TCONS_00007316 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007316
Unique NameTCONS_00007316
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1217

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007316 ID=TCONS_00007316|Name=TCONS_00007316|organism=Clytia hemisphaerica|type=transcript|length=1217bp
CGGAGCTAATATTGGCTACCTCTTAACATTGACTcgaatttccaaatttt
aatttaatcaGGTCGAGCTGAACAAATATGGTTTTAATTTAATCAAATCT
TCGAGGAGGTGAAAAGTTGGTATATAATTAGAGTTGAATAGTGAAAAGTC
ATTCAGTATTCAGACCTTGAAAGCGAGAAAActgaagcaaaaaaaatgaa
tgCAAGAATTTTAATTGTATTGTCCTTGGTTGCCTTGGCAGCAGGATGTG
GAAAACAATACTTTCCAGCCAGTCGAGTTATCGGTGGCACAAACGCTAAA
CCAAACTCGTGGCCATGGCAAATCGTCTTGTTATCTAACGGTAGACCAGG
CTGTGGCGGATCCATCATCAGCCCCAACTGGATTGTTACTGCTGGACATT
GCGTTGTTGACAGAAGTGACCGCAAAAAACCTGCTTCGTCTCTCTCTGTA
AAAGTTGGCAAACATGATTTACGAAGACGTGAACGATACGAAAGAGAATA
TCGCGCATCTCAAGTTATTGTTCATCCAGGCTTCTCTATGCGACACATGA
AAAACGACGTGGCTCTCATTCGCCTTTCATCTCCAATTCAATTCAACCAA
GCCGTTCAACCTATCTGTTTACCAAAATCCGCAGCCAGAGTTGGACAAAC
ATGTTATATCACTGGTTGGGGACGTGCGTCAAGATCAGCAAGACAAATGC
ACCACACTTTACAACAAGCTTCAATGCCCGTCGTCGATCAAAGAACATGC
GCATATCACATGCAGAGAGTCGCCCCATTGCCAATCGGTCCACACAGCAT
CTGTTCCGGATATGGTCGTACCCGTATTAGCGGTTGTCAAGGAGATAGCG
GTGGCCCATTCGTTTGCAACAACGGCCGGAACTGGGAACTCCATGGTGCA
GTCAGTTGGGGATCAAGAGATTGCAGTGCACGTCCTAACCAATACAGTGT
CTACGCTAACATCTATTACCTCAAGAGCTGGATTTCAAGAACCACTGGTG
TTTACTAAGTTCGCTTCTTAGCTCACAGATAACATATTGCTTTAATATTC
ATGTAACCTTATTGCGATATCACTAGATGAATGttatgttttgatgttct
tatttgttaaacctttgaaaatataaaaacgtTTTTGAAGAATAGTACAT
AATTTCAGTTGTTAACTAAATTGTTCACTCAATAGGTACATCCTCTGTGT
GGGACCACCAAACTGTA
Run BLAST on NCBI

protein sequence of TCONS_00007316-protein

>TCONS_00007316-protein ID=TCONS_00007316-protein|Name=TCONS_00007316-protein|organism=Clytia hemisphaerica|type=polypeptide|length=270bp
MNARILIVLSLVALAAGCGKQYFPASRVIGGTNAKPNSWPWQIVLLSNGR
PGCGGSIISPNWIVTAGHCVVDRSDRKKPASSLSVKVGKHDLRRRERYER
EYRASQVIVHPGFSMRHMKNDVALIRLSSPIQFNQAVQPICLPKSAARVG
QTCYITGWGRASRSARQMHHTLQQASMPVVDQRTCAYHMQRVAPLPIGPH
SICSGYGRTRISGCQGDSGGPFVCNNGRNWELHGAVSWGSRDCSARPNQY
SVYANIYYLKSWISRTTGVY
Run BLAST on NCBI

transcript from alignment at sc0000075:409875..412982-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007316 ID=TCONS_00007316|Name=TCONS_00007316|organism=Clytia hemisphaerica|type=transcript|length=3108bp|location=Sequence derived from alignment at sc0000075:409875..412982- (Clytia hemisphaerica)
CGGAGCTAATATTGGCTACCTCTTAACATTGACTCGAATTTCCAAATTTT
AATTTAATCAGGTCGAGCTGAACAAATATGGTTTTAATTTAATCAAATCT
TCGAGGAGGTGAAAAGTTGGTATATAATTAGAGTTGAATAGTGAAAAGTC
ATTCAGTATTCAGACCTTGAAAGCGAGAAAACTGAAGCAAAAAAAATGAA
TGCAAGAATTTTAATTGTATTGTCCTTGGTTGCCTTGGCAGCAGGTAATG
TTTTCCACTCTCAAAGCTGACATACAACGTTGTTTCAAGGTTCATTTTTA
GTGTTATATGGACGTTGAAACCGTTGGACATACACCCAGCAATTCAAGTT
GAAAAGGAACCTCTCAAGTGACCCAGAGGTTTTTTAGGATTTTTTTTATT
AACAGGTTAGAGGGTAAACCACTAAAAAACTCGTATACCCTTTTGAACAA
ATCATTGAATCTAGTTTCCAGTCCCACTAGGTCTGCGAGAACCAATAAAA
AAGGGAACTCCCAATTTTTGCCCCTCCTATTTCCACAAATTCGGCTTTTT
TTTTAATTTTCACCAAAAGATTTTCGTCGATTTTCAAAAAGTTTTACTAG
TTGCTCCTGGTCATTGGCAGCTCCCCAGGTTCTACAATCTTAAATACAGC
TGAGAAACAGACATTTATTAAAATATTGAAAATCACACTTCAAATTTGTA
CATTCATTGTCATTTTGTCAACTATAGGATGTGGAAAACAATACTTTCCA
GCCAGTCGAGTTATCGGTGGCACAAACGCTAAACCAAACTCGTGGCCATG
GCAAATCGTCTTGTTATCTAACGGTAGACCAGGCTGTGGCGGATCCATCA
TCAGCCCCAACTGGATTGTTACTGCTGGACATTGCGTTGTTGACAGAAGT
GACCGCAAAAAACCTGCTTCGTCTCTCTCTGTAAAGTAAGTCGATTCATT
AAGTAAACCATTGGAAAAGTTCTAAATCTTTAAAGTTTTACCAAGCTAGA
CAAGAATGGTGATAGACTCTTTATTTTCACTGAAATCAAGTCTTCCAAAA
ACGTCTTAAAAAACCGTGAGAGATTTATCAATATTTTGCATATTGCTTAA
AAGACGACTCTTGCAGCACATGACTAACTAAAGAGCCAAGAGGGAAAGGG
TAAAATATCTCGATTATGGTAGATTAAAATTTGTTGCGCGAACTTCTGAA
ACCTCATTCGAAGCATTTCATTTTCTCCAGCCGATCCCCTTTCAATACAA
TGACGCGACTACGTGGCTTTTCTGATGCAAGATGACATAGGAACACGTTT
TTAGCGTTTTTTGAAAATGAACCCTGGATTTCAAGAGCCACTGGTATTCG
TTTAATAGGCCCACTTCGTTATGGGCTGACAAAGAATATTTGTGTATGTT
AAATGGAGCTTTAAAATGTTCTCAATCTTTTCATCTCAGAGTTGGCAAAC
ATGATTTACGAAGACGTGAACGATACGAAAGAGAATATCGCGCATCTCAA
GTTATTGTTCATCCAGGCTTCTCTATGCGACACATGAAAAACGACGTGGC
TCTCATTCGCCTTTCATCTCCAATTCAATTCAACCAAGCCGTTCAACCTA
TCTGTTTACCAAAATCCGCAGCCAGAGTTGGACAAACATGTTATATCACT
GGTAAGTGAAGAGAAAGTTTTGTAAACAGTATTAAGTGTGTTTCACAATG
AGGTGGAAAAGGTGTAGTAGTGTAGTGGTTAACGTCCTTGGCTGTCCGTG
TAGGAGGCCAGGGTTTTATTCCTATTCAGAACTGTGACACACTTGGCGAG
TGAAACCTTCGCACGGCAACTCCTTGTCATGTGAGGGGAATTCGATATCA
TTACTCTTCTACAAGAGTGGAGAAGTATTTCAGATACTGTATCTGTGTGT
TGGGGACGTTACTCACGTGTTCAAGCACTTACGAGGTTAAACTGCGTGTC
TGGCTAACATTGCAAATATACGCCAAGGTTCTTTTGTGTCCTGTACACGA
TTTCAACAGTATTTGTTCAGGGAAAAAAATTCCTAGAATAAGCAACTACC
CCTTTATATAATCCATGTCGTCAGCATTAATGGAAATCAGCCTCCCTTCC
GTCTAAAAAGGAAAAGTTCAAAGAGAGTGCAAACTTTGCAAGATTTTAGC
TGTTCTACTGTCTCGATTTAGTTGTTTTTGACAACCAGATGCTGCTAGTC
TGTATGCAAGAAAGCAGAATGATTTTAATCTTTTGAAAGGCCTACTTATC
CTGGATAAGCTAAAAGATATTTTGACCTACACAACATCCTCAGGTTGGGG
ACGTGCGTCAAGATCAGCAAGACAAATGCACCACACTTTACAACAAGCTT
CAATGCCCGTCGTCGATCAAAGAACATGCGCATATCACATGCAGGTATGT
CTATAAGAGAGAGAGTGTCATTTCTTTACTCGGACAGTTATGTGCTCTCT
CTTTAAAAAACGTCATTTTACGTTTTTTTCGAACATTTGCTCATAACGTT
TTTTAACAACAGCTCCATAACCACTTGAGTGAAAAATTTGAATTCTTTCG
TTAATTCTGCATTATCAGCAGAAGTTGTGCACGTGATTTGTAAAGACTGA
AAATGTTCTTCTAGCTTTAACCCTAAATTGTTATGTATTCGTTTTGCCTT
TCGCAGAGAGTCGCCCCATTGCCAATCGGTCCACACAGCATCTGTTCCGG
ATATGGTCGTACCCGTATTAGCGGTTGTCAAGGAGATAGCGGTGGCCCAT
TCGTTTGCAACAACGGCCGGAACTGGGAACTCCATGGTGCAGTCAGTTGG
GGATCAAGAGATTGCAGTGCACGTCCTAACCAATACAGTGTCTACGCTAA
CATCTATTACCTCAAGAGCTGGATTTCAAGAACCACTGGTGTTTACTAAG
TTCGCTTCTTAGCTCACAGATAACATATTGCTTTAATATTCATGTAACCT
TATTGCGATATCACTAGATGAATGTTATGTTTTGATGTTCTTATTTGTTA
AACCTTTGAAAATATAAAAACGTTTTTGAAGAATAGTACATAATTTCAGT
TGTTAACTAAATTGTTCACTCAATAGGTACATCCTCTGTGTGGGACCACC
AAACTGTA

Coding sequence (CDS) from alignment at sc0000075:409875..412982-

>TCONS_00007316 ID=TCONS_00007316|Name=TCONS_00007316|organism=Clytia hemisphaerica|type=CDS|length=4065bp|location=Sequence derived from alignment at sc0000075:409875..412982- (Clytia hemisphaerica)
AGAGTCGCCCCATTGCCAATCGGTCCACACAGCATCTGTTCCGGATATGG
TCGTACCCGTATTAGCGGTTGTCAAGGAGATAGCGGTGGCCCATTCGTTT
GCAACAACGGCCGGAACTGGGAACTCCATGGTGCAGTCAGTTGGGGATCA
AGAGATTGCAGTGCACGTCCTAACCAATACAGTGTCTACGCTAACATCTA
TTACCTCAAGAGCTGGATTTCAAGAACCACTGGTGTTTACTAAGTTGGGG
ACGTGCGTCAAGATCAGCAAGACAAATGCACCACACTTTACAACAAGCTT
CAATGCCCGTCGTCGATCAAAGAACATGCGCATATCACATGCAGAGTTGG
CAAACATGATTTACGAAGACGTGAACGATACGAAAGAGAATATCGCGCAT
CTCAAGTTATTGTTCATCCAGGCTTCTCTATGCGACACATGAAAAACGAC
GTGGCTCTCATTCGCCTTTCATCTCCAATTCAATTCAACCAAGCCGTTCA
ACCTATCTGTTTACCAAAATCCGCAGCCAGAGTTGGACAAACATGTTATA
TCACTGGATGTGGAAAACAATACTTTCCAGCCAGTCGAGTTATCGGTGGC
ACAAACGCTAAACCAAACTCGTGGCCATGGCAAATCGTCTTGTTATCTAA
CGGTAGACCAGGCTGTGGCGGATCCATCATCAGCCCCAACTGGATTGTTA
CTGCTGGACATTGCGTTGTTGACAGAAGTGACCGCAAAAAACCTGCTTCG
TCTCTCTCTGTAAAATGAATGCAAGAATTTTAATTGTATTGTCCTTGGTT
GCCTTGGCAGCAGAGAGTCGCCCCATTGCCAATCGGTCCACACAGCATCT
GTTCCGGATATGGTCGTACCCGTATTAGCGGTTGTCAAGGAGATAGCGGT
GGCCCATTCGTTTGCAACAACGGCCGGAACTGGGAACTCCATGGTGCAGT
CAGTTGGGGATCAAGAGATTGCAGTGCACGTCCTAACCAATACAGTGTCT
ACGCTAACATCTATTACCTCAAGAGCTGGATTTCAAGAACCACTGGTGTT
TACTAAGTTGGGGACGTGCGTCAAGATCAGCAAGACAAATGCACCACACT
TTACAACAAGCTTCAATGCCCGTCGTCGATCAAAGAACATGCGCATATCA
CATGCAGAGTTGGCAAACATGATTTACGAAGACGTGAACGATACGAAAGA
GAATATCGCGCATCTCAAGTTATTGTTCATCCAGGCTTCTCTATGCGACA
CATGAAAAACGACGTGGCTCTCATTCGCCTTTCATCTCCAATTCAATTCA
ACCAAGCCGTTCAACCTATCTGTTTACCAAAATCCGCAGCCAGAGTTGGA
CAAACATGTTATATCACTGGATGTGGAAAACAATACTTTCCAGCCAGTCG
AGTTATCGGTGGCACAAACGCTAAACCAAACTCGTGGCCATGGCAAATCG
TCTTGTTATCTAACGGTAGACCAGGCTGTGGCGGATCCATCATCAGCCCC
AACTGGATTGTTACTGCTGGACATTGCGTTGTTGACAGAAGTGACCGCAA
AAAACCTGCTTCGTCTCTCTCTGTAAAATGAATGCAAGAATTTTAATTGT
ATTGTCCTTGGTTGCCTTGGCAGCAGAGAGTCGCCCCATTGCCAATCGGT
CCACACAGCATCTGTTCCGGATATGGTCGTACCCGTATTAGCGGTTGTCA
AGGAGATAGCGGTGGCCCATTCGTTTGCAACAACGGCCGGAACTGGGAAC
TCCATGGTGCAGTCAGTTGGGGATCAAGAGATTGCAGTGCACGTCCTAAC
CAATACAGTGTCTACGCTAACATCTATTACCTCAAGAGCTGGATTTCAAG
AACCACTGGTGTTTACTAAGTTGGGGACGTGCGTCAAGATCAGCAAGACA
AATGCACCACACTTTACAACAAGCTTCAATGCCCGTCGTCGATCAAAGAA
CATGCGCATATCACATGCAGAGTTGGCAAACATGATTTACGAAGACGTGA
ACGATACGAAAGAGAATATCGCGCATCTCAAGTTATTGTTCATCCAGGCT
TCTCTATGCGACACATGAAAAACGACGTGGCTCTCATTCGCCTTTCATCT
CCAATTCAATTCAACCAAGCCGTTCAACCTATCTGTTTACCAAAATCCGC
AGCCAGAGTTGGACAAACATGTTATATCACTGGATGTGGAAAACAATACT
TTCCAGCCAGTCGAGTTATCGGTGGCACAAACGCTAAACCAAACTCGTGG
CCATGGCAAATCGTCTTGTTATCTAACGGTAGACCAGGCTGTGGCGGATC
CATCATCAGCCCCAACTGGATTGTTACTGCTGGACATTGCGTTGTTGACA
GAAGTGACCGCAAAAAACCTGCTTCGTCTCTCTCTGTAAAATGAATGCAA
GAATTTTAATTGTATTGTCCTTGGTTGCCTTGGCAGCAGAGAGTCGCCCC
ATTGCCAATCGGTCCACACAGCATCTGTTCCGGATATGGTCGTACCCGTA
TTAGCGGTTGTCAAGGAGATAGCGGTGGCCCATTCGTTTGCAACAACGGC
CGGAACTGGGAACTCCATGGTGCAGTCAGTTGGGGATCAAGAGATTGCAG
TGCACGTCCTAACCAATACAGTGTCTACGCTAACATCTATTACCTCAAGA
GCTGGATTTCAAGAACCACTGGTGTTTACTAAGTTGGGGACGTGCGTCAA
GATCAGCAAGACAAATGCACCACACTTTACAACAAGCTTCAATGCCCGTC
GTCGATCAAAGAACATGCGCATATCACATGCAGAGTTGGCAAACATGATT
TACGAAGACGTGAACGATACGAAAGAGAATATCGCGCATCTCAAGTTATT
GTTCATCCAGGCTTCTCTATGCGACACATGAAAAACGACGTGGCTCTCAT
TCGCCTTTCATCTCCAATTCAATTCAACCAAGCCGTTCAACCTATCTGTT
TACCAAAATCCGCAGCCAGAGTTGGACAAACATGTTATATCACTGGATGT
GGAAAACAATACTTTCCAGCCAGTCGAGTTATCGGTGGCACAAACGCTAA
ACCAAACTCGTGGCCATGGCAAATCGTCTTGTTATCTAACGGTAGACCAG
GCTGTGGCGGATCCATCATCAGCCCCAACTGGATTGTTACTGCTGGACAT
TGCGTTGTTGACAGAAGTGACCGCAAAAAACCTGCTTCGTCTCTCTCTGT
AAAATGAATGCAAGAATTTTAATTGTATTGTCCTTGGTTGCCTTGGCAGC
AGAGAGTCGCCCCATTGCCAATCGGTCCACACAGCATCTGTTCCGGATAT
GGTCGTACCCGTATTAGCGGTTGTCAAGGAGATAGCGGTGGCCCATTCGT
TTGCAACAACGGCCGGAACTGGGAACTCCATGGTGCAGTCAGTTGGGGAT
CAAGAGATTGCAGTGCACGTCCTAACCAATACAGTGTCTACGCTAACATC
TATTACCTCAAGAGCTGGATTTCAAGAACCACTGGTGTTTACTAAGTTGG
GGACGTGCGTCAAGATCAGCAAGACAAATGCACCACACTTTACAACAAGC
TTCAATGCCCGTCGTCGATCAAAGAACATGCGCATATCACATGCAGAGTT
GGCAAACATGATTTACGAAGACGTGAACGATACGAAAGAGAATATCGCGC
ATCTCAAGTTATTGTTCATCCAGGCTTCTCTATGCGACACATGAAAAACG
ACGTGGCTCTCATTCGCCTTTCATCTCCAATTCAATTCAACCAAGCCGTT
CAACCTATCTGTTTACCAAAATCCGCAGCCAGAGTTGGACAAACATGTTA
TATCACTGGATGTGGAAAACAATACTTTCCAGCCAGTCGAGTTATCGGTG
GCACAAACGCTAAACCAAACTCGTGGCCATGGCAAATCGTCTTGTTATCT
AACGGTAGACCAGGCTGTGGCGGATCCATCATCAGCCCCAACTGGATTGT
TACTGCTGGACATTGCGTTGTTGACAGAAGTGACCGCAAAAAACCTGCTT
CGTCTCTCTCTGTAAAATGAATGCAAGAATTTTAATTGTATTGTCCTTGG
TTGCCTTGGCAGCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004103XLOC_004103Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007316-exon-sc0000075-1575043694:412739..412982TCONS_00007316-exon-sc0000075-1575043694:412739..412982Clytia hemisphaericaexon
TCONS_00007316-exon-sc0000075-1575043694:412048..412255TCONS_00007316-exon-sc0000075-1575043694:412048..412255Clytia hemisphaericaexon
TCONS_00007316-exon-sc0000075-1575043694:411332..411543TCONS_00007316-exon-sc0000075-1575043694:411332..411543Clytia hemisphaericaexon
TCONS_00007316-exon-sc0000075-1575043694:410589..410689TCONS_00007316-exon-sc0000075-1575043694:410589..410689Clytia hemisphaericaexon
TCONS_00007316-exon-sc0000075-1575043694:409875..410326TCONS_00007316-exon-sc0000075-1575043694:409875..410326Clytia hemisphaericaexon
TCONS_00007316-exon-sc0000075-1510915933:412739..412982TCONS_00007316-exon-sc0000075-1510915933:412739..412982Clytia hemisphaericaexon
TCONS_00007316-exon-sc0000075-1510915933:412048..412255TCONS_00007316-exon-sc0000075-1510915933:412048..412255Clytia hemisphaericaexon
TCONS_00007316-exon-sc0000075-1510915933:411332..411543TCONS_00007316-exon-sc0000075-1510915933:411332..411543Clytia hemisphaericaexon
TCONS_00007316-exon-sc0000075-1510915933:410589..410689TCONS_00007316-exon-sc0000075-1510915933:410589..410689Clytia hemisphaericaexon
TCONS_00007316-exon-sc0000075-1510915933:409875..410326TCONS_00007316-exon-sc0000075-1510915933:409875..410326Clytia hemisphaericaexon
TCONS_00007316-exon-sc0000075-1491911889:412739..412982TCONS_00007316-exon-sc0000075-1491911889:412739..412982Clytia hemisphaericaexon
TCONS_00007316-exon-sc0000075-1491911889:412048..412255TCONS_00007316-exon-sc0000075-1491911889:412048..412255Clytia hemisphaericaexon
TCONS_00007316-exon-sc0000075-1491911889:411332..411543TCONS_00007316-exon-sc0000075-1491911889:411332..411543Clytia hemisphaericaexon
TCONS_00007316-exon-sc0000075-1491911889:410589..410689TCONS_00007316-exon-sc0000075-1491911889:410589..410689Clytia hemisphaericaexon
TCONS_00007316-exon-sc0000075-1491911889:409875..410326TCONS_00007316-exon-sc0000075-1491911889:409875..410326Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007316-proteinTCONS_00007316-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000075supercontigsc0000075:409875..412982 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0351962	0.0343218	0.0398509	0.0389879	0.047464	0.0375067	0.181001	0.0847254	0.177955	0.440852	0.106975	0.0234405	310.098	369.124	46.2263	116.503	30.1999	31.4685	2229.59	2292.55	302.285	335.2	674.331	767.654	1483.68	1510.29	0	0.0515054	0.23439	0.437812
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001314Peptidase_S1A
IPR001254Trypsin_dom
IPR018114TRYPSIN_HIS
IPR033116TRYPSIN_SER
IPR009003Peptidase_S1_PA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity
Blast
[Close]
BLAST of TCONS_00007316 vs. Swiss-Prot (Human)
Match: CTRB2 (Chymotrypsinogen B2 OS=Homo sapiens GN=CTRB2 PE=2 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 3.826e-43
Identity = 90/243 (37.04%), Postives = 128/243 (52.67%), Query Frame = 1 
Query:  271 SRVIGGTNAKPNSWPWQIVLLS-NGRPGCGGSIISPNWIVTAGHCVVDRSDRKKPASSLSVKVGKHDLXXXXXXXXXXXASQVIVHPGFSMRHMKNDVALIRLSSPIQFNQAVQPICLPKSAARV--GQTCYITGWGRASRSARQMHHTLQQASMPVVDQRTCAYHMQRVAPLPIGPHSICSGYGRTRISGCQGDSGGPFVCNNGRNWELHGAVSWGSRDCSARPNQYSVYANIYYLKSWISR 990
            SR++ G +A P SWPWQ+ L    G   CGGS+IS +W+VTA HC V  SD         V  G+ D    E   +  + ++V  +P FS+  + ND+ L++L++P +F+Q V  +CLP +      G  C  TGWG+   +A +    LQQA++P++    C     R     I    IC+G   + +S C GDSGGP VC     W L G VSWGSR CS      +VYA +  L  W+ +
Sbjct:   32 SRIVNGEDAVPGSWPWQVSLQDKTGFHFCGGSLISEDWVVTAAHCGVRTSDV--------VVAGEFDQGSDEENIQVLKIAKVFKNPKFSILTVNNDITLLKLATPARFSQTVSAVCLPSADDDFPAGTLCATTGWGKTKYNANKTPDKLQQAALPLLSNAECKKSWGR----RITDVMICAG--ASGVSSCMGDSGGPLVCQKDGAWTLVGIVSWGSRTCST--TTPAVYARVAKLIPWVQK 258
The following BLAST results are available for this feature:
BLAST of TCONS_00007316 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CTRB23.826e-4337.04Chymotrypsinogen B2 OS=Homo sapiens GN=CTRB2 PE=2 ... [more]
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