XLOC_004000 (gene) - C. hemisphaerica

Overview
NameXLOC_004000
Unique NameXLOC_004000
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000073:713878..717225-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004000 ID=XLOC_004000|Name=XLOC_004000|organism=Clytia hemisphaerica|type=gene|length=3348bp|location=Sequence derived from alignment at sc0000073:713878..717225- (Clytia hemisphaerica)
AGCGTCTGTTAATTGGTGGTTCTACTGTATTTGGGTGCTTCCGAAAGTGG
ATTTGGAGATAGATTGACGTCAATCGGTTTGTTGAAATGATCATAGAAAT
ATAGTTTTAGTTTACCTGCATGACATATTGTTTCTTTCTTTTTCTTTAAA
CGTGGATTGAAATACAGATTTGTTCCCTGCAAGAGGTCTCGTTTCTGGTT
TTGTATTTTTCCCACAACCGTAAAGTTTGATCACTGTTTCAAAATAGCTA
AATACTTGCTTTAACCATCACTTGACTTCTGAATGATTGATTTCCAACGG
GGACGAAACTTTTTTTTCGTATTTTGGCTTGTGGTATGGTGGGTTGGTTC
ATCATACAAGGATGAATACAAGTAGCTTACACTAAGCGGTTCTCAACAGG
ATAAATTGCTGTGTTGGCTCCGGAACGAGTTAGACGTTATATTTGGGTTA
CTTCAACATGAACTTCTTTTTCACATTTTTCGACAACTTCTTCTTTCCAA
GCAAGCCGACCCCTTGTTGATCTTCCCAGCTGGCACACAACGTTGTGTTA
ACGTTCGAATAACGTTATTTGGACGTTATGAATGTCAAATGGACGTTGTT
TTGACGTTGTGTGCCGACACTTTCCTTATCAACCATCAATGCTTTAGCAA
GACAGTCGACCTTTCTTTAGTCTGGTATGCTGCAACTATCTGTACAATCA
TCATTGTTTCTTTCTTGATCATTGTCACTTGTTTCTTTCTTGAATGTATT
GATCGGTGCTTCTTCTTCATCCACCTCATCTTCTCACATTGTCCAAAAGC
CTGTTTCTCTTGACCATCTTCATTTGCCTCGCTCGGTTTTTGGATCGATC
GACCACATATTTACCATTTACAGTGTAGTTGATGGATCTTTATGATGAAT
GTATCTCTCTGTTAATAACCCAGCTGGCACACAACGTTGTTTTAACGTTC
TTCTAACGTTATATGGACGTTGTGAACGTTGTACGGACGTTGAAATAACG
TTGTGTGCCGGCTGGGAAGGATGTACGTTTTCCACTGGAATGACGAAGTT
CGTACATCCCTCACTACTAACCGTGTATTATGATATTTAAAATTTCCGAA
GAAACTGAAATGAGAATTGTACTGAGAAATAACCCTGGGTGTCGAGTTTC
AAATAACGGGTTCAATAAATCCTGTAATATAAACAACCAGGCTATCGGTT
TGATTCAAGTCCTTAGGATTTTTAAAAGAAAGAGACTTGAATTACTCGAC
TTCTCTGCTTAATCCACATGGATCCTTGCGCAAGCTCTTTCAGTCTTCCT
CTATCGTTGGCCAGTCGTTTTGCTGTCAGCAGTGGAATGCCAGTGTCTTC
CCGGATTAAATCATAATAATAACAATAATAATAATAATAATAACGATATA
TTTCACAGTATCTCCAAAGTTTTACAATTGGCTCTTCACCTGGAAATTGA
GTATGATAAATATATATGTAGCGTATAAAAAATNGATAAATATATATGTA
GCGAATGAAAAATATGATGTTCATTAAAAATACTGAGACCGGTTGTAACT
ATAGACTAGAAGGCTAAAAGTTGGTAAAGCCAAGTACGTTCGATCAAATA
CCGTTGTAGAGTGATATGAGCTTGGCAAAAGTAGAATGAGTGAACGTAGT
GCTAGTGGCTTGTGCAAGACCTGTGTAAAACCAAAGTTTGAATTTAGATT
AAGCTATAAAATACTACAAAATTGATACAACTATTGACCAGGACGCTAGG
TAGGCTGTTAGATCTAGGAAATTAGTAGAGTAAATACGATTGACGAGGGG
TGTAAGAGTGACACAAGAGTATGAGTTGGAATTGCAGAATGTCCAGGAGT
AGTAAATATAAAATATCATTAGAATAACTCAAAACTAATTAAAATCAAAT
AATTAAACAAATAGGGGATAGTTGCTCTAAAGAATAATGAACGGAGTGTA
ACTACTGCTACTGGCTACGGAATAGGGATAAGTTAATCAATACGATGGAA
AATGACTAAGAGATACAAGGCGTTAAAGGATTTGGAGTTAGATGTGGCAA
CGTCCCAGCTAAAAACGATAAGCAATATAAAAAAAATACTAAATAATGAA
ATATTTATTTAAAGTGAGAAAGTATGTTGTTATATTTGACGATCGTAAAG
TATAGCAGAGTTGGTTATCACAAGGTTAAAACTCTCGCAAGTCTATTGTT
AAGTTATCAAAAGGATAGTTATTGTTAAATTGGAATCAAGTCATGAGCAG
AGTAAAATCCCAAGGAAATAGCTGGTCTTTGAGATTCAAGACATGAAAAT
ACTTTAAATTCATACAAGGCTCCTAGCGAGACCTTGATCCAAAAAATGCC
TTTTAGTTTCACTACAAAATATGTTATAATCTAATTCATCCCGACATTTT
TGGGGAAGTCCATTGAATATACGCGAAGAGTCGTATTCAAAACTACCCAT
AATAATATTCGGACAAGCCAACATTGTGCCAGCGTGAACAGGGTTTCTCA
AACCTTCTCGAGGTGTCATTTTTTCCGTCGGAAGGAAAGTTGGCCAGTTA
TTAGAGTTAATGGATTTCCATGCAAGTTTAGCCATGCTAAATTCTGCTCT
CTCGCGTATTGGTAGCCATTTCAGCGAGATCACGTCTGATACGTTTGAGT
AGCGGCCTCTCACGAAACTGGCGGTTGCGTTTTGTATCCGCTGCATCCGC
TGGATGAGGTACGATGGTGCGTCGATGAAAAGAGCATTGCCGTAGTCGAG
CTGGCTCAATACAAGCGATTCTGCAAGCTGCTTCCGTAGATGGTAAGGTA
GGTAGCGCTTGATACGACAAAGTGACTTGAGTGTACCATATGCTTTAGAC
GTGGCTTTTTTTATATGAGCGTTCCATTTCATATCCTCACTAAACGTTAT
ACCGAGGAGTTTGAATGTTTTGACACGTTCGATGGTTTTTTCGTCAAGCG
AAATCACGCTAACTTTTAGGTGAACGTTCTATTGGTCGTTTTCCTGTGAA
GTCCGACTTCTTGACGTATAGCTGGCGTCGGCTTTTCTCATGGATACATG
ACCAAACCAGTTATCGTCCTTATTTTCCCGATGTCAACGATATTAGTACG
GAATCCTAGCGTTCCTTTTAAATCTGGAACGTTGGTTCCGTCTATCCTTC
TTTTGTCAGCTTTCCTTTCTTTCCTGATTTTCAAACCGCACTTTTTATAC
CGTGGATAGCTTTCTTTAGTTTTTAAACGATCATAGCTATCAGTGTTGTG
TTGTAATAGCGAATATCAATTGACAAGGTATGATCAAAGGTTGTGGCTAT
TATTTTTCGGAAGTTTGTTAATTTTGACATCAAACTGTATAGTCTAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007132TCONS_00007132Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007132-proteinTCONS_00007132-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000073supercontigsc0000073:713878..717225 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.25	0.98	1.71	1.73	2.37	1.86	1.84	2.3	1.04	1.26	1.15	1.17	2.36	2.04	1.23	1.22	1.35	1.88	2.62	2.6	3.18	2.94	1.05	1.25	2.13	2.48	2.46	2.11	2.72	2.85