TCONS_00007215 (transcript) - C. hemisphaerica

Overview
NameTCONS_00007215
Unique NameTCONS_00007215
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length276

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00007215 ID=TCONS_00007215|Name=TCONS_00007215|organism=Clytia hemisphaerica|type=transcript|length=276bp
NTGATGACATTTTTAGCTCTTTAATGTCATTCTTCTCAACTAAGAAAGCT
TGAGCTAGGTGAAACCAAAGACTTGATTCTCAAACTCAACGTTTTCGATA
TGAACTTATAGTTTGACGACACCGAAAAACTTTTATTGAAGGACGAAGAC
CAAAGGCATATTAAATGATATATCTATTTAAAGATCCAAGTGTTAAAGGA
ATTGAAAGCCTGGAGGCTGGTTTAACAATTGTGTGTGATGAATTATTGAA
GGTCTGGGGCGCTCCCTCCGCCCTCT
Run BLAST on NCBI

transcript from alignment at sc0000074:112684..112959

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00007215 ID=TCONS_00007215|Name=TCONS_00007215|organism=Clytia hemisphaerica|type=transcript|length=276bp|location=Sequence derived from alignment at sc0000074:112684..112959 (Clytia hemisphaerica)
AGAGGGCGGAGGGAGCGCCCCAGACCTTCAATAATTCATCACACACAATT
GTTAAACCAGCCTCCAGGCTTTCAATTCCTTTAACACTTGGATCTTTAAA
TAGATATATCATTTAATATGCCTTTGGTCTTCGTCCTTCAATAAAAGTTT
TTCGGTGTCGTCAAACTATAAGTTCATATCGAAAACGTTGAGTTTGAGAA
TCAAGTCTTTGGTTTCACCTAGCTCAAGCTTTCTTAGTTGAGAAGAATGA
CATTAAAGAGCTAAAAATGTCATCAN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_004046XLOC_004046Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00007215-exon-sc0000074-1491911889:112684..112959TCONS_00007215-exon-sc0000074-1491911889:112684..112959Clytia hemisphaericaexon
TCONS_00007215-exon-sc0000074-1510915933:112684..112959TCONS_00007215-exon-sc0000074-1510915933:112684..112959Clytia hemisphaericaexon
TCONS_00007215-exon-sc0000074-1575043694:112684..112959TCONS_00007215-exon-sc0000074-1575043694:112684..112959Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000074supercontigsc0000074:112684..112959 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.964342	4.07292	6.02291	0	12.4804	6.91765	6.34141	16.3543	26.8729	24.8328	39.9464	14.1991	23.1252	15.6797	8.80448	13.3775	1.86228	9.68095	12.9008	35.1355	11.4237	14.9063	12.8707	9.62486	3.95195	7.98624	43.4963	32.8836	58.1004	38.4356
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00007215 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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