TCONS_00007386 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007386
Unique NameTCONS_00007386
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1220

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007386 ID=TCONS_00007386|Name=TCONS_00007386|organism=Clytia hemisphaerica|type=transcript|length=1220bp
TTTGAATAGAAAGACTGGAGAAACGAAGAGAAGGTTTGACTCGAAAAGAT
GAAGTCTctactttcgattttgattATTGGTACATTTTGTAGCATCGCTG
ATGTCTCTGGTGAATCTCAACAACGAATGTGCTTCTTTGGGAAAGGTAAC
ATCTGTGATAACGACTTGGCGGGATATTATGAATGCGACGGCAACGATCC
GTGGGGAAGATATCACAGAtgcgaaaaaaatcaaatgtgcTCATGTGGGA
TATTTCACCCATGTTCCAAAGATCAAACATTATGTGTCGATCGACCTGAA
TTTCGTGGTAGTGAAATTCCANTTCCAAAGATCAAACATTATGTGTTGAT
CGACCTGAATTTCGTGGTAGTGAAATTCCAGAAGATTTTACAGTGACTTT
TCATGGGAAACTCATTAATGGGTTACCTAATTCAGTTGAGACGCAATCCA
TATCTGGCAATATAAGACAATCACTTGAGAAAGGAAACTCTGTTCTTCGA
GAAGAAATTAAGTATAGATATGAAAATGGTACCGAGATGAAAGATGTTAT
TCGGATTACACAAGAAGAACACAGACTTCACTTTGGAAATGCAATTATTC
AGtacACTTACCTTAAAGACGCGAAGTCTGGTAACAAGTCATGCACTGTC
CGAAACACACGTGGTCAAGTCGATTTCTTTCACGATTTACGAAAACTCTC
ATACAGACAACAATTCAAAACTGACGAATACTTCTTCACAGATGGTCCCG
CCCGAAATCATGCCGCCTCCACCATAAAGAAATGGGCGTTCCGCCAATTC
CACCCTTCCCAACCAAAATGTCCGTCATCATTCTATAAGGTGAAACATGG
TAGCAACAACCATAAAGGAACCAAAGAAGAATTTATCAAGTTTCATTATT
TCTACCTGACAAGACCAAGACCAGATTATTTCAGACTACCAGCTGAATGT
TTGAAATTAATCCAATACCATGATGACCAGAAAAAACGCCAGTTAAATAA
CCTTGATGATGATAATGAAAAACGTGAAGAATTTAATGGAGAAAGAGCTG
CTGAAATTGAACGTGAACTTGAAATGGACTTTCATAAACTGTTTTAAAAA
ATCGTGTATTTGCAAAGTTAGCCTATAACGTTGTTTTTAACATTCATTGA
ACACGGACGTTAcgaacgttaaatgaacgttaaaAGAACGTTGTAGGGTG
ACTTCGGTAAAAAATTTTGT
Run BLAST on NCBI

protein sequence of TCONS_00007386-protein

>TCONS_00007386-protein ID=TCONS_00007386-protein|Name=TCONS_00007386-protein|organism=Clytia hemisphaerica|type=polypeptide|length=186bp
MKDVIRITQEEHRLHFGNAIIQYTYLKDAKSGNKSCTVRNTRGQVDFFHD
LRKLSYRQQFKTDEYFFTDGPARNHAASTIKKWAFRQFHPSQPKCPSSFY
KVKHGSNNHKGTKEEFIKFHYFYLTRPRPDYFRLPAECLKLIQYHDDQKK
RQLNNLDDDNEKREEFNGERAAEIERELEMDFHKLF
Run BLAST on NCBI

transcript from alignment at sc0000076:664056..680596+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007386 ID=TCONS_00007386|Name=TCONS_00007386|organism=Clytia hemisphaerica|type=transcript|length=16541bp|location=Sequence derived from alignment at sc0000076:664056..680596+ (Clytia hemisphaerica)
TTTGAATAGAAAGACTGGAGAAACGAAGAGAAGGTTTGACTCGAAAAGAT GAAGTCTctactttcgattttgattATTGGTACATTTTGTAGCATCGCTG ATGTCTCTGGTGAATCTCAACAACGAATGTGCTTCTTTGGGAAAGGTAAC ATCTGTGATAACGACTTGGCGGGATATTATGAATGCGACGGCAACGATCC GTGGGGAAGATATCACAGAtgcgaaaaaaatcaaatgtgcTCATGTGGGA TATTTCACCCATGTTCCAAAGATCAAACATTATGTGTCGATCGACCTGAA TTTCGTGGTAGTGAAATTCCANTTCCAAAGATCAAACATTATGTGTTGAT CGACCTGAATTTCGTGGTAGTGAAATTCCAGAAGATTTTACAGTGACTTT TCATGGGAAACTCATTAATGGGTTACCTAATTCAGTTGAGACGCAATCCA TATCTGGCAATATAAGACAATCACTTGAGAAAGGAAACTCTGTTCTTCGA GAAGAAATTAAGTATAGATATGAAAATGGTACCGAGATGAAAGATGTTAT TCGGATTACACAAGAAGAACACAGACTTCACTTTGGAAATGCAATTATTC AGGTAACATAATTTTTCGaataatttcaacttttttcaaccctctcagac tacacgttttttttataagaacatccaaaatttttgaaagccttcggatg ctcttaactttttgcccaattttaagcctaaaaatgttctcaacatgttc ttattttcaccagttTTTTGAGTAttcttgtccattttcctacGAAATTG AGTGTTCAAACAAAGcctcaaaatattcttaatttgtttttgACAATTTG GTCATTGAAGacatatgttcttatatagtttgttcttataaaaaacgttt acagTGATGGGTATCAAGGTCGCAGCTCaagactttaaagaaaaaaaggc tTAACAATGATACCTCGTGGATTTTTACATTAGCTCTTGCCTTTATGACT ATATGGCTACAGAGCATTTATGACTAATAATACAGCTTTAATATTTATGG TCTACACGGGAAAAACAAATCATTAGTGAATCTTATGTATTTTGATAATT ATCAGAATGCGGCATTGAGCTGATTTTTAATTGCTTCATAACGAATTGAC GATGTATCATTTAGAAAATTAATAAGGTTCACTGTTACTCCGTTTTTTAA AAAACTCTAAAGATATATAGTTGAGTGCTAGTGTGGAATCTTCTACattc taaaaaatgagaaactgGGTGTCTTGAAATAAGTGCCATATTTCGGATGT CGGACTGGCGTCTAAACATTTAAACCGGTCGACATATCgtaaattttgtt tgtaatgTATGATAAAGAAGAAACTTTCTGTTTGGCTAGAGTGGCTGACT GGCAAACCTACCGACTATAAACTCATTTCGtcaaaaaaaaccgtttgcaa tttttttcggcTTTGGTTTTTTTTCTTAGATAATATTTCATCTTAGACTA TATCATAGTTTAGGTCAAAATATGAATCTCGAAAGATTAGCTTTCTCATT CTCTAacgaaaaagttgtttttatgtAGAAAATATTTAGATCTTCATGTC AGActacttaaaattttgatttcgctTTAGCgttcacttttaactttccC GTTTCTAATGACGATATTTGCTATAAAAAGCTCCTTTAACGATCTTCCTG AGTGTCAAGGCCTTCAGTTGTATAGTGAAAAGATGAACTCGTTTAAAACA CGCGTTTCCTTCCACTGTTAAATATTCTGATTTCACTTTTATGAGCTTCG ATACTGATTATGTATAACCTTACCTCATTTAATTCattatattcatgacg taatgttttctacggaaagaccccggtttttgccagtagtggcaaatttt atacaacttttgtctagtttaaatttgccactactggctacaaCCGGGGT ATTTTTCCTATTAGAAAACATTATggcatgaatatcatgaatgacATCAA TATCTTTATACAATTATCATATTCTTTATTGCTGGGGATTTCGATCCTTT TGTTTTGAAGTCAGAACATTCAGTGGGGattgggaaaaatagcataatat tttcagtagggacaagaattggaggataattttccaccgggaaaATTCCA ACTTTTCCAGTGAGAAGGTGTCCCAGTGGATCTGTGAGAGAAGGGTGTTG TAAAGGTTGCAAGTGTCAAGGTAACCTTGTTACTAGTGTATTAACCGTTT TTCGAAACTTGCTGATGGCGTCAATTAGTATTCTTCGGCTTGTATCAATA AAGTGAATAATACCTGTGATACACGGAGACGAGTTTGGTGTTAAGGCAGT ATATGAATTATGCGAGATACATTTTGCCACTGGTTGATGTTCTAAGAACT TCACTGTCTTTACATTTTTCATTCTGATCCAAGAGAATTTGCTAGATTAG CCCTTTGCaatttaaacacccctgtctctgtgccccAGTGGGTGTTGAGT ACCCAATGGGGTGAGAAtgaaaaaaacctgaaaatcaCTGGGGTGAAAAA TcttctttcaaatattgagCGGGGTGGCgaaaatttccttgaaattcact ggggtgagaaagaattttttgcatgagCTAAATTTTGGTTAGCCTGTTAG ACAAAAAACCGCTTAATTCTATCGTGTTTTAACTATGGAAGGTACTGGCT AACTTTTGGTTTAGTGCTAGTCAAAATCTGCTTCTTACATGCTACTAAAG TAGAAATATCATCTTGATCAGGTGAATATACTCTTACAGTACTGTAACAG GAAATGTAATGAGGTCTGGGGGAAGGGGGCTATAGAGGAGCAGTATGGTT ATATCAAATTTTACTCTGGGACCTAGTAATGTTTAGTCAACATGGTTAAA GTAGAGGTCTTTCTTTCAGTATCTATGCAAGTGAGAAAGCCTCTCGAAAA CCTTTGAGGCTACAACCTAGCTTTAAAGGAAGAAAGGGCCAAGTACAACC GTGGTTTGCGCtgacagagaaatttttgattttcaaccccTCTTGTTTGG CactttccacgttttaaaatgacCATAGAAGTCGGGTTAAATACAGTAAA TAGTGGAACATTTGATGGcgattttttttggctttttcagaTATTTCACC TTTAAAGAAGGGGAAGGAGAAAATACTACTGGGgcgattttttgaaagaa acgtTCTACTGGGGTACGTTAAAATAAGGGCTTTTCGAGTGGGGtgtaaa ctttttatcattttcaatggggtgtttttttactacaacattccagtggg gtgagtgatttGTCCGGTGGGGCTGAAAAATGagccatttttggaaaaaa atttcactggggtggccagtggggtggatcccactgggtcacagaggcAG GGGTGTATTTAACATAGACGTCTAAACTAAGTCACTGTAATCGGTGTAGT TTTAGGAAGGTGGAAATACCGCCCGTTTGGAAAAACCTTTGGGCTGAGGA AACAATGGTGTTAACGTTTGTTTCAAACTGTACTCCCGCTTTTTCCCCGT AAACCACGTAAACGCCGTGCATATGtgttttcccgcgtttactatcCCTC TTGACCCCCGTCACCGGGAGGGGGCATGGCCCcctaatattttgcaaagt aatttttttactttaaaaaatctcataataccgtttagagggatgaaata agggtgaaaagacgaaaattttctttgtcgccttaccatggtgggcgaca tatttttttggccccctcaattcgattcgcacgccgggggccatgtccct ctaacggacgatagcatcgtctaaatttaatgatatcctGAACGTCAAGG CTGCATGTAAGCCATAGGAAAATCATTTATGTTTTTGCTTCCCCACGCAA CTAAGCAAATCGTAAATCGTAAATCAAAAATTACGTACAAGAAAACGAAA CCACAAAATATAATGAgctgttttaaaaaaaacttatattGCACTGTGAT TACTCGTTTTCAAGTTATGGAGTAAAGCGTGCCTTAAGATTTCCGGTATC GGAATTCTTTAATGAAGGAAATCTTTCAAtcctttaaaaagaaaagaaaa tcaagtcagcaaaattttaaaagtaatGAGTaaagtttttcataattatt gaGGTATTACtcattttcaagaaatatttatGTGCCTAAGTACTTCTGAT ATCGGAATACTACATAGTAATATATAGGAAACATTTTCAACGCAGAAAGG ACTAGTGAGTCAGCAAATTTAGAAATAGCATAGACATAGACATAGAATGT TGAGATCATTCATTACGTCTTTACGTTTCCGATGTCGGAATTCTGTAGAA GGAAACTGTTAATAAGTGAATCATAGTCTGTTTTGTAAAATTCAATGCTG AATCATTTGACTTCACTGTCGCCTTCATAAAAATCAGGGGGTGAGAATTT GATGGGTTATTGTCCTCACGTGTATATACATTATCTTCCTTATTTCCAAA GAAgtaacaagaatcgcaaaattgcgactaaatatttccttaaaaatgaa ggtcattattgacatatataaaaaagcacacataataaagtatacatata tatttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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ATTCCAAGAGTTCCAtacaaaaaaatgtcatttaactGTAAATCCCATGT TGTAATTTGATCNATTCAGTCTTCTCTATCTTTTCCTCTCAATCTTGCCT TGTTTTGGTTTGGAATTTTCGCAAGATGGCGCATATCATCGAAAAAGTCC CTACAGCTAGTTACCAGGCCCTTTTACGGAATGTGGCTAATGTTGTCTAA AAAGAAAGGGACACTTTANttcccttttggaaaacgggaaatatttaata aaagcGAATTATAAAATCGTGAAAAAGTATGTAAGACTAAGATTAAAAGA TTAAgagttaaaaataatttttaataccCAGAACTGAAGATGGTTCAACT GAAATGCTCTTGCTTCAATaagataaaaatttgttgttttttgaacCGGA CGTAAAATACGTAAAATTTGGCCAGTAACTCCAAAAAATAAACTTAATAG GCACTTTAggccgattttcgaacttttaacTACCCCTGTCAAACTTGGTT CATtggaaagctctatcttttctCGTTTCAACGAGGGGTCACTGACCTCT NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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ATTTCAATATTGAATGTccattttgattcattttggTGCTAAAAATGATG TCTCGTGATgctgaataaaaaaatttacaaattttcaaaaatttggcctc aaaattaagaaatttcaattttaggccatctgatgacgtcataaacccgt tttttgtaataactcttgatacactttgattgcaaagctaaaattttgca cactgaaaggTATTGTGGTAaactagattttgaaaaaaaaaaatttgaaa aaattgatgacgtcagcattttattgcaaaaattcgatttttgcttattc ctgctgacgtcagcagaaaaaatcgaaatttttgatttgtaaATTTTCTG TACCTGAATATCTTTCAGTGTGGCAAATTTCATTGCCTAAAGTGGTTTCA GTCAACAAGTATTGAAGATTTTAGATTCGATGACGTCATNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAACtatcataaaaaatgtt tttttgcaatTCTCATCAAATAAAGGGTCTTCAAAATTTGgtttagatat ctcctttcatcAAAAGATTTCCACATTCCATCTACTATCTAAAAAATCAA ACGAAACACAATATTTTACTGAAAGTGACACAGTCAATTTTATTCTTGTA ATGAATAACAATTTATTAGACATGTTCACAGATGATAAAAACttgttaag aaattgcatgcaaatgataaTCATGAGTAAGAAAGTGCTAAAATATCTTG AGATTGTCTACTAAGGGACCCATGGAAATATGGCAATGAATTTGGGAGAT ATCGCAATGCTGTACACCttagtttcatatgaaaaatttccttgtcatca atattttatacCACCATAATATACcattcacaaataaaaagttacNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC GAAATTGTCACATTTAGTTATTCCTaaatatttacaacactttccagcaa tcttttttgtgaaatttgtgtcttCATAAACGAAACTCCATGACATTTGT ATTATTGATATTAAATCACAGTTTGGAACACTAGAGTTGCTTGGTCCAAT TATTGCAAGAATGTttatctttgtttgcattttcattatgtgcaacatta tcattacatcattgtcAGCAAGTTACGttgtattgtcagctttagaggtt gttcaactttgttgaatttgtaatcctggcacctgaatgtgaaaggaaaa aaaatcaaaatttcataatgggaaataatctcttttaaaggaatcaatgc caaatgtgtggtcattcGCTAAAATCTGCTGAGAAAATAGACTCTAAGGT gtgagactctgcttgatggttAGGGCTATGTTTTCCATGCATATATACTG AGCCATTGAAGAAGTTTACAGGAGagtacaaaaaggaccacagggAACAT ACAGAAAGAGTCACGAGAGCCTACAAGAAGGACCATGGGGAACGTACAAA GGTACACGgagaacgtacaataaggtacactgggaacgtacaataagggg acaagctggagtttttacaagctcttatttgatttggttggtcgttaacc tgtaatttaacaattttgttactttttctaaagaacgtgtcatctctttt acttttaatgaccaattagtgaagtatcttataaaaactccagaaaatcc tacaataaggtacacggggaacttgcaataaggtacacggggaacgtaca taAGGTACAAAGTGAACGTACACAAGGTACAAAgtgaacgtacaataagg tacacggggaacgtacaataaggtacacggggaacgtacaataaggtaca cggggaacgtacaataaggtacacggggaacgtacaataaggggacaagc tggagttttaacaagctcttatttgatttggttggtcgttaacctgaaat aaaacaattttattactttttctaaagaacgcgtcatctcttttactttt aatgacccaattagtgaagtatcttataaaaactccagaaaatcccacaa taaggtacacggggaacgtacaataaggtacacggggaacgtacaataag gtgcACGGGGAactacaataaggtacacggggaacgtacaataaggtaca cggggaacgtacaataaggtacatggggaAATTGCAATAAGGTATGTACA CAGGGAAattgcaataaggtacacggggaacgtacagtAAGGTTCACGGG GGGAATGcacaataaggtacatggggaAATTGtaataaggtacacaggga aattgcaataaggtacacagggaaattgcaataaggtacacggggaacgt acagtAAGGtccacggggaacgtacaataaggtacatggggaAATTGtaa taaggtacacagggaaaTTACAATAAAGTACacgggaacatacaataagg tacacgaggtACGtgtacgtacaataaggtacacggggaaattgcaataa ggtacacagggaacgtacaataaggtacacgaggaacgtacaatGAGGTA CACGGGAAattgcaataaggtacacgaggaacgtacaataaggtacacgg gaaattgcaataaggtacacaggAATGTACAAAACGGTACACAGGGAGCA TATATACAAAAGTTACATGGGGAACATACAAAAAGGTACACAGGTGACAG GGATATTTTAACATCTTTAGCATCATCAGACATCAAGACAAGGCTAAATA TATGGGCCACAAATAAAAgtgcaagcttttccaagttttgatCATTACTA TCTAGACAATATACatgaaatcagaaagaaatttatgctTACCTTCTTCT CTTCTATTCATTAAAATAGGAATAGATATTTCCATGtttttcagcttctt tctccacCCCTCTTCTTCTCCTTTCTTGATCCGGAATCTCAAAAAACCCG TGCAAAATCGAAAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNcccctgccatattttgatagaagaat gtttactattttttgaaaaatccgaAACCCCGTCTTTATAAAGAAACGAT TCCCCGCTAAATTTTCGCGACAacttttagtcacgtgactgaagtgccTA AACTTAACTAAAAAAAACTcgaaaaaactgaatttttttagaTGTAAATA GAAATTTGTGCAATCTGACAGAACActagtattttttataagcttgAGAA TACCACCGAAATATATCGCTTgactatttttaaattttatactttcctaa tttccaaatgttttttatttcagtacACTTACCTTAAAGACGCGAAGTCT GGTAACAAGTCATGCACTGTCCGAAACACACGTGGTCAAGTCGATTTCTT TCACGATTTACGAAAACTCTCATACAGACAACAATTCAAAACTGACGAAT ACTTCTTCACAGATGGTCCCGCCCGAAATCATGCCGCCTCCACCATAAAG AAATGGGCGTTCCGCCAATTCCACCCTTCCCAACCAAAATGTCCGTCATC ATTCTATAAGGTGAAACATGGTAGCAACAACCATAAAGGAACCAAAGAAG AATTTATCAAGTTTCATTATTTCTACCTGACAAGACCAAGACCAGATTAT TTCAGACTACCAGCTGAATGTTTGAAATTAATCCAATACCATGATGACCA GAAAAAACGCCAGTTAAATAACCTTGATGATGATAATGAAAAACGTGAAG AATTTAATGGAGAAAGAGCTGCTGAAATTGAACGTGAACTTGAAATGGAC TTTCATAAACTGTTTTAAAAAATCGTGTATTTGCAAAGTTAGCCTATAAC GTTGTTTTTAACATTCATTGAACACGGACGTTAcgaacgttaaatgaacg ttaaaAGAACGTTGTAGGGTGACTTCGGTAAAAAATTTTGT

Coding sequence (CDS) from alignment at sc0000076:664056..680596+

>TCONS_00007386 ID=TCONS_00007386|Name=TCONS_00007386|organism=Clytia hemisphaerica|type=CDS|length=1122bp|location=Sequence derived from alignment at sc0000076:664056..680596+ (Clytia hemisphaerica)
ATGAAAGATGTTATTCGGATTACACAAGAAGAACACAGACTTCACTTTGG
AAATGCAATTATTCAGtacACTTACCTTAAAGACGCGAAGTCTGGTAACA
AGTCATGCACTGTCCGAAACACACGTGGTCAAGTCGATTTCTTTCACGAT
TTACGAAAACTCTCATACAGACAACAATTCAAAACTGACGAATACTTCTT
CACAGATGGTCCCGCCCGAAATCATGCCGCCTCCACCATAAAGAAATGGG
CGTTCCGCCAATTCCACCCTTCCCAACCAAAATGTCCGTCATCATTCTAT
AAGGTGAAACATGGTAGCAACAACCATAAAGGAACCAAAGAAGAATTTAT
CAAGTTTCATTATTTCTACCTGACAAGACCAAGACCAGATTATTTCAGAC
TACCAGCTGAATGTTTGAAATTAATCCAATACCATGATGACCAGAAAAAA
CGCCAGTTAAATAACCTTGATGATGATAATGAAAAACGTGAAGAATTTAA
TGGAGAAAGAGCTGCTGAAATTGAACGTGAACTTGAAATGGACTTTCATA
AACTGTTTTAAATGAAAGATGTTATTCGGATTACACAAGAAGAACACAGA
CTTCACTTTGGAAATGCAATTATTCAGtacACTTACCTTAAAGACGCGAA
GTCTGGTAACAAGTCATGCACTGTCCGAAACACACGTGGTCAAGTCGATT
TCTTTCACGATTTACGAAAACTCTCATACAGACAACAATTCAAAACTGAC
GAATACTTCTTCACAGATGGTCCCGCCCGAAATCATGCCGCCTCCACCAT
AAAGAAATGGGCGTTCCGCCAATTCCACCCTTCCCAACCAAAATGTCCGT
CATCATTCTATAAGGTGAAACATGGTAGCAACAACCATAAAGGAACCAAA
GAAGAATTTATCAAGTTTCATTATTTCTACCTGACAAGACCAAGACCAGA
TTATTTCAGACTACCAGCTGAATGTTTGAAATTAATCCAATACCATGATG
ACCAGAAAAAACGCCAGTTAAATAACCTTGATGATGATAATGAAAAACGT
GAAGAATTTAATGGAGAAAGAGCTGCTGAAATTGAACGTGAACTTGAAAT
GGACTTTCATAAACTGTTTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004154XLOC_004154Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007386-proteinTCONS_00007386-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007386-exon-sc0000076-1491911889:664056..664657TCONS_00007386-exon-sc0000076-1491911889:664056..664657Clytia hemisphaericaexon
TCONS_00007386-exon-sc0000076-1510915933:664056..664657TCONS_00007386-exon-sc0000076-1510915933:664056..664657Clytia hemisphaericaexon
TCONS_00007386-exon-sc0000076-1575043694:664056..664657TCONS_00007386-exon-sc0000076-1575043694:664056..664657Clytia hemisphaericaexon
TCONS_00007386-exon-sc0000076-1491911889:679979..680596TCONS_00007386-exon-sc0000076-1491911889:679979..680596Clytia hemisphaericaexon
TCONS_00007386-exon-sc0000076-1510915933:679979..680596TCONS_00007386-exon-sc0000076-1510915933:679979..680596Clytia hemisphaericaexon
TCONS_00007386-exon-sc0000076-1575043694:679979..680596TCONS_00007386-exon-sc0000076-1575043694:679979..680596Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000076supercontigsc0000076:664056..680596 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.912385 0.451912 2.97338 2.41008 10.6242 5.98104 0.812087 0.557786 0.130173 1.28992 1.4607 0 2.67115 0.853542 20.0285 6.97116 0.0386546 0.396197 0 0 0.0339287 0 0.120706 0.107351 0 0 0.240589 0 0.0778982 0.357147
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007386 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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