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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007277 ID=TCONS_00007277|Name=TCONS_00007277|organism=Clytia hemisphaerica|type=transcript|length=1310bp
NNATTTTGGAATTAGGGTTCTTGATTTCAGAAAAGTTCTAGTTTTGAAGG
TTTAAAAATCTGTTCAGATCATAAAACATTATTAATTCCATtaagtctTT
ACCAAACAAAATAGCACACAAAActaattcatttaaaaaattacatcACA
TTACATCAAATCTTTTACTAAAGAGATCTTTTTGAATGTCCAGAGGAGTA
GTCAGACCTCCAAACATACCACCTAACCCAAACCTGTTGGCACTTGGTGA
ATTCACTCTGACCAGCTTAACATCCTCACCAACTTTCCCATAACGTTGTT
CAACAAAATTGCANATTCACTCTGATCAACTTAACGTCCTCACCAACTTT
CCCATAACGTTGTTCAACAAAATTGCTGACATCATCAATGCCATCAATTA
ATCCATGTTTTATAGCATCTTGAGCGAGCCAAATGTCTCCATTAAATAAT
AAATCATCATTTGCATTCAATCGACCACCACGACTTTTCTTTACATGGTC
AATAAAATTTTGGTGAATGGCATTTAAAAGGTACTTAATTTTCAATACAT
CATCCTCTTTCTCTGGTTGAAAAGGATCCATGAAAGATTTGCTTTTGCCT
GCAGTATAGACACGCCAATCTACATCATACTTTTTAATTAATTCGTCAAA
ACCAAACTTTGCATTTATAACTCCAATGCTACCAATAAAGGAGTTATTAG
TTGCATAGATTTCGTGACCAGCGCATGCAAGCCAGTATCCACCAGAAGCT
GCTAGGTCTTCTACAAAGGAGTAAACTTTCACATTCTTTTGCTTTCCTAA
TCGTGTAATCTTATTTGCAATTAGCTCAGATTGTTCAGGTGACCCCCCAG
GGCTGTTGATATTAAGCAACACTGATTTcagttttttgtaagaaaatgcT
TTATCAATTGACTTTTCCAAATTCGCAATATTCAATCTTCGACTTGCACC
AAGGCCACCTCCTCTCCATGCTTGTACCAGCCAAATCAATGACAGCAACC
TCAGGCTTTGACTTCATAAaatttggcaataatttcatTTGGGAGTTTGC
AGACAAAGAAAGCAAACGGATGCTCTGTTTTGTGAGATTTTTGTTGAGGC
TCTTGTTGATTGAGGTCATCATTATTTTTAGTCTTTTGCTTATTTGGAGT
GAAGTGTCAAGAAATAAAGATAAAGGTGAAATACTATGAATGATAATTTT
CTTAAATGGGAAAAGACTGCACAGGCTGCACCAGGTTCGCTTAACAAATT
TAGTCTAGTAGATCAAAATTTGTAGTTAAaaaaatggacctttaaaaagg
ttctagatca Run BLAST on NCBI transcript from alignment at sc0000075:719348..720793+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007277 ID=TCONS_00007277|Name=TCONS_00007277|organism=Clytia hemisphaerica|type=transcript|length=1446bp|location=Sequence derived from alignment at sc0000075:719348..720793+ (Clytia hemisphaerica)
NNATTTTGGAATTAGGGTTCTTGATTTCAGAAAAGTTCTAGTTTTGAAGG
TTTAAAAATCTGTTCAGATCATAAAACATTATTAATTCCATtaagtctTT
ACCAAACAAAATAGCACACAAAActaattcatttaaaaaattacatcACA
TTACATCAAATCTTTTACTAAAGAGATCTTTTTGAATGTCCAGAGGAGTA
GTCAGACCTCCAAACATACCACCTAACCCAAACCTGTTGGCACTTGGTGA
ATTCACTCTGACCAGCTTAACATCCTCACCAACTTTCCCATAACGTTGTT
CAACAAAATTGCANATTCACTCTGATCAACTTAACGTCCTCACCAACTTT
CCCATAACGTTGTTCAACAAAATTGCTGACATCATCAATGCCATCAATTA
ATCCATGTTTTATAGCATCTTGAGCGAGCCAAATGTCTCCATTAAATAAT
AAATCATCATTTGCATTCAATCGACCACCACGACTTTTCTTTACATGGTC
AATAAAATTTTGGTGAATGGCATTTAAAAGGTACTTAATTTTCAATACAT
CATCCTCTTTCTCTGGTTGAAAAGGATCCATGAAAGATTTGCTTTTGCCT
GCAGTATAGACACGCCAATCTACATCATACTTTTTAATTAATTCGTCAAA
ACCAAACTTTGCATTTATAACTCCAATGCTACCAATAAAGGAGTTATTAG
TTGCATAGATTTCGTGACCAGCGCATGCAAGCCAGTATCCACCAGAAGCT
GCTAGGTCTTCTACAAAGGAGTAAACTTTCACATTCTTTTGCTTTCCTAA
TCGTGNCTCCAATGCTACCAATAAAGGAGTTATTAGTTGCATAGATTTCC
TGACCAGCGCATGCAAGCCAGTATCCACCAGAAGCTGCTAGGTCTTCCAC
AAAGGAGTAAACTTTCACATTCTTTTGCTTTCCTAATCGTGTAATCTTAT
TTGCAATTAGCTCAGATTGTTCAGGTGACCCCCCAGGGCTGTTGATATTA
AGCAACACTGATTTcagttttttgtaagaaaatgcTTTATCAATTGACTT
TTCCAAATTCGCAATATTCAATCTTCGACTTGCACCAAGGCCACCTCCTC
TCCATGCTTGTACCAGCCAAATCAATGACAGCAACCTCAGGCTTTGACTT
CATAAaatttggcaataatttcatTTGGGAGTTTGCAGACAAAGAAAGCA
AACGGATGCTCTGTTTTGTGAGATTTTTGTTGAGGCTCTTGTTGATTGAG
GTCATCATTATTTTTAGTCTTTTGCTTATTTGGAGTGAAGTGTCAAGAAA
TAAAGATAAAGGTGAAATACTATGAATGATAATTTTCTTAAATGGGAAAA
GACTGCACAGGCTGCACCAGGTTCGCTTAACAAATTTAGTCTAGTAGATC
AAAATTTGTAGTTAAaaaaatggacctttaaaaaggttctagatca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007277-exon-sc0000075-1491911889:719348..720129 | TCONS_00007277-exon-sc0000075-1491911889:719348..720129 | Clytia hemisphaerica | exon |
| TCONS_00007277-exon-sc0000075-1510915933:719348..720129 | TCONS_00007277-exon-sc0000075-1510915933:719348..720129 | Clytia hemisphaerica | exon |
| TCONS_00007277-exon-sc0000075-1575043694:719348..720129 | TCONS_00007277-exon-sc0000075-1575043694:719348..720129 | Clytia hemisphaerica | exon |
| TCONS_00007277-exon-sc0000075-1491911889:720266..720793 | TCONS_00007277-exon-sc0000075-1491911889:720266..720793 | Clytia hemisphaerica | exon |
| TCONS_00007277-exon-sc0000075-1510915933:720266..720793 | TCONS_00007277-exon-sc0000075-1510915933:720266..720793 | Clytia hemisphaerica | exon |
| TCONS_00007277-exon-sc0000075-1575043694:720266..720793 | TCONS_00007277-exon-sc0000075-1575043694:720266..720793 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000075 | supercontig | sc0000075:719348..720793 + |
Blast
The following BLAST results are available for this feature:
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