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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007530 ID=TCONS_00007530|Name=TCONS_00007530|organism=Clytia hemisphaerica|type=transcript|length=1298bp CTTACACTTTTAGTAAATCACAAAACTGCTGTCAAATTTATTTCAGACCC ACGGTACTCAAGATTCTCTGTTTTTCAACAGTCTCAGATCTTGGATACAA AGGGTCATCAGTTACCAAAAATCCATGGCAAACATTTAGCTTATAACCTT CAAATACTTGATAACCGTATTGATCTGTTGGGTGACTCTGACCGGAGTGA TATCCGTAAGAGGGCATGCCGTAACGAAGATTTGTGTTTATAGTACGGGC CGTAATCGCATCAGCAATGCCACGACGTCTGTGTTCAGGATACGTATACA TACGTTCTTGAACACCATTTGAAGAAATAGTCATCCACCCAACAATCTCG TTTGTTTGTTTATGATACGCTCCTATCGTCATCTNTTCTTGAACACCATT TGAGGAAATAGTCATCCACCCAACAATCTCGTTTGTTTGTTTATGGTACG CTCCTATCGTCATCCGGTTCTGTATAGCAAATCGAATTTCATCTTGAATC AATATTGGTTGAAAATGTTTGATCTTGGTATGGAAATCATTCATGTTGCA AAAACCAATACGGTAATTTTCCAATTCTTGTTCAACAGCTTCGTCTTGGA TGTTTGTATTCCTGTATGTTAAGAATATAGGTTCCTCAAAAGAGCTTTGT GGAGGAAATCCAGTTGCAATGAGTAATTGATCAACGATACGTTGGTCTGT CTCTTGTATGCCTTGACCTTTCTGGTAAACTGATAACAAATCGTTGAAAT CAGAATCAGTGAGTTGGTCAAAATCCTTGCACCAGACTTGGTAAACATGC TCATATCCCATTTCCTCCGTATTTGGTTTACAAGTGAGATCATTTATTTG ATACCCAACTAAAGGGCTTTTAAGCATGATTTTGGTGCTTTTCTCAGCAT ATGCGTGATCAGAGTAAATCTCAACGAACTGCTTGAAGTAAGGATGTGAG AGGCTGCCAATAACAGGGATGACAGATGGATCAGTTCTGGAGCACCGCCA TAAACCTTGCAGGAAAGAGTTTCTCAAACTTCCAGTAATAGACTTCAATT TCAACATTCTCATTTTCGTAAGTCTTTGATTGCGTTAAAATCCCTCATAA TAATAACAACGGTTTATAGATAGACGGTAAAGCTTTTCACGAGAGAGCCA CCAATCTTGTATTTTTGTGGTTAAAATGTCAAAGTGCAAAGGACTTGCAG CTGCTATGCGTGTTACATCTGTGTTGAATATCTATCAATTCTATAAGACA ATTCTATAAGTGCAACTTTACACATGATTAACGAGAGCTCGAGAGTTG Run BLAST on NCBI protein sequence of TCONS_00007530-protein >TCONS_00007530-protein ID=TCONS_00007530-protein|Name=TCONS_00007530-protein|organism=Clytia hemisphaerica|type=polypeptide|length=341bp
MRMLKLKSITGSLRNSFLQGLWRCSRTDPSVIPVIGSLSHPYFKQFVEIY SDHAYAEKSTKIMLKSPLVGYQINDLTCKPNTEEMGYEHVYQVWCKDFDQ LTDSDFNDLLSVYQKGQGIQETDQRIVDQLLIATGFPPQSSFEEPIFLTY RNTNIQDEAVEQELENYRIGFCNMNDFHTKIKHFQPILIQDEIRFAIQNR MTIGAYHKQTNEIVGWMTISSNGVQEXMTIGAYHKQTNEIVGWMTISSNG VQERMYTYPEHRRRGIADAITARTINTNLRYGMPSYGYHSGQSHPTDQYG YQVFEGYKLNVCHGFLVTDDPLYPRSETVEKQRILSTVGLK Run BLAST on NCBI transcript from alignment at sc0000077:720080..721377 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007530 ID=TCONS_00007530|Name=TCONS_00007530|organism=Clytia hemisphaerica|type=transcript|length=1298bp|location=Sequence derived from alignment at sc0000077:720080..721377 (Clytia hemisphaerica) CAACTCTCGAGCTCTCGTTAATCATGTGTAAAGTTGCACTTATAGAATTG
TCTTATAGAATTGATAGATATTCAACACAGATGTAACACGCATAGCAGCT
GCAAGTCCTTTGCACTTTGACATTTTAACCACAAAAATACAAGATTGGTG
GCTCTCTCGTGAAAAGCTTTACCGTCTATCTATAAACCGTTGTTATTATT
ATGAGGGATTTTAACGCAATCAAAGACTTACGAAAATGAGAATGTTGAAA
TTGAAGTCTATTACTGGAAGTTTGAGAAACTCTTTCCTGCAAGGTTTATG
GCGGTGCTCCAGAACTGATCCATCTGTCATCCCTGTTATTGGCAGCCTCT
CACATCCTTACTTCAAGCAGTTCGTTGAGATTTACTCTGATCACGCATAT
GCTGAGAAAAGCACCAAAATCATGCTTAAAAGCCCTTTAGTTGGGTATCA
AATAAATGATCTCACTTGTAAACCAAATACGGAGGAAATGGGATATGAGC
ATGTTTACCAAGTCTGGTGCAAGGATTTTGACCAACTCACTGATTCTGAT
TTCAACGATTTGTTATCAGTTTACCAGAAAGGTCAAGGCATACAAGAGAC
AGACCAACGTATCGTTGATCAATTACTCATTGCAACTGGATTTCCTCCAC
AAAGCTCTTTTGAGGAACCTATATTCTTAACATACAGGAATACAAACATC
CAAGACGAAGCTGTTGAACAAGAATTGGAAAATTACCGTATTGGTTTTTG
CAACATGAATGATTTCCATACCAAGATCAAACATTTTCAACCAATATTGA
TTCAAGATGAAATTCGATTTGCTATACAGAACCGGATGACGATAGGAGCG
TACCATAAACAAACAAACGAGATTGTTGGGTGGATGACTATTTCCTCAAA
TGGTGTTCAAGAANAGATGACGATAGGAGCGTATCATAAACAAACAAACG
AGATTGTTGGGTGGATGACTATTTCTTCAAATGGTGTTCAAGAACGTATG
TATACGTATCCTGAACACAGACGTCGTGGCATTGCTGATGCGATTACGGC
CCGTACTATAAACACAAATCTTCGTTACGGCATGCCCTCTTACGGATATC
ACTCCGGTCAGAGTCACCCAACAGATCAATACGGTTATCAAGTATTTGAA
GGTTATAAGCTAAATGTTTGCCATGGATTTTTGGTAACTGATGACCCTTT
GTATCCAAGATCTGAGACTGTTGAAAAACAGAGAATCTTGAGTACCGTGG
GTCTGAAATAAATTTGACAGCAGTTTTGTGATTTACTAAAAGTGTAAG Coding sequence (CDS) from alignment at sc0000077:720080..721377 >TCONS_00007530 ID=TCONS_00007530|Name=TCONS_00007530|organism=Clytia hemisphaerica|type=CDS|length=1026bp|location=Sequence derived from alignment at sc0000077:720080..721377 (Clytia hemisphaerica) ATGAGAATGTTGAAATTGAAGTCTATTACTGGAAGTTTGAGAAACTCTTT CCTGCAAGGTTTATGGCGGTGCTCCAGAACTGATCCATCTGTCATCCCTG TTATTGGCAGCCTCTCACATCCTTACTTCAAGCAGTTCGTTGAGATTTAC TCTGATCACGCATATGCTGAGAAAAGCACCAAAATCATGCTTAAAAGCCC TTTAGTTGGGTATCAAATAAATGATCTCACTTGTAAACCAAATACGGAGG AAATGGGATATGAGCATGTTTACCAAGTCTGGTGCAAGGATTTTGACCAA CTCACTGATTCTGATTTCAACGATTTGTTATCAGTTTACCAGAAAGGTCA AGGCATACAAGAGACAGACCAACGTATCGTTGATCAATTACTCATTGCAA CTGGATTTCCTCCACAAAGCTCTTTTGAGGAACCTATATTCTTAACATAC AGGAATACAAACATCCAAGACGAAGCTGTTGAACAAGAATTGGAAAATTA CCGTATTGGTTTTTGCAACATGAATGATTTCCATACCAAGATCAAACATT TTCAACCAATATTGATTCAAGATGAAATTCGATTTGCTATACAGAACCGG ATGACGATAGGAGCGTACCATAAACAAACAAACGAGATTGTTGGGTGGAT GACTATTTCCTCAAATGGTGTTCAAGAANAGATGACGATAGGAGCGTATC ATAAACAAACAAACGAGATTGTTGGGTGGATGACTATTTCTTCAAATGGT GTTCAAGAACGTATGTATACGTATCCTGAACACAGACGTCGTGGCATTGC TGATGCGATTACGGCCCGTACTATAAACACAAATCTTCGTTACGGCATGC CCTCTTACGGATATCACTCCGGTCAGAGTCACCCAACAGATCAATACGGT TATCAAGTATTTGAAGGTTATAAGCTAAATGTTTGCCATGGATTTTTGGT AACTGATGACCCTTTGTATCCAAGATCTGAGACTGTTGAAAAACAGAGAA TCTTGAGTACCGTGGGTCTGAAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00007530-exon-sc0000077-1491911889:720080..721377 | TCONS_00007530-exon-sc0000077-1491911889:720080..721377 | Clytia hemisphaerica | exon |
TCONS_00007530-exon-sc0000077-1510915933:720080..721377 | TCONS_00007530-exon-sc0000077-1510915933:720080..721377 | Clytia hemisphaerica | exon |
TCONS_00007530-exon-sc0000077-1575043694:720080..721377 | TCONS_00007530-exon-sc0000077-1575043694:720080..721377 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000077 | supercontig | sc0000077:720080..721377 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
Term | Definition |
GO:0016747 | transferase activity, transferring acyl groups other than amino-acyl groups |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
molecular_function |
GO:0016747 |
transferase activity, transferring acyl groups other than amino-acyl groups |
Blast
The following BLAST results are available for this feature:
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