYLKTKGMTQFCEDFLLSHYFGKVDETTNTDLLSIVRDNLRAIKYPRNLAMFMESYSKRPNIKITRPVIG--DKTINTMKCGTLIITGANSPAVDDTVNLNSKLDPAKTTWMKITDATSLVLDEQPTNVTNAIVLFLQGYGHAMKTRPPTLSFTR 352
            + T+ G +HV I+G     R  I+T HDIG NH S F + F+F   + +  +F V H++ PGQQE A   P  Y YPTMDE+  M+  VL + +L + I  G+GAGA +  R  L  P  VE  +L+N    +  W +W   K+S       G+T    D +L+H+FG+ +   N DL+   R ++       NL +F+ SY+ R +++I RP++G  D    T+KC TL++ G NSPAV+  V  NS+L+P  TT +K+ D   L    QP  +T A   FLQG G+      P+ S TR
Sbjct:   35 IETTHGVVHVTIRGLPKGNRPVILTYHDIGLNHKSCFNAFFNFEDMQEITQHFAVCHVDAPGQQEGAPSFPTGYQYPTMDELAEMLPPVLTHLSLKSIIGIGVGAGAYILSRFALNHPELVEGLVLINVDPCAKGWIDWAASKLS-------GLTTNVVDIILAHHFGQEELQANLDLIQTYRMHIAQDINQDNLQLFLNSYNGRRDLEIERPILGQNDNKSKTLKCSTLLVVGDNSPAVEAVVECNSRLNPINTTLLKMADCGGLPQVVQPGKLTEAFKYFLQGMGYI-----PSASMTR 323

The following BLAST results are available for this feature:

BLAST of TCONS_00007596-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00007596-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
NDRG3	4.788e-66	37.54	Protein NDRG3 OS=Homo sapiens GN=NDRG3 PE=1 SV=2	[more]

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TCONS_00007596-protein (polypeptide) - C. hemisphaerica