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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00007006 ID=TCONS_00007006|Name=TCONS_00007006|organism=Clytia hemisphaerica|type=transcript|length=187bp
CTCGAATTCATGGAAGAGACGGATGTTGATGGGATGAAAGAAGCTTTGAA
TAAAGCatcatttttctttccttttatgTTGACAAACTTGGTGACTACAT
TTGCAAGATTTATTACATCACGATCAACGTTACACGTGGTGTGTTTTATG
TGTCAATGCCTCTGTGCAAACACGTCTTTTGCGTCNN Run BLAST on NCBI transcript from alignment at sc0000073:49556..51784+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00007006 ID=TCONS_00007006|Name=TCONS_00007006|organism=Clytia hemisphaerica|type=transcript|length=2229bp|location=Sequence derived from alignment at sc0000073:49556..51784+ (Clytia hemisphaerica)
CTCGAATTCATGGAAGAGACGGATGTTGATGGGATGAAAGAAGCTTTGAA
TAAAGGTAAGAGATTACTAGAGACTCGTATTCAACATATTAGAATCGCCG
ACACATATGGGTGGCTTACTGTCAACGAATTTAAGGCAAGCGATCTTACA
TCCGGAGACGTGGAGGAAAAGAGGCTTAAGAGGGCTATTAAAAATGCAGA
GCAAGTTAAAGAACGTATATATAAAAAGCCAAGAATAGAGGAACCTGATG
GAGAATACTCCAAGGCAATCAAATCTAGAACTGAACAAAGGAGCCGTATG
GATGAGGTGGTCTGTTATTCATGCAAAAGAGTAGGGCACTACGTCAGCCA
CTGTCCTTTTTCTGAATCTTCGTCACCTTTGGCCCACTCGACAAAATTAA
TGTCCTCATCAACAGCAACAAAAAGTTCGTCGTCCAATTCAAATTCTAAA
TCGTCAAGGGATGGAAAATAActttaacaaaaaatataagatTTCATNAC
TCGACAAAGTTAATGTCCTCACCAACAGCAACAAAAAGTTCGTCGTCCAA
TTCAAATTCTAAATCGTCAAGGGATGGAAAATAACTTTAAcaaaaaatag
aagattttcaGATATTCAGaacaattttttcaacttttgaaatacagtag
CTAATTTACGTTGCgttagttttaaaaattgattaCAATTTTGTCTTGTT
GTAATTAGATTAGTATTAATGAGAGCTGATGATATAAATGTACCTGATCT
TCTATTCTATTTCAACTGTGCCATTTTACCTTCTTTAATAATAAATGTCA
AAAATGGATGATGCAACAAATTATCAAAACTTCTCTCCTTCGTTTTGCTA
ATTTACCTCACTGGGATAAAAGACGATTAATAAATTTTGACGTTATTCAA
GAACTTCAATTTTTGCAAACCAatttaaaaaacgtaaaagcttTTAGAAT
TAAAACCAAACCAGGAATTACGAAGGTCATCTTTTCGGACGCAAGTGGTA
CAGGCTATGGAGGTTACGCGGTCGAAAAGTTAGGAAACATCATAgcaaaa
ggaaatttttgtaGACATGAAATACAACTAGCTCAACTTTTCGTGAAACT
AATAAAACAGCAGATTTGATTTCCAAATCTACCGACACAGATAATTGGTC
TATCGATAATGAGATTTTTAATTATATAATCAAAAACTATGGACAAATTA
CTATCGATCGAATTTCCAATAACCAAAACGCTAAGGCAACTGTTCTAATT
CTCGTGAGTATTACCCAGAAACATCCACGTTCAACGCTGTTTCCTGTAAT
TGGGGAAACAATGAGTTCAACTGGCTTTGTCGTCCAATATCGCTCGTAGG
TAAAACAATTCAGCATCTGAAAAACCGTAGAGGTAAAGgcatactttaat
cgtagaaattttagcgagattaattttagcgcatattagcgagtcaggaa
aatcttgatattttttggatttattttagcgaatcacgatttcaaaacat
ttcgcgtggataaattttagcgaatacttgtccgacaaaaatttcgcgtg
gattaattttagcgagggcaatgattttgaggaaaaaataatgtctttta
atacaaaaatcaaTATAGTCACATGTCTTTGTAACACAATTCTTGACTAA
GAACAGAAAAACTTGGAAATTTGCGCCCATATtactagtttttgaaaaaa
atatgaaaatgataacaaaatgataaaaaatgaagaaaaaacatactgga
tttattttagcgaatcagcttttcgaaaaatttcgcgcggataaatttta
gcgatctgtcaaTTCGGTGCGTTTtaacgagatttattttagcgaaaata
gggaaaactcgctaaaacgctaaaattagtctcgctaaaatttctacgat
taaagtattacttgttccATTGTGGCCTTCTTCTTATTACTGGCTATTGT
TGACATCGAACGGCATAGAATTCGAAGCttttgtgaaaatatttttatta
cttGACCCTTATTATATCAATTATTCAATACAAAATGTATATCAATTATT
CAACACAAAATGTATAACTGACGGATTTGCAAGCTTCTATTCTGTAGCat
catttttctttccttttatgTTGACAAACTTGGTGACTACATTTGCAAGA
TTTATTACATCACGATCAACGTTACACGTGGTGTGTTTTATGTGTCAATG
CCTCTGTGCAAACACGTCTTTTGCGTCNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00007006-exon-sc0000073-1491911889:49556..49610 | TCONS_00007006-exon-sc0000073-1491911889:49556..49610 | Clytia hemisphaerica | exon |
| TCONS_00007006-exon-sc0000073-1510915933:49556..49610 | TCONS_00007006-exon-sc0000073-1510915933:49556..49610 | Clytia hemisphaerica | exon |
| TCONS_00007006-exon-sc0000073-1575043694:49556..49610 | TCONS_00007006-exon-sc0000073-1575043694:49556..49610 | Clytia hemisphaerica | exon |
| TCONS_00007006-exon-sc0000073-1491911889:51653..51784 | TCONS_00007006-exon-sc0000073-1491911889:51653..51784 | Clytia hemisphaerica | exon |
| TCONS_00007006-exon-sc0000073-1510915933:51653..51784 | TCONS_00007006-exon-sc0000073-1510915933:51653..51784 | Clytia hemisphaerica | exon |
| TCONS_00007006-exon-sc0000073-1575043694:51653..51784 | TCONS_00007006-exon-sc0000073-1575043694:51653..51784 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000073 | supercontig | sc0000073:49556..51784 + |
Blast
The following BLAST results are available for this feature:
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