TCONS_00007556 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007556
Unique NameTCONS_00007556
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1849

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007556 ID=TCONS_00007556|Name=TCONS_00007556|organism=Clytia hemisphaerica|type=transcript|length=1849bp
GAGTAAAGAAGTGAAGTcaacaaaatatatatttacattaaaaaCATATT
TTGAAATGGGTTTTTCATGTCCTTATTGTCACCAAGTGTATTACAATCAA
CAATCACTTGACCAACATTTGAAAGAATATCTCTTCTATCCATGTTTGAC
ATGCGCAGAAGAGTTCAGTTCATTGCGCCAACTGGAACAACATTGTGATG
CTGTGATTCACAGGTCACCACCAGTGGATCCTGAAACCCGCGATGAAAAA
TTGCAATTGTACCTCCAAGAAGCTTTCTACAAGGAGAAAGTTATTGTAAC
GCGGACAGACCGTCGAAAAGCTAGAAAACTTGTTCAAGGTTTGCTTGGAA
AGATTATGGAGGACGTTACTGAACAGCCTAACGGAGACTTGTACTCTAAA
AAGATCCAAGCTGCTGGAAGCACCTCAacgcaaacaaaaattatcGTAGC
GGATGAATTTGATTTCAATGTCGTTCTCACGCAGAAATTTTCCAGGTTCA
AGCATCATGAGGAATTAGTCGATTATGATCTAGTCAAACATAGTTTTATT
AAGTTGGACAAACATATCCGGATGGAGAGAGTATGGGATGATGATGAATA
TGCTTCCATAGTCATCCCAAATGGTTACACCGCACCTAAGCATTTTAATA
ATTCACCTTGGAGCATTAAGAACTTGTCGCATAACCATCAACTCATTCCC
AGATGGGTTCAAGAGGATTTGTACGCAAAAATCCAAAACTCATTGCAAGA
GGAACATTATGGTGCAAAGATCAGATTGAAATGTGTTCCAAACGGACCAG
CAATCACCATGTTTGTGAACCACACGGATGTTGACCATGAGATCAGTATC
GATCTCTCTGCTTGTATCGAGACTGACCTCCCTGTTGGAATCTATGGCTG
GCCACGGTCAGGAACTCTCCGTGTTTTATCAACACCTCAGATCAAGAAAA
TCGAAGAAGCTGGCATCATCTTGGTGCCTAAACATGAGCGCTTTTGGTAC
ATCTCTTTTTCGAAAGCCGTCACATCTTTGATGCAGTTTATCGATGGGGC
TGATGAGTGCCGAAGAACCTGTCATAAGATTTtgaagaaagatttcaaaa
cttgGCAATCGCAAACAGGATCCGCAGGACTGAAAGGAATCTCGACCTAT
CTTTTCAAGCATCACTTATTCTGGATGAACGAAAGTAAGCAGCATATGGG
CAAAACGTACTGGAAAAATCGATACATCGGTGATTGCTACATGGATATGT
TGGAATCTCTGGAAAAGAAATGCCGAGCAAGAAATCTGCCCAATTATTTT
AACACTAAGGAAAATATCCTTGCCAACAAGGATATCAATGTCTTGAACAA
GCTGGCCGGTTACTGCAAAGAACGAAGATTGCAATTATTGCACATTAAAA
TGGGTTGATATGGATGATGGATGTGattgattaattaacagaccaGTATG
TAATTAACACGAATGAATGATTTCTCTGATTAAGGGACCATTAACCTGta
agggaaaaaaataataGTAGGATTTTGCGTATCGAAATGAAACCATTTAA
ATGGTAAAATTGACGTCACTCACATAATGGTCCAATAGCAAAGCTTTATT
TCGCTACGAAAATTGTCTTGATGCTTAAACTAAAAATTCGATTATTTCCT
AACAATTTTTGCAGGAATATAtgtctcaaaatattttgtgaCAACTACAA
ATTGAATTCCATTCGGGATTCCATTATAATTTACTTGTATTAAAGTATAT
TTGTCATTGTTTCGAATAAGATTATTATATATTTTATCAATCGAAAAACT
AAACTTGTAAATATTCTAATTCGACATTTcgcttttgaagaattttcgc
Run BLAST on NCBI

protein sequence of TCONS_00007556-protein

>TCONS_00007556-protein ID=TCONS_00007556-protein|Name=TCONS_00007556-protein|organism=Clytia hemisphaerica|type=polypeptide|length=468bp
SKEVKSTKYIFTLKTYFEMGFSCPYCHQVYYNQQSLDQHLKEYLFYPCLT
CAEEFSSLRQLEQHCDAVIHRSPPVDPETRDEKLQLYLQEAFYKEKVIVT
RTDRRKARKLVQGLLGKIMEDVTEQPNGDLYSKKIQAAGSTSTQTKIIVA
DEFDFNVVLTQKFSRFKHHEELVDYDLVKHSFIKLDKHIRMERVWDDDEY
ASIVIPNGYTAPKHFNNSPWSIKNLSHNHQLIPRWVQEDLYAKIQNSLQE
EHYGAKIRLKCVPNGPAITMFVNHTDVDHEISIDLSACIETDLPVGIYGW
PRSGTLRVLSTPQIKKIEEAGIILVPKHERFWYISFSKAVTSLMQFIDGA
DECRRTCHKILKKDFKTWQSQTGSAGLKGISTYLFKHHLFWMNESKQHMG
KTYWKNRYIGDCYMDMLESLEKKCRARNLPNYFNTKENILANKDINVLNK
LAGYCKERRLQLLHIKMG
Run BLAST on NCBI

transcript from alignment at sc0000078:173460..176933+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007556 ID=TCONS_00007556|Name=TCONS_00007556|organism=Clytia hemisphaerica|type=transcript|length=3474bp|location=Sequence derived from alignment at sc0000078:173460..176933+ (Clytia hemisphaerica)
GAGTAAAGAAGTGAAGTcaacaaaatatatatttacattaaaaagtaagt tttgaattttcgaattttttatgtGATATTTGAAGTGGTTTGCGTGGATT TACGTGTAGtggatttacttgaaatttcatCTGCTTGTGTTATCTTGGAA CTATCTTTACCGTTGATATTTTGATGACGGTATTGTCTTTTATTTCTCTT TCAGCATATTTTGAAATGGGTTTTTCATGTCCTTATTGTCACCAAGTGTA TTACAATCAACAATCACTTGACCAACATTTGAAAGAATATCTCTTCTATC CATGTTTGACATGCGCAGAAGAGTTCAGTTCATTGCGCCAACTGGAACAA CATTGTGATGCTGTGATTCACAGGTCACCACCAGTGGATCCTGAAACCCG CGATGAAAAATTGCAATTGTACCTCCAAGAAGCTTTCTACAAGGAGAAAG TTATTGTAACGCGGACAGACCGTCGAAAAGCTAGAAAACTTGTTCAAGGT TTGCTTGGAAAGATTATGGAGGACGTTACTGAACAGCCTAACGGAGACTT GTACTCTAAAAAGATCCAAGCTGCTGGAAGCACCTCAacgcaaacaaaaa ttatcGTAGCGGATGAATTTGATTTCAATGTCGTTCTCACGCAGAAATTT TCCAGGTTCAAGCATCATGAGGAATTAGTCGATTATGATCTAGTCAAAGT AAGTACAACCTGAGCCTCAttcttgaaattaatttttttttagaaatcta aCTAGATTGACTCAGTCACAAAGCATAAATCTGTTGACTTATTGTTAGGG AATCTATAATTTCAtacataaagaaagaaaaatataccAGAGGCCGTATC TTTCCTTTATGAATTCGAACTTAATTTATCAGGCTACAATCTTAACTTGA TTTGAAAGTCCCAAAGGTGctagatttgaaatttttggatggAAAATAAA GCCAGATTTGGAAATAATGTGCTGCGCAGAAACAAAGATTCAATCCGTCG CATTCTAAATACGATGCAAGACGGtgcaaatcttaaggcttcattttttc ttgcttgagtgTTGAAGATTTAAACTCTGTTATCAAGCACCCTATCTCAA ACCAAACGTCAAGCGGATTTCTTTCCCCTGAAAAGCTAAAAGCCAAAAGC TTAAGAATATATTATACCCTATCAGTGAAAACATTTTGTCTGCTTTTTTT TAGCATAGTTTTATTAAGTTGGACAAACATATCCGGATGGAGAGAGTATG GGATGATGATGAATATGCTTCCATAGTCATCCCAAATGGTTACACCGCAC CTAAGCATTTTAATAATTCACCTTGGAGCATTAAGAACTTGTCGCATAAC CATCAACTCATTCCCAGATGGGTTCAAGAGGATTTGTACGCAAAAATCCA AAACTCATTGCAAGAGGAACATTATGGTGCAAGTAGGTCTTGTTGTTATG TTTATCGTATTCTAATTTGATAGACAGATGGTGGCGGATGAAATGAACAA GAATCCTCCCTAAACCACTTAAGTCTTTGAAAATAGCTAAGTGATATACC GTACATTTTGTAGTCTCTCTAGACGTAGCATACTATAGGTGACTATAATG ATTATTATCCTGTGACAATTATCAAATTATCATAGAACACCCGTATGACT TTATTACACGAATTATAAACAACTCCAGTCGATACATTTTGAGGTACACG ACTGATTCttaaagttttgatttcttttcttttatcagAGATCAGATTGA AATGTGTTCCAAACGGACCAGCAATCACCATGTTTGTGAACCACACGGAT GTTGACCATGAGATCAGTATCGATCTCTCTGCTTGTATCGAGACTGACCT CCCTGTTGGAATCTATGGCTGGCCACGGTCAGGAACTCTCCGTGTTTTAT CAACACCTCAGATCAAGAAAATCGAAGAAGCTGGCATCATCTTGGTGCCT AAACATGAGCGCTTTTGGTACATCTCTTTTTCGAAAGCCGTCACATCTTT GATGCAGTTTATCGATGGGGCTGATGAGTGCCGAAGAACCTGTCATAAGA TTTtgaagaaagatttcaaaacttgGCAATCGCAAACAGGATCCGCAGGA CTGAAAGGAATCTCGACCTATCTTTTCAAGGTATGCTTTAGTTTCAAAGc tacaatagacgatatcggaagGAAAAATCAGATTTTACCTCCGaaaattg cccacaatgctttgcgcggaaaaaNcttaacatgaaaactcagatttgac ctccgaaaattgcccacaatgctttgcgcggaaaaaagttcacggtgaat TTTTTTACGTCTATTGTTAAAAAAGTGCTTGTATGAGGCAGTCACTGAAA ATCACAGATACTTTCCAATCTGTCTTCAAAGATTTATAATAGAGAGAAAA AAGGAAGCGAAAATTTTAGACATGTCTCCTTCCCGTTTTGAACATTGATT TGAAAGTACAATCTCTGTAAACGtggactatgctatagtctaagacaaat cactatctaacaAATAAGCCCAAAGCCAAATGAAATTCGCAAACAGTTTT TTTGACGGAAGAAGTTTACAGTTGGaagagtttgccagtcttcaAAACGG CCGacttttttccgtataccgccataacggcTGTAAATTCCGCGcatata ttttcccgcctttactaacCCTTTAACGGACAATAACATCATTTTTGTaa acgttgtttttttttgtgtttaaaaTTCATGTACAtacttaaaatttaat ttaataaaggtttttcttatttttctcctTACAGCATCACTTATTCTGGA TGAACGAAAGTAAGCAGCATATGGGCAAAACGTACTGGAAAAATCGATAC ATCGGTGATTGCTACATGGATATGTTGGAATCTCTGGAAAAGAAATGCCG AGCAAGAAATCTGCCCAATTATTTTAACACTAAGGAAAATATCCTTGCCA ACAAGGATATCAATGTCTTGAACAAGCTGGCCGGTTACTGCAAAGAACGA AGATTGCAATTATTGCACATTAAAATGGGTTGATATGGATGATGGATGTG attgattaattaacagaccaGTATGTAATTAACACGAATGAATGATTTCT CTGATTAAGGGACCATTAACCTGtaagggaaaaaaataataGTAGGATTT TGCGTATCGAAATGAAACCATTTAAATGGTAAAATTGACGTCACTCACAT AATGGTCCAATAGCAAAGCTTTATTTCGCTACGAAAATTGTCTTGATGCT TAAACTAAAAATTCGATTATTTCCTAACAATTTTTGCAGGAATATAtgtc tcaaaatattttgtgaCAACTACAAATTGAATTCCATTCGGGATTCCATT ATAATTTACTTGTATTAAAGTATATTTGTCATTGTTTCGAATAAGATTAT TATATATTTTATCAATCGAAAAACTAAACTTGTAAATATTCTAATTCGAC ATTTcgcttttgaagaattttcgc

Coding sequence (CDS) from alignment at sc0000078:173460..176933+

>TCONS_00007556 ID=TCONS_00007556|Name=TCONS_00007556|organism=Clytia hemisphaerica|type=CDS|length=7035bp|location=Sequence derived from alignment at sc0000078:173460..176933+ (Clytia hemisphaerica)
AGTAAAGAAGTGAAGTcaacaaaatatatatttacattaaaaaCATATTT
TGAAATGGGTTTTTCATGTCCTTATTGTCACCAAGTGTATTACAATCAAC
AATCACTTGACCAACATTTGAAAGAATATCTCTTCTATCCATGTTTGACA
TGCGCAGAAGAGTTCAGTTCATTGCGCCAACTGGAACAACATTGTGATGC
TGTGATTCACAGGTCACCACCAGTGGATCCTGAAACCCGCGATGAAAAAT
TGCAATTGTACCTCCAAGAAGCTTTCTACAAGGAGAAAGTTATTGTAACG
CGGACAGACCGTCGAAAAGCTAGAAAACTTGTTCAAGGTTTGCTTGGAAA
GATTATGGAGGACGTTACTGAACAGCCTAACGGAGACTTGTACTCTAAAA
AGATCCAAGCTGCTGGAAGCACCTCAacgcaaacaaaaattatcGTAGCG
GATGAATTTGATTTCAATGTCGTTCTCACGCAGAAATTTTCCAGGTTCAA
GCATCATGAGGAATTAGTCGATTATGATCTAGTCAAACATAGTTTTATTA
AGTTGGACAAACATATCCGGATGGAGAGAGTATGGGATGATGATGAATAT
GCTTCCATAGTCATCCCAAATGGTTACACCGCACCTAAGCATTTTAATAA
TTCACCTTGGAGCATTAAGAACTTGTCGCATAACCATCAACTCATTCCCA
GATGGGTTCAAGAGGATTTGTACGCAAAAATCCAAAACTCATTGCAAGAG
GAACATTATGGTGCAAAGATCAGATTGAAATGTGTTCCAAACGGACCAGC
AATCACCATGTTTGTGAACCACACGGATGTTGACCATGAGATCAGTATCG
ATCTCTCTGCTTGTATCGAGACTGACCTCCCTGTTGGAATCTATGGCTGG
CCACGGTCAGGAACTCTCCGTGTTTTATCAACACCTCAGATCAAGAAAAT
CGAAGAAGCTGGCATCATCTTGGTGCCTAAACATGAGCGCTTTTGGTACA
TCTCTTTTTCGAAAGCCGTCACATCTTTGATGCAGTTTATCGATGGGGCT
GATGAGTGCCGAAGAACCTGTCATAAGATTTtgaagaaagatttcaaaac
ttgGCAATCGCAAACAGGATCCGCAGGACTGAAAGGAATCTCGACCTATC
TTTTCAAGCATCACTTATTCTGGATGAACGAAAGTAAGCAGCATATGGGC
AAAACGTACTGGAAAAATCGATACATCGGTGATTGCTACATGGATATGTT
GGAATCTCTGGAAAAGAAATGCCGAGCAAGAAATCTGCCCAATTATTTTA
ACACTAAGGAAAATATCCTTGCCAACAAGGATATCAATGTCTTGAACAAG
CTGGCCGGTTACTGCAAAGAACGAAGATTGCAATTATTGCACATTAAAAT
GGGTTGAAGTAAAGAAGTGAAGTcaacaaaatatatatttacattaaaaa
CATATTTTGAAATGGGTTTTTCATGTCCTTATTGTCACCAAGTGTATTAC
AATCAACAATCACTTGACCAACATTTGAAAGAATATCTCTTCTATCCATG
TTTGACATGCGCAGAAGAGTTCAGTTCATTGCGCCAACTGGAACAACATT
GTGATGCTGTGATTCACAGGTCACCACCAGTGGATCCTGAAACCCGCGAT
GAAAAATTGCAATTGTACCTCCAAGAAGCTTTCTACAAGGAGAAAGTTAT
TGTAACGCGGACAGACCGTCGAAAAGCTAGAAAACTTGTTCAAGGTTTGC
TTGGAAAGATTATGGAGGACGTTACTGAACAGCCTAACGGAGACTTGTAC
TCTAAAAAGATCCAAGCTGCTGGAAGCACCTCAacgcaaacaaaaattat
cGTAGCGGATGAATTTGATTTCAATGTCGTTCTCACGCAGAAATTTTCCA
GGTTCAAGCATCATGAGGAATTAGTCGATTATGATCTAGTCAAACATAGT
TTTATTAAGTTGGACAAACATATCCGGATGGAGAGAGTATGGGATGATGA
TGAATATGCTTCCATAGTCATCCCAAATGGTTACACCGCACCTAAGCATT
TTAATAATTCACCTTGGAGCATTAAGAACTTGTCGCATAACCATCAACTC
ATTCCCAGATGGGTTCAAGAGGATTTGTACGCAAAAATCCAAAACTCATT
GCAAGAGGAACATTATGGTGCAAAGATCAGATTGAAATGTGTTCCAAACG
GACCAGCAATCACCATGTTTGTGAACCACACGGATGTTGACCATGAGATC
AGTATCGATCTCTCTGCTTGTATCGAGACTGACCTCCCTGTTGGAATCTA
TGGCTGGCCACGGTCAGGAACTCTCCGTGTTTTATCAACACCTCAGATCA
AGAAAATCGAAGAAGCTGGCATCATCTTGGTGCCTAAACATGAGCGCTTT
TGGTACATCTCTTTTTCGAAAGCCGTCACATCTTTGATGCAGTTTATCGA
TGGGGCTGATGAGTGCCGAAGAACCTGTCATAAGATTTtgaagaaagatt
tcaaaacttgGCAATCGCAAACAGGATCCGCAGGACTGAAAGGAATCTCG
ACCTATCTTTTCAAGCATCACTTATTCTGGATGAACGAAAGTAAGCAGCA
TATGGGCAAAACGTACTGGAAAAATCGATACATCGGTGATTGCTACATGG
ATATGTTGGAATCTCTGGAAAAGAAATGCCGAGCAAGAAATCTGCCCAAT
TATTTTAACACTAAGGAAAATATCCTTGCCAACAAGGATATCAATGTCTT
GAACAAGCTGGCCGGTTACTGCAAAGAACGAAGATTGCAATTATTGCACA
TTAAAATGGGTTGAAGTAAAGAAGTGAAGTcaacaaaatatatatttaca
ttaaaaaCATATTTTGAAATGGGTTTTTCATGTCCTTATTGTCACCAAGT
GTATTACAATCAACAATCACTTGACCAACATTTGAAAGAATATCTCTTCT
ATCCATGTTTGACATGCGCAGAAGAGTTCAGTTCATTGCGCCAACTGGAA
CAACATTGTGATGCTGTGATTCACAGGTCACCACCAGTGGATCCTGAAAC
CCGCGATGAAAAATTGCAATTGTACCTCCAAGAAGCTTTCTACAAGGAGA
AAGTTATTGTAACGCGGACAGACCGTCGAAAAGCTAGAAAACTTGTTCAA
GGTTTGCTTGGAAAGATTATGGAGGACGTTACTGAACAGCCTAACGGAGA
CTTGTACTCTAAAAAGATCCAAGCTGCTGGAAGCACCTCAacgcaaacaa
aaattatcGTAGCGGATGAATTTGATTTCAATGTCGTTCTCACGCAGAAA
TTTTCCAGGTTCAAGCATCATGAGGAATTAGTCGATTATGATCTAGTCAA
ACATAGTTTTATTAAGTTGGACAAACATATCCGGATGGAGAGAGTATGGG
ATGATGATGAATATGCTTCCATAGTCATCCCAAATGGTTACACCGCACCT
AAGCATTTTAATAATTCACCTTGGAGCATTAAGAACTTGTCGCATAACCA
TCAACTCATTCCCAGATGGGTTCAAGAGGATTTGTACGCAAAAATCCAAA
ACTCATTGCAAGAGGAACATTATGGTGCAAAGATCAGATTGAAATGTGTT
CCAAACGGACCAGCAATCACCATGTTTGTGAACCACACGGATGTTGACCA
TGAGATCAGTATCGATCTCTCTGCTTGTATCGAGACTGACCTCCCTGTTG
GAATCTATGGCTGGCCACGGTCAGGAACTCTCCGTGTTTTATCAACACCT
CAGATCAAGAAAATCGAAGAAGCTGGCATCATCTTGGTGCCTAAACATGA
GCGCTTTTGGTACATCTCTTTTTCGAAAGCCGTCACATCTTTGATGCAGT
TTATCGATGGGGCTGATGAGTGCCGAAGAACCTGTCATAAGATTTtgaag
aaagatttcaaaacttgGCAATCGCAAACAGGATCCGCAGGACTGAAAGG
AATCTCGACCTATCTTTTCAAGCATCACTTATTCTGGATGAACGAAAGTA
AGCAGCATATGGGCAAAACGTACTGGAAAAATCGATACATCGGTGATTGC
TACATGGATATGTTGGAATCTCTGGAAAAGAAATGCCGAGCAAGAAATCT
GCCCAATTATTTTAACACTAAGGAAAATATCCTTGCCAACAAGGATATCA
ATGTCTTGAACAAGCTGGCCGGTTACTGCAAAGAACGAAGATTGCAATTA
TTGCACATTAAAATGGGTTGAAGTAAAGAAGTGAAGTcaacaaaatatat
atttacattaaaaaCATATTTTGAAATGGGTTTTTCATGTCCTTATTGTC
ACCAAGTGTATTACAATCAACAATCACTTGACCAACATTTGAAAGAATAT
CTCTTCTATCCATGTTTGACATGCGCAGAAGAGTTCAGTTCATTGCGCCA
ACTGGAACAACATTGTGATGCTGTGATTCACAGGTCACCACCAGTGGATC
CTGAAACCCGCGATGAAAAATTGCAATTGTACCTCCAAGAAGCTTTCTAC
AAGGAGAAAGTTATTGTAACGCGGACAGACCGTCGAAAAGCTAGAAAACT
TGTTCAAGGTTTGCTTGGAAAGATTATGGAGGACGTTACTGAACAGCCTA
ACGGAGACTTGTACTCTAAAAAGATCCAAGCTGCTGGAAGCACCTCAacg
caaacaaaaattatcGTAGCGGATGAATTTGATTTCAATGTCGTTCTCAC
GCAGAAATTTTCCAGGTTCAAGCATCATGAGGAATTAGTCGATTATGATC
TAGTCAAACATAGTTTTATTAAGTTGGACAAACATATCCGGATGGAGAGA
GTATGGGATGATGATGAATATGCTTCCATAGTCATCCCAAATGGTTACAC
CGCACCTAAGCATTTTAATAATTCACCTTGGAGCATTAAGAACTTGTCGC
ATAACCATCAACTCATTCCCAGATGGGTTCAAGAGGATTTGTACGCAAAA
ATCCAAAACTCATTGCAAGAGGAACATTATGGTGCAAAGATCAGATTGAA
ATGTGTTCCAAACGGACCAGCAATCACCATGTTTGTGAACCACACGGATG
TTGACCATGAGATCAGTATCGATCTCTCTGCTTGTATCGAGACTGACCTC
CCTGTTGGAATCTATGGCTGGCCACGGTCAGGAACTCTCCGTGTTTTATC
AACACCTCAGATCAAGAAAATCGAAGAAGCTGGCATCATCTTGGTGCCTA
AACATGAGCGCTTTTGGTACATCTCTTTTTCGAAAGCCGTCACATCTTTG
ATGCAGTTTATCGATGGGGCTGATGAGTGCCGAAGAACCTGTCATAAGAT
TTtgaagaaagatttcaaaacttgGCAATCGCAAACAGGATCCGCAGGAC
TGAAAGGAATCTCGACCTATCTTTTCAAGCATCACTTATTCTGGATGAAC
GAAAGTAAGCAGCATATGGGCAAAACGTACTGGAAAAATCGATACATCGG
TGATTGCTACATGGATATGTTGGAATCTCTGGAAAAGAAATGCCGAGCAA
GAAATCTGCCCAATTATTTTAACACTAAGGAAAATATCCTTGCCAACAAG
GATATCAATGTCTTGAACAAGCTGGCCGGTTACTGCAAAGAACGAAGATT
GCAATTATTGCACATTAAAATGGGTTGAAGTAAAGAAGTGAAGTcaacaa
aatatatatttacattaaaaaCATATTTTGAAATGGGTTTTTCATGTCCT
TATTGTCACCAAGTGTATTACAATCAACAATCACTTGACCAACATTTGAA
AGAATATCTCTTCTATCCATGTTTGACATGCGCAGAAGAGTTCAGTTCAT
TGCGCCAACTGGAACAACATTGTGATGCTGTGATTCACAGGTCACCACCA
GTGGATCCTGAAACCCGCGATGAAAAATTGCAATTGTACCTCCAAGAAGC
TTTCTACAAGGAGAAAGTTATTGTAACGCGGACAGACCGTCGAAAAGCTA
GAAAACTTGTTCAAGGTTTGCTTGGAAAGATTATGGAGGACGTTACTGAA
CAGCCTAACGGAGACTTGTACTCTAAAAAGATCCAAGCTGCTGGAAGCAC
CTCAacgcaaacaaaaattatcGTAGCGGATGAATTTGATTTCAATGTCG
TTCTCACGCAGAAATTTTCCAGGTTCAAGCATCATGAGGAATTAGTCGAT
TATGATCTAGTCAAACATAGTTTTATTAAGTTGGACAAACATATCCGGAT
GGAGAGAGTATGGGATGATGATGAATATGCTTCCATAGTCATCCCAAATG
GTTACACCGCACCTAAGCATTTTAATAATTCACCTTGGAGCATTAAGAAC
TTGTCGCATAACCATCAACTCATTCCCAGATGGGTTCAAGAGGATTTGTA
CGCAAAAATCCAAAACTCATTGCAAGAGGAACATTATGGTGCAAAGATCA
GATTGAAATGTGTTCCAAACGGACCAGCAATCACCATGTTTGTGAACCAC
ACGGATGTTGACCATGAGATCAGTATCGATCTCTCTGCTTGTATCGAGAC
TGACCTCCCTGTTGGAATCTATGGCTGGCCACGGTCAGGAACTCTCCGTG
TTTTATCAACACCTCAGATCAAGAAAATCGAAGAAGCTGGCATCATCTTG
GTGCCTAAACATGAGCGCTTTTGGTACATCTCTTTTTCGAAAGCCGTCAC
ATCTTTGATGCAGTTTATCGATGGGGCTGATGAGTGCCGAAGAACCTGTC
ATAAGATTTtgaagaaagatttcaaaacttgGCAATCGCAAACAGGATCC
GCAGGACTGAAAGGAATCTCGACCTATCTTTTCAAGCATCACTTATTCTG
GATGAACGAAAGTAAGCAGCATATGGGCAAAACGTACTGGAAAAATCGAT
ACATCGGTGATTGCTACATGGATATGTTGGAATCTCTGGAAAAGAAATGC
CGAGCAAGAAATCTGCCCAATTATTTTAACACTAAGGAAAATATCCTTGC
CAACAAGGATATCAATGTCTTGAACAAGCTGGCCGGTTACTGCAAAGAAC
GAAGATTGCAATTATTGCACATTAAAATGGGTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004273XLOC_004273Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007556-exon-sc0000078-1491911889:173460..173503TCONS_00007556-exon-sc0000078-1491911889:173460..173503Clytia hemisphaericaexon
TCONS_00007556-exon-sc0000078-1510915933:173460..173503TCONS_00007556-exon-sc0000078-1510915933:173460..173503Clytia hemisphaericaexon
TCONS_00007556-exon-sc0000078-1575043694:173460..173503TCONS_00007556-exon-sc0000078-1575043694:173460..173503Clytia hemisphaericaexon
TCONS_00007556-exon-sc0000078-1491911889:173664..174157TCONS_00007556-exon-sc0000078-1491911889:173664..174157Clytia hemisphaericaexon
TCONS_00007556-exon-sc0000078-1510915933:173664..174157TCONS_00007556-exon-sc0000078-1510915933:173664..174157Clytia hemisphaericaexon
TCONS_00007556-exon-sc0000078-1575043694:173664..174157TCONS_00007556-exon-sc0000078-1575043694:173664..174157Clytia hemisphaericaexon
TCONS_00007556-exon-sc0000078-1491911889:174663..174891TCONS_00007556-exon-sc0000078-1491911889:174663..174891Clytia hemisphaericaexon
TCONS_00007556-exon-sc0000078-1510915933:174663..174891TCONS_00007556-exon-sc0000078-1510915933:174663..174891Clytia hemisphaericaexon
TCONS_00007556-exon-sc0000078-1575043694:174663..174891TCONS_00007556-exon-sc0000078-1575043694:174663..174891Clytia hemisphaericaexon
TCONS_00007556-exon-sc0000078-1491911889:175198..175589TCONS_00007556-exon-sc0000078-1491911889:175198..175589Clytia hemisphaericaexon
TCONS_00007556-exon-sc0000078-1510915933:175198..175589TCONS_00007556-exon-sc0000078-1510915933:175198..175589Clytia hemisphaericaexon
TCONS_00007556-exon-sc0000078-1575043694:175198..175589TCONS_00007556-exon-sc0000078-1575043694:175198..175589Clytia hemisphaericaexon
TCONS_00007556-exon-sc0000078-1491911889:176244..176933TCONS_00007556-exon-sc0000078-1491911889:176244..176933Clytia hemisphaericaexon
TCONS_00007556-exon-sc0000078-1510915933:176244..176933TCONS_00007556-exon-sc0000078-1510915933:176244..176933Clytia hemisphaericaexon
TCONS_00007556-exon-sc0000078-1575043694:176244..176933TCONS_00007556-exon-sc0000078-1575043694:176244..176933Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007556-proteinTCONS_00007556-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000078supercontigsc0000078:173460..176933 +
Expression

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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.085695 0.278554 0.0979749 0.0316423 0.87519 1.00453 6.83082 11.4834 4.42977 32.0302 4.63043 4.42157 21.0029 16.0994 7.16457 10.0102 4.06894 3.33435 14.005 16.3799 1.72448 1.83495 3.44627 5.69496 11.2879 13.4323 5.18375 10.5574 2.13912 2.12554
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR024810Mab-21_dom
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007556 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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