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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007132 ID=TCONS_00007132|Name=TCONS_00007132|organism=Clytia hemisphaerica|type=transcript|length=3348bp
agcgTCTGTTAATTGGTGGTTCTACTGTATTTGGGTGCTTCCGAAAGTGG
ATTTGGAGATAGATTGACGTCAATCGGTTTGTTGAAATGATCATAGAAAT
ATAGTTTTAGTTTACCTGCATGACatattgtttctttctttttctttaaa
cgTGGATTGAAATACAGATTTGTTCCCTGCAAGAGGTCTCGTTTCTGGTT
TTGTATTTTTCCCACAACCGTAAAGTTTGATCACTGTTTCAAAATAGCTA
AATACTTGCTTTAACCATCACTTGACTTCTGAATGATTGATTTCCAACGG
GGACGAAACttttttttcgtattttggCTTGTGGTATGGTGGGTTGGTTC
ATCATACAAGGATGAATACAAGTAGCTTACACTAAGCGGTTCTCAACAGG
ATAAATTGCTGTGTTGGCTCCGGAACGAGTTAGACGTTATATTTGGGTTA
CTTCAACATGAActtctttttcacatttttcgacAACTTCTTCTTTCCAA
GCAAGCCGACCCCTTGTTGatcttcccagctggcacacaacgttgtgtTA
ACGTTcgaataacgttatttggacgttatgaatgtcaaatggacgttgtt
ttgacgttgtgtgccgacACTTTCCTTATCAACCATCAATGCTTTAGCAA
GACAGTCGACCTTTCTTTAGTCTGGTATGCTGCAACTATCTGTACAATCA
TCATTGTTTCTTTCTTGATCATTGTCACTTGTTTCTTTCTTGAATGTATT
GATCGGTGCTTCTTCTTCATCCACCTCATCTTCTCACATTGTCCAAAAGC
CTGTTTCTCTTGACCATCTTCATTTGCCTCGCTCGGTTTTTGGATCGATC
GACCACATATTTACCATTTACAGTGTAGTTGATGGATCTTTATGATGAAT
GTATCTCTCTGTtaataacccagctggcacacaacgttgttttaacgttc
ttctaacgttatatggacgttgtgaacgttgtacggacgttgaaataacg
ttgtgtgccggctgggaagGATGTACGTTTTCCACTGGAATGACGAAGTT
CGTACATCCCTCACTACTAACCGTGTATTATGATATTTAAAATTTCCGAA
GAAACTGAAATGAGAATTGTACTGAGAAATAACCCTGGGTGTCGAGTTTC
AAATAACGGGTTCAATAAATCCTGTAATATAAACAACCAGGCTATCGGTT
TGATTCAAGTCCTTaggatttttaaaagaaagagacTTGAATTACTCGAC
TTCTCTGCTTAATCCACATGGATCCTTGCGCAAGCTCTTTCAGTCTTCCT
CTATCGTTGGCCAGTCGTTTTGCTGTCAGCAGTGGAATGCCAGTGTCTTC
CCGGATTAAAtcataataataacaataataataataataataacgatATA
TTTCACAGTATCTCCAAAGTTTTACAATTGGCTCTTCACCTGGAAATTGA
GTATGATAAATATATATGTAGCGTATAAAAAATNGATAAATATATATGTA
GCGAATGAAAAATATGATGTTCATTAAAAATACTGAGACCGGTTGTAACT
ATAGACTAGAAGGCTAAAAGTTGGTAAAGCCAAGTACGTTCGATCAAATA
CCGTTGTAGAGTGATATGAGCTTGGCAAAAGTAGAATGAGTGAACGTAGT
GCTAGTGGCTTGTGCAAGACCTGTGTAAAACCAAAGTTTGAATTTAGATT
AAGCTATAAAATACTACAAAATTGATACAACTATTGACCAGGACGCTAGG
TAGGCTGTTAGATCTAGGAAATTAGTAGAGTAAATACGATTGACGAGGGG
TGTAAGAGTGACACAAGAGTATGAGTTGGAATTGCAGAATGTCCAGGAGT
AGtaaatataaaatatcattAGAATAACTCAAAactaattaaaatcaaat
aattaaaCAAATAGGGGATAGTTGCTCTAAAGAATAATGAACGGAGTGTA
ACTACTGCTACTGGCTACGGAATAGGGATAAGTTAATCAATACGATGGAA
AATGACTAAGAGATACAAGGCGTTAAAGGATTTGGAGTTAGATGTGGCAA
CGTCCCAGCTAAAAACGATaagcaatataaaaaaaatactaaataatgaa
atatttatttaaagTGAGAAAGTATGTTGTTATATTTGACGATCGTAAAG
TATAGCAGAGTTGGTTATCACAAGGTTAAAACTCTCGCAAGTCTATTGTT
AAGTTATCAAAAGGATAGTTATTGTTAAATTGGAATCAAGTCATGAGCAG
AGTAAAATCCCAAGGAAATAGCTGGTCTTTGAGATTCAAGACATGAAAAT
ACTTTAAATTCATACAAGGCTCCTAGCGAGACCTTGATCCAAAAAATGCC
TTTTAGTTTCACTACAAAATATGTTATAATCTAATTCATCCCGACATTTT
TGGGGAAGTCCATTGAATATACGCGAAGAGTCGTATTCAAAACTACCCAT
AATAATATTCGGACAAGCCAACATTGTGCCAGCGTGAACAGGGTTTCTCA
AACCTTCTCGAGGTGTCATTTTTTCCGTCGGAAGGAAAGTTGGCCAGTTA
TTAGAGTTAATGGATTTCCATGCAAGTTTAGCCATGCTAAATTCTGCTCT
CTCGCgtattggtagccatttcagcGAGATCACGTCTGATACGTTTGAGT
AGCGGCCTCTCACGAAACTGGCGGTTGcgttttgtatccgctgcatccGC
TGGATGAGGTACGATGGTGCGTCGATGAAAAGAGCATTGCCGTAGTCGAG
CTGGCTCAATACAAGCGATTCTGCAAGCTGCTTCCGTAGATGGTAAGGTA
GGTAGCGCTTGATACGACAAAGTGACTTGAGTGTACCATATGCTTTAGAC
GTGGCTTTTTTTATATGAGCGTTCCATTTCATATCCTCACTAAACGTTAT
ACCGAggagtttgaatgttttgacaCGTTCGATGGTTTTTTCGTCAAGCG
AAATCACGCTAACTTTTAGGTGAACGTTCTATTGGTCGTTTTCCTGTGAA
GTCCGACTTCTTGACGTATAGCTGGCGTCGGCTTTTCTCATGGATACATG
ACCAAACCAGTTATCGTCCTTATTTTCCCGATGTCAACGATATTAGTACG
GAATCCTAGCGTTCCTTTTAAATCTGGAACGTTGGTTCCGTCTATCCTTC
TTTTGTCAGCTTTCCTTTCTTTCCTGATTTTCAAACCGCACTTTTTATAC
CGTGGATAGCTTTCTTTAGTTTTTAAACGATCATAGCTATCAGTGTTGTG
TTGTAATAGCGAATATCAATTGACAAGGTATGATCAAAGGTTGTGGCTAT
TATTTTTCGGAAGTTTGTTAATTTTGACATCAAACTGTATAGTCTAAT Run BLAST on NCBI protein sequence of TCONS_00007132-protein >TCONS_00007132-protein ID=TCONS_00007132-protein|Name=TCONS_00007132-protein|organism=Clytia hemisphaerica|type=polypeptide|length=190bp
MKWNAHIKKATSKAYGTLKSLCRIKRYLPYHLRKQLAESLVLSQLDYGNA
LFIDAPSYLIQRMQRIQNATASFVRGRYSNVSDVISLKWLPIRERAEFSM
AKLAWKSINSNNWPTFLPTEKMTPREGLRNPVHAGTMLACPNIIMGSFEY
DSSRIFNGLPQKCRDELDYNIFCSETKRHFLDQGLARSLV Run BLAST on NCBI transcript from alignment at sc0000073:713878..717225 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007132 ID=TCONS_00007132|Name=TCONS_00007132|organism=Clytia hemisphaerica|type=transcript|length=3348bp|location=Sequence derived from alignment at sc0000073:713878..717225 (Clytia hemisphaerica)
ATTAGACTATACAGTTTGATGTCAAAATTAACAAACTTCCGAAAAATAAT
AGCCACAACCTTTGATCATACCTTGTCAATTGATATTCGCTATTACAACA
CAACACTGATAGCTATGATCGTTTAAAAACTAAAGAAAGCTATCCACGGT
ATAAAAAGTGCGGTTTGAAAATCAGGAAAGAAAGGAAAGCTGACAAAAGA
AGGATAGACGGAACCAACGTTCCAGATTTAAAAGGAACGCTAGGATTCCG
TACTAATATCGTTGACATCGGGAAAATAAGGACGATAACTGGTTTGGTCA
TGTATCCATGAGAAAAGCCGACGCCAGCTATACGTCAAGAAGTCGGACTT
CACAGGAAAACGACCAATAGAACGTTCACCTAAAAGTTAGCGTGATTTCG
CTTGACGAAAAAACCATCGAACGtgtcaaaacattcaaactccTCGGTAT
AACGTTTAGTGAGGATATGAAATGGAACGCTCATATAAAAAAAGCCACGT
CTAAAGCATATGGTACACTCAAGTCACTTTGTCGTATCAAGCGCTACCTA
CCTTACCATCTACGGAAGCAGCTTGCAGAATCGCTTGTATTGAGCCAGCT
CGACTACGGCAATGCTCTTTTCATCGACGCACCATCGTACCTCATCCAGC
ggatgcagcggatacaaaacgCAACCGCCAGTTTCGTGAGAGGCCGCTAC
TCAAACGTATCAGACGTGATCTCgctgaaatggctaccaatacGCGAGAG
AGCAGAATTTAGCATGGCTAAACTTGCATGGAAATCCATTAACTCTAATA
ACTGGCCAACTTTCCTTCCGACGGAAAAAATGACACCTCGAGAAGGTTTG
AGAAACCCTGTTCACGCTGGCACAATGTTGGCTTGTCCGAATATTATTAT
GGGTAGTTTTGAATACGACTCTTCGCGTATATTCAATGGACTTCCCCAAA
AATGTCGGGATGAATTAGATTATAACATATTTTGTAGTGAAACTAAAAGG
CATTTTTTGGATCAAGGTCTCGCTAGGAGCCTTGTATGAATTTAAAGTAT
TTTCATGTCTTGAATCTCAAAGACCAGCTATTTCCTTGGGATTTTACTCT
GCTCATGACTTGATTCCAATTTAACAATAACTATCCTTTTGATAACTTAA
CAATAGACTTGCGAGAGTTTTAACCTTGTGATAACCAACTCTGCTATACT
TTACGATCGTCAAATATAACAACATACTTTCTCActttaaataaatattt
cattatttagtattttttttatattgcttATCGTTTTTAGCTGGGACGTT
GCCACATCTAACTCCAAATCCTTTAACGCCTTGTATCTCTTAGTCATTTT
CCATCGTATTGATTAACTTATCCCTATTCCGTAGCCAGTAGCAGTAGTTA
CACTCCGTTCATTATTCTTTAGAGCAACTATCCCCTATTTGtttaattat
ttgattttaattagtTTTGAGTTATTCTaatgatattttatatttaCTAC
TCCTGGACATTCTGCAATTCCAACTCATACTCTTGTGTCACTCTTACACC
CCTCGTCAATCGTATTTACTCTACTAATTTCCTAGATCTAACAGCCTACC
TAGCGTCCTGGTCAATAGTTGTATCAATTTTGTAGTATTTTATAGCTTAA
TCTAAATTCAAACTTTGGTTTTACACAGGTCTTGCACAAGCCACTAGCAC
TACGTTCACTCATTCTACTTTTGCCAAGCTCATATCACTCTACAACGGTA
TTTGATCGAACGTACTTGGCTTTACCAACTTTTAGCCTTCTAGTCTATAG
TTACAACCGGTCTCAGTATTTTTAATGAACATCATATTTTTCATTCGCTA
CATATATATTTATCNATTTTTTATACGCTACATATATATTTATCATACTC
AATTTCCAGGTGAAGAGCCAATTGTAAAACTTTGGAGATACTGTGAAATA
TatcgttattattattattattattgttattattatgaTTTAATCCGGGA
AGACACTGGCATTCCACTGCTGACAGCAAAACGACTGGCCAACGATAGAG
GAAGACTGAAAGAGCTTGCGCAAGGATCCATGTGGATTAAGCAGAGAAGT
CGAGTAATTCAAgtctctttcttttaaaaatcctAAGGACTTGAATCAAA
CCGATAGCCTGGTTGTTTATATTACAGGATTTATTGAACCCGTTATTTGA
AACTCGACACCCAGGGTTATTTCTCAGTACAATTCTCATTTCAGTTTCTT
CGGAAATTTTAAATATCATAATACACGGTTAGTAGTGAGGGATGTACGAA
CTTCGTCATTCCAGTGGAAAACGTACATCcttcccagccggcacacaacg
ttatttcaacgtccgtacaacgttcacaacgtccatataacgttagaaga
acgttaaaacaacgttgtgtgccagctgggttattaACAGAGAGATACAT
TCATCATAAAGATCCATCAACTACACTGTAAATGGTAAATATGTGGTCGA
TCGATCCAAAAACCGAGCGAGGCAAATGAAGATGGTCAAGAGAAACAGGC
TTTTGGACAATGTGAGAAGATGAGGTGGATGAAGAAGAAGCACCGATCAA
TACATTCAAGAAAGAAACAAGTGACAATGATCAAGAAAGAAACAATGATG
ATTGTACAGATAGTTGCAGCATACCAGACTAAAGAAAGGTCGACTGTCTT
GCTAAAGCATTGATGGTTGATAAGGAAAGTgtcggcacacaacgtcaaaa
caacgtccatttgacattcataacgtccaaataacgttattcgAACGTTA
acacaacgttgtgtgccagctgggaagatCAACAAGGGGTCGGCTTGCTT
GGAAAGAAGAAGTTgtcgaaaaatgtgaaaaagaagTTCATGTTGAAGTA
ACCCAAATATAACGTCTAACTCGTTCCGGAGCCAACACAGCAATTTATCC
TGTTGAGAACCGCTTAGTGTAAGCTACTTGTATTCATCCTTGTATGATGA
ACCAACCCACCATACCACAAGccaaaatacgaaaaaaaaGTTTCGTCCCC
GTTGGAAATCAATCATTCAGAAGTCAAGTGATGGTTAAAGCAAGTATTTA
GCTATTTTGAAACAGTGATCAAACTTTACGGTTGTGGGAAAAATACAAAA
CCAGAAACGAGACCTCTTGCAGGGAACAAATCTGTATTTCAATCCAcgtt
taaagaaaaagaaagaaacaatatGTCATGCAGGTAAACTAAAACTATAT
TTCTATGATCATTTCAACAAACCGATTGACGTCAATCTATCTCCAAATCC
ACTTTCGGAAGCACCCAAATACAGTAGAACCACCAATTAACAGAcgct Coding sequence (CDS) from alignment at sc0000073:713878..717225 >TCONS_00007132 ID=TCONS_00007132|Name=TCONS_00007132|organism=Clytia hemisphaerica|type=CDS|length=573bp|location=Sequence derived from alignment at sc0000073:713878..717225 (Clytia hemisphaerica)
ATGAAATGGAACGCTCATATAAAAAAAGCCACGTCTAAAGCATATGGTAC
ACTCAAGTCACTTTGTCGTATCAAGCGCTACCTACCTTACCATCTACGGA
AGCAGCTTGCAGAATCGCTTGTATTGAGCCAGCTCGACTACGGCAATGCT
CTTTTCATCGACGCACCATCGTACCTCATCCAGCggatgcagcggataca
aaacgCAACCGCCAGTTTCGTGAGAGGCCGCTACTCAAACGTATCAGACG
TGATCTCgctgaaatggctaccaatacGCGAGAGAGCAGAATTTAGCATG
GCTAAACTTGCATGGAAATCCATTAACTCTAATAACTGGCCAACTTTCCT
TCCGACGGAAAAAATGACACCTCGAGAAGGTTTGAGAAACCCTGTTCACG
CTGGCACAATGTTGGCTTGTCCGAATATTATTATGGGTAGTTTTGAATAC
GACTCTTCGCGTATATTCAATGGACTTCCCCAAAAATGTCGGGATGAATT
AGATTATAACATATTTTGTAGTGAAACTAAAAGGCATTTTTTGGATCAAG
GTCTCGCTAGGAGCCTTGTATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007132-exon-sc0000073-1491911889:713878..717225 | TCONS_00007132-exon-sc0000073-1491911889:713878..717225 | Clytia hemisphaerica | exon |
| TCONS_00007132-exon-sc0000073-1510915933:713878..717225 | TCONS_00007132-exon-sc0000073-1510915933:713878..717225 | Clytia hemisphaerica | exon |
| TCONS_00007132-exon-sc0000073-1575043694:713878..717225 | TCONS_00007132-exon-sc0000073-1575043694:713878..717225 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000073 | supercontig | sc0000073:713878..717225 . |
Blast
The following BLAST results are available for this feature:
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