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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007550 ID=TCONS_00007550|Name=TCONS_00007550|organism=Clytia hemisphaerica|type=transcript|length=1724bp
AAAAAATGTAAATGGTAGATAAAGTAGTGCGAGTctaaagaaaaaactca
aaagaatTCAGGAGCTGGAAGCTCATCGGAACACCAAGCTCATCGGGTCC
CAAAAGCAATCATTTTCGACTAGTTTATCGGCATAAAGTCTAATATCAAG
ATGGAACAAGATGTACCAAGAGCTGCGCTAGCAGTTATGGAGATAGAAAA
CATACTTGCTGCTAGTTTTGGGGAGAATGGGAAGCGTTGTTACAAAGTGC
AATGGAAGGAGAGCTGGGTTTTCGAAGATCATCTCTTCAGCTGTAAACCT
TTAGTGGAGAAGTTTTGGAAGAACCAAAAGCAAGACCCTTCTACTGCAAT
CACTATTTCTCAAAATACGGAGCCAACGACGCGAGGAACGAAGCGAGCTG
CGAAAGGAGGAGGGGGGAAGAAGAACATGAAAGTGATCGTTATTTCCAAC
AAAGAGAAGAAAGATGGTGAAGATGTAGTACAACAAACACAACACGTTGA
CAATGAGGAGGCTATCACAAATACTGATGACATTGACGGTGACTGGATAT
TAGATGGTTTAAACCAAGACGACGACAGTTCTAAAGAAAACGATAATTCC
TGGTTCGTCACGGCCGAAATGAAGAAGATTCGGCCTACTGGCGCAAAGTA
TACGCTTTCATGTCATATCTGTCCTAATGAGGAATTCGAAGCTGTTTCGA
CGTTTAGAAGACATTACATAACAATGCATCCAGGTGTGAAGGCCTTCTCT
TGCGATGTCTGCCAGAAACGTTTCGATCGTAAAGAAAACTTGATGAGACA
TATTCGAATACATACGGGCGATCGAAGAtatatttgtaatttttgcgGCA
AAGGATACACTGATCCTTCAGGTTTGAAAAAGCACGTGAATGCGAAACAC
GCTAATgagaaaaagatattcaaatgtGATATTTGTCAAGATACGTTCCC
TAATAAAGTCATCTTAGATAAACATTATGTGCAGCACGATGCGTCGACAG
ACCCCGCTCTGAATACGGAGCCGTCAGATGGAGAACATATACAACACGAG
GGGAGAGAAAGTGGCGAGGATACTTTAGAACTTCACACAGATAGTGAAAT
CTCTGCTATTCAGAAATCGAATTTGTTAGAAACGAGTATGGACCAATCAG
AAGTCGTCACTGATGATGAAACAACCACCATCGAAGTGTTGATGGAAAAA
TCTCCAGAAAACTTAAGTTCTTCCACAACAAATAGTGTTGTTCCAACCAC
GAACATTCTTGAAGCGACAGATATCAAAGACACTGAGCAACCCATGCAAA
ACGTTGTGAAACAGCTGCAACAGTTTGTTGACGAACAAGTTGTGCAGTAC
GTCCAAGTTACGAACACGGCAGAACAGACACAATCGCAACCTGTCACTCT
TAACTCTCCGACTCTTCACCATCATCAACCAAAAACATTCATATTTAATG
ACGCAACGGCGCCTGATCAGCAATCACATTTCGTTATTCCGATATCGGCG
CCTCAACTTTTGATTAACCCGGCAGGTGGTCAGAACAATTTACGGCAAGT
ATTACCAGCCGTTTCGAATCATCAACAACAAATCATAACTGTCCCTTTGA
CGCCTTCTTCTTTTGTTTACACTGGACCTTTAACTCCACACCACCCACCG
CCACAAACTTCAAATGATTCTTTACTTTCTGATGGGACGTAAAAACGATA
CAGTGTGGCCTAAATAAAGCGATT Run BLAST on NCBI protein sequence of TCONS_00007550-protein >TCONS_00007550-protein ID=TCONS_00007550-protein|Name=TCONS_00007550-protein|organism=Clytia hemisphaerica|type=polypeptide|length=513bp
MEQDVPRAALAVMEIENILAASFGENGKRCYKVQWKESWVFEDHLFSCKP
LVEKFWKNQKQDPSTAITISQNTEPTTRGTKRAAKGGGGKKNMKVIVISN
KEKKDGEDVVQQTQHVDNEEAITNTDDIDGDWILDGLNQDDDSSKENDNS
WFVTAEMKKIRPTGAKYTLSCHICPNEEFEAVSTFRRHYITMHPGVKAFS
CDVCQKRFDRKENLMRHIRIHTGDRRYICNFCGKGYTDPSGLKKHVNAKH
ANEKKIFKCDICQDTFPNKVILDKHYVQHDASTDPALNTEPSDGEHIQHE
GRESGEDTLELHTDSEISAIQKSNLLETSMDQSEVVTDDETTTIEVLMEK
SPENLSSSTTNSVVPTTNILEATDIKDTEQPMQNVVKQLQQFVDEQVVQY
VQVTNTAEQTQSQPVTLNSPTLHHHQPKTFIFNDATAPDQQSHFVIPISA
PQLLINPAGGQNNLRQVLPAVSNHQQQIITVPLTPSSFVYTGPLTPHHPP
PQTSNDSLLSDGT Run BLAST on NCBI transcript from alignment at sc0000078:119679..129910+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007550 ID=TCONS_00007550|Name=TCONS_00007550|organism=Clytia hemisphaerica|type=transcript|length=10232bp|location=Sequence derived from alignment at sc0000078:119679..129910+ (Clytia hemisphaerica)
AAAAAATGTAAATGGTAGATAAAGTAGTGCGAGTctaaagaaaaaactca
aaagaatTCAGGAGCTGGAAGCTCATCGGAACACCAAGCTCATCGGGTCC
CAAAAGCAATCATTTTCGACTAGTTTATCGGCATAAAGTCTAATATCAAG
ATGGAACAAGATGTACCAAGAGCTGCGCTAGCAGTTATGGAGATAGAAAA
CATACTTGCTGCTAGTTTTGGGGAGGTATATGATCTTTTCTCTTTCTCTT
ATTTAGCCCAGACTTAAAATTGTAATAACCCACGATATTGCCTATAATTT
CTAGGGCTACTTGGTGATTTTGAACTTAAAAGCCTAGAACATGACAAACC
TTGCCTAAGTATGTTAAAgctagtttttcaaaatttgtggcTTGAACTAC
AATTATGGTcgaaatatcttgaaattttaatgtatttcaacatttttcag
aatttaaagtttggcCTAATTTGGCCAGATTtggcacttccactttcttt
ccttgaatattttgattttagaggGGCTAAATGGCTtctctaggctatat
tccaagccttattcgagcaaattCAAGCTTTTAAATCATGAGAGATTCTG
AGAGGTCCTAAAAGTCTTATTAAAGTCTCatactctactttccaactgta
gtttaagccTAGTTGTATTgtagactccacctcaattcgcaagttgctag
caaaataagagacgtTCTGATAAAACCCCAAAAGAGACAGGATCTTAAGC
CTTTTATAATACCCTAAACACACCTCACAAACCTTGACGGCACAACTCCC
GTCACCCATCTTTCATCTTTCTTTCATTCTAGTTCTTCtaatgtaaatgg
tgccttaataaaaaatcaaacgatATTTGTTGAacgttcgaacattttta
tttgaatcgTCTGTTGAGCGAGATcatcaaaattaaacaaaatcaaaaat
atctacaaataataaaagatggcttgttgttggttcttggccagttttga
tttgttttcttgacaaattcgataAATTTGAGCTTATTtgagccccgggg
ggggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNTTAgattaacctaacaaataatatttttcctctttaggtcagctttgc
cgacccaaaacatttcttttgtctGCACGCCGACCTAGAGTGTAAATTAC
GTCGACTTCAGCCCAAGTTACGTCGGCTTTCAGGTCGGCATTGCCGAATG
CCGACTTGGATTCACAGGGCTGAGGAATAGTGAAGATCCTTTTTGTCATC
TTTCAAACTAatcttttttccatttaacagcaaaataaacattcaaAACC
ACTGTTTAGATGcgtgcccgcgcggcaatttgatcaacttcagattttaa
gTCCGTGTTttggcttccggtaatttttttgctgttcactgctagggtac
accattttaaaacagcatttttcgcagtcctagctaccaaaccgagaaca
TTTTTGTGGCTTTAAGCCAAACCCTTCTAAaggtcattttgacaaaatca
tcggtttaaaagatgtgatttatatagttaaaggtacgtgcacacaatgt
agcaaaactgcttcgctcataaattcgcttcgcaaaaatcatTTGTAgtc
aaacaattcttttttcagttagtagaTATTGTGGTAAACATTTATCAGAA
GAATGAATGGCTTTAAACCATTTCTCCATAAAAAAAATGATCATTGAATG
GTAAAAAAAttactgttttcaaattttttttgcctttctctGGTCTCGTG
ACACGCTTATGAcgccattttaaaaatttctttctatcaaaatgatccTC
ACACTATAAGTGAAAAAGGGTGAAAACTTAAGAGGCCTAGGTTTAGTgat
tccagagatattgaagCATAAGTTACGACTTAGTAGCTATAAAAactctg
ggactgaaagggttaatgAAAAAAAGCCCttattcatcaaaaaatatGAG
GGGTCACTTTTCTTTCGACCTGTTGAGTGTAGGTAGAACTTCGATattcc
ttggttagaaaaagctaaaatcgctaaaaagctggtaaaatttTGATTCT
GAAATATCGAAGTTCCACCTACACACTGCCTTTAGCTGGTAGATTTTTga
atattccattttgaagttccatTACCAAAAATTTTCCCTTAGCGCTTTCC
ACCAAAAACTCTTTGATTAgagatttttcagatttggaGAAAGAGAAAAC
ACTTTAACTTTTTAAGGTCGTAGTCCACTTAGCTTTTTTTGGTCGCCGCA
CAATGCGCACGGCTCgatttttgcataaattaaataaattaagcCTTCAA
GGCTTGTCGCAATGAACGGCGtgagcttttttgaaagttgaaaaaatcca
ACTTTGTGCGCAAAGCTGTACAGCTCTTCTATTGTTTTTTCAGAAGTAGC
CAATCAGCGAGAAGGTAAACATACTGATTGTgtgtttatttttatcattt
taaatttttttcgaaaaaaataaaagtaactTATACTAGAAAAAGGAAAT
AGTGTGTATATGTGTGTTGTGTAGGGTCAGTGAAAATGGATAATAATCTT
TACGAagaggatattgattttgaaGAAAGGAATGAGGAAGATTTAACAAA
TGAAATTAACCAGGATGAGGAGGAAGAATTCAGAAGGATGCAAGAATTTA
GAAGGAGCCAATTTCAATTTGCAATGAGCCAGCAAGCAATGAATTCAATG
TCAACAGTCCACCAACAAAACCAAACTTTTCCAACAGCAGCAAGAGCTGA
AATTGCAGCCCTTCAAGGCCTCCAAGCGTTGCAAAACTTAAGCCAGCCAG
AACCGCCACTTTCTCCAGGTGTCACTGTAGAAGCTTCACAATACGCTCAA
ATCACTCATCCTGCAAACGCCTCGAAAGAAATTTCAGATGAACTTTTAAT
CGACACGGTCAAATCGAACCCGATCATATGGAGTGCTTCAGgcaaaaaat
acaaagacaCCGAGAGGAAAAATCGAGCCTGGATAgagattggaaaaaat
ttgcATGCAGAACGTAAGTGATGACTTTATACTATCCAAAATAATCTATA
AGAAACAATTTCCTTGGCAAAACTAACTATTTCTGTAGAAagcaatttgt
ttttaaaaagtcaGTATTTATGAGTGAAGACTTTTTGAGTATAGTATttc
taaatcaatttttttttcttttttaagctgACACGTTAAAATCAAGATGG
AGNCGGTCAAATCAAACCCGATCATATGGAGTGCTTCAGgcaaaaaatac
aaagacaCCGAGAGGAAAAATCGAGCCTGGATAGAGATTGGAAAAAATTT
ACACGCAGAACGTAAGTGATGACTTTATACtatcgaaagcagccggcgag
gcgacctttttttccgatgtgttctgagagcgtatttcagctagaaaatt
tgatctgttctgataaaatctcgaaaattaattggctagaaataatgatg
tgttctgacgagacaggggtataatcaaggccATCTaatgtgttcttgtt
gtctaggtaacccagAACACATATTTTAAAGAGCCAGGGGTATATAATCA
AGAGGAAATAGttgtaatcttgttgcctagtaaccctagaaattttcaga
acacatctttcgtggagaaaacaaatatcttacaagtatatCTTGGTAAA
atgttttcctagattttagaacacatcaaggccataaagtagtaaaaagt
ttagggagacaaatattgcgataaaggtttcttagaaatcagaacacatt
atttgtataaaaaattgaaggtcgtaacatgtggtctcctagaagataag
aacacatatttccaaaaaaaatctccgccggctgcttcttTACTATCCAG
AAAAATCTATAAGAAACAAATTCCTTGGCAAAACTAACTATTTCTGTAGA
AAgccatttgtttttaaaaagtcaGTATTTATACGAGTGAAGACTTTTTG
AGTATAGTATTTctaaatcaatgtttttttcttttttaagctgACACGTT
GAAATCCAGATGGAGAAACCTGAAAGATGCCTTCACTAGAGCCTGTAGAA
AGCGGACGGAATACTTTAAATCAGGAAGACCGAGTGGCAAAATACCCTCC
TGTCAACACTTTGACCTTCTCCTTTTTATGAAAGATAGTGTATCGAACAA
GTCAAACAAAGGATCTAACTACATCTCTCAAGAACCAGATTTTTCTCAAT
CACAGATGAATTCATCATCTACGCTTAACCTGCCAAGTCCGATATTCGAG
TATAATCACACATCTACAACTCAAAGTTCCCCGTTTGGACTCACTCCACC
AGCTGGCCTTCAAAGCCCCACCGGAATCGTTCAGAGTTCGACTTCAGGTC
TGCCAAACCCCTCGACTGCTTTACAATACACACCAACCGACACAACTGAA
CCTCAAAACACTTCGTCTATACTTTCAAAATCGGTTAGTAATAACTTTTC
GAAGTCTGGGCCCAAGGGACGTGCACGGGAGAAACGCAGAATTGAAGATC
GTCGGGATAGCATAGACACTTTGCTGGTCAAAACCCTGGCTTCGACTTGT
GATGGTAGCACTAAAGAAAACGTTTCCCCTCGAAAAAAAGATTCCGGCGA
TATGCTATTTTGTAAGAGTTTAGCACCAATCTTAGAAAAATtgccaaaga
aaaaaaatcggaaaGCTAGAATAAAGATACAAGAAGTGCTCTATGAACTT
GAAAGTGACTCCGAGTGAACTTGGAAGTATGAGATGATTTTAAAAACTAG
TTTTTTATTTAGAGAATCTTTTAGTGAAACATACATTGCACCGTTTTGAa
ataaaagctaaaaaatattaaaactgTTACATCTACTCATTGTCTTCGGC
TCCTGTACTTCTGACTCTCCTTAATTGCCATGAAACAGATCCTGAGGGGC
TATTGAAATAAGTACAAAAGTCATCTCTGACCTCTTTCGCACTTTTCTTA
TAGTTGTTTGAACACCCCATATTTACAATGTTATCTAGACCTTCGTTAGC
TTGCTCAGCTCGCCAATCTCCTGGAATGATATTTCCGTTATGCTCACGAT
CAACATAGTTAGGAGGGCAATAGTTATTACAACTCTCGTTAGAAGTGTGA
ATCAGAAAATTGTGCAAAGCCACTATAGCCTTTGTAGCTTCCTCTGCAAT
TTCAACAGATGCAGCTATTGGTCTGCTAAATAATCTGAAACGAGATGTAG
CTATCCCAAATGCATTTTCGACGACCCGTCTTGCTCGAGATATGCGATAA
TTTGCAACAACCTTCTTTTCTTGTGGATCACTTCGAGGATAAGGTTTTAT
CAAATTTGAACGCAAGGGAAAAGCCTCGTCTCCTAAGAATACATAAGGAA
AGTACTTATTTGAGCCGTTTAACTTTCTTGGATTTGGTAAGTCAAAATCA
TCATTTGTAATTGCACATCCAAATTCTGAGTTTGCAAATATTCCTCCGTC
GCTTATCCTTCCATAGTCACCAACATCAACGAGAATGAATTGGTATCTGG
CATTAGCAACGGCCATTAAAACAATACTAAAATACTTTTTGTAATTGAAA
TAAAGGGAACCAGTCCCCTTAGGGCATTGAATTCGAACATGTTTACCGTC
AATTGCTCCAATACAATTTGGGAAATTCCATAAAGCTTCGAAATCGTTGG
CTATTTTTCTCCAATCTTTCTTGGACTTTGGTGATTCGATAAAACCTTTT
GATAGTAACACTTCCCAAATAGCTCTGCAGGTCTCTTTCACTATTCGAGA
AACGGATGTTTCACTCACTCTGTAACTGGCTGCGATAGTGCAAAAGGCGT
CACCTGAGATAAGATATCGTAACGTTACGGAGAGTCGTTCAGCAGGATCG
ATAGGCTCGCGACGAATACTGCACTTTTTTATCAGAGGACCAACCCAACT
CAGCAGTAATTCATATCTTTTTGGGGTCATTCTGAACATCTTAAAAAAGT
ATTCCTGGTCAAAAAGCGCAGCTTCTTTGACCAGGCAATGAAACTCTCCT
CTGGCTTTTCTCATTTTGTATATGTCTCTTATCCAAAATCGAGATGTtct
ttttttcgttctttcttgCAACCTTCTTCTTAAAATCAGTAGAAGCAAAA
CTCTCTTGTTGATAGCCGCCATCTTATTTgcttatgttttgatttttttt
tacgcgccacttttttataattttcagtGGAAGGATAAAAGCGCTCTGCG
CACAATGCGCTCGAGCCGTGCGCATTGAGCGGCGACCAAAAAAGGCTAAG
TGGACTACGACCTTTAAAATCATTGACATTTGTCTAAAAAATTGTAAAgg
aaaaaaatagcatttttagtTCATATTTCCTGAAGAAAATAGGTTGCTTA
GTCAACCTTTCTTAAGTTAAACTATTATGGGGGACAATGCAAAAAATTAC
AGGCCGATAGATGTCTCCTGTGGCTGGCACTTTTGATTTTAGTATTCCCG
GTAAAAAGATTTGCTGTGCCGCAAACAAGAAGTTAAAAAAGCGCACCTGG
GTAACcaattttaaatattaaaataatgaaaagtcTTACTGTGAGATtgg
ataacttgcatcagtggagggtaacATGCAtataaaaaaagatcaaatga
tCATATTGTAAACTGACAGTTTTCAAtacttgaaaaaataaaataataaa
gaaataaaaaggaaGTAAAATTTCAATCCTTAAGACCGAACAGAACATTC
CATTTTTCAGAAACTGTCATCAaatgacaatcaaacaaaggattttctgt
caagaaccttgtctacattccaacaacttctaTCGAAATGATCTGCCAAA
GCTAAGTTCtaccattttaaattatttgaaaaccaCATGTGCTGTTTGAG
GCAACTCCATGTAACATGTATTTTTGAGCCACCGGATCAGTTATTTGCCA
CAGTATCATTTAAAAATTGCCTAAATCAGCCCAAGGTTACTGTCTTAGTT
ATAATGATTGGAAAGacctaaatttcaaattttgacaactGTTAGGTATT
GATAATACAAGCGTAAAATACCAATCAGATAGTTGGCCTCCAATTATCCA
TATCTACATTTGGTTTAATATTTCATGTtcatagcacttgtcaatcttga
gatttttAACCCCTAGTCCCCCTAgtgaaaaaatagaaagatgctcgaag
ggttaacATTTGACAAGAAGCTTTCAACTTTCTGTAACTTTTTACCTTTC
TTGTTGTCGATCTTCTATTAATCCTGACGTCTTTTGATACTATTTATATG
AATTATTCTTTCGTCCTAGCCCTTCATTATATTCTAACAGGCTTCGGTTT
CGTTCTTAACTCGCTCTatatatttttgatgtttcaCAGGATTTCACTTA
GATTGTATCTTTCCATTGTCGTGTATTGCCATTGAAGTTGTATTTTTACA
AAACCACGCATGAAAGTTTTCGTCACATTTAGCTTCTCAAACATGTTTCA
TCATTGTTCTTCTAGAATGGGAAGCGTTGTTACAAAGTGCAATGGAAGGA
GAGCTGGGTTTTCGAAGATCATCTCTTCAGCTGTAAACCTTTAGTGGAGA
AGTTTTGGAAGAACCAAAAGCAAGACCCTTCTACTGCAATCACTATTTCT
CAAAATGTAAGAAGACCCTTACATTCTTGTAACAATCTCTTTTTATTGAA
TTAAGAAAATCTCTTTATTGTCTGCTAATGATTCCCCTCACGGAAAAACT
ACTTCAtcaagatttgtctgtttttaGTGTTCAGTTATAATTTTAACTGT
GATTGTACGATTTTCAGATATAATACTATTTGGTTGTTCTAACCTCTTTC
TCTTTTCTATCAAGACGGAGCCAACGACGCGAGGAACGAAGCGAGCTGCG
AAAGGAGGAGGGGGGAAGAAGAACATGAAAGTGATCGTTATTTCCAACAA
AGAGAAGAAAGATGGTGAAGATGTAGTACAACAAACACAACACGTTGACA
ATGAGGAGGCTATCACAAATACTGATGACATTGACGGTGACTGGATATTA
GGTATCTTTCTGTCTTGtgtaaaatttatatttccCTAATACCTAAAAGC
TATTTCATCATGATGGATGACTTCATTACTTTGACAGAATACAAATTTGA
AGTTTCTGCTGGTTTTTGAAGTAACAGTTATTTAGAATGAAAACTATTTT
CTTAATCAAATAATGTATACTTAAGCAGGAAACTTcgaatattgaaaaga
agtaaaccgtttctttcatttttatgtaGAATAAGAATTATAAACCttgt
tccctgcgtattattggttttttgatgcttactgaaaACACCAGATAATA
TTCTTCAGCGTCCGTCAATAACGTAAATAAGACCTGGGATAAATGGGGGA
CGAGGCTGGTCACCGACAACAAAATGCATTTCATACATGATTTAATCGGA
TGCACTGTAAAATCTCTTTCAAATTATTAACGGcgtatcttttttcaatt
ttttcttacagATGGTTTAAACCAAGACGACGACAGTTCTAAAGAAAACG
ATAATTCCTGGTTCGTCACGGCCGAAATGAAGAAGATTCGGCCTACTGGC
GCAAAGTATACGCTTTCATGTCATATCTGTCCTAATGAGGAATTCGAAGC
TGTTTCGACGTTTAGAAGACATTACATAACAATGCATCCAGGTGTGAAGG
CCTTCTCTTGCGATGTCTGCCAGAAACGTTTCGATCGTAAAGAAAACTTG
ATGAGACATATTCGAATACATACGGGCGATCGAAGAtatatttgtaattt
ttgcgGCAAAGGATACACTGATCCTTCAGGTTTGAAAAAGCACGTGAATG
CGAAACACGCTAATgagaaaaagatattcaaatgtGATATTTGTCAAGAT
ACGTTCCCTAATAAAGTCATCTTAGATAAACATTATGTGCAGCACGATGC
GTCGACAGACCCCGCTCTGAATACGGAGCCGTCAGATGGAGAACATATAC
AACACGAGGGGAGAGAAAGTGGCGAGGATACTTTAGAACTTCACACAGAT
AGTGAAATCTCTGCTATTCAGAAATCGAATTTGTTAGAAACGAGTATGGA
CCAATCAGAAGTCGTCACTGATGATGAAACAACCACCATCGAAGTGTTGA
TGGAAAAATCTCCAGAAAACTTAAGTTCTTCCACAACAAATAGTGTTGTT
CCAACCACGAACATTCTTGAAGCGACAGATATCAAAGACACTGAGCAACC
CATGCAAAACGTTGTGAAACAGCTGCAACAGTTTGTTGACGAACAAGTTG
TGCAGTACGTCCAAGTTACGAACACGGCAGAACAGACACAATCGCAACCT
GTCACTCTTAACTCTCCGACTCTTCACCATCATCAACCAAAAACATTCAT
ATTTAATGACGCAACGGCGCCTGATCAGCAATCACATTTCGTTATTCCGA
TATCGGCGCCTCAACTTTTGATTAACCCGGCAGGTGGTCAGAACAATTTA
CGGCAAGTATTACCAGCCGTTTCGAATCATCAACAACAAATCATAACTGT
CCCTTTGACGCCTTCTTCTTTTGTTTACACTGGACCTTTAACTCCACACC
ACCCACCGCCACAAACTTCAAATGATTCTTTACTTTCTGATGGGACGTAA
AAACGATACAGTGTGGCCTAAATAAAGCGATT Coding sequence (CDS) from alignment at sc0000078:119679..129910+ >TCONS_00007550 ID=TCONS_00007550|Name=TCONS_00007550|organism=Clytia hemisphaerica|type=CDS|length=6168bp|location=Sequence derived from alignment at sc0000078:119679..129910+ (Clytia hemisphaerica)
ATGGAACAAGATGTACCAAGAGCTGCGCTAGCAGTTATGGAGATAGAAAA
CATACTTGCTGCTAGTTTTGGGGAGAATGGGAAGCGTTGTTACAAAGTGC
AATGGAAGGAGAGCTGGGTTTTCGAAGATCATCTCTTCAGCTGTAAACCT
TTAGTGGAGAAGTTTTGGAAGAACCAAAAGCAAGACCCTTCTACTGCAAT
CACTATTTCTCAAAATACGGAGCCAACGACGCGAGGAACGAAGCGAGCTG
CGAAAGGAGGAGGGGGGAAGAAGAACATGAAAGTGATCGTTATTTCCAAC
AAAGAGAAGAAAGATGGTGAAGATGTAGTACAACAAACACAACACGTTGA
CAATGAGGAGGCTATCACAAATACTGATGACATTGACGGTGACTGGATAT
TAGATGGTTTAAACCAAGACGACGACAGTTCTAAAGAAAACGATAATTCC
TGGTTCGTCACGGCCGAAATGAAGAAGATTCGGCCTACTGGCGCAAAGTA
TACGCTTTCATGTCATATCTGTCCTAATGAGGAATTCGAAGCTGTTTCGA
CGTTTAGAAGACATTACATAACAATGCATCCAGGTGTGAAGGCCTTCTCT
TGCGATGTCTGCCAGAAACGTTTCGATCGTAAAGAAAACTTGATGAGACA
TATTCGAATACATACGGGCGATCGAAGAtatatttgtaatttttgcgGCA
AAGGATACACTGATCCTTCAGGTTTGAAAAAGCACGTGAATGCGAAACAC
GCTAATgagaaaaagatattcaaatgtGATATTTGTCAAGATACGTTCCC
TAATAAAGTCATCTTAGATAAACATTATGTGCAGCACGATGCGTCGACAG
ACCCCGCTCTGAATACGGAGCCGTCAGATGGAGAACATATACAACACGAG
GGGAGAGAAAGTGGCGAGGATACTTTAGAACTTCACACAGATAGTGAAAT
CTCTGCTATTCAGAAATCGAATTTGTTAGAAACGAGTATGGACCAATCAG
AAGTCGTCACTGATGATGAAACAACCACCATCGAAGTGTTGATGGAAAAA
TCTCCAGAAAACTTAAGTTCTTCCACAACAAATAGTGTTGTTCCAACCAC
GAACATTCTTGAAGCGACAGATATCAAAGACACTGAGCAACCCATGCAAA
ACGTTGTGAAACAGCTGCAACAGTTTGTTGACGAACAAGTTGTGCAGTAC
GTCCAAGTTACGAACACGGCAGAACAGACACAATCGCAACCTGTCACTCT
TAACTCTCCGACTCTTCACCATCATCAACCAAAAACATTCATATTTAATG
ACGCAACGGCGCCTGATCAGCAATCACATTTCGTTATTCCGATATCGGCG
CCTCAACTTTTGATTAACCCGGCAGGTGGTCAGAACAATTTACGGCAAGT
ATTACCAGCCGTTTCGAATCATCAACAACAAATCATAACTGTCCCTTTGA
CGCCTTCTTCTTTTGTTTACACTGGACCTTTAACTCCACACCACCCACCG
CCACAAACTTCAAATGATTCTTTACTTTCTGATGGGACGTAAATGGAACA
AGATGTACCAAGAGCTGCGCTAGCAGTTATGGAGATAGAAAACATACTTG
CTGCTAGTTTTGGGGAGAATGGGAAGCGTTGTTACAAAGTGCAATGGAAG
GAGAGCTGGGTTTTCGAAGATCATCTCTTCAGCTGTAAACCTTTAGTGGA
GAAGTTTTGGAAGAACCAAAAGCAAGACCCTTCTACTGCAATCACTATTT
CTCAAAATACGGAGCCAACGACGCGAGGAACGAAGCGAGCTGCGAAAGGA
GGAGGGGGGAAGAAGAACATGAAAGTGATCGTTATTTCCAACAAAGAGAA
GAAAGATGGTGAAGATGTAGTACAACAAACACAACACGTTGACAATGAGG
AGGCTATCACAAATACTGATGACATTGACGGTGACTGGATATTAGATGGT
TTAAACCAAGACGACGACAGTTCTAAAGAAAACGATAATTCCTGGTTCGT
CACGGCCGAAATGAAGAAGATTCGGCCTACTGGCGCAAAGTATACGCTTT
CATGTCATATCTGTCCTAATGAGGAATTCGAAGCTGTTTCGACGTTTAGA
AGACATTACATAACAATGCATCCAGGTGTGAAGGCCTTCTCTTGCGATGT
CTGCCAGAAACGTTTCGATCGTAAAGAAAACTTGATGAGACATATTCGAA
TACATACGGGCGATCGAAGAtatatttgtaatttttgcgGCAAAGGATAC
ACTGATCCTTCAGGTTTGAAAAAGCACGTGAATGCGAAACACGCTAATga
gaaaaagatattcaaatgtGATATTTGTCAAGATACGTTCCCTAATAAAG
TCATCTTAGATAAACATTATGTGCAGCACGATGCGTCGACAGACCCCGCT
CTGAATACGGAGCCGTCAGATGGAGAACATATACAACACGAGGGGAGAGA
AAGTGGCGAGGATACTTTAGAACTTCACACAGATAGTGAAATCTCTGCTA
TTCAGAAATCGAATTTGTTAGAAACGAGTATGGACCAATCAGAAGTCGTC
ACTGATGATGAAACAACCACCATCGAAGTGTTGATGGAAAAATCTCCAGA
AAACTTAAGTTCTTCCACAACAAATAGTGTTGTTCCAACCACGAACATTC
TTGAAGCGACAGATATCAAAGACACTGAGCAACCCATGCAAAACGTTGTG
AAACAGCTGCAACAGTTTGTTGACGAACAAGTTGTGCAGTACGTCCAAGT
TACGAACACGGCAGAACAGACACAATCGCAACCTGTCACTCTTAACTCTC
CGACTCTTCACCATCATCAACCAAAAACATTCATATTTAATGACGCAACG
GCGCCTGATCAGCAATCACATTTCGTTATTCCGATATCGGCGCCTCAACT
TTTGATTAACCCGGCAGGTGGTCAGAACAATTTACGGCAAGTATTACCAG
CCGTTTCGAATCATCAACAACAAATCATAACTGTCCCTTTGACGCCTTCT
TCTTTTGTTTACACTGGACCTTTAACTCCACACCACCCACCGCCACAAAC
TTCAAATGATTCTTTACTTTCTGATGGGACGTAAATGGAACAAGATGTAC
CAAGAGCTGCGCTAGCAGTTATGGAGATAGAAAACATACTTGCTGCTAGT
TTTGGGGAGAATGGGAAGCGTTGTTACAAAGTGCAATGGAAGGAGAGCTG
GGTTTTCGAAGATCATCTCTTCAGCTGTAAACCTTTAGTGGAGAAGTTTT
GGAAGAACCAAAAGCAAGACCCTTCTACTGCAATCACTATTTCTCAAAAT
ACGGAGCCAACGACGCGAGGAACGAAGCGAGCTGCGAAAGGAGGAGGGGG
GAAGAAGAACATGAAAGTGATCGTTATTTCCAACAAAGAGAAGAAAGATG
GTGAAGATGTAGTACAACAAACACAACACGTTGACAATGAGGAGGCTATC
ACAAATACTGATGACATTGACGGTGACTGGATATTAGATGGTTTAAACCA
AGACGACGACAGTTCTAAAGAAAACGATAATTCCTGGTTCGTCACGGCCG
AAATGAAGAAGATTCGGCCTACTGGCGCAAAGTATACGCTTTCATGTCAT
ATCTGTCCTAATGAGGAATTCGAAGCTGTTTCGACGTTTAGAAGACATTA
CATAACAATGCATCCAGGTGTGAAGGCCTTCTCTTGCGATGTCTGCCAGA
AACGTTTCGATCGTAAAGAAAACTTGATGAGACATATTCGAATACATACG
GGCGATCGAAGAtatatttgtaatttttgcgGCAAAGGATACACTGATCC
TTCAGGTTTGAAAAAGCACGTGAATGCGAAACACGCTAATgagaaaaaga
tattcaaatgtGATATTTGTCAAGATACGTTCCCTAATAAAGTCATCTTA
GATAAACATTATGTGCAGCACGATGCGTCGACAGACCCCGCTCTGAATAC
GGAGCCGTCAGATGGAGAACATATACAACACGAGGGGAGAGAAAGTGGCG
AGGATACTTTAGAACTTCACACAGATAGTGAAATCTCTGCTATTCAGAAA
TCGAATTTGTTAGAAACGAGTATGGACCAATCAGAAGTCGTCACTGATGA
TGAAACAACCACCATCGAAGTGTTGATGGAAAAATCTCCAGAAAACTTAA
GTTCTTCCACAACAAATAGTGTTGTTCCAACCACGAACATTCTTGAAGCG
ACAGATATCAAAGACACTGAGCAACCCATGCAAAACGTTGTGAAACAGCT
GCAACAGTTTGTTGACGAACAAGTTGTGCAGTACGTCCAAGTTACGAACA
CGGCAGAACAGACACAATCGCAACCTGTCACTCTTAACTCTCCGACTCTT
CACCATCATCAACCAAAAACATTCATATTTAATGACGCAACGGCGCCTGA
TCAGCAATCACATTTCGTTATTCCGATATCGGCGCCTCAACTTTTGATTA
ACCCGGCAGGTGGTCAGAACAATTTACGGCAAGTATTACCAGCCGTTTCG
AATCATCAACAACAAATCATAACTGTCCCTTTGACGCCTTCTTCTTTTGT
TTACACTGGACCTTTAACTCCACACCACCCACCGCCACAAACTTCAAATG
ATTCTTTACTTTCTGATGGGACGTAAATGGAACAAGATGTACCAAGAGCT
GCGCTAGCAGTTATGGAGATAGAAAACATACTTGCTGCTAGTTTTGGGGA
GAATGGGAAGCGTTGTTACAAAGTGCAATGGAAGGAGAGCTGGGTTTTCG
AAGATCATCTCTTCAGCTGTAAACCTTTAGTGGAGAAGTTTTGGAAGAAC
CAAAAGCAAGACCCTTCTACTGCAATCACTATTTCTCAAAATACGGAGCC
AACGACGCGAGGAACGAAGCGAGCTGCGAAAGGAGGAGGGGGGAAGAAGA
ACATGAAAGTGATCGTTATTTCCAACAAAGAGAAGAAAGATGGTGAAGAT
GTAGTACAACAAACACAACACGTTGACAATGAGGAGGCTATCACAAATAC
TGATGACATTGACGGTGACTGGATATTAGATGGTTTAAACCAAGACGACG
ACAGTTCTAAAGAAAACGATAATTCCTGGTTCGTCACGGCCGAAATGAAG
AAGATTCGGCCTACTGGCGCAAAGTATACGCTTTCATGTCATATCTGTCC
TAATGAGGAATTCGAAGCTGTTTCGACGTTTAGAAGACATTACATAACAA
TGCATCCAGGTGTGAAGGCCTTCTCTTGCGATGTCTGCCAGAAACGTTTC
GATCGTAAAGAAAACTTGATGAGACATATTCGAATACATACGGGCGATCG
AAGAtatatttgtaatttttgcgGCAAAGGATACACTGATCCTTCAGGTT
TGAAAAAGCACGTGAATGCGAAACACGCTAATgagaaaaagatattcaaa
tgtGATATTTGTCAAGATACGTTCCCTAATAAAGTCATCTTAGATAAACA
TTATGTGCAGCACGATGCGTCGACAGACCCCGCTCTGAATACGGAGCCGT
CAGATGGAGAACATATACAACACGAGGGGAGAGAAAGTGGCGAGGATACT
TTAGAACTTCACACAGATAGTGAAATCTCTGCTATTCAGAAATCGAATTT
GTTAGAAACGAGTATGGACCAATCAGAAGTCGTCACTGATGATGAAACAA
CCACCATCGAAGTGTTGATGGAAAAATCTCCAGAAAACTTAAGTTCTTCC
ACAACAAATAGTGTTGTTCCAACCACGAACATTCTTGAAGCGACAGATAT
CAAAGACACTGAGCAACCCATGCAAAACGTTGTGAAACAGCTGCAACAGT
TTGTTGACGAACAAGTTGTGCAGTACGTCCAAGTTACGAACACGGCAGAA
CAGACACAATCGCAACCTGTCACTCTTAACTCTCCGACTCTTCACCATCA
TCAACCAAAAACATTCATATTTAATGACGCAACGGCGCCTGATCAGCAAT
CACATTTCGTTATTCCGATATCGGCGCCTCAACTTTTGATTAACCCGGCA
GGTGGTCAGAACAATTTACGGCAAGTATTACCAGCCGTTTCGAATCATCA
ACAACAAATCATAACTGTCCCTTTGACGCCTTCTTCTTTTGTTTACACTG
GACCTTTAACTCCACACCACCCACCGCCACAAACTTCAAATGATTCTTTA
CTTTCTGATGGGACGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007550-exon-sc0000078-1491911889:119679..119903 | TCONS_00007550-exon-sc0000078-1491911889:119679..119903 | Clytia hemisphaerica | exon |
| TCONS_00007550-exon-sc0000078-1510915933:119679..119903 | TCONS_00007550-exon-sc0000078-1510915933:119679..119903 | Clytia hemisphaerica | exon |
| TCONS_00007550-exon-sc0000078-1575043694:119679..119903 | TCONS_00007550-exon-sc0000078-1575043694:119679..119903 | Clytia hemisphaerica | exon |
| TCONS_00007550-exon-sc0000078-1491911889:127744..127884 | TCONS_00007550-exon-sc0000078-1491911889:127744..127884 | Clytia hemisphaerica | exon |
| TCONS_00007550-exon-sc0000078-1510915933:127744..127884 | TCONS_00007550-exon-sc0000078-1510915933:127744..127884 | Clytia hemisphaerica | exon |
| TCONS_00007550-exon-sc0000078-1575043694:127744..127884 | TCONS_00007550-exon-sc0000078-1575043694:127744..127884 | Clytia hemisphaerica | exon |
| TCONS_00007550-exon-sc0000078-1491911889:128093..128279 | TCONS_00007550-exon-sc0000078-1491911889:128093..128279 | Clytia hemisphaerica | exon |
| TCONS_00007550-exon-sc0000078-1510915933:128093..128279 | TCONS_00007550-exon-sc0000078-1510915933:128093..128279 | Clytia hemisphaerica | exon |
| TCONS_00007550-exon-sc0000078-1575043694:128093..128279 | TCONS_00007550-exon-sc0000078-1575043694:128093..128279 | Clytia hemisphaerica | exon |
| TCONS_00007550-exon-sc0000078-1491911889:128740..129910 | TCONS_00007550-exon-sc0000078-1491911889:128740..129910 | Clytia hemisphaerica | exon |
| TCONS_00007550-exon-sc0000078-1510915933:128740..129910 | TCONS_00007550-exon-sc0000078-1510915933:128740..129910 | Clytia hemisphaerica | exon |
| TCONS_00007550-exon-sc0000078-1575043694:128740..129910 | TCONS_00007550-exon-sc0000078-1575043694:128740..129910 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078 | supercontig | sc0000078:119679..129910 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003676 |
nucleic acid binding |
Blast
BLAST of TCONS_00007550 vs. Swiss-Prot (Human)
Match: VEZF1 (Vascular endothelial zinc finger 1 OS=Homo sapiens GN=VEZF1 PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 2.646e-16 Identity = 41/114 (35.96%), Postives = 59/114 (51.75%), Query Frame = 1
Query: 658 SCHICPNEEFEAVSTFRRHYITMHPGVKAFSCDVCQKRFDRKENLMRHIRIHTGD--RRYICNFCGKGYTDPSGLKKHVNAKHANEKKIFKCDICQDTFPNKVILDKHYVQHDA 993
+C +C + F V RH ++ H K F C +C +RF RK+ + H+R H G + Y C+ CGKG++ P L HV H+ E+ FKC C F K L H V+H+
Sbjct: 175 ACEMC-GKAFRDVYHLNRHKLS-HSDEKPFECPICNQRFKRKDRMTYHVRSHEGGITKPYTCSVCGKGFSRPDHLSCHVKHVHSTERP-FKCQTCTAAFATKDRLRTHMVRHEG 285
The following BLAST results are available for this feature:
|
