XLOC_003922 (gene) - C. hemisphaerica

Overview
NameXLOC_003922
Unique NameXLOC_003922
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000073:49551..51784+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003922 ID=XLOC_003922|Name=XLOC_003922|organism=Clytia hemisphaerica|type=gene|length=2234bp|location=Sequence derived from alignment at sc0000073:49551..51784+ (Clytia hemisphaerica)
ATACCCTCGAATTCATGGAAGAGACGGATGTTGATGGGATGAAAGAAGCT
TTGAATAAAGGTAAGAGATTACTAGAGACTCGTATTCAACATATTAGAAT
CGCCGACACATATGGGTGGCTTACTGTCAACGAATTTAAGGCAAGCGATC
TTACATCCGGAGACGTGGAGGAAAAGAGGCTTAAGAGGGCTATTAAAAAT
GCAGAGCAAGTTAAAGAACGTATATATAAAAAGCCAAGAATAGAGGAACC
TGATGGAGAATACTCCAAGGCAATCAAATCTAGAACTGAACAAAGGAGCC
GTATGGATGAGGTGGTCTGTTATTCATGCAAAAGAGTAGGGCACTACGTC
AGCCACTGTCCTTTTTCTGAATCTTCGTCACCTTTGGCCCACTCGACAAA
ATTAATGTCCTCATCAACAGCAACAAAAAGTTCGTCGTCCAATTCAAATT
CTAAATCGTCAAGGGATGGAAAATAActttaacaaaaaatataagatTTC
ATNACTCGACAAAGTTAATGTCCTCACCAACAGCAACAAAAAGTTCGTCG
TCCAATTCAAATTCTAAATCGTCAAGGGATGGAAAATAACTTTAAcaaaa
aatagaagattttcaGATATTCAGaacaattttttcaacttttgaaatac
agtagCTAATTTACGTTGCgttagttttaaaaattgattaCAATTTTGTC
TTGTTGTAATTAGATTAGTATTAATGAGAGCTGATGATATAAATGTACCT
GATCTTCTATTCTATTTCAACTGTGCCATTTTACCTTCTTTAATAATAAA
TGTCAAAAATGGATGATGCAACAAATTATCAAAACTTCTCTCCTTCGTTT
TGCTAATTTACCTCACTGGGATAAAAGACGATTAATAAATTTTGACGTTA
TTCAAGAACTTCAATTTTTGCAAACCAatttaaaaaacgtaaaagcttTT
AGAATTAAAACCAAACCAGGAATTACGAAGGTCATCTTTTCGGACGCAAG
TGGTACAGGCTATGGAGGTTACGCGGTCGAAAAGTTAGGAAACATCATAg
caaaaggaaatttttgtaGACATGAAATACAACTAGCTCAACTTTTCGTG
AAACTAATAAAACAGCAGATTTGATTTCCAAATCTACCGACACAGATAAT
TGGTCTATCGATAATGAGATTTTTAATTATATAATCAAAAACTATGGACA
AATTACTATCGATCGAATTTCCAATAACCAAAACGCTAAGGCAACTGTTC
TAATTCTCGTGAGTATTACCCAGAAACATCCACGTTCAACGCTGTTTCCT
GTAATTGGGGAAACAATGAGTTCAACTGGCTTTGTCGTCCAATATCGCTC
GTAGGTAAAACAATTCAGCATCTGAAAAACCGTAGAGGTAAAGgcatact
ttaatcgtagaaattttagcgagattaattttagcgcatattagcgagtc
aggaaaatcttgatattttttggatttattttagcgaatcacgatttcaa
aacatttcgcgtggataaattttagcgaatacttgtccgacaaaaatttc
gcgtggattaattttagcgagggcaatgattttgaggaaaaaataatgtc
ttttaatacaaaaatcaaTATAGTCACATGTCTTTGTAACACAATTCTTG
ACTAAGAACAGAAAAACTTGGAAATTTGCGCCCATATtactagtttttga
aaaaaatatgaaaatgataacaaaatgataaaaaatgaagaaaaaacata
ctggatttattttagcgaatcagcttttcgaaaaatttcgcgcggataaa
ttttagcgatctgtcaaTTCGGTGCGTTTtaacgagatttattttagcga
aaatagggaaaactcgctaaaacgctaaaattagtctcgctaaaatttct
acgattaaagtattacttgttccATTGTGGCCTTCTTCTTATTACTGGCT
ATTGTTGACATCGAACGGCATAGAATTCGAAGCttttgtgaaaatatttt
tattacttGACCCTTATTATATCAATTATTCAATACAAAATGTATATCAA
TTATTCAACACAAAATGTATAACTGACGGATTTGCAAGCTTCTATTCTGT
AGCatcatttttctttccttttatgTTGACAAACTTGGTGACTACATTTG
CAAGATTTATTACATCACGATCAACGTTACACGTGGTGTGTTTTATGTGT
CAATGCCTCTGTGCAAACACGTCTTTTGCGTCNN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007005TCONS_00007005Clytia hemisphaericatranscript
TCONS_00007006TCONS_00007006Clytia hemisphaericatranscript
TCONS_00007007TCONS_00007007Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007005-proteinTCONS_00007005-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000073supercontigsc0000073:49551..51784 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
36.99	33.08	19.22	14.07	6.87	4.03	6.97	4.86	3.66	6.12	7.6	4.24	7.08	4.75	1.77	1.3	1.69	4.07	2.8	3.93	3.75	4.42	37.54	38.65	5.59	7.65	173.34	134.09	26.75	23.06